CmaCh20G005250 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh20G005250
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionBHLH transcription factor
LocationCma_Chr20 : 2531997 .. 2533365 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCAAAGTACTGTAACGTTTGACATGGAGCACGTCGGGAAGCATTTGATGATGAACATCAATGAGTTTGAGCTTCAAGATTTAATCCATGGCGACAACTTCGATCAATATGTAAATCTGATTCGTGGAGGGAGCGAGAATCCGATATTTGATAACCTCGACCTTGATTTTATGAATGTCGACAATCGCCTCGATCCTAGCGCGGAATACATTCTAGATTCCAATATCGTCATGAATTCTGATCCTAATTCTTTGTTTAGTTCATTGGAGAGTTTCAATAGCATCATGAAAGAAGTTGAAACCGAAGATGAAGACGAAGACGATGCTTCTGTTGAGAACTCTTCTGTCACAACGTCGAAGAAATCGAAGGTCGATCGATCCAGAACTTTGATTTCCGAGCGTAGGAGAAGAGGAAGGATGAAGGAAAAGCTTTATGCATTGCGTTCATTGGTTCCAAATATAACTAAGGTATGAGAAATTGATACTCACATTCGTAATTCTATGTTAGGTCTTGTAGGTTAGGTCGGCTAGCAATTTTAAAATAGTTAAAATCAAACATGTTCAATTCTAAATTCAAACCGTGGATAATTTTGAAATCGTTAAAATCTCAAAATCATTCAAGAACAACAAATTCTTCTGATGTTTTTTTGAATGAAATGGTAAAAGGCCGAATTCATGATGTGGAAAAATGCAGATGGACAAGGCTTCCATTGTTGGGGACGCAGTGCTGTACGTGAAAGAGCTACAAGTGCAGGCGAAGAAGCTGAAAGCGGAGATATCAGTTTTGGAATCCTCAATCAACGAAACACAAACGAGTTATCGAGGTCAAAACCACAAGAATATTGTTCAAACTTCACATTCTGGCCAATTCCTTCCCTGCAAAATAATTCAGGTACATTTCAAGTTGTAAGATCAGATAAAACTTCATGCTCTGGTCTGTGATGAAATTGTGAAGCTAAGCTGTGTTAATAATGTGCAATTTGGGGTGTTTTTTTTTCTTCTTCTTTGAAAGCTGGATGTGTTTCAAGTGGAGGAAAGAGGGTTTTATTTGAGGCTGGTCTGCAAAATGGGTGAAAGAGTAGCCATGTCTCTTTACAAGGTTCTTGAATCCCTCACCAGCTTCAGTATTCAAAGCTCCAATTTGGCCTCTGCTTCTGACAGATTCATTCTCACAGCTACCATTAATGTAATTACTTTCTTACATCCAATCTGATTCTCTTGAGATTAACTTTTTGGTTGCTTCCCAATGGCTCATGCTATGCCATTGTAATCTGTTTTTTGCAGGTGAGAAATTGTGAGATGGACATGAACTTGCCAAATCTGAAGCTTTGGCTTACGGGGGCACTTCTTAACCATGGATTTGAGTTCTAA

mRNA sequence

TCAAAGTACTGTAACGTTTGACATGGAGCACGTCGGGAAGCATTTGATGATGAACATCAATGAGTTTGAGCTTCAAGATTTAATCCATGGCGACAACTTCGATCAATATGTAAATCTGATTCGTGGAGGGAGCGAGAATCCGATATTTGATAACCTCGACCTTGATTTTATGAATGTCGACAATCGCCTCGATCCTAGCGCGGAATACATTCTAGATTCCAATATCGTCATGAATTCTGATCCTAATTCTTTGTTTAGTTCATTGGAGAGTTTCAATAGCATCATGAAAGAAGTTGAAACCGAAGATGAAGACGAAGACGATGCTTCTGTTGAGAACTCTTCTGTCACAACGTCGAAGAAATCGAAGGTCGATCGATCCAGAACTTTGATTTCCGAGCGTAGGAGAAGAGGAAGGATGAAGGAAAAGCTTTATGCATTGCGTTCATTGGTTCCAAATATAACTAAGATGGACAAGGCTTCCATTGTTGGGGACGCAGTGCTGTACGTGAAAGAGCTACAAGTGCAGGCGAAGAAGCTGAAAGCGGAGATATCAGTTTTGGAATCCTCAATCAACGAAACACAAACGAGTTATCGAGGTCAAAACCACAAGAATATTGTTCAAACTTCACATTCTGGCCAATTCCTTCCCTGCAAAATAATTCAGCTGGATGTGTTTCAAGTGGAGGAAAGAGGGTTTTATTTGAGGCTGGTCTGCAAAATGGGTGAAAGAGTAGCCATGTCTCTTTACAAGGTTCTTGAATCCCTCACCAGCTTCAGTATTCAAAGCTCCAATTTGGCCTCTGCTTCTGACAGATTCATTCTCACAGCTACCATTAATGTGAGAAATTGTGAGATGGACATGAACTTGCCAAATCTGAAGCTTTGGCTTACGGGGGCACTTCTTAACCATGGATTTGAGTTCTAA

Coding sequence (CDS)

ATGGAGCACGTCGGGAAGCATTTGATGATGAACATCAATGAGTTTGAGCTTCAAGATTTAATCCATGGCGACAACTTCGATCAATATGTAAATCTGATTCGTGGAGGGAGCGAGAATCCGATATTTGATAACCTCGACCTTGATTTTATGAATGTCGACAATCGCCTCGATCCTAGCGCGGAATACATTCTAGATTCCAATATCGTCATGAATTCTGATCCTAATTCTTTGTTTAGTTCATTGGAGAGTTTCAATAGCATCATGAAAGAAGTTGAAACCGAAGATGAAGACGAAGACGATGCTTCTGTTGAGAACTCTTCTGTCACAACGTCGAAGAAATCGAAGGTCGATCGATCCAGAACTTTGATTTCCGAGCGTAGGAGAAGAGGAAGGATGAAGGAAAAGCTTTATGCATTGCGTTCATTGGTTCCAAATATAACTAAGATGGACAAGGCTTCCATTGTTGGGGACGCAGTGCTGTACGTGAAAGAGCTACAAGTGCAGGCGAAGAAGCTGAAAGCGGAGATATCAGTTTTGGAATCCTCAATCAACGAAACACAAACGAGTTATCGAGGTCAAAACCACAAGAATATTGTTCAAACTTCACATTCTGGCCAATTCCTTCCCTGCAAAATAATTCAGCTGGATGTGTTTCAAGTGGAGGAAAGAGGGTTTTATTTGAGGCTGGTCTGCAAAATGGGTGAAAGAGTAGCCATGTCTCTTTACAAGGTTCTTGAATCCCTCACCAGCTTCAGTATTCAAAGCTCCAATTTGGCCTCTGCTTCTGACAGATTCATTCTCACAGCTACCATTAATGTGAGAAATTGTGAGATGGACATGAACTTGCCAAATCTGAAGCTTTGGCTTACGGGGGCACTTCTTAACCATGGATTTGAGTTCTAA

