CmoCh20G005570 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh20G005570
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionBHLH transcription factor
LocationCmo_Chr20 : 2692440 .. 2694011 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCTCTGTTTATAAGTTAACCGATTAATCGCTTTATCTTAATCCATCAATCAATTGCCTCATTCAAAGTACTGTAACGTTTGACATGGAGCACGTCGGGAAGCATTTGATGATGAACATCAATGAGTTTGAGCTTCAAGATTTCATCCATGGCGACAACTTCGATCAATATGTGAATCTGATTCGTGGAGGGAGTGAGAATCCGATATTTGATAACCTCGACCTTGATTTTATGAATGTCGACAATCGCCTCGATCCTAGCGCGGAATACATTCTGGATTCCAATATTGTCATGAATTCTGATCCTAATTCTTTGTTTAGTTCATTGGAGAGTTTCAATAGCATCATGAAAGAAGTTGAAAACGAAGATGAAGACGAAGACGATACTTCTGTTGAGAACTCTTCTGTCACAACGTCGAAGAAATCGAAGGTCGATCGATCCAGAACTTTGATTTCCGAGCGTAGGAGAAGAGGAAGGATGAAGGAAAAGCTTTATGCATTGCGTTCATTGGTTCCAAATATAACTAAGGTATGAGAAATTGATACTCACATTCGAAATTCTATGTTAGGTCAAGTAGGTTAGGTCGGCTAGCAATTTTAAATTAGTTAAAATCAAACATGTTCAATTCTAAATTCAAACCGTGGATAATTTTGAAATCGTTAAAATCTCAAGATCATTCAAGAACAACAAATTCTTCTGATGTTTTTTTTGAATGAAATGGTTAAAGACCGAATTCATGATGTGGAAAAATGCAGATGGATAAGGCTTCCATTGTTGGGGACGCAGTGCTGTACGTGAAAGAGCTACAAGTGCAGGCGAAGAAGCTGAAAGCGGAGATATCAGTTTTGGAATCCTCAATCAACGAAACACAAACGAGTCATCGAGGTCAAAACCACAAGAAGATTGTTCAAACTTCACATTCTGGCCAATTCCTCCCCTGCAAAATAATTCAGGTACATTTCAAGTTGTAAGATCAGATAAAACTTCATGCTCTGGTCTGTGATGAAATTGTGAAGCTAAGCTGTGTTAATAATGTGCAATTTGGGGTGTTTTTTCTTCATCTTTGAAAGCTGGATGTGTTTCAAGTGGAGGAAAGAGGGTTTTATTTGAGGCTGGTCTGCAAAATGGGTGAAAGAGTAGCCATGTCTCTTTACAAGGTTCTTGAATCCCTCACCAGCTTCAGTATTCAAAGCTCCAATTTGGCCTCTGCTTCTGACAGATTCATACTCACAGCTACCATTAATGTAATTACTTTCTTACATACAATCTGATTCTCTTGAGATGAACTTTTTGGTTGCTTCCCAATGGCTCATGCTATGCCATTGTAATCTGTTTTTTGCAGGTGAGAAATTGTGAGATGGACATGAACTTGCCAAATCTGAAGCTTTGGCTTACGGGGGCACTTCTTAACCATGGATTTGAGTTCTAATCACATCTTAATCTCTCTATTTTTCTTCTTCCTTTTCAGTTTAACCCTTTAAACCAATACAGAGATTGTAATTATTTTAATCAGCAACTTTGTATTGTGAAGCCATTTGAATTTTGAATTCTTAGAGATTAAATTTCACCAAA

mRNA sequence

TCCTCTGTTTATAAGTTAACCGATTAATCGCTTTATCTTAATCCATCAATCAATTGCCTCATTCAAAGTACTGTAACGTTTGACATGGAGCACGTCGGGAAGCATTTGATGATGAACATCAATGAGTTTGAGCTTCAAGATTTCATCCATGGCGACAACTTCGATCAATATGTGAATCTGATTCGTGGAGGGAGTGAGAATCCGATATTTGATAACCTCGACCTTGATTTTATGAATGTCGACAATCGCCTCGATCCTAGCGCGGAATACATTCTGGATTCCAATATTGTCATGAATTCTGATCCTAATTCTTTGTTTAGTTCATTGGAGAGTTTCAATAGCATCATGAAAGAAGTTGAAAACGAAGATGAAGACGAAGACGATACTTCTGTTGAGAACTCTTCTGTCACAACGTCGAAGAAATCGAAGGTCGATCGATCCAGAACTTTGATTTCCGAGCGTAGGAGAAGAGGAAGGATGAAGGAAAAGCTTTATGCATTGCGTTCATTGGTTCCAAATATAACTAAGATGGATAAGGCTTCCATTGTTGGGGACGCAGTGCTGTACGTGAAAGAGCTACAAGTGCAGGCGAAGAAGCTGAAAGCGGAGATATCAGTTTTGGAATCCTCAATCAACGAAACACAAACGAGTCATCGAGGTCAAAACCACAAGAAGATTGTTCAAACTTCACATTCTGGCCAATTCCTCCCCTGCAAAATAATTCAGCTGGATGTGTTTCAAGTGGAGGAAAGAGGGTTTTATTTGAGGCTGGTCTGCAAAATGGGTGAAAGAGTAGCCATGTCTCTTTACAAGGTTCTTGAATCCCTCACCAGCTTCAGTATTCAAAGCTCCAATTTGGCCTCTGCTTCTGACAGATTCATACTCACAGCTACCATTAATGTGAGAAATTGTGAGATGGACATGAACTTGCCAAATCTGAAGCTTTGGCTTACGGGGGCACTTCTTAACCATGGATTTGAGTTCTAATCACATCTTAATCTCTCTATTTTTCTTCTTCCTTTTCAGTTTAACCCTTTAAACCAATACAGAGATTGTAATTATTTTAATCAGCAACTTTGTATTGTGAAGCCATTTGAATTTTGAATTCTTAGAGATTAAATTTCACCAAA

Coding sequence (CDS)

