Carg03202 (gene) Silver-seed gourd

Overview
NameCarg03202
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionTranscription factor
LocationCucurbita_argyrosperma_scaffold_005 : 609418 .. 610812 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCAATCAATTGCCTCATTCAAAGTACTGTAACGTTTGACATGGAGCACGTCGGGAAGCATTTGATGATGAACATCAATGAGTTTGAGCTTCAAGATTTCATCCATGGCGACAACTTCGATCAATATGTGAATCTGATTCGTGGAGGGAGTGAGAATCCGATATTTGATAACCTCGACCTTGATTTTATGAATGTCGACAATCGCCTCGATCCTAGCGCAGAATACATTCTGGATTCCAATATCGTCATGAATTCTGATCCTAATTCTTTGTTTAGTTCATTGGAGAGTTTCAATAGCATCATGAAAGAAGTTGAAAACGAAGATGAAGACGAAGACGATACTTCTGTTGAGAACTCTTCTGTCACAACGTCGAAGAAATCGAAGGTCGATCGATCCAGAACTTTGATTTCCGAGCGTAGGAGAAGAGGAAGGATGAAGGAAAAGCTTTATGCATTGCGTTCATTGGTTCCAAATATAACTAAGGTATGAGAAATCGATACTCACCTTCGAAATTCTATGTTAGGTCATGTAGGTTAGGTCGGCTAGCAATTTTAAATTAGTTAAAATCAAACATGTTCAATTCTAAATTCAAACCGTGGATAATTTTGAAATCGTTAAAATCTCAAGATCATTCAAGAACAATAAATCCTTCTGATGTTTTTTTGAATGAAATGGTTAAAGACCGAATTCATGATGTGGAAAAATGCAGATGGATAAGGCTTCCATTGTTGGGGACGCAGTGCTGTACGTGAAAGAGCTACAAGTGCAGGCGAAGAAGCTGAAAGCGGAGATATCAGTTTTGGAATCCTCAATCAACGAAACACAAACGAGTCATCGAGGTCAAAACCACAAGAAGATTGTTCAAACTTCACATTCTGGCCAATTCCTCCCCTGCAAAATAATTCAGGTACATTTCAAGTTGTAAGATCAGATAAAATTTCATGGTCTGGTCTGGTCTGGTCTGTGATGAAATTTCGAAGCTAAGCTGTGTTAATAATGTGCAATTTGGGGTGTTTTTTTCTTCATCTTTGAAAGCTGGATGTGTTTCAAGTGGAGGAAAGAGGGTTTTATTTGAGGTTGGTCTGCAAGATGGGTGAAAGAGTAGCCATGTCTCTTTACAAGGTTCTTGAATCCCTCACCAGCTTCAGTATTCAAAGCTCCAATTTGGCCTCTGCTTCTGACAGATTCATACTCACAGCTACCATTAATGTAATTACTTTCTTACATACAATCTGATTCTCTTGAGATGAACTTTTTGGTTGCTTCCCAATGGCTCATGTTTTGGCATTGTAATCTGTTCTTCGCAGGTGAGAAATTGTGAGATGGACATGAACTTGCCAAATCTGAAGCTTTGGCTTACGGGGGCACTTCTTAACCATGGATTTGAGTTCTAA

mRNA sequence

ATCAATCAATTGCCTCATTCAAAGTACTGTAACGTTTGACATGGAGCACGTCGGGAAGCATTTGATGATGAACATCAATGAGTTTGAGCTTCAAGATTTCATCCATGGCGACAACTTCGATCAATATGTGAATCTGATTCGTGGAGGGAGTGAGAATCCGATATTTGATAACCTCGACCTTGATTTTATGAATGTCGACAATCGCCTCGATCCTAGCGCAGAATACATTCTGGATTCCAATATCGTCATGAATTCTGATCCTAATTCTTTGTTTAGTTCATTGGAGAGTTTCAATAGCATCATGAAAGAAGTTGAAAACGAAGATGAAGACGAAGACGATACTTCTGTTGAGAACTCTTCTGTCACAACGTCGAAGAAATCGAAGGTCGATCGATCCAGAACTTTGATTTCCGAGCGTAGGAGAAGAGGAAGGATGAAGGAAAAGCTTTATGCATTGCGTTCATTGGTTCCAAATATAACTAAGATGGATAAGGCTTCCATTGTTGGGGACGCAGTGCTGTACGTGAAAGAGCTACAAGTGCAGGCGAAGAAGCTGAAAGCGGAGATATCAGTTTTGGAATCCTCAATCAACGAAACACAAACGAGTCATCGAGGTCAAAACCACAAGAAGATTGTTCAAACTTCACATTCTGGCCAATTCCTCCCCTGCAAAATAATTCAGCTGGATGTGTTTCAAGTGGAGGAAAGAGGGTTTTATTTGAGGTTGGTCTGCAAGATGGGTGAAAGAGTAGCCATGTCTCTTTACAAGGTTCTTGAATCCCTCACCAGCTTCAGTATTCAAAGCTCCAATTTGGCCTCTGCTTCTGACAGATTCATACTCACAGCTACCATTAATGTGAGAAATTGTGAGATGGACATGAACTTGCCAAATCTGAAGCTTTGGCTTACGGGGGCACTTCTTAACCATGGATTTGAGTTCTAA

Coding sequence (CDS)