Protein sequence

MEHVGKHLMMNINEFELQDLIHGDNFDQYVNLIRGGSENPIFDNLDLDFMNVDNRLDPSAEYILDSNIVMNSDPNSLFSSLESFNSIMKEVETEDEDEDDASVENSSVTTSKKSKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLESSINETQTSYRGQNHKNIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKMGERVAMSLYKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGALLNHGFEF
Homology
[Close]
BLAST of CmaCh20G005250 vs. Swiss-Prot
Match: FIT_ARATH (Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 3.1e-63
Identity = 162/317 (51.10%), Postives = 206/317 (64.98%), Query Frame = 1 

Query: 9   MMNINEFELQDLIHGDNFDQYVNLIRGG----SENPIFDNLDLDFMNVDNRLDPSAEYIL 68
           + NIN+ EL + +   NFDQ++NLIRG      ENP+   LD D   + N     +   +
Sbjct: 8   LSNINDLELHNFLVDPNFDQFINLIRGDHQTIDENPV---LDFDLGPLQN-----SPCFI 67

Query: 69  DSNIVMNSDPNSLFSSL--------ESFNSIM--------KEVETEDEDEDDASVENSSV 128
           D N  + +  + LF  L        ESF S          +E E +  D DD+S   ++ 
Sbjct: 68  DENQFIPTPVDDLFDELPDLDSNVAESFRSFDGDSVRAGGEEDEEDYNDGDDSSATTTNN 127

Query: 129 TTSKKSKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQ 188
             ++K+K DRSRTLISERRRRGRMK+KLYALRSLVPNITKMDKASIVGDAVLYV+ELQ Q
Sbjct: 128 DGTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQ 187

Query: 189 AKKLKAEISVLESSINETQTSYRGQNHKNIVQTSHSGQFL----PCKIIQLDVFQVEERG 248
           AKKLK++I+ LE+S+N T   Y  Q H    Q +   + +      KIIQ+DV QVEE+G
Sbjct: 188 AKKLKSDIAGLEASLNST-GGY--QEHAPDAQKTQPFRGINPPASKKIIQMDVIQVEEKG 247

Query: 249 FYLRLVCKMGERVAMSLYKVLESLTSFSIQSSNLASAS-DRFILTATINVRNCEMDMNLP 301
           FY+RLVC  GE VA SLYK LESLTSF +Q+SNL+S S D ++LT T++    E  +NLP
Sbjct: 248 FYVRLVCNKGEGVAPSLYKSLESLTSFQVQNSNLSSPSPDTYLLTYTLDGTCFEQSLNLP 307

[Close]
BLAST of CmaCh20G005250 vs. Swiss-Prot
Match: BH035_ARATH (Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.3e-13
Identity = 63/193 (32.64%), Postives = 101/193 (52.33%), Query Frame = 1 

Query: 96  EDEDDASVENSSVTTSKKSKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIV 155
           E+    S ++SS   +  S    S+ ++SER RR ++ ++L+ALRS+VPNITKMDKASI+
Sbjct: 33  EEAISGSYDSSSPDGAASSPA--SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASII 92

Query: 156 GDAVLYVKELQVQAKKLKAEISVLESSINETQTSYRGQNH--------KNIVQTSHSGQF 215
            DA+ Y++ LQ + KKL+AEI  LES+   + +  +  +         K + Q       
Sbjct: 93  KDAISYIEGLQYEEKKLEAEIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSST 152

Query: 216 LPCKIIQLDVFQVEERGFYLRLVCKMGERVAMSLYKVLESLTSFSIQSSNLASASDRFIL 275
              ++++L V  + ER   + + C       + L +V ESL +  I +SNL S S     
Sbjct: 153 SLIEVLELKVTFMGERTMVVSVTCNKRTDTMVKLCEVFESL-NLKILTSNLTSFSGMIFH 212

Query: 276 TATINVRNCEMDM 281
           T  I     E ++
Sbjct: 213 TVFIEADEEEQEV 222

[Close]
BLAST of CmaCh20G005250 vs. Swiss-Prot
Match: AMS_ARATH (Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana GN=AMS PE=1 SV=2)

HSP 1 Score: 75.5 bits (184), Expect = 1.1e-12
Identity = 64/207 (30.92%), Postives = 106/207 (51.21%), Query Frame = 1 

Query: 96  EDEDDASVENSSVTTSKKSKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIV 155
           +DEDD   +       K  K  +++ L++ERRRR ++ ++LYALRSLVP ITK+D+ASI+
Sbjct: 296 DDEDDPKYKK------KSGKGSQAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASIL 355

Query: 156 GDAVLYVKELQVQAKKLKAEISVLESSINETQTSYRGQNHKNIVQTS-HSGQFLPCKI-- 215
           GDA+ YVKELQ +AK+L+ E+     + + +     G +    V T  H G      +  
Sbjct: 356 GDAINYVKELQNEAKELQDELEENSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPS 415

Query: 216 ------------------IQLDVFQVEERGFYLRLVCKMGERVAMSLYKVLESLTSFSIQ 275
                              Q+DV Q++ R F+++++C   E       +++E+L S  ++
Sbjct: 416 VKQDVDLENSNDKGQEMEPQVDVAQLDGREFFVKVIC---EYKPGGFTRLMEALDSLGLE 475

Query: 276 SSNLASASDRFILTATINVRNCEMDMN 282
            +N   A+    L+   NV   E + N
Sbjct: 476 VTN---ANTTRYLSLVSNVFKVEKNDN 490