ATGGAGCACGTCGGGAAGCATTTGATGATGAACATCAATGAGTTTGAGCTTCAAGATTTCATCCATGGCGACAACTTCGATCAATATGTGAATCTGATTCGTGGAGGGAGTGAGAATCCGATATTTGATAACCTCGACCTTGATTTTATGAATGTCGACAATCGCCTCGATCCTAGCGCGGAATACATTCTGGATTCCAATATTGTCATGAATTCTGATCCTAATTCTTTGTTTAGTTCATTGGAGAGTTTCAATAGCATCATGAAAGAAGTTGAAAACGAAGATGAAGACGAAGACGATACTTCTGTTGAGAACTCTTCTGTCACAACGTCGAAGAAATCGAAGGTCGATCGATCCAGAACTTTGATTTCCGAGCGTAGGAGAAGAGGAAGGATGAAGGAAAAGCTTTATGCATTGCGTTCATTGGTTCCAAATATAACTAAGATGGATAAGGCTTCCATTGTTGGGGACGCAGTGCTGTACGTGAAAGAGCTACAAGTGCAGGCGAAGAAGCTGAAAGCGGAGATATCAGTTTTGGAATCCTCAATCAACGAAACACAAACGAGTCATCGAGGTCAAAACCACAAGAAGATTGTTCAAACTTCACATTCTGGCCAATTCCTCCCCTGCAAAATAATTCAGCTGGATGTGTTTCAAGTGGAGGAAAGAGGGTTTTATTTGAGGCTGGTCTGCAAAATGGGTGAAAGAGTAGCCATGTCTCTTTACAAGGTTCTTGAATCCCTCACCAGCTTCAGTATTCAAAGCTCCAATTTGGCCTCTGCTTCTGACAGATTCATACTCACAGCTACCATTAATGTGAGAAATTGTGAGATGGACATGAACTTGCCAAATCTGAAGCTTTGGCTTACGGGGGCACTTCTTAACCATGGATTTGAGTTCTAA
Homology
[Close]
BLAST of CmoCh20G005570 vs. Swiss-Prot
Match: FIT_ARATH (Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 4.8e-64
Identity = 161/317 (50.79%), Postives = 207/317 (65.30%), Query Frame = 1 

Query: 9   MMNINEFELQDFIHGDNFDQYVNLIRGG----SENPIFDNLDLDFMNVDNRLDPSAEYIL 68
           + NIN+ EL +F+   NFDQ++NLIRG      ENP+   LD D   + N     +   +
Sbjct: 8   LSNINDLELHNFLVDPNFDQFINLIRGDHQTIDENPV---LDFDLGPLQN-----SPCFI 67

Query: 69  DSNIVMNSDPNSLFSSLESFNSIMKE-----------VENEDEDEDDTSVENSSVTTS-- 128
           D N  + +  + LF  L   +S + E              E+++ED    ++SS TT+  
Sbjct: 68  DENQFIPTPVDDLFDELPDLDSNVAESFRSFDGDSVRAGGEEDEEDYNDGDDSSATTTNN 127

Query: 129 ---KKSKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQ 188
              +K+K DRSRTLISERRRRGRMK+KLYALRSLVPNITKMDKASIVGDAVLYV+ELQ Q
Sbjct: 128 DGTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQ 187

Query: 189 AKKLKAEISVLESSINETQTSHRGQNHKKIVQTSHSGQFL----PCKIIQLDVFQVEERG 248
           AKKLK++I+ LE+S+N T      Q H    Q +   + +      KIIQ+DV QVEE+G
Sbjct: 188 AKKLKSDIAGLEASLNSTGGY---QEHAPDAQKTQPFRGINPPASKKIIQMDVIQVEEKG 247

Query: 249 FYLRLVCKMGERVAMSLYKVLESLTSFSIQSSNLASAS-DRFILTATINVRNCEMDMNLP 301
           FY+RLVC  GE VA SLYK LESLTSF +Q+SNL+S S D ++LT T++    E  +NLP
Sbjct: 248 FYVRLVCNKGEGVAPSLYKSLESLTSFQVQNSNLSSPSPDTYLLTYTLDGTCFEQSLNLP 307

[Close]
BLAST of CmoCh20G005570 vs. Swiss-Prot
Match: BH035_ARATH (Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.3e-13
Identity = 67/207 (32.37%), Postives = 108/207 (52.17%), Query Frame = 1 

Query: 91  VENEDEDEDDT---------SVENSSVTTSKKSKVDRSRTLISERRRRGRMKEKLYALRS 150
           ++NED + D +         S ++SS   +  S    S+ ++SER RR ++ ++L+ALRS
Sbjct: 19  LQNEDFEYDRSWPLEEAISGSYDSSSPDGAASSPA--SKNIVSERNRRQKLNQRLFALRS 78

Query: 151 LVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLESSINETQTSHRGQNH------ 210
           +VPNITKMDKASI+ DA+ Y++ LQ + KKL+AEI  LES+   + +  +  +       
Sbjct: 79  VVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTPKSSLSFSKDFDRDLLVPV 138

Query: 211 --KKIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKMGERVAMSLYKVLESLTSFSI 270
             KK+ Q          ++++L V  + ER   + + C       + L +V ESL +  I
Sbjct: 139 TSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVTCNKRTDTMVKLCEVFESL-NLKI 198

Query: 271 QSSNLASASDRFILTATINVRNCEMDM 281
            +SNL S S     T  I     E ++
Sbjct: 199 LTSNLTSFSGMIFHTVFIEADEEEQEV 222

[Close]
BLAST of CmoCh20G005570 vs. Swiss-Prot
Match: AMS_ARATH (Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana GN=AMS PE=1 SV=2)

HSP 1 Score: 73.6 bits (179), Expect = 4.2e-12
Identity = 67/216 (31.02%), Postives = 111/216 (51.39%), Query Frame = 1 

Query: 90  EVENEDEDEDDTSVENSSVTTSKKSKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKM 149
           +  ++ +DEDD   +       K  K  +++ L++ERRRR ++ ++LYALRSLVP ITK+
Sbjct: 290 DCSDQIDDEDDPKYKK------KSGKGSQAKNLMAERRRRKKLNDRLYALRSLVPRITKL 349

Query: 150 DKASIVGDAVLYVKELQVQAKKLKAEISVLESSINETQTSHRGQN----HKKIVQTSHSG 209
           D+ASI+GDA+ YVKELQ +AK+L+ E   LE +      S+R Q     +  +V   H G
Sbjct: 350 DRASILGDAINYVKELQNEAKELQDE---LEENSETEDGSNRPQGGMSLNGTVVTGFHPG 409

Query: 210 QFLPCKI--------------------IQLDVFQVEERGFYLRLVCKMGERVAMSLYKVL 269
                 +                     Q+DV Q++ R F+++++C   E       +++
Sbjct: 410 LSCNSNVPSVKQDVDLENSNDKGQEMEPQVDVAQLDGREFFVKVIC---EYKPGGFTRLM 469