ATGGAGCACGTCGGGAAGCATTTGATGATGAACATCAATGAGTTTGAGCTTCAAGATTTCATCCATGGCGACAACTTCGATCAATATGTGAATCTGATTCGTGGAGGGAGTGAGAATCCGATATTTGATAACCTCGACCTTGATTTTATGAATGTCGACAATCGCCTCGATCCTAGCGCAGAATACATTCTGGATTCCAATATCGTCATGAATTCTGATCCTAATTCTTTGTTTAGTTCATTGGAGAGTTTCAATAGCATCATGAAAGAAGTTGAAAACGAAGATGAAGACGAAGACGATACTTCTGTTGAGAACTCTTCTGTCACAACGTCGAAGAAATCGAAGGTCGATCGATCCAGAACTTTGATTTCCGAGCGTAGGAGAAGAGGAAGGATGAAGGAAAAGCTTTATGCATTGCGTTCATTGGTTCCAAATATAACTAAGATGGATAAGGCTTCCATTGTTGGGGACGCAGTGCTGTACGTGAAAGAGCTACAAGTGCAGGCGAAGAAGCTGAAAGCGGAGATATCAGTTTTGGAATCCTCAATCAACGAAACACAAACGAGTCATCGAGGTCAAAACCACAAGAAGATTGTTCAAACTTCACATTCTGGCCAATTCCTCCCCTGCAAAATAATTCAGCTGGATGTGTTTCAAGTGGAGGAAAGAGGGTTTTATTTGAGGTTGGTCTGCAAGATGGGTGAAAGAGTAGCCATGTCTCTTTACAAGGTTCTTGAATCCCTCACCAGCTTCAGTATTCAAAGCTCCAATTTGGCCTCTGCTTCTGACAGATTCATACTCACAGCTACCATTAATGTGAGAAATTGTGAGATGGACATGAACTTGCCAAATCTGAAGCTTTGGCTTACGGGGGCACTTCTTAACCATGGATTTGAGTTCTAA

Protein sequence

MEHVGKHLMMNINEFELQDFIHGDNFDQYVNLIRGGSENPIFDNLDLDFMNVDNRLDPSAEYILDSNIVMNSDPNSLFSSLESFNSIMKEVENEDEDEDDTSVENSSVTTSKKSKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLESSINETQTSHRGQNHKKIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKMGERVAMSLYKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGALLNHGFEF
Homology
[Close]
BLAST of Carg03202 vs. NCBI nr
Match: XP_022943777.1 (transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like [Cucurbita moschata] >XP_023513372.1 transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR [Cucurbita pepo subsp. pepo])

HSP 1 Score: 528.1 bits (1359), Expect = 2.0e-146
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0 

Query: 1   MEHVGKHLMMNINEFELQDFIHGDNFDQYVNLIRGGSENPIFDNLDLDFMNVDNRLDPSA 60
           MEHVGKHLMMNINEFELQDFIHGDNFDQYVNLIRGGSENPIFDNLDLDFMNVDNRLDPSA
Sbjct: 1   MEHVGKHLMMNINEFELQDFIHGDNFDQYVNLIRGGSENPIFDNLDLDFMNVDNRLDPSA 60

Query: 61  EYILDSNIVMNSDPNSLFSSLESFNSIMKEVXXXXXXXXXXXXXXXXXXXXXXSKVDRSR 120
           EYILDSNIVMNSDPNSLFSSLESFNSIMKEVXXXXXXXXXXXXXXXXXXXXXXSKVDRSR
Sbjct: 61  EYILDSNIVMNSDPNSLFSSLESFNSIMKEVXXXXXXXXXXXXXXXXXXXXXXSKVDRSR 120

Query: 121 TLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLE 180
           TLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLE
Sbjct: 121 TLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLE 180

Query: 181 SSINETQTSHRGQNHKKIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKMGERVAMS 240
           SSINETQTSHRGQNHKKIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKMGERVAMS
Sbjct: 181 SSINETQTSHRGQNHKKIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKMGERVAMS 240

Query: 241 LYKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGALLNHGFEF 300
           LYKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGALLNHGFEF
Sbjct: 241 LYKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGALLNHGFEF 300

[Close]
BLAST of Carg03202 vs. NCBI nr
Match: XP_022986352.1 (transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like [Cucurbita maxima])

HSP 1 Score: 521.5 bits (1342), Expect = 1.8e-144
Identity = 295/300 (98.33%), Postives = 296/300 (98.67%), Query Frame = 0 

Query: 1   MEHVGKHLMMNINEFELQDFIHGDNFDQYVNLIRGGSENPIFDNLDLDFMNVDNRLDPSA 60
           MEHVGKHLMMNINEFELQD IHGDNFDQYVNLIRGGSENPIFDNLDLDFMNVDNRLDPSA
Sbjct: 1   MEHVGKHLMMNINEFELQDLIHGDNFDQYVNLIRGGSENPIFDNLDLDFMNVDNRLDPSA 60

Query: 61  EYILDSNIVMNSDPNSLFSSLESFNSIMKEVXXXXXXXXXXXXXXXXXXXXXXSKVDRSR 120
           EYILDSNIVMNSDPNSLFSSLESFNSIMKEVXXXXXXXXXXXXXXXXXXXX  SKVDRSR
Sbjct: 61  EYILDSNIVMNSDPNSLFSSLESFNSIMKEVXXXXXXXXXXXXXXXXXXXXKKSKVDRSR 120

Query: 121 TLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLE 180
           TLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLE
Sbjct: 121 TLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLE 180

Query: 181 SSINETQTSHRGQNHKKIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKMGERVAMS 240
           SSINETQTS+RGQNHK IVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKMGERVAMS
Sbjct: 181 SSINETQTSYRGQNHKNIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKMGERVAMS 240