[Close]
BLAST of CmaCh20G005250 vs. Swiss-Prot
Match: BH027_ARATH (Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.6e-11
Identity = 63/198 (31.82%), Postives = 104/198 (52.53%), Query Frame = 1 

Query: 96  EDEDDASVENSSVTTSKKSKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIV 155
           E+    S E+SS   +  S    S+ ++SER RR ++ ++L+ALRS+VPNI+K+DKAS++
Sbjct: 31  EEAFSGSGESSSPDGAATSPAS-SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVI 90

Query: 156 GDAVLYVKELQVQAKKLKAEISVLES--------------SINETQTSYRGQNH----KN 215
            D++ Y++EL  Q K L+AEI  LES              +  ET       N+    K 
Sbjct: 91  KDSIDYMQELIDQEKTLEAEIRELESRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKK 150

Query: 216 IVQTSHSG--QFLPCKIIQLDVFQVEERGFYLRLVCKMGERVAMSLYKVLESLTSFSIQS 274
             Q  +S   Q  P +++++ V  + E+   + + C       + L KVLESL + +I +
Sbjct: 151 FKQMDYSTRVQHYPIEVLEMKVTWMGEKTVVVCITCSKKRETMVQLCKVLESL-NLNILT 210

[Close]
BLAST of CmaCh20G005250 vs. Swiss-Prot
Match: AIB_ARATH (Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana GN=AIB PE=2 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 1.5e-09
Identity = 32/65 (49.23%), Postives = 51/65 (78.46%), Query Frame = 1 

Query: 124 SERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLESSI 183
           +ER+RR ++ ++ YALRS+VPNI+KMDKAS++GDA+ Y+KELQ + K ++ E    + S+
Sbjct: 399 AERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERVGTDKSL 458

Query: 184 NETQT 189
           +E+ T
Sbjct: 459 SESNT 463

[Close]
BLAST of CmaCh20G005250 vs. TrEMBL
Match: A0A061GWC5_THECC (Basic helix-loop-helix protein BHLH20, putative OS=Theobroma cacao GN=TCM_041590 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 1.4e-73
Identity = 163/297 (54.88%), Postives = 217/297 (73.06%), Query Frame = 1 

Query: 13  NEFELQDLIHGDNFDQYVNLIRGGSENPIFDNLDLDFMN---VDNRL--DPSAEYILDSN 72
           N+FEL D I   NFDQ+ +LIRG +E+ + D  D D +N   VD ++   P   +  D+ 
Sbjct: 13  NDFELHDFIDDPNFDQFNDLIRGENEDSVAD-FDYDLVNGCFVDKQIRSTPGDAFGFDAT 72

Query: 73  IVMNSDPNSLFSSLESFNSIMKEVETEDEDEDDASVENSSVTT----SKKSKVDRSRTLI 132
             M  DPN ++++L SF+  + +   ED D+DD +   ++ TT    +KK+K+DRSRTLI
Sbjct: 73  SAMVPDPNYIYNALSSFDGDIMKYGEEDNDDDDENSSGTTTTTITTATKKAKLDRSRTLI 132

Query: 133 SERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLESSI 192
           SERRRRGRMKEKLYALRSLVPNITKMDKASI+GDAV YV++LQ+QAKKLKAEI+ LE+S+
Sbjct: 133 SERRRRGRMKEKLYALRSLVPNITKMDKASIIGDAVRYVQDLQMQAKKLKAEIAGLEASL 192

Query: 193 NETQTSYRGQNHKNIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKMGERVAMSLYK 252
             ++      +    +Q + +   +  KI Q+D+FQVEERGFY+RLVC  GE VA+SLYK
Sbjct: 193 AGSERYQEPIDKPVKIQVARNSHPMCKKITQMDMFQVEERGFYIRLVCDKGEGVAVSLYK 252

Query: 253 VLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGALLNHGFEF 301
            LE+LT+F +Q+SNL +AS+RF+LT T+NVR+ E+ MNLPNLKLW+TGALLN GFEF
Sbjct: 253 ALETLTNFKVQNSNLNTASERFVLTFTLNVRDFELSMNLPNLKLWVTGALLNQGFEF 308

[Close]
BLAST of CmaCh20G005250 vs. TrEMBL
Match: B9HQP2_POPTR (Basic helix-loop-helix family protein OS=Populus trichocarpa GN=POPTR_0009s01100g PE=4 SV=2)

HSP 1 Score: 273.5 bits (698), Expect = 3.1e-70
Identity = 171/313 (54.63%), Postives = 216/313 (69.01%), Query Frame = 1 

Query: 14  EFELQDLIHGDNFDQYVNLIRGGSENPIFDNLDLDFMNVDNRLDPSAEYILDSNIV---- 73
           +F+LQD I   NFD+Y++LIRG +E   FD   ++   VDN+   S     D +++    
Sbjct: 16  QFQLQDFIDEANFDRYIDLIRGENEITAFDCDLINGFLVDNQFGLSTGDKFDCDLINHVP 75

Query: 74  ------MNSDPNSLFSSLESFNSIMKEVETEDEDEDDASVENSSVTTSKKSKVDRSRTLI 133
                 M  DPN +  +L SF+  M     ED DE+D+S    + TT+KK+K DRSRTLI
Sbjct: 76  THTSSAMEQDPNYVPIALPSFDGDMGLEAEEDTDEEDSS---GTATTTKKTKKDRSRTLI 135

Query: 134 SERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLE--- 193
           SERRRRGRMKEKLYALRSLVPNITKMDKASI+GDAVLYV+ELQ+QA KLKA+I+ LE   
Sbjct: 136 SERRRRGRMKEKLYALRSLVPNITKMDKASIIGDAVLYVQELQMQANKLKADIASLELQM 195

Query: 194 ------SSINETQTS------YRGQNH--KNIVQTSHSGQFLPCKIIQLDVFQVEERGFY 253
                 + I   ++S      Y+G N   KN+  TS++   +  KII++DVFQVEERGFY
Sbjct: 196 QANKLKADIASLESSLIGSDRYQGSNRNPKNLQNTSNNHP-IRKKIIKMDVFQVEERGFY 255

