CmoCh19G010140 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G010140
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Epidermal patterning factor, putative
Location	Cmo_Chr19 : 8954156 .. 8954612 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAAGGAACCTCTTTTCTTGAACTTCTACTCCAAAACCATGAAGGGTTCGACTTGGTTTTCTATTATCTTCATTGCTTTCTTACTTTTCCCAACACCCATTTCCTCACAACGCATTTCTCACCAGAACTCACGTAATCACTCATACCTTCAACACCCATTTCATGTCTTCAATGCTTTTCTTCGTTCCGCCATGAACTAACCTTCATGACTTGTGTGCAGGTCATGTCCACCACCGCAAGATGGCGGCAGAAGAGGCGGCGATGGGGAGAAAAGGGGTGGAGACAGTTGAAGTAGCAGGGTCGAGCTTGCCGGACTGCTCGCATGCGTGTGCCTCGTGCTCGCCGTGCAGACTAGTGATGATAAGTTTTGTTTGTGCTTCACTTCAGGAAGCTGAAACATGTCCAATGGCTTATAGATGCATGTGCAATAACAAGTCCTATCCTCTTCCTTAA

mRNA sequence

ATGAAAAAGGAACCTCTTTTCTTGAACTTCTACTCCAAAACCATGAAGGGTTCGACTTGGTTTTCTATTATCTTCATTGCTTTCTTACTTTTCCCAACACCCATTTCCTCACAACGCATTTCTCACCAGAACTCACGTCATGTCCACCACCGCAAGATGGCGGCAGAAGAGGCGGCGATGGGGAGAAAAGGGGTGGAGACAGTTGAAGTAGCAGGGTCGAGCTTGCCGGACTGCTCGCATGCGTGTGCCTCGTGCTCGCCGTGCAGACTAGTGATGATAAGTTTTGTTTGTGCTTCACTTCAGGAAGCTGAAACATGTCCAATGGCTTATAGATGCATGTGCAATAACAAGTCCTATCCTCTTCCTTAA

Coding sequence (CDS)

ATGAAAAAGGAACCTCTTTTCTTGAACTTCTACTCCAAAACCATGAAGGGTTCGACTTGGTTTTCTATTATCTTCATTGCTTTCTTACTTTTCCCAACACCCATTTCCTCACAACGCATTTCTCACCAGAACTCACGTCATGTCCACCACCGCAAGATGGCGGCAGAAGAGGCGGCGATGGGGAGAAAAGGGGTGGAGACAGTTGAAGTAGCAGGGTCGAGCTTGCCGGACTGCTCGCATGCGTGTGCCTCGTGCTCGCCGTGCAGACTAGTGATGATAAGTTTTGTTTGTGCTTCACTTCAGGAAGCTGAAACATGTCCAATGGCTTATAGATGCATGTGCAATAACAAGTCCTATCCTCTTCCTTAA

Homology

[Close]

BLAST of CmoCh19G010140 vs. Swiss-Prot
Match: EPF1_ARATH (Protein EPIDERMAL PATTERNING FACTOR 1 OS=Arabidopsis thaliana GN=EPF1 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.0e-24
Identity = 52/79 (65.82%), Postives = 61/79 (77.22%), Query Frame = 1


Query: 44  NSRHVHHRKMAAEEAAMGRKGVETVEVAGSSLPDCSHACASCSPCRLVMISFVCASLQEA 103
           +S   HH           R+  +TV+VAGS LPDCSHAC SCSPCRLVM+SFVCAS++EA
Sbjct: 26  SSHPSHHHVGMTGALKRQRRRPDTVQVAGSRLPDCSHACGSCSPCRLVMVSFVCASVEEA 85

Query: 104 ETCPMAYRCMCNNKSYPLP 123
           ETCPMAY+CMCNNKSYP+P
Sbjct: 86  ETCPMAYKCMCNNKSYPVP 104

[Close]