Query: 241 LYKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGALLNHGFEF 300
           LYKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGALLNHGFEF
Sbjct: 241 LYKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGALLNHGFEF 300

[Close]
BLAST of Carg03202 vs. NCBI nr
Match: XP_022140694.1 (transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR [Momordica charantia])

HSP 1 Score: 412.5 bits (1059), Expect = 1.2e-111
Identity = 254/302 (84.11%), Postives = 266/302 (88.08%), Query Frame = 0 

Query: 1   MEHVGKHLMMNINEFELQDFIHGDNFDQYVNLIRGGSENPIFDNLDLDFMNVDNRLDPSA 60
           ME +GK LMMNIN+FELQDFIHGDNFDQYVNLIRG  ENP F N DL             
Sbjct: 4   MEPIGKPLMMNINDFELQDFIHGDNFDQYVNLIRGEPENPTF-NFDL------------- 63

Query: 61  EYILDSNIVMNSDPNSLFSSLESFNSIMKEVXXXXXXXXXXXXXXXXXXXXXXSKVDRSR 120
           EY+LDSNIVMNSDPNSLF SLESFNSIM+EV  XXXXXXXXXXXXXXXXXXXX   DRSR
Sbjct: 64  EYMLDSNIVMNSDPNSLFGSLESFNSIMREV-EXXXXXXXXXXXXXXXXXXXXXXXDRSR 123

Query: 121 TLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLE 180
           TLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQ+QAKKLKAEISVLE
Sbjct: 124 TLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQMQAKKLKAEISVLE 183

Query: 181 SSINETQTSHR--GQNHKKIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKMGERVA 240
           SSINE QT HR   Q+H+KI QTS S QFLP KIIQLDVFQVEERGFYLR+VCKMGE VA
Sbjct: 184 SSINEIQTHHRPTDQSHRKI-QTSRSDQFLPNKIIQLDVFQVEERGFYLRMVCKMGEGVA 243

Query: 241 MSLYKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGALLNHGF 300
           MSLYKVLESLTSF+IQSSNLASASDRFILTATINVR+CE+DMNLPN+KLWLTGALLNHGF
Sbjct: 244 MSLYKVLESLTSFNIQSSNLASASDRFILTATINVRDCEVDMNLPNMKLWLTGALLNHGF 289

[Close]
BLAST of Carg03202 vs. NCBI nr
Match: XP_004145819.1 (PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR [Cucumis sativus])

HSP 1 Score: 402.1 bits (1032), Expect = 1.6e-108
Identity = 249/307 (81.11%), Postives = 266/307 (86.64%), Query Frame = 0 

Query: 1   MEHVGKHLMMNIN-EFELQDFIHGDNFDQYVNLIRGGSENPIF-DNLDLDFMN---VDNR 60
           ME  G+HLM +IN +FELQDFIHGDNFDQYVNLIRGG+E PIF +N DLDFMN   ++NR
Sbjct: 1   MEQFGRHLMTDINDQFELQDFIHGDNFDQYVNLIRGGNETPIFNNNFDLDFMNGCLIENR 60

Query: 61  -LDPSAEYILDSNIVMNSDPNSLFSSLESFNSIMKEV-XXXXXXXXXXXXXXXXXXXXXX 120
            +D S EYI+DSN+VMNSDPNSLFS+LESFNSIMKEV XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  VVDQSLEYIVDSNMVMNSDPNSLFSTLESFNSIMKEVXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 SKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLK 180
                             MKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQ+QAKKLK
Sbjct: 121 XXXXXXXXXXXXXXXXXXMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQMQAKKLK 180

Query: 181 AEISVLESSINETQTSHRGQNHKKIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKM 240
           +EISVLESSINETQ  HR Q  KKI+QTS+S QFLP KIIQLDVFQVEERGFYLRLVCKM
Sbjct: 181 SEISVLESSINETQKVHRDQTKKKIIQTSYSDQFLPTKIIQLDVFQVEERGFYLRLVCKM 240

Query: 241 GERVAMSLYKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGAL 300
           GERVAMSLYKVLESLTSF IQSSNL SASDRFILTATINVR+CE+DMNLPNLKLWLTGAL
Sbjct: 241 GERVAMSLYKVLESLTSFIIQSSNLTSASDRFILTATINVRDCEVDMNLPNLKLWLTGAL 300

[Close]
BLAST of Carg03202 vs. NCBI nr
Match: XP_008465418.1 (PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR isoform X1 [Cucumis melo])

HSP 1 Score: 398.3 bits (1022), Expect = 2.3e-107
Identity = 247/309 (79.94%), Postives = 264/309 (85.44%), Query Frame = 0 

Query: 1   MEHVGKHLMMNIN-EFELQDFIHGDNFDQYVNLIRGGSENPIF-DNLDLDFMN----VDN 60
           ME  G+HLM +IN +FELQDFIHGDNFD+YVNLIRGG+E PIF +N DLDF+N     D 
Sbjct: 1   MEQFGRHLMTDINDQFELQDFIHGDNFDRYVNLIRGGNETPIFNNNFDLDFVNGCLIEDR 60

Query: 61  RLDPSAEYILDSNIVMNSDPNSLFSSLESFNSIMKEV---XXXXXXXXXXXXXXXXXXXX 120
            +D S EYI+DSN+VMNSDPNSLFS+LESFNSIMKEV   XXXXXXXXXXXXXXXXXXXX
Sbjct: 61  VVDQSLEYIVDSNMVMNSDPNSLFSTLESFNSIMKEVXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXSKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKK 180
           XX                  MKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQ+QAKK
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQMQAKK 180