Query: 254 LRLVCKMGERVAMSLYKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLK 300
           +RLVC  GE VA SLY+ LESLTSFS+Q+SNLA+ S+ F+LT T+NV+  E DMNLPNLK
Sbjct: 256 VRLVCNKGEGVAPSLYRALESLTSFSVQNSNLATTSEGFVLTFTLNVKESEQDMNLPNLK 315

[Close]
BLAST of CmaCh20G005250 vs. TrEMBL
Match: D7SNA5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0061g00720 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 4.5e-69
Identity = 168/299 (56.19%), Postives = 203/299 (67.89%), Query Frame = 1 

Query: 11  NINEFELQDLIHGDNFDQYVNLIRGGSENPIFD---NLDLDFMNV---DNRLDPSAEYIL 70
           N+ +F   D I+  NF+Q + LIRG S + +     N D + MN    DN+   S   + 
Sbjct: 13  NVTDFGFHDFINEPNFEQLIELIRGESADSLVKFCPNYDCEHMNGCLDDNQFGSSVGELF 72

Query: 71  --DSNIVMNSDPNSLFSSLESFNSIMKEVETEDEDEDDASVENSSVTTSKKSKVDRSRTL 130
             D      S+P+S+  SL S +  MK  E  D ++      N++ T +K +KVDRSRTL
Sbjct: 73  EFDPATATVSNPDSVIDSLPSIDGEMKGGEEIDGEDSSG---NTTTTPTKGTKVDRSRTL 132

Query: 131 ISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLESS 190
           ISERRRR RMKEKLYALRSLVPNITKMDKASIVGDAVLYV++LQ+QAKKLKAEI  LESS
Sbjct: 133 ISERRRRVRMKEKLYALRSLVPNITKMDKASIVGDAVLYVQQLQMQAKKLKAEIGGLESS 192

Query: 191 INETQTSYRGQNH-KNIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKMGERVAMSL 250
           +      Y G       +Q + S   +  KI Q+DVFQVEERGFY+RL C  GERVA+SL
Sbjct: 193 LVLGAERYNGLVEIPKKIQVARSHHPMCGKIFQMDVFQVEERGFYVRLACNRGERVAVSL 252

Query: 251 YKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGALLNHGFEF 301
           YK LESLT FSIQSSNLA+ S+ F+LT T+NVR C+  MNLPNLKLWLTGALLN GFEF
Sbjct: 253 YKALESLTGFSIQSSNLATFSETFVLTFTLNVRECDESMNLPNLKLWLTGALLNQGFEF 308

[Close]
BLAST of CmaCh20G005250 vs. TrEMBL
Match: A0A059DAQ4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03931 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 8.5e-68
Identity = 161/304 (52.96%), Postives = 213/304 (70.07%), Query Frame = 1 

Query: 6   KHLMMNINEFELQDLIHGDNFDQYVNLIRGGSENPI----FDNLDLDFMNVDNRLDPSAE 65
           K+L+MN ++FE    I GDNF+Q +NLI+G S +PI    F++  LD +    ++ P+A 
Sbjct: 8   KNLLMNSDDFEPPYFIEGDNFNQMINLIQGESVHPIMKLGFESALLDGVMSGGQVMPTAG 67

Query: 66  YILDSNIVMNSDPNSLFSSLESFN-SIMKEVETEDEDEDDASVENSSVTTS---KKSKVD 125
                    + + + +  SL S    +M+ +E E+++ED +    ++ T +   K++K D
Sbjct: 68  NAFGYGRTSSINCDFVLDSLPSLGRDVMENLEDENDEEDSSGTTTTTATATTPTKRTKTD 127

Query: 126 RSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEIS 185
           RSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLY++ELQ QAKKLKAEI+
Sbjct: 128 RSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYMQELQTQAKKLKAEIA 187

Query: 186 VLESSINETQT-SYRGQNHKNI-VQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKMGE 245
            LE+S   T   +Y+ QN     +Q ++S   +  KI+Q+DVFQVEERGFY+RLVC  G 
Sbjct: 188 SLEASWAGTGLKTYQAQNETTKRIQAANSNHPVCRKILQMDVFQVEERGFYVRLVCPKGA 247

Query: 246 RVAMSLYKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGALLN 300
            VA SLYK LESL SF +Q+SNLA+AS+RF+ T T+NV+  E D  LP+LKLW+ GALLN
Sbjct: 248 GVAASLYKALESLNSFQVQNSNLATASERFVFTFTLNVKESEQDTTLPDLKLWIAGALLN 307

[Close]
BLAST of CmaCh20G005250 vs. TrEMBL
Match: A5AGT8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009521 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.1e-67
Identity = 166/303 (54.79%), Postives = 203/303 (67.00%), Query Frame = 1 

Query: 11  NINEFELQDLIHGDNFDQYVNLIRGGSENPIFD---NLDLDFMNV---DNRLDPSAEYIL 70
           N+ +F   D I+  NF+Q + LIRG S + +     N D + MN    DN+   S   + 
Sbjct: 13  NVTDFGFHDFINDPNFEQLIELIRGESADSLVKFCPNYDCEHMNGCLDDNQFGSSVGELF 72

Query: 71  DSN------IVMNSDPNSLFSSLESFNSIMKEVETEDEDEDDASVENSSVTTSKKSKVDR 130
           + +          S+P+S+  SL S +  MK  E  D ++      N++ T +K +KVDR
Sbjct: 73  EFDPATATATATVSNPDSVIDSLPSIDGEMKGGEEXDGEDSSG---NTTTTPTKGTKVDR 132

Query: 131 SRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISV 190
           SRTLISERRRR RMKEKLYALRSLVPNITKMDKASIVGDAVLYV++LQ+QAKKLKAEI  
Sbjct: 133 SRTLISERRRRVRMKEKLYALRSLVPNITKMDKASIVGDAVLYVQQLQMQAKKLKAEIXG 192

Query: 191 LESSINETQTSYRGQNH-KNIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKMGERV 250
           LESS+      Y G       +Q + S   +  KI Q+DVFQVEERGFY+RL C  GERV
Sbjct: 193 LESSLVLGAERYNGLVEIPKKIQVACSHHPMCGKIFQMDVFQVEERGFYVRLACNRGERV 252