Query: 270 ESLTSFSIQSSNLASASDRFILTATINVRNCEMDMN 282
           E+L S  ++ +N   A+    L+   NV   E + N
Sbjct: 470 EALDSLGLEVTN---ANTTRYLSLVSNVFKVEKNDN 490

[Close]
BLAST of CmoCh20G005570 vs. Swiss-Prot
Match: BH027_ARATH (Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.6e-11
Identity = 63/209 (30.14%), Postives = 109/209 (52.15%), Query Frame = 1 

Query: 92  ENEDEDEDDTSVENSSVTTSKKSKVD-------RSRTLISERRRRGRMKEKLYALRSLVP 151
           +N++ + D   +E +   + + S  D        S+ ++SER RR ++ ++L+ALRS+VP
Sbjct: 19  QNQELEFDSWPMEEAFSGSGESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVVP 78

Query: 152 NITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLES--------------SINETQTSH 211
           NI+K+DKAS++ D++ Y++EL  Q K L+AEI  LES              +  ET    
Sbjct: 79  NISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELESRSTLLENPVRDYDCNFAETHLQD 138

Query: 212 RGQNH----KKIVQTSHSG--QFLPCKIIQLDVFQVEERGFYLRLVCKMGERVAMSLYKV 271
              N+    KK  Q  +S   Q  P +++++ V  + E+   + + C       + L KV
Sbjct: 139 FSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVTWMGEKTVVVCITCSKKRETMVQLCKV 198

Query: 272 LESLTSFSIQSSNLASASDRFILTATINV 274
           LESL + +I ++N +S + R   T  + V
Sbjct: 199 LESL-NLNILTTNFSSFTSRLSTTLFLQV 226

[Close]
BLAST of CmoCh20G005570 vs. Swiss-Prot
Match: AIB_ARATH (Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana GN=AIB PE=2 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 1.5e-09
Identity = 32/65 (49.23%), Postives = 51/65 (78.46%), Query Frame = 1 

Query: 124 SERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLESSI 183
           +ER+RR ++ ++ YALRS+VPNI+KMDKAS++GDA+ Y+KELQ + K ++ E    + S+
Sbjct: 399 AERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERVGTDKSL 458

Query: 184 NETQT 189
           +E+ T
Sbjct: 459 SESNT 463

[Close]
BLAST of CmoCh20G005570 vs. TrEMBL
Match: A0A061GWC5_THECC (Basic helix-loop-helix protein BHLH20, putative OS=Theobroma cacao GN=TCM_041590 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.2e-74
Identity = 167/297 (56.23%), Postives = 223/297 (75.08%), Query Frame = 1 

Query: 13  NEFELQDFIHGDNFDQYVNLIRGGSENPIFDNLDLDFMN---VDNRL--DPSAEYILDSN 72
           N+FEL DFI   NFDQ+ +LIRG +E+ + D  D D +N   VD ++   P   +  D+ 
Sbjct: 13  NDFELHDFIDDPNFDQFNDLIRGENEDSVAD-FDYDLVNGCFVDKQIRSTPGDAFGFDAT 72

Query: 73  IVMNSDPNSLFSSLESFN-SIMK--EVENEDEDEDDTSVENSSVTT-SKKSKVDRSRTLI 132
             M  DPN ++++L SF+  IMK  E +N+D+DE+ +    +++TT +KK+K+DRSRTLI
Sbjct: 73  SAMVPDPNYIYNALSSFDGDIMKYGEEDNDDDDENSSGTTTTTITTATKKAKLDRSRTLI 132

Query: 133 SERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLESSI 192
           SERRRRGRMKEKLYALRSLVPNITKMDKASI+GDAV YV++LQ+QAKKLKAEI+ LE+S+
Sbjct: 133 SERRRRGRMKEKLYALRSLVPNITKMDKASIIGDAVRYVQDLQMQAKKLKAEIAGLEASL 192

Query: 193 NETQTSHRGQNHKKIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKMGERVAMSLYK 252
             ++      +    +Q + +   +  KI Q+D+FQVEERGFY+RLVC  GE VA+SLYK
Sbjct: 193 AGSERYQEPIDKPVKIQVARNSHPMCKKITQMDMFQVEERGFYIRLVCDKGEGVAVSLYK 252

Query: 253 VLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGALLNHGFEF 301
            LE+LT+F +Q+SNL +AS+RF+LT T+NVR+ E+ MNLPNLKLW+TGALLN GFEF
Sbjct: 253 ALETLTNFKVQNSNLNTASERFVLTFTLNVRDFELSMNLPNLKLWVTGALLNQGFEF 308

[Close]
BLAST of CmoCh20G005570 vs. TrEMBL
Match: B9HQP2_POPTR (Basic helix-loop-helix family protein OS=Populus trichocarpa GN=POPTR_0009s01100g PE=4 SV=2)

HSP 1 Score: 272.7 bits (696), Expect = 5.3e-70
Identity = 169/312 (54.17%), Postives = 216/312 (69.23%), Query Frame = 1 

Query: 14  EFELQDFIHGDNFDQYVNLIRGGSENPIFDNLDLDFMNVDNRLDPSAEYILDSNIV---- 73
           +F+LQDFI   NFD+Y++LIRG +E   FD   ++   VDN+   S     D +++    
Sbjct: 16  QFQLQDFIDEANFDRYIDLIRGENEITAFDCDLINGFLVDNQFGLSTGDKFDCDLINHVP 75

Query: 74  ------MNSDPNSLFSSLESFNSIMKEVENEDEDEDDTSVENSSVTTSKKSKVDRSRTLI 133
                 M  DPN +  +L SF+  M     ED DE+D+S    + TT+KK+K DRSRTLI
Sbjct: 76  THTSSAMEQDPNYVPIALPSFDGDMGLEAEEDTDEEDSS---GTATTTKKTKKDRSRTLI 135

Query: 134 SERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLE--- 193
           SERRRRGRMKEKLYALRSLVPNITKMDKASI+GDAVLYV+ELQ+QA KLKA+I+ LE   
Sbjct: 136 SERRRRGRMKEKLYALRSLVPNITKMDKASIIGDAVLYVQELQMQANKLKADIASLELQM 195