Query: 181 LKAEISVLESSINETQTSHRGQNHKKIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVC 240
           LKAEISVLESSINETQ  HR Q  KKI+QTS+S QFLP KIIQLDVFQVEERGFYLRLVC
Sbjct: 181 LKAEISVLESSINETQKIHRDQTKKKIIQTSYSDQFLPTKIIQLDVFQVEERGFYLRLVC 240

Query: 241 KMGERVAMSLYKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTG 300
           KMGERVAMSLYKVLESLT+F IQSSNLASASDRFILTATINVR+CE+DMNLPNLKLWLTG
Sbjct: 241 KMGERVAMSLYKVLESLTNFIIQSSNLASASDRFILTATINVRDCEVDMNLPNLKLWLTG 300

[Close]
BLAST of Carg03202 vs. TAIR10
Match: AT2G28160.1 (FER-like regulator of iron uptake)

HSP 1 Score: 234.2 bits (596), Expect = 1.1e-61
Identity = 175/317 (55.21%), Postives = 214/317 (67.51%), Query Frame = 0 

Query: 9   MMNINEFELQDFIHGDNFDQYVNLIRGG----SENPIFDNLDLDFMNVDNRLDPSAEYIL 68
           + NIN+ EL +F+   NFDQ++NLIRG      ENP+   LD D   + N     +   +
Sbjct: 8   LSNINDLELHNFLVDPNFDQFINLIRGDHQTIDENPV---LDFDLGPLQN-----SPCFI 67

Query: 69  DSNIVMNSDPNSLFSSLESFNSIMKE----------------VXXXXXXXXXXXXXXXXX 128
           D N  + +  + LF  L   +S + E                 XXXXXXXXXXXXXXXXX
Sbjct: 68  DENQFIPTPVDDLFDELPDLDSNVAESFRSFDGDSVRAXXXXXXXXXXXXXXXXXXXXXX 127

Query: 129 XXXXXSKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQ 188
           XXXXX+K DRSRTLISERRRRGRMK+KLYALRSLVPNITKMDKASIVGDAVLYV+ELQ Q
Sbjct: 128 XXXXXTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQ 187

Query: 189 AKKLKAEISVLESSINETQTSHRGQNHKKIVQTSHSGQFL----PCKIIQLDVFQVEERG 248
           AKKLK++I+ LE+S+N T      Q H    Q +   + +      KIIQ+DV QVEE+G
Sbjct: 188 AKKLKSDIAGLEASLNSTGGY---QEHAPDAQKTQPFRGINPPASKKIIQMDVIQVEEKG 247

Query: 249 FYLRLVCKMGERVAMSLYKVLESLTSFSIQSSNLASAS-DRFILTATINVRNCEMDMNLP 301
           FY+RLVC  GE VA SLYK LESLTSF +Q+SNL+S S D ++LT T++    E  +NLP
Sbjct: 248 FYVRLVCNKGEGVAPSLYKSLESLTSFQVQNSNLSSPSPDTYLLTYTLDGTCFEQSLNLP 307

[Close]
BLAST of Carg03202 vs. TAIR10
Match: AT5G57150.4 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 86.7 bits (213), Expect = 2.7e-17
Identity = 59/164 (35.98%), Postives = 92/164 (56.10%), Query Frame = 0 

Query: 119 SRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISV 178
           S+ ++SER RR ++ ++L+ALRS+VPNITKMDKASI+ DA+ Y++ LQ + KKL+AEI  
Sbjct: 54  SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 113

Query: 179 LESSINETQTSHRGQNH--------KKIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLV 238
           LES+   + +  +  +         KK+ Q          ++++L V  + ER   + + 
Sbjct: 114 LESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVT 173

Query: 239 CKMGERVAMSLYKVLESLTSFSIQSSNLASASDRFILTATINVR 275
           C       + L +V ESL +  I +SNL S S     T  I +R
Sbjct: 174 CNKRTDTMVKLCEVFESL-NLKILTSNLTSFSGMIFHTVFIELR 216

[Close]
BLAST of Carg03202 vs. TAIR10
Match: AT4G29930.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 79.0 bits (193), Expect = 5.7e-15
Identity = 58/175 (33.14%), Postives = 96/175 (54.86%), Query Frame = 0 

Query: 119 SRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISV 178
           S+ ++SER RR ++ ++L+ALRS+VPNI+K+DKAS++ D++ Y++EL  Q K L+AEI  
Sbjct: 53  SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112

Query: 179 LES--------------SINETQTSHRGQNH----KKIVQTSHSG--QFLPCKIIQLDVF 238
           LES              +  ET       N+    KK  Q  +S   Q  P +++++ V 
Sbjct: 113 LESRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVT 172

Query: 239 QVEERGFYLRLVCKMGERVAMSLYKVLESLTSFSIQSSNLASASDRFILTATINV 274
            + E+   + + C       + L KVLESL + +I ++N +S + R   T  + V
Sbjct: 173 WMGEKTVVVCITCSKKRETMVQLCKVLESL-NLNILTTNFSSFTSRLSTTLFLQV 226

[Close]
BLAST of Carg03202 vs. TAIR10
Match: AT2G46510.1 (ABA-inducible BHLH-type transcription factor)

HSP 1 Score: 65.9 bits (159), Expect = 5.0e-11
Identity = 32/65 (49.23%), Postives = 51/65 (78.46%), Query Frame = 0 