Query: 251 AMSLYKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGALLNHG 301
           A+SLYK LESLT F IQSSNLA+ S+ F+LT T+NVR C+  MNLPNLKLWLTGALLN G
Sbjct: 253 AVSLYKALESLTGFXIQSSNLATFSETFVLTFTLNVRECDESMNLPNLKLWLTGALLNQG 312

[Close]
BLAST of CmaCh20G005250 vs. TAIR10
Match: AT2G28160.1 (AT2G28160.1 FER-like regulator of iron uptake)

HSP 1 Score: 243.4 bits (620), Expect = 1.7e-64
Identity = 162/317 (51.10%), Postives = 206/317 (64.98%), Query Frame = 1 

Query: 9   MMNINEFELQDLIHGDNFDQYVNLIRGG----SENPIFDNLDLDFMNVDNRLDPSAEYIL 68
           + NIN+ EL + +   NFDQ++NLIRG      ENP+   LD D   + N     +   +
Sbjct: 8   LSNINDLELHNFLVDPNFDQFINLIRGDHQTIDENPV---LDFDLGPLQN-----SPCFI 67

Query: 69  DSNIVMNSDPNSLFSSL--------ESFNSIM--------KEVETEDEDEDDASVENSSV 128
           D N  + +  + LF  L        ESF S          +E E +  D DD+S   ++ 
Sbjct: 68  DENQFIPTPVDDLFDELPDLDSNVAESFRSFDGDSVRAGGEEDEEDYNDGDDSSATTTNN 127

Query: 129 TTSKKSKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQ 188
             ++K+K DRSRTLISERRRRGRMK+KLYALRSLVPNITKMDKASIVGDAVLYV+ELQ Q
Sbjct: 128 DGTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQ 187

Query: 189 AKKLKAEISVLESSINETQTSYRGQNHKNIVQTSHSGQFL----PCKIIQLDVFQVEERG 248
           AKKLK++I+ LE+S+N T   Y  Q H    Q +   + +      KIIQ+DV QVEE+G
Sbjct: 188 AKKLKSDIAGLEASLNST-GGY--QEHAPDAQKTQPFRGINPPASKKIIQMDVIQVEEKG 247

Query: 249 FYLRLVCKMGERVAMSLYKVLESLTSFSIQSSNLASAS-DRFILTATINVRNCEMDMNLP 301
           FY+RLVC  GE VA SLYK LESLTSF +Q+SNL+S S D ++LT T++    E  +NLP
Sbjct: 248 FYVRLVCNKGEGVAPSLYKSLESLTSFQVQNSNLSSPSPDTYLLTYTLDGTCFEQSLNLP 307

[Close]
BLAST of CmaCh20G005250 vs. TAIR10
Match: AT5G57150.4 (AT5G57150.4 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 79.3 bits (194), Expect = 4.4e-15
Identity = 63/187 (33.69%), Postives = 100/187 (53.48%), Query Frame = 1 

Query: 96  EDEDDASVENSSVTTSKKSKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIV 155
           E+    S ++SS   +  S    S+ ++SER RR ++ ++L+ALRS+VPNITKMDKASI+
Sbjct: 33  EEAISGSYDSSSPDGAASSPA--SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASII 92

Query: 156 GDAVLYVKELQVQAKKLKAEISVLESSINETQTSYRGQNH--------KNIVQTSHSGQF 215
            DA+ Y++ LQ + KKL+AEI  LES+   + +  +  +         K + Q       
Sbjct: 93  KDAISYIEGLQYEEKKLEAEIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSST 152

Query: 216 LPCKIIQLDVFQVEERGFYLRLVCKMGERVAMSLYKVLESLTSFSIQSSNLASASDRFIL 275
              ++++L V  + ER   + + C       + L +V ESL +  I +SNL S S     
Sbjct: 153 SLIEVLELKVTFMGERTMVVSVTCNKRTDTMVKLCEVFESL-NLKILTSNLTSFSGMIFH 212

[Close]
BLAST of CmaCh20G005250 vs. TAIR10
Match: AT2G16910.1 (AT2G16910.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 75.5 bits (184), Expect = 6.3e-14
Identity = 64/207 (30.92%), Postives = 106/207 (51.21%), Query Frame = 1 

Query: 96  EDEDDASVENSSVTTSKKSKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIV 155
           +DEDD   +       K  K  +++ L++ERRRR ++ ++LYALRSLVP ITK+D+ASI+
Sbjct: 296 DDEDDPKYKK------KSGKGSQAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASIL 355

Query: 156 GDAVLYVKELQVQAKKLKAEISVLESSINETQTSYRGQNHKNIVQTS-HSGQFLPCKI-- 215
           GDA+ YVKELQ +AK+L+ E+     + + +     G +    V T  H G      +  
Sbjct: 356 GDAINYVKELQNEAKELQDELEENSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPS 415

Query: 216 ------------------IQLDVFQVEERGFYLRLVCKMGERVAMSLYKVLESLTSFSIQ 275
                              Q+DV Q++ R F+++++C   E       +++E+L S  ++
Sbjct: 416 VKQDVDLENSNDKGQEMEPQVDVAQLDGREFFVKVIC---EYKPGGFTRLMEALDSLGLE 475

Query: 276 SSNLASASDRFILTATINVRNCEMDMN 282
            +N   A+    L+   NV   E + N
Sbjct: 476 VTN---ANTTRYLSLVSNVFKVEKNDN 490

[Close]
BLAST of CmaCh20G005250 vs. TAIR10
Match: AT4G29930.3 (AT4G29930.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 71.6 bits (174), Expect = 9.1e-13
Identity = 63/198 (31.82%), Postives = 104/198 (52.53%), Query Frame = 1 

Query: 96  EDEDDASVENSSVTTSKKSKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIV 155
           E+    S E+SS   +  S    S+ ++SER RR ++ ++L+ALRS+VPNI+K+DKAS++
Sbjct: 31  EEAFSGSGESSSPDGAATSPAS-SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVI 90

Query: 156 GDAVLYVKELQVQAKKLKAEISVLES--------------SINETQTSYRGQNH----KN 215
            D++ Y++EL  Q K L+AEI  LES              +  ET       N+    K 
Sbjct: 91  KDSIDYMQELIDQEKTLEAEIRELESRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKK 150