Query: 194 ------SSINETQTS------HRGQN-HKKIVQTSHSGQFLPCKIIQLDVFQVEERGFYL 253
                 + I   ++S      ++G N + K +Q + +   +  KII++DVFQVEERGFY+
Sbjct: 196 QANKLKADIASLESSLIGSDRYQGSNRNPKNLQNTSNNHPIRKKIIKMDVFQVEERGFYV 255

Query: 254 RLVCKMGERVAMSLYKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKL 300
           RLVC  GE VA SLY+ LESLTSFS+Q+SNLA+ S+ F+LT T+NV+  E DMNLPNLKL
Sbjct: 256 RLVCNKGEGVAPSLYRALESLTSFSVQNSNLATTSEGFVLTFTLNVKESEQDMNLPNLKL 315

[Close]
BLAST of CmoCh20G005570 vs. TrEMBL
Match: D7SNA5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0061g00720 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.5e-69
Identity = 171/299 (57.19%), Postives = 208/299 (69.57%), Query Frame = 1 

Query: 11  NINEFELQDFIHGDNFDQYVNLIRGGSENPIFD---NLDLDFMNV---DNRLDPSAEYIL 70
           N+ +F   DFI+  NF+Q + LIRG S + +     N D + MN    DN+   S   + 
Sbjct: 13  NVTDFGFHDFINEPNFEQLIELIRGESADSLVKFCPNYDCEHMNGCLDDNQFGSSVGELF 72

Query: 71  --DSNIVMNSDPNSLFSSLESFNSIMKEVENEDEDEDDTSVENSSVTTSKKSKVDRSRTL 130
             D      S+P+S+  SL S +  MK    E+ D +D+S  N++ T +K +KVDRSRTL
Sbjct: 73  EFDPATATVSNPDSVIDSLPSIDGEMKG--GEEIDGEDSS-GNTTTTPTKGTKVDRSRTL 132

Query: 131 ISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLESS 190
           ISERRRR RMKEKLYALRSLVPNITKMDKASIVGDAVLYV++LQ+QAKKLKAEI  LESS
Sbjct: 133 ISERRRRVRMKEKLYALRSLVPNITKMDKASIVGDAVLYVQQLQMQAKKLKAEIGGLESS 192

Query: 191 INETQTSHRGQNH-KKIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKMGERVAMSL 250
           +      + G     K +Q + S   +  KI Q+DVFQVEERGFY+RL C  GERVA+SL
Sbjct: 193 LVLGAERYNGLVEIPKKIQVARSHHPMCGKIFQMDVFQVEERGFYVRLACNRGERVAVSL 252

Query: 251 YKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGALLNHGFEF 301
           YK LESLT FSIQSSNLA+ S+ F+LT T+NVR C+  MNLPNLKLWLTGALLN GFEF
Sbjct: 253 YKALESLTGFSIQSSNLATFSETFVLTFTLNVRECDESMNLPNLKLWLTGALLNQGFEF 308

[Close]
BLAST of CmoCh20G005570 vs. TrEMBL
Match: A0A059DAQ4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03931 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 1.3e-68
Identity = 163/304 (53.62%), Postives = 217/304 (71.38%), Query Frame = 1 

Query: 6   KHLMMNINEFELQDFIHGDNFDQYVNLIRGGSENPI----FDNLDLDFMNVDNRLDPSAE 65
           K+L+MN ++FE   FI GDNF+Q +NLI+G S +PI    F++  LD +    ++ P+A 
Sbjct: 8   KNLLMNSDDFEPPYFIEGDNFNQMINLIQGESVHPIMKLGFESALLDGVMSGGQVMPTAG 67

Query: 66  YILDSNIVMNSDPNSLFSSLESFN-SIMKEVENEDEDEDD---TSVENSSVTTSKKSKVD 125
                    + + + +  SL S    +M+ +E+E+++ED    T+   ++ T +K++K D
Sbjct: 68  NAFGYGRTSSINCDFVLDSLPSLGRDVMENLEDENDEEDSSGTTTTTATATTPTKRTKTD 127

Query: 126 RSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEIS 185
           RSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLY++ELQ QAKKLKAEI+
Sbjct: 128 RSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYMQELQTQAKKLKAEIA 187

Query: 186 VLESSINETQT-SHRGQNHK-KIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKMGE 245
            LE+S   T   +++ QN   K +Q ++S   +  KI+Q+DVFQVEERGFY+RLVC  G 
Sbjct: 188 SLEASWAGTGLKTYQAQNETTKRIQAANSNHPVCRKILQMDVFQVEERGFYVRLVCPKGA 247

Query: 246 RVAMSLYKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGALLN 300
            VA SLYK LESL SF +Q+SNLA+AS+RF+ T T+NV+  E D  LP+LKLW+ GALLN
Sbjct: 248 GVAASLYKALESLNSFQVQNSNLATASERFVFTFTLNVKESEQDTTLPDLKLWIAGALLN 307

[Close]
BLAST of CmoCh20G005570 vs. TrEMBL
Match: A0A0D2TM33_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G090400 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 2.2e-68
Identity = 158/305 (51.80%), Postives = 215/305 (70.49%), Query Frame = 1 

Query: 13  NEFELQDFIHGDNFDQYVNLIRGGSENPIFDNLDLDFMN----VDNRLD--PSAEYILDS 72
           N+FEL DFI   NFDQ+++LIRG SE+      D D +N     D ++   P   + LD+
Sbjct: 13  NQFELYDFIDDPNFDQFIDLIRGESEDAGV-GYDCDLLNGSFVEDKQISSTPGDTFCLDA 72

Query: 73  NIVMNSDPNSLFSSLES--FNSIMKEVENEDEDEDD--------TSVENSSVTTSKKSKV 132
           +  +  D N +F    S  +  +MK+ E+++++E+         T+   ++ T +KK +V
Sbjct: 73  STTIVPDSNYVFDPFPSTFYGEMMKDGEDDNDEENSSGTTTATATATTPTTPTATKKPRV 132

Query: 133 DRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEI 192
           DRSRTLISER RRGRMKEKLYALRSLVPNITKMDKASI+GDAVLYV++LQ+QAKKLKAEI
Sbjct: 133 DRSRTLISERLRRGRMKEKLYALRSLVPNITKMDKASIIGDAVLYVQDLQMQAKKLKAEI 192

Query: 193 SVLESSINETQTSHRGQNHKKIVQTSHSGQFLPCK-IIQLDVFQVEERGFYLRLVCKMGE 252
           + LE+++  ++   +   +   ++ + S     CK I+QL++FQVEER FY+RL+C  GE
Sbjct: 193 AGLEATLAGSERYQQSIENPVKIRVARSNSHPVCKKIMQLNMFQVEEREFYIRLICNKGE 252