Query: 124 SERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLESSI 183
           +ER+RR ++ ++ YALRS+VPNI+KMDKAS++GDA+ Y+KELQ + K ++ E    + S+
Sbjct: 399 AERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERVGTDKSL 458

Query: 184 NETQT 189
           +E+ T
Sbjct: 459 SESNT 463

[Close]
BLAST of Carg03202 vs. TAIR10
Match: AT2G16910.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 63.2 bits (152), Expect = 3.2e-10
Identity = 30/50 (60.00%), Postives = 43/50 (86.00%), Query Frame = 0 

Query: 115 KVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKE 165
           K  +++ L++ERRRR ++ ++LYALRSLVP ITK+D+ASI+GDA+ YVKE
Sbjct: 309 KGSQAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKE 358

[Close]
BLAST of Carg03202 vs. Swiss-Prot
Match: sp|Q0V7X4|FIT_ARATH (Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR OS=Arabidopsis thaliana OX=3702 GN=FIT PE=1 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.9e-60
Identity = 175/317 (55.21%), Postives = 214/317 (67.51%), Query Frame = 0 

Query: 9   MMNINEFELQDFIHGDNFDQYVNLIRGG----SENPIFDNLDLDFMNVDNRLDPSAEYIL 68
           + NIN+ EL +F+   NFDQ++NLIRG      ENP+   LD D   + N     +   +
Sbjct: 8   LSNINDLELHNFLVDPNFDQFINLIRGDHQTIDENPV---LDFDLGPLQN-----SPCFI 67

Query: 69  DSNIVMNSDPNSLFSSLESFNSIMKE----------------VXXXXXXXXXXXXXXXXX 128
           D N  + +  + LF  L   +S + E                 XXXXXXXXXXXXXXXXX
Sbjct: 68  DENQFIPTPVDDLFDELPDLDSNVAESFRSFDGDSVRAXXXXXXXXXXXXXXXXXXXXXX 127

Query: 129 XXXXXSKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQ 188
           XXXXX+K DRSRTLISERRRRGRMK+KLYALRSLVPNITKMDKASIVGDAVLYV+ELQ Q
Sbjct: 128 XXXXXTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQ 187

Query: 189 AKKLKAEISVLESSINETQTSHRGQNHKKIVQTSHSGQFL----PCKIIQLDVFQVEERG 248
           AKKLK++I+ LE+S+N T      Q H    Q +   + +      KIIQ+DV QVEE+G
Sbjct: 188 AKKLKSDIAGLEASLNSTGGY---QEHAPDAQKTQPFRGINPPASKKIIQMDVIQVEEKG 247

Query: 249 FYLRLVCKMGERVAMSLYKVLESLTSFSIQSSNLASAS-DRFILTATINVRNCEMDMNLP 301
           FY+RLVC  GE VA SLYK LESLTSF +Q+SNL+S S D ++LT T++    E  +NLP
Sbjct: 248 FYVRLVCNKGEGVAPSLYKSLESLTSFQVQNSNLSSPSPDTYLLTYTLDGTCFEQSLNLP 307

[Close]
BLAST of Carg03202 vs. Swiss-Prot
Match: sp|Q2HIV9|BH035_ARATH (Transcription factor bHLH35 OS=Arabidopsis thaliana OX=3702 GN=BHLH35 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.4e-15
Identity = 59/170 (34.71%), Postives = 93/170 (54.71%), Query Frame = 0 

Query: 119 SRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISV 178
           S+ ++SER RR ++ ++L+ALRS+VPNITKMDKASI+ DA+ Y++ LQ + KKL+AEI  
Sbjct: 54  SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 113

Query: 179 LESSINETQTSHRGQNH--------KKIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLV 238
           LES+   + +  +  +         KK+ Q          ++++L V  + ER   + + 
Sbjct: 114 LESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVT 173

Query: 239 CKMGERVAMSLYKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDM 281
           C       + L +V ESL +  I +SNL S S     T  I     E ++
Sbjct: 174 CNKRTDTMVKLCEVFESL-NLKILTSNLTSFSGMIFHTVFIEADEEEQEV 222

[Close]
BLAST of Carg03202 vs. Swiss-Prot
Match: sp|Q700E3|BH027_ARATH (Transcription factor bHLH27 OS=Arabidopsis thaliana OX=3702 GN=BHLH27 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.0e-13
Identity = 58/175 (33.14%), Postives = 96/175 (54.86%), Query Frame = 0 

Query: 119 SRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISV 178
           S+ ++SER RR ++ ++L+ALRS+VPNI+K+DKAS++ D++ Y++EL  Q K L+AEI  
Sbjct: 53  SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112

Query: 179 LES--------------SINETQTSHRGQNH----KKIVQTSHSG--QFLPCKIIQLDVF 238
           LES              +  ET       N+    KK  Q  +S   Q  P +++++ V 
Sbjct: 113 LESRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVT 172

Query: 239 QVEERGFYLRLVCKMGERVAMSLYKVLESLTSFSIQSSNLASASDRFILTATINV 274
            + E+   + + C       + L KVLESL + +I ++N +S + R   T  + V
Sbjct: 173 WMGEKTVVVCITCSKKRETMVQLCKVLESL-NLNILTTNFSSFTSRLSTTLFLQV 226

[Close]
BLAST of Carg03202 vs. Swiss-Prot
Match: sp|Q9ZPY8|AIB_ARATH (Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana OX=3702 GN=AIB PE=2 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 9.0e-10
Identity = 32/65 (49.23%), Postives = 51/65 (78.46%), Query Frame = 0 