Query: 216 IVQTSHSG--QFLPCKIIQLDVFQVEERGFYLRLVCKMGERVAMSLYKVLESLTSFSIQS 274
             Q  +S   Q  P +++++ V  + E+   + + C       + L KVLESL + +I +
Sbjct: 151 FKQMDYSTRVQHYPIEVLEMKVTWMGEKTVVVCITCSKKRETMVQLCKVLESL-NLNILT 210

[Close]
BLAST of CmaCh20G005250 vs. TAIR10
Match: AT2G46510.1 (AT2G46510.1 ABA-inducible BHLH-type transcription factor)

HSP 1 Score: 65.1 bits (157), Expect = 8.5e-11
Identity = 32/65 (49.23%), Postives = 51/65 (78.46%), Query Frame = 1 

Query: 124 SERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLESSI 183
           +ER+RR ++ ++ YALRS+VPNI+KMDKAS++GDA+ Y+KELQ + K ++ E    + S+
Sbjct: 399 AERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERVGTDKSL 458

Query: 184 NETQT 189
           +E+ T
Sbjct: 459 SESNT 463

[Close]
BLAST of CmaCh20G005250 vs. NCBI nr
Match: gi|449456162|ref|XP_004145819.1| (PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR [Cucumis sativus])

HSP 1 Score: 464.9 bits (1195), Expect = 1.0e-127
Identity = 257/307 (83.71%), Postives = 277/307 (90.23%), Query Frame = 1 

Query: 1   MEHVGKHLMMNINE-FELQDLIHGDNFDQYVNLIRGGSENPIFDN-LDLDFMN---VDNR 60
           ME  G+HLM +IN+ FELQD IHGDNFDQYVNLIRGG+E PIF+N  DLDFMN   ++NR
Sbjct: 1   MEQFGRHLMTDINDQFELQDFIHGDNFDQYVNLIRGGNETPIFNNNFDLDFMNGCLIENR 60

Query: 61  L-DPSAEYILDSNIVMNSDPNSLFSSLESFNSIMKEVETEDEDEDD-ASVENSSVTTSKK 120
           + D S EYI+DSN+VMNSDPNSLFS+LESFNSIMKEVE EDEDED+  SVENSS TTSKK
Sbjct: 61  VVDQSLEYIVDSNMVMNSDPNSLFSTLESFNSIMKEVEDEDEDEDENESVENSSSTTSKK 120

Query: 121 SKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLK 180
            K DR+RTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQ+QAKKLK
Sbjct: 121 PKADRTRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQMQAKKLK 180

Query: 181 AEISVLESSINETQTSYRGQNHKNIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKM 240
           +EISVLESSINETQ  +R Q  K I+QTS+S QFLP KIIQLDVFQVEERGFYLRLVCKM
Sbjct: 181 SEISVLESSINETQKVHRDQTKKKIIQTSYSDQFLPTKIIQLDVFQVEERGFYLRLVCKM 240

Query: 241 GERVAMSLYKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGAL 300
           GERVAMSLYKVLESLTSF IQSSNL SASDRFILTATINVR+CE+DMNLPNLKLWLTGAL
Sbjct: 241 GERVAMSLYKVLESLTSFIIQSSNLTSASDRFILTATINVRDCEVDMNLPNLKLWLTGAL 300

[Close]
BLAST of CmaCh20G005250 vs. NCBI nr
Match: gi|659130918|ref|XP_008465418.1| (PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR [Cucumis melo])

HSP 1 Score: 461.5 bits (1186), Expect = 1.2e-126
Identity = 255/309 (82.52%), Postives = 275/309 (89.00%), Query Frame = 1 

Query: 1   MEHVGKHLMMNINE-FELQDLIHGDNFDQYVNLIRGGSENPIFDN-LDLDFMN----VDN 60
           ME  G+HLM +IN+ FELQD IHGDNFD+YVNLIRGG+E PIF+N  DLDF+N     D 
Sbjct: 1   MEQFGRHLMTDINDQFELQDFIHGDNFDRYVNLIRGGNETPIFNNNFDLDFVNGCLIEDR 60

Query: 61  RLDPSAEYILDSNIVMNSDPNSLFSSLESFNSIMKEVETEDEDEDD---ASVENSSVTTS 120
            +D S EYI+DSN+VMNSDPNSLFS+LESFNSIMKEVE EDEDED+    SVENSS TTS
Sbjct: 61  VVDQSLEYIVDSNMVMNSDPNSLFSTLESFNSIMKEVENEDEDEDEDENESVENSSSTTS 120

Query: 121 KKSKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKK 180
           KK K DR+RTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQ+QAKK
Sbjct: 121 KKPKADRTRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQMQAKK 180

Query: 181 LKAEISVLESSINETQTSYRGQNHKNIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVC 240
           LKAEISVLESSINETQ  +R Q  K I+QTS+S QFLP KIIQLDVFQVEERGFYLRLVC
Sbjct: 181 LKAEISVLESSINETQKIHRDQTKKKIIQTSYSDQFLPTKIIQLDVFQVEERGFYLRLVC 240

Query: 241 KMGERVAMSLYKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTG 300
           KMGERVAMSLYKVLESLT+F IQSSNLASASDRFILTATINVR+CE+DMNLPNLKLWLTG
Sbjct: 241 KMGERVAMSLYKVLESLTNFIIQSSNLASASDRFILTATINVRDCEVDMNLPNLKLWLTG 300

[Close]
BLAST of CmaCh20G005250 vs. NCBI nr
Match: gi|590587834|ref|XP_007016069.1| (Basic helix-loop-helix protein BHLH20, putative [Theobroma cacao])

HSP 1 Score: 284.6 bits (727), Expect = 1.9e-73
Identity = 163/297 (54.88%), Postives = 217/297 (73.06%), Query Frame = 1 

Query: 13  NEFELQDLIHGDNFDQYVNLIRGGSENPIFDNLDLDFMN---VDNRL--DPSAEYILDSN 72
           N+FEL D I   NFDQ+ +LIRG +E+ + D  D D +N   VD ++   P   +  D+ 
Sbjct: 13  NDFELHDFIDDPNFDQFNDLIRGENEDSVAD-FDYDLVNGCFVDKQIRSTPGDAFGFDAT 72