BLAST of CmoCh19G010140 vs. Swiss-Prot
Match: EPF2_ARATH (Protein EPIDERMAL PATTERNING FACTOR 2 OS=Arabidopsis thaliana GN=EPF2 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.7e-10
Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 1


Query: 49  HHRKMAAEEAAMGRKGVETVEVAGSSLPDCSHACASCSPCRLVMISFVCASLQEAETCPM 108
           HH+K  ++   +  +   T    GSSLPDCS+AC +CSPC+ VMISF C+    AE+C +
Sbjct: 51  HHKKEISKNGGVEMEMYPT----GSSLPDCSYACGACSPCKRVMISFECS---VAESCSV 110

Query: 109 AYRCMCNNKSYPLP 123
            YRC C  + Y +P
Sbjct: 111 IYRCTCRGRYYHVP 117

[Close]

BLAST of CmoCh19G010140 vs. Swiss-Prot
Match: EPFL7_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 7 OS=Arabidopsis thaliana GN=EPFL7 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.0e-10
Identity = 26/54 (48.15%), Postives = 39/54 (72.22%), Query Frame = 1


Query: 69  EVAGSSLPDCSHACASCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPLP 123
           + +GSS+PDCS+AC  C PC+LV+IS  C++   +E CP+ Y+C+C  K Y +P
Sbjct: 119 KASGSSIPDCSNACGPCKPCKLVVISSTCSA---SEACPLVYKCLCKGKYYHVP 169

[Close]

BLAST of CmoCh19G010140 vs. TrEMBL
Match: A0A0A0K5P8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G047370 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 9.5e-42
Identity = 95/124 (76.61%), Postives = 99/124 (79.84%), Query Frame = 1


Query: 15  MKGSTWFSIIFIAFLLFPTPISSQRISHQNSRHVHHRKMAA------------EEAAM-- 74
           MK  T FSI+FIAFLLF TPISS+RIS QNSRH HHRK AA            E+AAM  
Sbjct: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSSGKAAMVVVKEKAAMMT 60

Query: 75  --GRKGVETVEVAGSSLPDCSHACASCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 123
             GRKG ETVEVAGSSLPDCSHAC SCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS
Sbjct: 61  RMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120

[Close]

BLAST of CmoCh19G010140 vs. TrEMBL
Match: A0A067JJL6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25818 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.7e-30
Identity = 72/124 (58.06%), Postives = 85/124 (68.55%), Query Frame = 1


Query: 15  MKGSTWFSIIFIAFLLF-PTPISSQRISHQNSRHVHHRKMAA---------------EEA 74
           MKGS + +++ IA LL  P  IS + I  Q +RH HHR   A               E  
Sbjct: 1   MKGSVFVALLVIALLLLLPAVISGRHIGRQRTRHGHHRSAQARTRDGVTVANPNFYREIR 60

Query: 75  AMGRKGVETVEVAGSSLPDCSHACASCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 123
           A  R+G +TVE+AGSSLPDCSHAC SCSPCRLVM+SFVCASL+EAETCPMAY+CMC NKS
Sbjct: 61  ATKRRGPDTVEIAGSSLPDCSHACGSCSPCRLVMVSFVCASLEEAETCPMAYKCMCRNKS 120

[Close]

BLAST of CmoCh19G010140 vs. TrEMBL
Match: M5WYY5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024240mg PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.4e-29
Identity = 67/124 (54.03%), Postives = 86/124 (69.35%), Query Frame = 1


Query: 15  MKGSTWFSIIFIAFLLFPTPISSQRISHQNSRHVHHRKMAA-------EEAAMGRK---- 74
           MKGS W + I +A LLFP  +S++ I+  +SRH  H K +         E A+  +    
Sbjct: 1   MKGSFWVAAIMVALLLFPNSMSARHIARPHSRHGRHLKSSVLIPKSTIREGAVEERRPIS 60

Query: 75  -----GVETVEVAGSSLPDCSHACASCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 123
                G +T++VAGSSLPDCSHAC SCSPCRLVM+SF+CAS+ EAETCPMAY+CMC+NKS
Sbjct: 61  YKRIRGPDTLQVAGSSLPDCSHACGSCSPCRLVMVSFICASIAEAETCPMAYKCMCHNKS 120