Query: 124 SERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLESSI 183
           +ER+RR ++ ++ YALRS+VPNI+KMDKAS++GDA+ Y+KELQ + K ++ E    + S+
Sbjct: 399 AERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERVGTDKSL 458

Query: 184 NETQT 189
           +E+ T
Sbjct: 459 SESNT 463

[Close]
BLAST of Carg03202 vs. Swiss-Prot
Match: sp|Q9ZVX2|AMS_ARATH (Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana OX=3702 GN=AMS PE=1 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 5.8e-09
Identity = 30/50 (60.00%), Postives = 43/50 (86.00%), Query Frame = 0 

Query: 115 KVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKE 165
           K  +++ L++ERRRR ++ ++LYALRSLVP ITK+D+ASI+GDA+ YVKE
Sbjct: 309 KGSQAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKE 358

[Close]
BLAST of Carg03202 vs. TrEMBL
Match: tr|A0A1S3CQB6|A0A1S3CQB6_CUCME (transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503037 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 1.5e-107
Identity = 247/309 (79.94%), Postives = 264/309 (85.44%), Query Frame = 0 

Query: 1   MEHVGKHLMMNIN-EFELQDFIHGDNFDQYVNLIRGGSENPIF-DNLDLDFMN----VDN 60
           ME  G+HLM +IN +FELQDFIHGDNFD+YVNLIRGG+E PIF +N DLDF+N     D 
Sbjct: 1   MEQFGRHLMTDINDQFELQDFIHGDNFDRYVNLIRGGNETPIFNNNFDLDFVNGCLIEDR 60

Query: 61  RLDPSAEYILDSNIVMNSDPNSLFSSLESFNSIMKEV---XXXXXXXXXXXXXXXXXXXX 120
            +D S EYI+DSN+VMNSDPNSLFS+LESFNSIMKEV   XXXXXXXXXXXXXXXXXXXX
Sbjct: 61  VVDQSLEYIVDSNMVMNSDPNSLFSTLESFNSIMKEVXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXSKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKK 180
           XX                  MKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQ+QAKK
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQMQAKK 180

Query: 181 LKAEISVLESSINETQTSHRGQNHKKIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVC 240
           LKAEISVLESSINETQ  HR Q  KKI+QTS+S QFLP KIIQLDVFQVEERGFYLRLVC
Sbjct: 181 LKAEISVLESSINETQKIHRDQTKKKIIQTSYSDQFLPTKIIQLDVFQVEERGFYLRLVC 240

Query: 241 KMGERVAMSLYKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTG 300
           KMGERVAMSLYKVLESLT+F IQSSNLASASDRFILTATINVR+CE+DMNLPNLKLWLTG
Sbjct: 241 KMGERVAMSLYKVLESLTNFIIQSSNLASASDRFILTATINVRDCEVDMNLPNLKLWLTG 300

[Close]
BLAST of Carg03202 vs. TrEMBL
Match: tr|A0A1S4E5Y5|A0A1S4E5Y5_CUCME (transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503037 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 8.3e-69
Identity = 191/309 (61.81%), Postives = 207/309 (66.99%), Query Frame = 0 

Query: 1   MEHVGKHLMMNIN-EFELQDFIHGDNFDQYVNLIRGGSENPIF-DNLDLDFMN----VDN 60
           ME  G+HLM +IN +FELQDFIHGDNFD+YVNLIRGG+E PIF +N DLDF+N     D 
Sbjct: 1   MEQFGRHLMTDINDQFELQDFIHGDNFDRYVNLIRGGNETPIFNNNFDLDFVNGCLIEDR 60

Query: 61  RLDPSAEYILDSNIVMNSDPNSLFSSLESFNSIMKEV---XXXXXXXXXXXXXXXXXXXX 120
            +D S EYI+DSN+VMNSDPNSLFS+LESFNSIMKEV   XXXXXXXXXXXXXXXXXXXX
Sbjct: 61  VVDQSLEYIVDSNMVMNSDPNSLFSTLESFNSIMKEVXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXSKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKK 180
           XX                  MKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQ+QAKK
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQMQAKK 180

Query: 181 LKAEISVLESSINETQTSHRGQNHKKIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVC 240
           LKAEISVLESSINETQ  HR Q  KKI+QTS+S QFLP KIIQ                 
Sbjct: 181 LKAEISVLESSINETQKIHRDQTKKKIIQTSYSDQFLPTKIIQ----------------- 240

Query: 241 KMGERVAMSLYKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTG 300
                                                    VR+CE+DMNLPNLKLWLTG
Sbjct: 241 -----------------------------------------VRDCEVDMNLPNLKLWLTG 251

[Close]
BLAST of Carg03202 vs. TrEMBL
Match: tr|A0A1R3J699|A0A1R3J699_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_19192 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.4e-68
Identity = 177/299 (59.20%), Postives = 220/299 (73.58%), Query Frame = 0 

Query: 13  NEFELQDFIHGDNFDQYVNLIRGGSENPIFDNLDLDFMN----------VDNRLDPSAEY 72
           N+FEL+DFI   NFDQ+++LIRG +E      LD D +N          ++  +     +
Sbjct: 14  NDFELRDFIDDPNFDQFIDLIRGENEESNIAGLDYDLINGCFVEKPQLQINATVPVDNGF 73

Query: 73  ILDSNIVMNSDPNSLFSSLESFN-SIMKEVXXXXXXXXXXXXXXXXXXXXXXSKVDRSRT 132
             D+   M  DPN +F++L SF+  IMK+  XXXXXXXXXXXXXXXXXXXXX  VDRSRT
Sbjct: 74  GFDATSAMVPDPNYIFNTLSSFDGDIMKDGDXXXXXXXXXXXXXXXXXXXXXXXVDRSRT 133