Query: 253 RVAMSLYKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGALLN 301
            VA+SLYK LESLT+F + +SNLA+ SDRF+LT T+N+R+CE  MNLPNLKLW+ GALLN
Sbjct: 253 GVAISLYKALESLTNFKVLNSNLATLSDRFVLTFTLNMRDCEQSMNLPNLKLWVCGALLN 312

[Close]
BLAST of CmoCh20G005570 vs. TAIR10
Match: AT2G28160.1 (AT2G28160.1 FER-like regulator of iron uptake)

HSP 1 Score: 246.1 bits (627), Expect = 2.7e-65
Identity = 161/317 (50.79%), Postives = 207/317 (65.30%), Query Frame = 1 

Query: 9   MMNINEFELQDFIHGDNFDQYVNLIRGG----SENPIFDNLDLDFMNVDNRLDPSAEYIL 68
           + NIN+ EL +F+   NFDQ++NLIRG      ENP+   LD D   + N     +   +
Sbjct: 8   LSNINDLELHNFLVDPNFDQFINLIRGDHQTIDENPV---LDFDLGPLQN-----SPCFI 67

Query: 69  DSNIVMNSDPNSLFSSLESFNSIMKE-----------VENEDEDEDDTSVENSSVTTS-- 128
           D N  + +  + LF  L   +S + E              E+++ED    ++SS TT+  
Sbjct: 68  DENQFIPTPVDDLFDELPDLDSNVAESFRSFDGDSVRAGGEEDEEDYNDGDDSSATTTNN 127

Query: 129 ---KKSKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQ 188
              +K+K DRSRTLISERRRRGRMK+KLYALRSLVPNITKMDKASIVGDAVLYV+ELQ Q
Sbjct: 128 DGTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQ 187

Query: 189 AKKLKAEISVLESSINETQTSHRGQNHKKIVQTSHSGQFL----PCKIIQLDVFQVEERG 248
           AKKLK++I+ LE+S+N T      Q H    Q +   + +      KIIQ+DV QVEE+G
Sbjct: 188 AKKLKSDIAGLEASLNSTGGY---QEHAPDAQKTQPFRGINPPASKKIIQMDVIQVEEKG 247

Query: 249 FYLRLVCKMGERVAMSLYKVLESLTSFSIQSSNLASAS-DRFILTATINVRNCEMDMNLP 301
           FY+RLVC  GE VA SLYK LESLTSF +Q+SNL+S S D ++LT T++    E  +NLP
Sbjct: 248 FYVRLVCNKGEGVAPSLYKSLESLTSFQVQNSNLSSPSPDTYLLTYTLDGTCFEQSLNLP 307

[Close]
BLAST of CmoCh20G005570 vs. TAIR10
Match: AT5G57150.4 (AT5G57150.4 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 79.3 bits (194), Expect = 4.4e-15
Identity = 67/201 (33.33%), Postives = 107/201 (53.23%), Query Frame = 1 

Query: 91  VENEDEDEDDT---------SVENSSVTTSKKSKVDRSRTLISERRRRGRMKEKLYALRS 150
           ++NED + D +         S ++SS   +  S    S+ ++SER RR ++ ++L+ALRS
Sbjct: 19  LQNEDFEYDRSWPLEEAISGSYDSSSPDGAASSPA--SKNIVSERNRRQKLNQRLFALRS 78

Query: 151 LVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLESSINETQTSHRGQNH------ 210
           +VPNITKMDKASI+ DA+ Y++ LQ + KKL+AEI  LES+   + +  +  +       
Sbjct: 79  VVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTPKSSLSFSKDFDRDLLVPV 138

Query: 211 --KKIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKMGERVAMSLYKVLESLTSFSI 270
             KK+ Q          ++++L V  + ER   + + C       + L +V ESL +  I
Sbjct: 139 TSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVTCNKRTDTMVKLCEVFESL-NLKI 198

Query: 271 QSSNLASASDRFILTATINVR 275
            +SNL S S     T  I +R
Sbjct: 199 LTSNLTSFSGMIFHTVFIELR 216

[Close]
BLAST of CmoCh20G005570 vs. TAIR10
Match: AT2G16910.1 (AT2G16910.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 73.6 bits (179), Expect = 2.4e-13
Identity = 67/216 (31.02%), Postives = 111/216 (51.39%), Query Frame = 1 

Query: 90  EVENEDEDEDDTSVENSSVTTSKKSKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKM 149
           +  ++ +DEDD   +       K  K  +++ L++ERRRR ++ ++LYALRSLVP ITK+
Sbjct: 290 DCSDQIDDEDDPKYKK------KSGKGSQAKNLMAERRRRKKLNDRLYALRSLVPRITKL 349

Query: 150 DKASIVGDAVLYVKELQVQAKKLKAEISVLESSINETQTSHRGQN----HKKIVQTSHSG 209
           D+ASI+GDA+ YVKELQ +AK+L+ E   LE +      S+R Q     +  +V   H G
Sbjct: 350 DRASILGDAINYVKELQNEAKELQDE---LEENSETEDGSNRPQGGMSLNGTVVTGFHPG 409

Query: 210 QFLPCKI--------------------IQLDVFQVEERGFYLRLVCKMGERVAMSLYKVL 269
                 +                     Q+DV Q++ R F+++++C   E       +++
Sbjct: 410 LSCNSNVPSVKQDVDLENSNDKGQEMEPQVDVAQLDGREFFVKVIC---EYKPGGFTRLM 469

Query: 270 ESLTSFSIQSSNLASASDRFILTATINVRNCEMDMN 282
           E+L S  ++ +N   A+    L+   NV   E + N
Sbjct: 470 EALDSLGLEVTN---ANTTRYLSLVSNVFKVEKNDN 490

[Close]
BLAST of CmoCh20G005570 vs. TAIR10
Match: AT4G29930.3 (AT4G29930.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 71.6 bits (174), Expect = 9.1e-13
Identity = 63/209 (30.14%), Postives = 109/209 (52.15%), Query Frame = 1 

Query: 92  ENEDEDEDDTSVENSSVTTSKKSKVD-------RSRTLISERRRRGRMKEKLYALRSLVP 151
           +N++ + D   +E +   + + S  D        S+ ++SER RR ++ ++L+ALRS+VP
Sbjct: 19  QNQELEFDSWPMEEAFSGSGESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVVP 78