[Close]

BLAST of CmoCh19G010140 vs. TrEMBL
Match: A0A103XS70_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_002042 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.2e-28
Identity = 67/113 (59.29%), Postives = 82/113 (72.57%), Query Frame = 1


Query: 15  MKGSTWFSIIFIAFLLFPTPISSQRISHQNSRHVHHRKMA-----AEEAAMGRKGVETVE 74
           MKGS +FS++    LL P  +S++ IS Q+SRH HH   +         A G+  V+TV 
Sbjct: 1   MKGSVFFSVL----LLLPLFVSARHISWQHSRHGHHHHPSEVTTDGHGVAPGKHKVDTVA 60

Query: 75  VAGSSLPDCSHACASCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPLP 123
           VAGS LPDCSHAC SCSPCRLVM+SF+CAS+ EAETCPMAY+CMC NKSYP+P
Sbjct: 61  VAGSRLPDCSHACGSCSPCRLVMVSFICASIAEAETCPMAYKCMCKNKSYPVP 109

[Close]

BLAST of CmoCh19G010140 vs. TrEMBL
Match: V4TJF5_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10017558mg PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 6.0e-28
Identity = 66/125 (52.80%), Postives = 83/125 (66.40%), Query Frame = 1


Query: 17  GSTWFSIIFIAFLLFPTPISSQRIS------HQNSRHVHHRKMAAEEAA----------- 76
           GS   +++FIA +  P  IS++ I       H + +H  H K  + +             
Sbjct: 1   GSALIAVLFIALIFVPALISARHIGLRPHSHHGHHQHAPHSKSLSRDVRAARPKFYWERI 60

Query: 77  --MGRKGVETVEVAGSSLPDCSHACASCSPCRLVMISFVCASLQEAETCPMAYRCMCNNK 123
             M RKG ET+++AGSSLPDCSHAC SCSPCRLVM+SFVCASL+EAETCPMAY+CMCNNK
Sbjct: 61  PIMKRKGAETLQIAGSSLPDCSHACGSCSPCRLVMVSFVCASLEEAETCPMAYKCMCNNK 120

[Close]

BLAST of CmoCh19G010140 vs. TAIR10
Match: AT2G20875.1 (AT2G20875.1 epidermal patterning factor 1)

HSP 1 Score: 113.2 bits (282), Expect = 1.1e-25
Identity = 52/79 (65.82%), Postives = 61/79 (77.22%), Query Frame = 1


Query: 44  NSRHVHHRKMAAEEAAMGRKGVETVEVAGSSLPDCSHACASCSPCRLVMISFVCASLQEA 103
           +S   HH           R+  +TV+VAGS LPDCSHAC SCSPCRLVM+SFVCAS++EA
Sbjct: 26  SSHPSHHHVGMTGALKRQRRRPDTVQVAGSRLPDCSHACGSCSPCRLVMVSFVCASVEEA 85

Query: 104 ETCPMAYRCMCNNKSYPLP 123
           ETCPMAY+CMCNNKSYP+P
Sbjct: 86  ETCPMAYKCMCNNKSYPVP 104

[Close]

BLAST of CmoCh19G010140 vs. TAIR10
Match: AT1G34245.1 (AT1G34245.1 Putative membrane lipoprotein)

HSP 1 Score: 65.5 bits (158), Expect = 2.7e-11
Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 1


Query: 49  HHRKMAAEEAAMGRKGVETVEVAGSSLPDCSHACASCSPCRLVMISFVCASLQEAETCPM 108
           HH+K  ++   +  +   T    GSSLPDCS+AC +CSPC+ VMISF C+    AE+C +
Sbjct: 51  HHKKEISKNGGVEMEMYPT----GSSLPDCSYACGACSPCKRVMISFECS---VAESCSV 110