Query: 133 LISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLES 192
           LISERRRRGRMKEKLYALRSLVPNITKMDKASI+GDAVLYV++LQ+Q++KLKAEIS LE+
Sbjct: 134 LISERRRRGRMKEKLYALRSLVPNITKMDKASIIGDAVLYVQDLQMQSRKLKAEISGLEA 193

Query: 193 SINETQTSHRGQNHKKIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKMGERVAMSL 252
           S+  ++      N+   V+ +H    +  KI QLD+FQVEERGFY++LV   GE VA SL
Sbjct: 194 SLAGSERYQESMNNPAKVRVNHP---ICKKIFQLDMFQVEERGFYIKLVSNKGEGVAASL 253

Query: 253 YKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGALLNHGFEF 301
           YK LESL++F++Q+SNL +  DRF LT T+NVR+ E  MNLPNLKLW+TGALLN GFEF
Sbjct: 254 YKALESLSNFNVQNSNLTTVYDRFSLTFTLNVRDSEQSMNLPNLKLWVTGALLNQGFEF 309

[Close]
BLAST of Carg03202 vs. TrEMBL
Match: tr|A0A061GWC5|A0A061GWC5_THECC (Basic helix-loop-helix protein BHLH20, putative OS=Theobroma cacao OX=3641 GN=TCM_041590 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 7.0e-68
Identity = 180/297 (60.61%), Postives = 224/297 (75.42%), Query Frame = 0 

Query: 13  NEFELQDFIHGDNFDQYVNLIRGGSENPIFDNLDLDFMN---VDN--RLDPSAEYILDSN 72
           N+FEL DFI   NFDQ+ +LIRG +E+ + D  D D +N   VD   R  P   +  D+ 
Sbjct: 13  NDFELHDFIDDPNFDQFNDLIRGENEDSVAD-FDYDLVNGCFVDKQIRSTPGDAFGFDAT 72

Query: 73  IVMNSDPNSLFSSLESFN-SIMK---EVXXXXXXXXXXXXXXXXXXXXXXSKVDRSRTLI 132
             M  DPN ++++L SF+  IMK     XXXXXXXXXXXXXXXXXXXXXX  +DRSRTLI
Sbjct: 73  SAMVPDPNYIYNALSSFDGDIMKYGEXXXXXXXXXXXXXXXXXXXXXXXXXXLDRSRTLI 132

Query: 133 SERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLESSI 192
           SERRRRGRMKEKLYALRSLVPNITKMDKASI+GDAV YV++LQ+QAKKLKAEI+ LE+S+
Sbjct: 133 SERRRRGRMKEKLYALRSLVPNITKMDKASIIGDAVRYVQDLQMQAKKLKAEIAGLEASL 192

Query: 193 NETQTSHRGQNHKKIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKMGERVAMSLYK 252
             ++      +    +Q + +   +  KI Q+D+FQVEERGFY+RLVC  GE VA+SLYK
Sbjct: 193 AGSERYQEPIDKPVKIQVARNSHPMCKKITQMDMFQVEERGFYIRLVCDKGEGVAVSLYK 252

Query: 253 VLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGALLNHGFEF 301
            LE+LT+F +Q+SNL +AS+RF+LT T+NVR+ E+ MNLPNLKLW+TGALLN GFEF
Sbjct: 253 ALETLTNFKVQNSNLNTASERFVLTFTLNVRDFELSMNLPNLKLWVTGALLNQGFEF 308

[Close]
BLAST of Carg03202 vs. TrEMBL
Match: tr|D7SNA5|D7SNA5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0061g00720 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 6.0e-67
Identity = 164/299 (54.85%), Postives = 195/299 (65.22%), Query Frame = 0 

Query: 11  NINEFELQDFIHGDNFDQYVNLIRGGSENPIF---DNLDLDFMN---VDNRLDPSAE--Y 70
           N+ +F   DFI+  NF+Q + LIRG S + +     N D + MN    DN+   S    +
Sbjct: 13  NVTDFGFHDFINEPNFEQLIELIRGESADSLVKFCPNYDCEHMNGCLDDNQFGSSVGELF 72

Query: 71  ILDSNIVMNSDPNSLFSSLESFNSIMKEVXXXXXXXXXXXXXXXXXXXXXXSKVDRSRTL 130
             D      S+P+S+  SL S +  MK                        +KVDRSRTL
Sbjct: 73  EFDPATATVSNPDSVIDSLPSIDGEMK---GGEEIDGEDSSGNTTTTPTKGTKVDRSRTL 132

Query: 131 ISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVKELQVQAKKLKAEISVLESS 190
           ISERRRR RMKEKLYALRSLVPNITKMDKASIVGDAVLYV++LQ+QAKKLKAEI  LESS
Sbjct: 133 ISERRRRVRMKEKLYALRSLVPNITKMDKASIVGDAVLYVQQLQMQAKKLKAEIGGLESS 192

Query: 191 INETQTSHRG-QNHKKIVQTSHSGQFLPCKIIQLDVFQVEERGFYLRLVCKMGERVAMSL 250
           +      + G     K +Q + S   +  KI Q+DVFQVEERGFY+RL C  GERVA+SL
Sbjct: 193 LVLGAERYNGLVEIPKKIQVARSHHPMCGKIFQMDVFQVEERGFYVRLACNRGERVAVSL 252