Query: 73  IVMNSDPNSLFSSLESFNSIMKEVETEDEDEDDASVENSSVTT----SKKSKVDRSRTLI 132
             M  DPN ++++L SF+  + +   ED D+DD +   ++ TT    +KK+K+DRSRTLI
Sbjct: 73  SAMVPDPNYIYNALSSFDGDIMKYGEEDNDDDDENSSGTTTTTITTATKKAKLDRSRTLI 132

Query: 133 SERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLESSI 192
           SERRRRGRMKEKLYALRSLVPNITKMDKASI+GDAV YV++LQ+QAKKLKAEI+ LE+S+
Sbjct: 133 SERRRRGRMKEKLYALRSLVPNITKMDKASIIGDAVRYVQDLQMQAKKLKAEIAGLEASL 192

Query: 193 NETQTSYRGQNHKNIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKMGERVAMSLYK 252
             ++      +    +Q + +   +  KI Q+D+FQVEERGFY+RLVC  GE VA+SLYK
Sbjct: 193 AGSERYQEPIDKPVKIQVARNSHPMCKKITQMDMFQVEERGFYIRLVCDKGEGVAVSLYK 252

Query: 253 VLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGALLNHGFEF 301
            LE+LT+F +Q+SNL +AS+RF+LT T+NVR+ E+ MNLPNLKLW+TGALLN GFEF
Sbjct: 253 ALETLTNFKVQNSNLNTASERFVLTFTLNVRDFELSMNLPNLKLWVTGALLNQGFEF 308

[Close]
BLAST of CmaCh20G005250 vs. NCBI nr
Match: gi|743941078|ref|XP_011015019.1| (PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR isoform X1 [Populus euphratica])

HSP 1 Score: 275.4 bits (703), Expect = 1.2e-70
Identity = 169/298 (56.71%), Postives = 213/298 (71.48%), Query Frame = 1 

Query: 14  EFELQDLIHGDNFDQYVNLIRGGSENPIFDNLDLDFMNVDNRLDPSAEYILDSNIV---- 73
           +F+L D I   NFD+Y++LIRG +E   FD   ++   VD++   S     D +++    
Sbjct: 19  QFQLHDFIDEANFDRYIDLIRGENEITAFDCDLINGFLVDSQFGLSTGDTFDCDLINHVP 78

Query: 74  ------MNSDPNSLFSSLESFNSIMKEVETEDEDEDDASVENSSVTTSKKSKVDRSRTLI 133
                 M  DPN +  +L SF+  M     ED DE+D+S    + TT+KK+K DRSRTLI
Sbjct: 79  AHTSSAMEQDPNYVPIALPSFDGDMGLGAEEDTDEEDSS---GTTTTTKKTKKDRSRTLI 138

Query: 134 SERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLESSI 193
           SERRRRGRMKEKLYALRSLVPNITKMDKASI+GDAVLYV+ELQ+QA KLKA+I+ LESS+
Sbjct: 139 SERRRRGRMKEKLYALRSLVPNITKMDKASIIGDAVLYVQELQMQANKLKADIASLESSL 198

Query: 194 NETQTSYRGQNH--KNIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKMGERVAMSL 253
             +   Y+G N   KN   TS++   +  KII++DVFQVEERGFY+RLVC  GE VA SL
Sbjct: 199 IGSD-RYQGSNRNPKNPQNTSNNHP-IRKKIIKMDVFQVEERGFYVRLVCSNGEGVAASL 258

Query: 254 YKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGALLNHGFE 300
           Y+ LESLTSFS+Q+SNLA+ S+ F+LT T+NV+  E DMNLPNLKLW+TGALLN GFE
Sbjct: 259 YRALESLTSFSVQNSNLATTSEGFVLTFTLNVKESEHDMNLPNLKLWVTGALLNQGFE 311

[Close]
BLAST of CmaCh20G005250 vs. NCBI nr
Match: gi|566185695|ref|XP_002313541.2| (basic helix-loop-helix family protein [Populus trichocarpa])

HSP 1 Score: 273.5 bits (698), Expect = 4.5e-70
Identity = 171/313 (54.63%), Postives = 216/313 (69.01%), Query Frame = 1 

Query: 14  EFELQDLIHGDNFDQYVNLIRGGSENPIFDNLDLDFMNVDNRLDPSAEYILDSNIV---- 73
           +F+LQD I   NFD+Y++LIRG +E   FD   ++   VDN+   S     D +++    
Sbjct: 16  QFQLQDFIDEANFDRYIDLIRGENEITAFDCDLINGFLVDNQFGLSTGDKFDCDLINHVP 75

Query: 74  ------MNSDPNSLFSSLESFNSIMKEVETEDEDEDDASVENSSVTTSKKSKVDRSRTLI 133
                 M  DPN +  +L SF+  M     ED DE+D+S    + TT+KK+K DRSRTLI
Sbjct: 76  THTSSAMEQDPNYVPIALPSFDGDMGLEAEEDTDEEDSS---GTATTTKKTKKDRSRTLI 135

Query: 134 SERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLE--- 193
           SERRRRGRMKEKLYALRSLVPNITKMDKASI+GDAVLYV+ELQ+QA KLKA+I+ LE   
Sbjct: 136 SERRRRGRMKEKLYALRSLVPNITKMDKASIIGDAVLYVQELQMQANKLKADIASLELQM 195

Query: 194 ------SSINETQTS------YRGQNH--KNIVQTSHSGQFLPCKIIQLDVFQVEERGFY 253
                 + I   ++S      Y+G N   KN+  TS++   +  KII++DVFQVEERGFY
Sbjct: 196 QANKLKADIASLESSLIGSDRYQGSNRNPKNLQNTSNNHP-IRKKIIKMDVFQVEERGFY 255

Query: 254 LRLVCKMGERVAMSLYKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLK 300
           +RLVC  GE VA SLY+ LESLTSFS+Q+SNLA+ S+ F+LT T+NV+  E DMNLPNLK
Sbjct: 256 VRLVCNKGEGVAPSLYRALESLTSFSVQNSNLATTSEGFVLTFTLNVKESEQDMNLPNLK 315