Query: 109 AYRCMCNNKSYPLP 123
            YRC C  + Y +P
Sbjct: 111 IYRCTCRGRYYHVP 117

[Close]

BLAST of CmoCh19G010140 vs. TAIR10
Match: AT1G71866.1 (AT1G71866.1 LOCATED IN: endomembrane system)

HSP 1 Score: 64.7 bits (156), Expect = 4.5e-11
Identity = 26/54 (48.15%), Postives = 39/54 (72.22%), Query Frame = 1


Query: 69  EVAGSSLPDCSHACASCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPLP 123
           + +GSS+PDCS+AC  C PC+LV+IS  C++   +E CP+ Y+C+C  K Y +P
Sbjct: 119 KASGSSIPDCSNACGPCKPCKLVVISSTCSA---SEACPLVYKCLCKGKYYHVP 169

[Close]

BLAST of CmoCh19G010140 vs. NCBI nr
Match: gi|449438080|ref|XP_004136818.1| (PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis sativus])

HSP 1 Score: 177.6 bits (449), Expect = 1.4e-41
Identity = 95/124 (76.61%), Postives = 99/124 (79.84%), Query Frame = 1


Query: 15  MKGSTWFSIIFIAFLLFPTPISSQRISHQNSRHVHHRKMAA------------EEAAM-- 74
           MK  T FSI+FIAFLLF TPISS+RIS QNSRH HHRK AA            E+AAM  
Sbjct: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSSGKAAMVVVKEKAAMMT 60

Query: 75  --GRKGVETVEVAGSSLPDCSHACASCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 123
             GRKG ETVEVAGSSLPDCSHAC SCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS
Sbjct: 61  RMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120

[Close]

BLAST of CmoCh19G010140 vs. NCBI nr
Match: gi|659110641|ref|XP_008455333.1| (PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo])

HSP 1 Score: 173.3 bits (438), Expect = 2.6e-40
Identity = 91/122 (74.59%), Postives = 93/122 (76.23%), Query Frame = 1


Query: 15  MKGSTWFSIIFIAFLLFPTPISSQRISHQNSRHVHHRKMAAEEA--------------AM 74
           MK  T FSIIFI FLL  TPISS+RIS QNSRH HHRK AA                  M
Sbjct: 1   MKPFTCFSIIFIGFLLSSTPISSRRISQQNSRHGHHRKGAASSGKAAMVVVNEKVTMMTM 60

Query: 75  GRKGVETVEVAGSSLPDCSHACASCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYP 123
           GRKG ETVEVAGSSLPDCSHAC SCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYP
Sbjct: 61  GRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYP 120

[Close]

BLAST of CmoCh19G010140 vs. NCBI nr
Match: gi|802752689|ref|XP_012088317.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 6 [Jatropha curcas])

HSP 1 Score: 142.9 bits (359), Expect = 3.7e-31
Identity = 74/133 (55.64%), Postives = 90/133 (67.67%), Query Frame = 1


Query: 6   LFLNFYSKTMKGSTWFSIIFIAFLLF-PTPISSQRISHQNSRHVHHRKMAA--------- 65
           + L  ++K MKGS + +++ IA LL  P  IS + I  Q +RH HHR   A         
Sbjct: 66  IILQSHNKAMKGSVFVALLVIALLLLLPAVISGRHIGRQRTRHGHHRSAQARTRDGVTVA 125

Query: 66  ------EEAAMGRKGVETVEVAGSSLPDCSHACASCSPCRLVMISFVCASLQEAETCPMA 123
                 E  A  R+G +TVE+AGSSLPDCSHAC SCSPCRLVM+SFVCASL+EAETCPMA
Sbjct: 126 NPNFYREIRATKRRGPDTVEIAGSSLPDCSHACGSCSPCRLVMVSFVCASLEEAETCPMA 185

[Close]

BLAST of CmoCh19G010140 vs. NCBI nr
Match: gi|643709752|gb|KDP24161.1| (hypothetical protein JCGZ_25818 [Jatropha curcas])