Query: 152 NITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLES--------------SINETQTSH 211
           NI+K+DKAS++ D++ Y++EL  Q K L+AEI  LES              +  ET    
Sbjct: 79  NISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELESRSTLLENPVRDYDCNFAETHLQD 138

Query: 212 RGQNH----KKIVQTSHSG--QFLPCKIIQLDVFQVEERGFYLRLVCKMGERVAMSLYKV 271
              N+    KK  Q  +S   Q  P +++++ V  + E+   + + C       + L KV
Sbjct: 139 FSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVTWMGEKTVVVCITCSKKRETMVQLCKV 198

Query: 272 LESLTSFSIQSSNLASASDRFILTATINV 274
           LESL + +I ++N +S + R   T  + V
Sbjct: 199 LESL-NLNILTTNFSSFTSRLSTTLFLQV 226

[Close]
BLAST of CmoCh20G005570 vs. TAIR10
Match: AT2G46510.1 (AT2G46510.1 ABA-inducible BHLH-type transcription factor)

HSP 1 Score: 65.1 bits (157), Expect = 8.5e-11
Identity = 32/65 (49.23%), Postives = 51/65 (78.46%), Query Frame = 1 

Query: 124 SERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLESSI 183
           +ER+RR ++ ++ YALRS+VPNI+KMDKAS++GDA+ Y+KELQ + K ++ E    + S+
Sbjct: 399 AERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERVGTDKSL 458

Query: 184 NETQT 189
           +E+ T
Sbjct: 459 SESNT 463

[Close]
BLAST of CmoCh20G005570 vs. NCBI nr
Match: gi|449456162|ref|XP_004145819.1| (PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR [Cucumis sativus])

HSP 1 Score: 471.5 bits (1212), Expect = 1.1e-129
Identity = 260/307 (84.69%), Postives = 280/307 (91.21%), Query Frame = 1 

Query: 1   MEHVGKHLMMNINE-FELQDFIHGDNFDQYVNLIRGGSENPIFDN-LDLDFMN---VDNR 60
           ME  G+HLM +IN+ FELQDFIHGDNFDQYVNLIRGG+E PIF+N  DLDFMN   ++NR
Sbjct: 1   MEQFGRHLMTDINDQFELQDFIHGDNFDQYVNLIRGGNETPIFNNNFDLDFMNGCLIENR 60

Query: 61  L-DPSAEYILDSNIVMNSDPNSLFSSLESFNSIMKEVENEDEDEDDT-SVENSSVTTSKK 120
           + D S EYI+DSN+VMNSDPNSLFS+LESFNSIMKEVE+EDEDED+  SVENSS TTSKK
Sbjct: 61  VVDQSLEYIVDSNMVMNSDPNSLFSTLESFNSIMKEVEDEDEDEDENESVENSSSTTSKK 120

Query: 121 SKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLK 180
            K DR+RTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQ+QAKKLK
Sbjct: 121 PKADRTRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQMQAKKLK 180

Query: 181 AEISVLESSINETQTSHRGQNHKKIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKM 240
           +EISVLESSINETQ  HR Q  KKI+QTS+S QFLP KIIQLDVFQVEERGFYLRLVCKM
Sbjct: 181 SEISVLESSINETQKVHRDQTKKKIIQTSYSDQFLPTKIIQLDVFQVEERGFYLRLVCKM 240

Query: 241 GERVAMSLYKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGAL 300
           GERVAMSLYKVLESLTSF IQSSNL SASDRFILTATINVR+CE+DMNLPNLKLWLTGAL
Sbjct: 241 GERVAMSLYKVLESLTSFIIQSSNLTSASDRFILTATINVRDCEVDMNLPNLKLWLTGAL 300

[Close]
BLAST of CmoCh20G005570 vs. NCBI nr
Match: gi|659130918|ref|XP_008465418.1| (PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR [Cucumis melo])

HSP 1 Score: 469.2 bits (1206), Expect = 5.6e-129
Identity = 259/309 (83.82%), Postives = 278/309 (89.97%), Query Frame = 1 

Query: 1   MEHVGKHLMMNINE-FELQDFIHGDNFDQYVNLIRGGSENPIFDN-LDLDFMN----VDN 60
           ME  G+HLM +IN+ FELQDFIHGDNFD+YVNLIRGG+E PIF+N  DLDF+N     D 
Sbjct: 1   MEQFGRHLMTDINDQFELQDFIHGDNFDRYVNLIRGGNETPIFNNNFDLDFVNGCLIEDR 60

Query: 61  RLDPSAEYILDSNIVMNSDPNSLFSSLESFNSIMKEVENEDEDEDD---TSVENSSVTTS 120
            +D S EYI+DSN+VMNSDPNSLFS+LESFNSIMKEVENEDEDED+    SVENSS TTS
Sbjct: 61  VVDQSLEYIVDSNMVMNSDPNSLFSTLESFNSIMKEVENEDEDEDEDENESVENSSSTTS 120

Query: 121 KKSKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKK 180
           KK K DR+RTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQ+QAKK
Sbjct: 121 KKPKADRTRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQMQAKK 180

Query: 181 LKAEISVLESSINETQTSHRGQNHKKIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVC 240
           LKAEISVLESSINETQ  HR Q  KKI+QTS+S QFLP KIIQLDVFQVEERGFYLRLVC
Sbjct: 181 LKAEISVLESSINETQKIHRDQTKKKIIQTSYSDQFLPTKIIQLDVFQVEERGFYLRLVC 240

Query: 241 KMGERVAMSLYKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTG 300
           KMGERVAMSLYKVLESLT+F IQSSNLASASDRFILTATINVR+CE+DMNLPNLKLWLTG
Sbjct: 241 KMGERVAMSLYKVLESLTNFIIQSSNLASASDRFILTATINVRDCEVDMNLPNLKLWLTG 300

[Close]
BLAST of CmoCh20G005570 vs. NCBI nr
Match: gi|590587834|ref|XP_007016069.1| (Basic helix-loop-helix protein BHLH20, putative [Theobroma cacao])

HSP 1 Score: 288.1 bits (736), Expect = 1.8e-74
Identity = 167/297 (56.23%), Postives = 223/297 (75.08%), Query Frame = 1 

Query: 13  NEFELQDFIHGDNFDQYVNLIRGGSENPIFDNLDLDFMN---VDNRL--DPSAEYILDSN 72
           N+FEL DFI   NFDQ+ +LIRG +E+ + D  D D +N   VD ++   P   +  D+ 
Sbjct: 13  NDFELHDFIDDPNFDQFNDLIRGENEDSVAD-FDYDLVNGCFVDKQIRSTPGDAFGFDAT 72