Query: 251 YKVLESLTSFSIQSSNLASASDRFILTATINVRNCEMDMNLPNLKLWLTGALLNHGFEF 301
           YK LESLT FSIQSSNLA+ S+ F+LT T+NVR C+  MNLPNLKLWLTGALLN GFEF
Sbjct: 253 YKALESLTGFSIQSSNLATFSETFVLTFTLNVRECDESMNLPNLKLWLTGALLNQGFEF 308

The following BLAST results are available for this feature:
BLAST of Carg03202 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022943777.12.0e-146100.00transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like ... [more]
XP_022986352.11.8e-14498.33transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like ... [more]
XP_022140694.11.2e-11184.11transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR [Momo... [more]
XP_004145819.11.6e-10881.11PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION F... [more]
XP_008465418.12.3e-10779.94PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION F... [more]
BLAST of Carg03202 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G28160.11.1e-6155.21FER-like regulator of iron uptake[more]
AT5G57150.42.7e-1735.98basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT4G29930.35.7e-1533.14basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT2G46510.15.0e-1149.23ABA-inducible BHLH-type transcription factor[more]
AT2G16910.13.2e-1060.00basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of Carg03202 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q0V7X4|FIT_ARATH1.9e-6055.21Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR OS=Ar... [more]
sp|Q2HIV9|BH035_ARATH1.4e-1534.71Transcription factor bHLH35 OS=Arabidopsis thaliana OX=3702 GN=BHLH35 PE=2 SV=1[more]
sp|Q700E3|BH027_ARATH1.0e-1333.14Transcription factor bHLH27 OS=Arabidopsis thaliana OX=3702 GN=BHLH27 PE=2 SV=1[more]
sp|Q9ZPY8|AIB_ARATH9.0e-1049.23Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana OX=3702 GN=... [more]
sp|Q9ZVX2|AMS_ARATH5.8e-0960.00Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana OX=3702 GN=AMS ... [more]
BLAST of Carg03202 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CQB6|A0A1S3CQB6_CUCME1.5e-10779.94transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR isofo... [more]
tr|A0A1S4E5Y5|A0A1S4E5Y5_CUCME8.3e-6961.81transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR isofo... [more]
tr|A0A1R3J699|A0A1R3J699_9ROSI2.4e-6859.20Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_19192 PE=4 SV=1[more]
tr|A0A061GWC5|A0A061GWC5_THECC7.0e-6860.61Basic helix-loop-helix protein BHLH20, putative OS=Theobroma cacao OX=3641 GN=TC... [more]
tr|D7SNA5|D7SNA5_VITVI6.0e-6754.85Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0061g00720 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Vocabulary: INTERPRO
TermDefinition
IPR036638HLH_DNA-bd_sf
IPR011598bHLH_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg03202-RACarg03202-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 162..189
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..121
NoneNo IPR availablePANTHERPTHR31945FAMILY NOT NAMEDcoord: 70..300
NoneNo IPR availablePANTHERPTHR31945:SF17TRANSCRIPTION FACTOR FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTORcoord: 70..300
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 122..171
e-value: 7.9E-14
score: 61.9
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 123..166
e-value: 9.8E-9
score: 35.0
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 116..165
score: 15.237
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainCDDcd00083HLHcoord: 118..168
e-value: 9.33531E-11
score: 55.6831
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3DG3DSA:4.10.280.10coord: 106..167
e-value: 1.8E-14
score: 55.3
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILYSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 118..188

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg03202Cla008700Watermelon (97103) v1carwmB0330
Carg03202Csa6G148250Cucumber (Chinese Long) v2carcuB0371
Carg03202MELO3C026952Melon (DHL92) v3.5.1carmeB0340
Carg03202ClCG02G021600Watermelon (Charleston Gray)carwcgB0327
Carg03202CSPI06G11920Wild cucumber (PI 183967)carcpiB0374
Carg03202Cucsa.385700Cucumber (Gy14) v1carcgyB0403
Carg03202CmaCh02G013790Cucurbita maxima (Rimu)carcmaB0474
Carg03202CmaCh20G005250Cucurbita maxima (Rimu)carcmaB0473
Carg03202CmoCh20G005570Cucurbita moschata (Rifu)carcmoB0464
Carg03202Lsi10G012230Bottle gourd (USVL1VR-Ls)carlsiB303
Carg03202Cp4.1LG16g05060Cucurbita pepo (Zucchini)carcpeB0465
Carg03202Cp4.1LG05g02940Cucurbita pepo (Zucchini)carcpeB0480
Carg03202CsGy6G012010Cucumber (Gy14) v2carcgybB0351
Carg03202MELO3C026952.2Melon (DHL92) v3.6.1carmedB0346
Carg03202CsaV3_6G014370Cucumber (Chinese Long) v3carcucB0375
Carg03202Cla97C02G047660Watermelon (97103) v2carwmbB0346
Carg03202Bhi10G000103Wax gourdcarwgoB0421
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg03202Carg02590Silver-seed gourdcarcarB366
The following block(s) are covering this gene:
GeneOrganismBlock
Carg03202Wax gourdcarwgoB0415
Carg03202Wax gourdcarwgoB0423
Carg03202Silver-seed gourdcarcarB187
Carg03202Silver-seed gourdcarcarB287
Carg03202Cucurbita maxima (Rimu)carcmaB0482
Carg03202Cucurbita moschata (Rifu)carcmoB0460
Carg03202Cucurbita moschata (Rifu)carcmoB0465
Carg03202Cucurbita moschata (Rifu)carcmoB0469
Carg03202Watermelon (97103) v2carwmbB0340
Carg03202Watermelon (97103) v2carwmbB0353