HSP 1 Score: 139.0 bits (349), Expect = 5.4e-30
Identity = 72/124 (58.06%), Postives = 85/124 (68.55%), Query Frame = 1


Query: 15  MKGSTWFSIIFIAFLLF-PTPISSQRISHQNSRHVHHRKMAA---------------EEA 74
           MKGS + +++ IA LL  P  IS + I  Q +RH HHR   A               E  
Sbjct: 1   MKGSVFVALLVIALLLLLPAVISGRHIGRQRTRHGHHRSAQARTRDGVTVANPNFYREIR 60

Query: 75  AMGRKGVETVEVAGSSLPDCSHACASCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 123
           A  R+G +TVE+AGSSLPDCSHAC SCSPCRLVM+SFVCASL+EAETCPMAY+CMC NKS
Sbjct: 61  ATKRRGPDTVEIAGSSLPDCSHACGSCSPCRLVMVSFVCASLEEAETCPMAYKCMCRNKS 120

[Close]

BLAST of CmoCh19G010140 vs. NCBI nr
Match: gi|595974907|ref|XP_007217803.1| (hypothetical protein PRUPE_ppa024240mg [Prunus persica])

HSP 1 Score: 135.2 bits (339), Expect = 7.7e-29
Identity = 67/124 (54.03%), Postives = 86/124 (69.35%), Query Frame = 1


Query: 15  MKGSTWFSIIFIAFLLFPTPISSQRISHQNSRHVHHRKMAA-------EEAAMGRK---- 74
           MKGS W + I +A LLFP  +S++ I+  +SRH  H K +         E A+  +    
Sbjct: 1   MKGSFWVAAIMVALLLFPNSMSARHIARPHSRHGRHLKSSVLIPKSTIREGAVEERRPIS 60

Query: 75  -----GVETVEVAGSSLPDCSHACASCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 123
                G +T++VAGSSLPDCSHAC SCSPCRLVM+SF+CAS+ EAETCPMAY+CMC+NKS
Sbjct: 61  YKRIRGPDTLQVAGSSLPDCSHACGSCSPCRLVMVSFICASIAEAETCPMAYKCMCHNKS 120

The following BLAST results are available for this feature:

BLAST of CmoCh19G010140 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EPF1_ARATH	2.0e-24	65.82	Protein EPIDERMAL PATTERNING FACTOR 1 OS=Arabidopsis thaliana GN=EPF1 PE=1 SV=1	[more]
EPF2_ARATH	4.7e-10	44.59	Protein EPIDERMAL PATTERNING FACTOR 2 OS=Arabidopsis thaliana GN=EPF2 PE=1 SV=1	[more]
EPFL7_ARATH	8.0e-10	48.15	EPIDERMAL PATTERNING FACTOR-like protein 7 OS=Arabidopsis thaliana GN=EPFL7 PE=1...	[more]

BLAST of CmoCh19G010140 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5P8_CUCSA	9.5e-42	76.61	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G047370 PE=4 SV=1	[more]
A0A067JJL6_JATCU	3.7e-30	58.06	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25818 PE=4 SV=1	[more]
M5WYY5_PRUPE	5.4e-29	54.03	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024240mg PE=4 SV=1	[more]
A0A103XS70_CYNCS	1.2e-28	59.29	Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_002042 PE=4 ...	[more]
V4TJF5_9ROSI	6.0e-28	52.80	Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10017558mg PE=...	[more]

BLAST of CmoCh19G010140 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20875.1	1.1e-25	65.82	epidermal patterning factor 1	[more]
AT1G34245.1	2.7e-11	44.59	Putative membrane lipoprotein	[more]
AT1G71866.1	4.5e-11	48.15	LOCATED IN: endomembrane system	[more]