The following BLAST results are available for this feature:
BLAST of CmaCh20G005250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FIT_ARATH3.1e-6351.10Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR OS=Ar... [more]
BH035_ARATH2.3e-1332.64Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2 SV=1[more]
AMS_ARATH1.1e-1230.92Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana GN=AMS PE=1 SV=... [more]
BH027_ARATH1.6e-1131.82Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2 SV=1[more]
AIB_ARATH1.5e-0949.23Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana GN=AIB PE=2... [more]
BLAST of CmaCh20G005250 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A061GWC5_THECC1.4e-7354.88Basic helix-loop-helix protein BHLH20, putative OS=Theobroma cacao GN=TCM_041590... [more]
B9HQP2_POPTR3.1e-7054.63Basic helix-loop-helix family protein OS=Populus trichocarpa GN=POPTR_0009s01100... [more]
D7SNA5_VITVI4.5e-6956.19Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0061g00720 PE=4 SV=... [more]
A0A059DAQ4_EUCGR8.5e-6852.96Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03931 PE=4 SV=1[more]
A5AGT8_VITVI1.1e-6754.79Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009521 PE=4 SV=1[more]
BLAST of CmaCh20G005250 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G28160.11.7e-6451.10 FER-like regulator of iron uptake[more]
AT5G57150.44.4e-1533.69 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT2G16910.16.3e-1430.92 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT4G29930.39.1e-1331.82 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT2G46510.18.5e-1149.23 ABA-inducible BHLH-type transcription factor[more]
BLAST of CmaCh20G005250 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449456162|ref|XP_004145819.1|1.0e-12783.71PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION F... [more]
gi|659130918|ref|XP_008465418.1|1.2e-12682.52PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION F... [more]
gi|590587834|ref|XP_007016069.1|1.9e-7354.88Basic helix-loop-helix protein BHLH20, putative [Theobroma cacao][more]
gi|743941078|ref|XP_011015019.1|1.2e-7056.71PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION F... [more]
gi|566185695|ref|XP_002313541.2|4.5e-7054.63basic helix-loop-helix family protein [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034756 regulation of iron ion transport
biological_process GO:0010039 response to iron ion
biological_process GO:0050789 regulation of biological process
biological_process GO:0000041 transition metal ion transport
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh20G005250.1CmaCh20G005250.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 118..186
score: 4.1
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 123..166
score: 1.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 122..171
score: 7.9
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 116..165
score: 15
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 118..188
score: 2.09
NoneNo IPR availableunknownCoilCoilcoord: 162..189
scor
NoneNo IPR availablePANTHERPTHR31945FAMILY NOT NAMEDcoord: 9..300
score: 1.9E
NoneNo IPR availablePANTHERPTHR31945:SF17TRANSCRIPTION FACTOR FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTORcoord: 9..300
score: 1.9E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh20G005250Cucsa.385700Cucumber (Gy14) v1cgycmaB1065
CmaCh20G005250Cla008700Watermelon (97103) v1cmawmB524
CmaCh20G005250Csa6G148250Cucumber (Chinese Long) v2cmacuB554
CmaCh20G005250MELO3C026952Melon (DHL92) v3.5.1cmameB489
CmaCh20G005250ClCG02G021600Watermelon (Charleston Gray)cmawcgB481
CmaCh20G005250CSPI06G11920Wild cucumber (PI 183967)cmacpiB560
CmaCh20G005250CmoCh20G005570Cucurbita moschata (Rifu)cmacmoB550
CmaCh20G005250Lsi10G012230Bottle gourd (USVL1VR-Ls)cmalsiB506
CmaCh20G005250Cp4.1LG16g05060Cucurbita pepo (Zucchini)cmacpeB564
CmaCh20G005250Cp4.1LG05g02940Cucurbita pepo (Zucchini)cmacpeB582
CmaCh20G005250MELO3C026952.2Melon (DHL92) v3.6.1cmamedB568
CmaCh20G005250CsaV3_6G014370Cucumber (Chinese Long) v3cmacucB0666
CmaCh20G005250Cla97C02G047660Watermelon (97103) v2cmawmbB568
CmaCh20G005250Bhi10G000103Wax gourdcmawgoB0697
CmaCh20G005250CsGy6G012010Cucumber (Gy14) v2cgybcmaB790
CmaCh20G005250Carg03202Silver-seed gourdcarcmaB0473
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh20G005250CmaCh02G013790Cucurbita maxima (Rimu)cmacmaB479
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh20G005250Watermelon (97103) v2cmawmbB565
CmaCh20G005250Watermelon (97103) v2cmawmbB594
CmaCh20G005250Wax gourdcmawgoB0674
CmaCh20G005250Cucurbita maxima (Rimu)cmacmaB261
CmaCh20G005250Cucurbita maxima (Rimu)cmacmaB490
CmaCh20G005250Cucurbita maxima (Rimu)cmacmaB493
CmaCh20G005250Cucumber (Gy14) v1cgycmaB0842
CmaCh20G005250Cucurbita moschata (Rifu)cmacmoB544
CmaCh20G005250Cucurbita moschata (Rifu)cmacmoB563
CmaCh20G005250Cucurbita moschata (Rifu)cmacmoB569
CmaCh20G005250Wild cucumber (PI 183967)cmacpiB551
CmaCh20G005250Cucumber (Chinese Long) v2cmacuB547
CmaCh20G005250Cucumber (Chinese Long) v2cmacuB561
CmaCh20G005250Melon (DHL92) v3.5.1cmameB520
CmaCh20G005250Watermelon (Charleston Gray)cmawcgB476
CmaCh20G005250Watermelon (Charleston Gray)cmawcgB506
CmaCh20G005250Watermelon (97103) v1cmawmB513
CmaCh20G005250Watermelon (97103) v1cmawmB523
CmaCh20G005250Cucurbita pepo (Zucchini)cmacpeB594
CmaCh20G005250Bottle gourd (USVL1VR-Ls)cmalsiB518
CmaCh20G005250Bottle gourd (USVL1VR-Ls)cmalsiB524
CmaCh20G005250Cucumber (Gy14) v2cgybcmaB388
CmaCh20G005250Cucumber (Gy14) v2cgybcmaB795
CmaCh20G005250Melon (DHL92) v3.6.1cmamedB597
CmaCh20G005250Silver-seed gourdcarcmaB1266
CmaCh20G005250Cucumber (Chinese Long) v3cmacucB0656
CmaCh20G005250Cucumber (Chinese Long) v3cmacucB0672