Query: 73  IVMNSDPNSLFSSLESFN-SIMK--EVENEDEDEDDTSVENSSVTT-SKKSKVDRSRTLI 132
             M  DPN ++++L SF+  IMK  E +N+D+DE+ +    +++TT +KK+K+DRSRTLI
Sbjct: 73  SAMVPDPNYIYNALSSFDGDIMKYGEEDNDDDDENSSGTTTTTITTATKKAKLDRSRTLI 132

Query: 133 SERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLESSI 192
           SERRRRGRMKEKLYALRSLVPNITKMDKASI+GDAV YV++LQ+QAKKLKAEI+ LE+S+
Sbjct: 133 SERRRRGRMKEKLYALRSLVPNITKMDKASIIGDAVRYVQDLQMQAKKLKAEIAGLEASL 192

Query: 193 NETQTSHRGQNHKKIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKMGERVAMSLYK 252
             ++      +    +Q + +   +  KI Q+D+FQVEERGFY+RLVC  GE VA+SLYK
Sbjct: 193 AGSERYQEPIDKPVKIQVARNSHPMCKKITQMDMFQVEERGFYIRLVCDKGEGVAVSLYK 252

Query: 253 VLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGALLNHGFEF 301
            LE+LT+F +Q+SNL +AS+RF+LT T+NVR+ E+ MNLPNLKLW+TGALLN GFEF
Sbjct: 253 ALETLTNFKVQNSNLNTASERFVLTFTLNVRDFELSMNLPNLKLWVTGALLNQGFEF 308

[Close]
BLAST of CmoCh20G005570 vs. NCBI nr
Match: gi|743941078|ref|XP_011015019.1| (PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR isoform X1 [Populus euphratica])

HSP 1 Score: 277.3 bits (708), Expect = 3.1e-71
Identity = 165/296 (55.74%), Postives = 209/296 (70.61%), Query Frame = 1 

Query: 14  EFELQDFIHGDNFDQYVNLIRGGSENPIFDNLDLDFMNVDNRLDPSAEYILDSNIV---- 73
           +F+L DFI   NFD+Y++LIRG +E   FD   ++   VD++   S     D +++    
Sbjct: 19  QFQLHDFIDEANFDRYIDLIRGENEITAFDCDLINGFLVDSQFGLSTGDTFDCDLINHVP 78

Query: 74  ------MNSDPNSLFSSLESFNSIMKEVENEDEDEDDTSVENSSVTTSKKSKVDRSRTLI 133
                 M  DPN +  +L SF+  M     ED DE+D+S    + TT+KK+K DRSRTLI
Sbjct: 79  AHTSSAMEQDPNYVPIALPSFDGDMGLGAEEDTDEEDSS---GTTTTTKKTKKDRSRTLI 138

Query: 134 SERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLESSI 193
           SERRRRGRMKEKLYALRSLVPNITKMDKASI+GDAVLYV+ELQ+QA KLKA+I+ LESS+
Sbjct: 139 SERRRRGRMKEKLYALRSLVPNITKMDKASIIGDAVLYVQELQMQANKLKADIASLESSL 198

Query: 194 NETQTSHRGQNHKKIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKMGERVAMSLYK 253
             +        + K  Q + +   +  KII++DVFQVEERGFY+RLVC  GE VA SLY+
Sbjct: 199 IGSDRYQGSNRNPKNPQNTSNNHPIRKKIIKMDVFQVEERGFYVRLVCSNGEGVAASLYR 258

Query: 254 VLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGALLNHGFE 300
            LESLTSFS+Q+SNLA+ S+ F+LT T+NV+  E DMNLPNLKLW+TGALLN GFE
Sbjct: 259 ALESLTSFSVQNSNLATTSEGFVLTFTLNVKESEHDMNLPNLKLWVTGALLNQGFE 311

[Close]
BLAST of CmoCh20G005570 vs. NCBI nr
Match: gi|1000956162|ref|XP_002523723.2| (PREDICTED: LOW QUALITY PROTEIN: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR [Ricinus communis])

HSP 1 Score: 273.1 bits (697), Expect = 5.8e-70
Identity = 168/306 (54.90%), Postives = 218/306 (71.24%), Query Frame = 1 

Query: 9   MMNINEFELQDFIHGDNFDQYVNLIRGGSENPIFDNLDLDFMN---VDNRL-DPS-AEYI 68
           M++ N FEL DF    NFDQ+++LIRG +E+ I    D D +N   VDN++ +P+  E +
Sbjct: 11  MVHTNNFELYDFTAEANFDQFIDLIRGENEDQI-SRFDCDLINGLLVDNQIGNPTHQEEL 70

Query: 69  LDSNIVMNSDPNSLFS-----SLESFNSIMKEVENEDEDEDDTSVENSSVT---TSKKSK 128
            D +        S        SL SF+  MKE+E + ++E+D S   ++ T   T +K+K
Sbjct: 71  FDFSTATTPIYTSAMVPDQNYSLPSFDGDMKELEEDFDEEEDHSSGTTTTTPTATRRKTK 130

Query: 129 VDRSRTLISERRRRGRMKEKLYALRSLVPNITK-MDKASIVGDAVLYVKELQVQAKKLKA 188
            DRSRTLISER+RRGRMKEKLYALRSLVPNITK MDKASI+GDAVLYV+E+Q+QAKKLK 
Sbjct: 131 TDRSRTLISERKRRGRMKEKLYALRSLVPNITKXMDKASIIGDAVLYVQEMQMQAKKLKT 190

Query: 189 EISVLESSINETQTSHRGQNHKKIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKMG 248
           EI+ LE+S+  T+       + +  + ++    +  KI+Q+DVFQVEERGFY+RLVC   
Sbjct: 191 EIAGLEASLVRTERYQGSNKNPRKTRIAYDNNPICKKIVQMDVFQVEERGFYVRLVCNKA 250

Query: 249 ERVAMSLYKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGALL 301
           E VA+SLY+ +ESLTSF+IQSSNL +AS+RFILT TINV+  E DMNLPNLKLW+TGALL
Sbjct: 251 EGVAVSLYRTIESLTSFNIQSSNLTTASERFILTFTINVKENEKDMNLPNLKLWITGALL 310