BLAST of CmoCh19G010140 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438080\|ref\|XP_004136818.1\|	1.4e-41	76.61	PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis sativus]	[more]
gi\|659110641\|ref\|XP_008455333.1\|	2.6e-40	74.59	PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo]	[more]
gi\|802752689\|ref\|XP_012088317.1\|	3.7e-31	55.64	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 6 [Jatropha curcas]	[more]
gi\|643709752\|gb\|KDP24161.1\|	5.4e-30	58.06	hypothetical protein JCGZ_25818 [Jatropha curcas]	[more]
gi\|595974907\|ref\|XP_007217803.1\|	7.7e-29	54.03	hypothetical protein PRUPE_ppa024240mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development
biological_process	GO:2000122	negative regulation of stomatal complex development
biological_process	GO:0010375	stomatal complex patterning
biological_process	GO:0010374	stomatal complex development
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G010140.1	CmoCh19G010140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33109	FAMILY NOT NAMED	coord: 34..122 score: 8.3
None	No IPR available	PANTHER	PTHR33109:SF12	SUBFAMILY NOT NAMED	coord: 34..122 score: 8.3
None	No IPR available	PFAM	PF17181	EPF	coord: 71..120 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G010140	Cucsa.147790	Cucumber (Gy14) v1	cgycmoB0407
CmoCh19G010140	CmaCh02G001120	Cucurbita maxima (Rimu)	cmacmoB600
CmoCh19G010140	CmaCh11G018700	Cucurbita maxima (Rimu)	cmacmoB142
CmoCh19G010140	Cla013575	Watermelon (97103) v1	cmowmB493
CmoCh19G010140	Cla007743	Watermelon (97103) v1	cmowmB492
CmoCh19G010140	Csa7G047370	Cucumber (Chinese Long) v2	cmocuB518
CmoCh19G010140	ClCG02G017500	Watermelon (Charleston Gray)	cmowcgB457
CmoCh19G010140	ClCG02G001120	Watermelon (Charleston Gray)	cmowcgB459
CmoCh19G010140	CSPI07G04500	Wild cucumber (PI 183967)	cmocpiB524
CmoCh19G010140	Lsi11G015390	Bottle gourd (USVL1VR-Ls)	cmolsiB457
CmoCh19G010140	Lsi10G008800	Bottle gourd (USVL1VR-Ls)	cmolsiB453
CmoCh19G010140	Cp4.1LG15g08020	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G010140	Cp4.1LG04g03040	Cucurbita pepo (Zucchini)	cmocpeB492
CmoCh19G010140	MELO3C028633.2	Melon (DHL92) v3.6.1	cmomedB521
CmoCh19G010140	CsaV3_7G004320	Cucumber (Chinese Long) v3	cmocucB0622
CmoCh19G010140	Cla97C02G027540	Watermelon (97103) v2	cmowmbB512
CmoCh19G010140	Cla97C02G043230	Watermelon (97103) v2	cmowmbB508
CmoCh19G010140	Bhi05G001597	Wax gourd	cmowgoB0643
CmoCh19G010140	CsGy7G004110	Cucumber (Gy14) v2	cgybcmoB927
CmoCh19G010140	Carg19229	Silver-seed gourd	carcmoB1183
CmoCh19G010140	Carg13575	Silver-seed gourd	carcmoB0040

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh19G010140	CmoCh11G019470	Cucurbita moschata (Rifu)	cmocmoB108
CmoCh19G010140	CmoCh02G001120	Cucurbita moschata (Rifu)	cmocmoB389

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G010140	Melon (DHL92) v3.5.1	cmomeB452
CmoCh19G010140	Cucurbita pepo (Zucchini)	cmocpeB500
CmoCh19G010140	Bottle gourd (USVL1VR-Ls)	cmolsiB462
CmoCh19G010140	Melon (DHL92) v3.6.1	cmomedB552
CmoCh19G010140	Silver-seed gourd	carcmoB0981
CmoCh19G010140	Cucumber (Chinese Long) v3	cmocucB0614
CmoCh19G010140	Watermelon (97103) v2	cmowmbB501
CmoCh19G010140	Wax gourd	cmowgoB0664
CmoCh19G010140	Cucurbita moschata (Rifu)	cmocmoB400
CmoCh19G010140	Cucurbita maxima (Rimu)	cmacmoB508