Cla013575 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAATCCACAAAGGCTTTACTACTTCTGGTCGCTGCTGTACTCCTGATCCTCCTAGTCGCACCAGCCATGCCCGCCAGACAACTCTCAACTCGTACCTATCTTTTCTTTTTCCAAACATTATTATTATAAAGACAACATTTAAATTGCATTTTTAAACAAACCCATATCACAAAATTGATTCTATTTTTATTATGCAGATAACAATAATAGTCGCAAGCGAATGAGAGGAGAGACGGTGGAAATTGCAGGATCGAGGTTACCAGATTGTTCTCACGCTTGTGGGTCGTGCTCCCCATGCAGGCTCGTGATGGTTAGGTTCTTTTGTGCTTCGGTTGAAGACTCAGAGGCTTGCCCCTTGGCTTACAAGTGCATGTGCAGCCATAAATCCTTTCCTGTTCCATGA ATGAAATCCACAAAGGCTTTACTACTTCTGGTCGCTGCTGTACTCCTGATCCTCCTAGTCGCACCAGCCATGCCCGCCAGACAACTCTCAACTCATAACAATAATAGTCGCAAGCGAATGAGAGGAGAGACGGTGGAAATTGCAGGATCGAGGTTACCAGATTGTTCTCACGCTTGTGGGTCGTGCTCCCCATGCAGGCTCGTGATGGTTAGGTTCTTTTGTGCTTCGGTTGAAGACTCAGAGGCTTGCCCCTTGGCTTACAAGTGCATGTGCAGCCATAAATCCTTTCCTGTTCCATGA ATGAAATCCACAAAGGCTTTACTACTTCTGGTCGCTGCTGTACTCCTGATCCTCCTAGTCGCACCAGCCATGCCCGCCAGACAACTCTCAACTCATAACAATAATAGTCGCAAGCGAATGAGAGGAGAGACGGTGGAAATTGCAGGATCGAGGTTACCAGATTGTTCTCACGCTTGTGGGTCGTGCTCCCCATGCAGGCTCGTGATGGTTAGGTTCTTTTGTGCTTCGGTTGAAGACTCAGAGGCTTGCCCCTTGGCTTACAAGTGCATGTGCAGCCATAAATCCTTTCCTGTTCCATGA MKSTKALLLLVAAVLLILLVAPAMPARQLSTHNNNSRKRMRGETVEIAGSRLPDCSHACGSCSPCRLVMVRFFCASVEDSEACPLAYKCMCSHKSFPVP
BLAST of Cla013575 vs. Swiss-Prot
Match: EPF1_ARATH (Protein EPIDERMAL PATTERNING FACTOR 1 OS=Arabidopsis thaliana GN=EPF1 PE=1 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 1.4e-25 Identity = 57/103 (55.34%), Postives = 72/103 (69.90%), Query Frame = 1
BLAST of Cla013575 vs. Swiss-Prot
Match: EPFL7_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 7 OS=Arabidopsis thaliana GN=EPFL7 PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 4.5e-11 Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 1
BLAST of Cla013575 vs. Swiss-Prot
Match: EPF2_ARATH (Protein EPIDERMAL PATTERNING FACTOR 2 OS=Arabidopsis thaliana GN=EPF2 PE=1 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 3.8e-10 Identity = 30/74 (40.54%), Postives = 43/74 (58.11%), Query Frame = 1
BLAST of Cla013575 vs. TrEMBL
Match: A0A078FNB7_BRANA (BnaA09g43550D protein OS=Brassica napus GN=BnaA09g43550D PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.1e-24 Identity = 54/102 (52.94%), Postives = 74/102 (72.55%), Query Frame = 1
BLAST of Cla013575 vs. TrEMBL
Match: M4EQS2_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.1e-24 Identity = 54/102 (52.94%), Postives = 74/102 (72.55%), Query Frame = 1
BLAST of Cla013575 vs. TrEMBL
Match: A0A078CXT8_BRANA (BnaC08g36150D protein OS=Brassica napus GN=BnaC08g36150D PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 2.7e-23 Identity = 53/107 (49.53%), Postives = 74/107 (69.16%), Query Frame = 1
BLAST of Cla013575 vs. TrEMBL
Match: A0A0D3DWB3_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea GN=EPF1 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 2.7e-23 Identity = 53/107 (49.53%), Postives = 74/107 (69.16%), Query Frame = 1
BLAST of Cla013575 vs. TrEMBL
Match: V4M2U3_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10002128mg PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 4.7e-23 Identity = 54/108 (50.00%), Postives = 73/108 (67.59%), Query Frame = 1
BLAST of Cla013575 vs. NCBI nr
Match: gi|685366897|ref|XP_009117463.1| (PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Brassica rapa]) HSP 1 Score: 120.6 bits (301), Expect = 1.6e-24 Identity = 54/102 (52.94%), Postives = 74/102 (72.55%), Query Frame = 1
BLAST of Cla013575 vs. NCBI nr
Match: gi|729405510|ref|XP_010555134.1| (PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Tarenaya hassleriana]) HSP 1 Score: 117.9 bits (294), Expect = 1.0e-23 Identity = 60/110 (54.55%), Postives = 77/110 (70.00%), Query Frame = 1
BLAST of Cla013575 vs. NCBI nr
Match: gi|15226414|ref|NP_179684.1| (protein EPIDERMAL PATTERNING FACTOR 1 [Arabidopsis thaliana]) HSP 1 Score: 116.7 bits (291), Expect = 2.3e-23 Identity = 57/103 (55.34%), Postives = 74/103 (71.84%), Query Frame = 1
BLAST of Cla013575 vs. NCBI nr
Match: gi|922550735|ref|XP_013603349.1| (PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 isoform X1 [Brassica oleracea var. oleracea]) HSP 1 Score: 115.9 bits (289), Expect = 3.9e-23 Identity = 53/107 (49.53%), Postives = 74/107 (69.16%), Query Frame = 1
BLAST of Cla013575 vs. NCBI nr
Match: gi|923877172|ref|XP_013711492.1| (PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1-like [Brassica napus]) HSP 1 Score: 115.9 bits (289), Expect = 3.9e-23 Identity = 53/107 (49.53%), Postives = 74/107 (69.16%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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