The following BLAST results are available for this feature:
BLAST of CmoCh20G005570 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FIT_ARATH4.8e-6450.79Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR OS=Ar... [more]
BH035_ARATH2.3e-1332.37Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2 SV=1[more]
AMS_ARATH4.2e-1231.02Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana GN=AMS PE=1 SV=... [more]
BH027_ARATH1.6e-1130.14Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2 SV=1[more]
AIB_ARATH1.5e-0949.23Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana GN=AIB PE=2... [more]
BLAST of CmoCh20G005570 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A061GWC5_THECC1.2e-7456.23Basic helix-loop-helix protein BHLH20, putative OS=Theobroma cacao GN=TCM_041590... [more]
B9HQP2_POPTR5.3e-7054.17Basic helix-loop-helix family protein OS=Populus trichocarpa GN=POPTR_0009s01100... [more]
D7SNA5_VITVI1.5e-6957.19Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0061g00720 PE=4 SV=... [more]
A0A059DAQ4_EUCGR1.3e-6853.62Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03931 PE=4 SV=1[more]
A0A0D2TM33_GOSRA2.2e-6851.80Uncharacterized protein OS=Gossypium raimondii GN=B456_009G090400 PE=4 SV=1[more]
BLAST of CmoCh20G005570 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G28160.12.7e-6550.79 FER-like regulator of iron uptake[more]
AT5G57150.44.4e-1533.33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT2G16910.12.4e-1331.02 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT4G29930.39.1e-1330.14 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT2G46510.18.5e-1149.23 ABA-inducible BHLH-type transcription factor[more]
BLAST of CmoCh20G005570 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449456162|ref|XP_004145819.1|1.1e-12984.69PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION F... [more]
gi|659130918|ref|XP_008465418.1|5.6e-12983.82PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION F... [more]
gi|590587834|ref|XP_007016069.1|1.8e-7456.23Basic helix-loop-helix protein BHLH20, putative [Theobroma cacao][more]
gi|743941078|ref|XP_011015019.1|3.1e-7155.74PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION F... [more]
gi|1000956162|ref|XP_002523723.2|5.8e-7054.90PREDICTED: LOW QUALITY PROTEIN: transcription factor FER-LIKE IRON DEFICIENCY-IN... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034756 regulation of iron ion transport
biological_process GO:0010039 response to iron ion
biological_process GO:0050789 regulation of biological process
biological_process GO:0000041 transition metal ion transport
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh20G005570.1CmoCh20G005570.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 118..186
score: 4.1
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 123..166
score: 1.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 122..171
score: 7.9
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 116..165
score: 15
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 118..188
score: 1.96
NoneNo IPR availableunknownCoilCoilcoord: 162..189
scor
NoneNo IPR availablePANTHERPTHR31945FAMILY NOT NAMEDcoord: 9..300
score: 2.3E
NoneNo IPR availablePANTHERPTHR31945:SF17TRANSCRIPTION FACTOR FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTORcoord: 9..300
score: 2.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh20G005570Cucsa.385700Cucumber (Gy14) v1cgycmoB1064
CmoCh20G005570CmaCh20G005250Cucurbita maxima (Rimu)cmacmoB550
CmoCh20G005570CmaCh02G013790Cucurbita maxima (Rimu)cmacmoB615
CmoCh20G005570Cla008700Watermelon (97103) v1cmowmB513
CmoCh20G005570Csa6G148250Cucumber (Chinese Long) v2cmocuB544
CmoCh20G005570MELO3C026952Melon (DHL92) v3.5.1cmomeB481
CmoCh20G005570ClCG02G021600Watermelon (Charleston Gray)cmowcgB479
CmoCh20G005570CSPI06G11920Wild cucumber (PI 183967)cmocpiB549
CmoCh20G005570Lsi10G012230Bottle gourd (USVL1VR-Ls)cmolsiB490
CmoCh20G005570Cp4.1LG16g05060Cucurbita pepo (Zucchini)cmocpeB517
CmoCh20G005570Cp4.1LG05g02940Cucurbita pepo (Zucchini)cmocpeB531
CmoCh20G005570MELO3C026952.2Melon (DHL92) v3.6.1cmomedB556
CmoCh20G005570CsaV3_6G014370Cucumber (Chinese Long) v3cmocucB0651
CmoCh20G005570Cla97C02G047660Watermelon (97103) v2cmowmbB545
CmoCh20G005570Bhi10G000103Wax gourdcmowgoB0691
CmoCh20G005570CsGy6G012010Cucumber (Gy14) v2cgybcmoB769
CmoCh20G005570Carg03202Silver-seed gourdcarcmoB0464
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh20G005570Melon (DHL92) v3.6.1cmomedB584
CmoCh20G005570Melon (DHL92) v3.6.1cmomedB589
CmoCh20G005570Silver-seed gourdcarcmoB1235
CmoCh20G005570Cucumber (Chinese Long) v3cmocucB0643
CmoCh20G005570Cucumber (Chinese Long) v3cmocucB0656
CmoCh20G005570Watermelon (97103) v2cmowmbB543
CmoCh20G005570Watermelon (97103) v2cmowmbB569
CmoCh20G005570Wax gourdcmowgoB0672
CmoCh20G005570Wax gourdcmowgoB0696
CmoCh20G005570Cucurbita moschata (Rifu)cmocmoB413
CmoCh20G005570Cucurbita moschata (Rifu)cmocmoB422
CmoCh20G005570Cucurbita moschata (Rifu)cmocmoB425
CmoCh20G005570Cucumber (Gy14) v1cgycmoB0321
CmoCh20G005570Cucumber (Gy14) v1cgycmoB0839
CmoCh20G005570Cucurbita maxima (Rimu)cmacmoB474
CmoCh20G005570Cucurbita maxima (Rimu)cmacmoB818
CmoCh20G005570Wild cucumber (PI 183967)cmocpiB541
CmoCh20G005570Cucumber (Chinese Long) v2cmocuB536
CmoCh20G005570Melon (DHL92) v3.5.1cmomeB508
CmoCh20G005570Watermelon (Charleston Gray)cmowcgB474
CmoCh20G005570Watermelon (Charleston Gray)cmowcgB502
CmoCh20G005570Watermelon (97103) v1cmowmB505
CmoCh20G005570Bottle gourd (USVL1VR-Ls)cmolsiB503
CmoCh20G005570Bottle gourd (USVL1VR-Ls)cmolsiB509
CmoCh20G005570Cucumber (Gy14) v2cgybcmoB360
CmoCh20G005570Cucumber (Gy14) v2cgybcmoB773