CmoCh19G005800 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh19G005800
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPentatricopeptide repeat-containing protein
LocationCmo_Chr19 : 6571314 .. 6583578 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTAATGGCAAATCTTATGCTATGCGCTCTTCGTGTATAAATCTTGAGTTCATCAATCTCTCCGACCTCCTCCAAGGCCGGATTAACAGTTCCCGCCTCCGTCAAATTCACGGCCGCGTCTTTCGTCTGCTGAAGCATCAGGACAATCTAATCGCAACTCGACTTATCGGCCACTACCCATATTCTGTTGGAATCAGAGTCTTCAATCAACTCCTACGGCCGAACATATTTCCTTGCAACGCGATTATCAGAGTACTTGCTGAATCGAATTGTTCGTTTCTTGCCTTTTCCATCTTCAAATCTTTGAAGCGGCTTTCACTTTCCCCTAATGATTTCACTTTTTCTTTCCTTCTCAAGGCGTTTCACCGTTCCAGCCATTCTCCTAATGTGAAACAAGTTCATACTCATGTCATGAAAATGGGTTATTTGGGTGATTCTTTTATCTCCAATGCTCTTCTTGGAGTCTACGCGAGAGGTTTGAAGGATATGGGTTCTGCACATAACATGTTCGACGAAATGTCTGAGAGAGAAATGGCTTGTTGTTGGACTTCTTTGATTGCTGGCTATGCTCATATGGGTCTTGCTGAAAAGGCTCTGCTGCTTTTTGTGATGATGATCAAAGAGAATATCCAGCCCGAGGATGACACCATGGTTAGTGTTCTATCTGCTTGTTCTAAGCTTCAAATTGCTGAAATTGAAAAATGGGTTGCAGAATTAACACAATTGGTTAATGAATTTGATTCCTGTTGTGATTCAATCAATATTGTTCTTGTTTATCTATATGGGAAGTGGGGGAAGATTGAAAAGAGTGAAGAAAAGTTCAATGAAATTGTTGATAAGAGAAGTGCTATTGTCTGGAATTCAATGATAAATGCATATTTTCAAAACGGTTGCCCTGTGGAGGCCTTGACCCTTTTCCGTCTAATGCTTGAGAATCCCCATTGCAAACCCAACCATGTCACAATGGTTACCGTCCTTTCGGCTTGCGCTCAAATTGGAGATTTGCAGCTCGGTCGTCGGGTTCATGAAGCTCTCGAACACGGCGGGCGCAGAGGTATCATTGCATCAAACAAAATGTTGGCCACTGCATTGATTGATATGTATTGTAAAAGTGGGAGTTTGGAGAAGGCAAAACAAGTTTTTCATGAACTAATCTGCAAAGATGTAATCTCCTTCAATGCCATGATCATGGGCCTTGCAGTAAACGGCAAAGCCGATGAGGCATTGAAGCTTTTCTCCCAAATGCAAGAGTCTGATATAAAACCAACCACTGGAACATTCATTGGCTTACTATCTGCTTGTAGCCATTCGGGGTTTCTCGAACAAGGACGTCAAATTTTCATTCAAATGGCTACCCGCTACTCAACGTCGCCTAGTCTAGACCACTATGCTTGTTACATTGATCTCCTTGCTCGAGCGGGCTGCGTCGAGGACGCTCTTGAAGTTGTTTCAACCATGCCTTTTGAACCTAATAACTTTGTTTGGAGTTCTCTGCTGAGAGGCTGCCTGCTTCATTCGAGATTCGAGTTGGCACGATATGTTTCGAAAAAGCTTGTTGAAGTAGATCCCGAAAGCTCTGCTGGGTATGTAATGCAGGCGAATTCATTTGCCACTGATCTTCAATGGGATGATGTCTCGGCTTTGAGATGGTTTATGAGAGAAAAGGGTGTTCATAAGCAGCCAGGGCGGAGTTGGATCAGTATAGATGGGACTGTGCATGAATTCTTCTCGGCAACCAAATCACATCCTTGTGTGGATCTGTTATACAGTACGTTGAGTGAGCTTGAAAGGCAAATGAAGCTGGTAATCCCATAGAAGAAACCTCACAAGGTATTGAATGCGTTTATTTAGCAATCATTTTACCCCTACTTATATTTGTAGAGATTGGTTCTCCACGAAATTTTTTTCCCATATGTATATGGGAATTTTGTGGGCTCTAAGAGCGGACATGGGATGAGGAATATAATCTTTGTTCCTATCCCCGTTTAACTAATAGGGAGAAAATATCTTCACTCCTTCCATCATTCTCCATTTAAACGGGGATTCATCATCCTATAATTATTGATAAGCATTGATCAGGTCTAACGGGATAGTATCTCATATCTGATACTCTCTCCACAAATCTCGAGCTTCAAAAATTTATTTTCTAGTCCTCAATGTCATCTTCAAAACTCCTAGATTTGTGACAATGTCATCTTCAAAACTCCTAGATTTGTGATTTTCATTTTGATCCAAATTTCTCAAACTAAATAACACGAGAACAGAACTCTGTGCATGCATCTATAGTATGAGAACAGAACTCTGTGCATGCATCTATAATATTGCTGGACAAATCGGACATAACATAGACATTTTGTGTCACATGTCACAAAATATGTATAATAGTACCAAATAAAAGGGAAATGAGTACCAAACAAAAAACCAAAACTATAAAATTGTTTACAATGAAACAAAGATTTTAAAGTTTTTTTGGAACAAAATGGCCATACAAGATTTGAAGGTATAAATCCATTTAAAAGAACGTAAATTTATTATGAACACGGATATAACTTTAAAGAATGTATTTGGACTGCAAATTGACAGGGGCCGCGCGAACGCAGGCCCCCACTACCACAAATAACGACGTAGGTTCCGCCACTTTGGGCAGACCTTAGACGGGCACCCCTTCCACAGTGCAATGGAGGTCACCAATCTAGGCCATGAGCCTTCATGATCGCCCATTGACCCCGTCCAGGTAAGTATGTTACAACGTACCTCTCCCATCATATTTATAGGCCCCGCATACAGCCACCTCCTCACACTTTCTCGATGTGGGACAAATACAACCAAATTTAGCTGCTCTCCTTCCCCTCTTGGCAAGGAAAAACGTCCTATTCTCAATTCTTCACCCAAATTTTTTACCTCAATTCTTTAACCATTAACATTGGGTTAAATAGTCAAAATTTACGAGAATATGATCGTAAAAACTAGTTCTACCATTCAAATTTTCTAATATTATCTAAACCGAGACACTTCTAAAACACTTTTCAACATAACATTTCAGATACACGCATTGAATTATTCAAACTCATAACTTTAAAACGTTCTGACATTTTTAAACTAAGTCAAAAGAACAGAACCGAAGCAAATGGGTATTTATATATATGGAGATCAAAAGTCCCAAACAAGAAATGGGCTAATAATAATAATAATCAAAATGAAATGAAATAAGGAACAGGCAAAATGAAGAATAATGAAAACCCAACATAGACAGCATAGAAAAAAGGAAGAAATCTAAGCCATCATCAATACATATCCCATTCCAATCAACATGCTCCCCACCATTGTCTCCTTTCTCCAACTTTTCTCCACTCCACTCTGCAAATAATAATAATAATGTCCATCAACCCGACATGTCGTGTTAGCATTTTCGTGAATGTGTTCGATGATAATGATTAACCAAAAACGTAATGTGAAATGCAAGAAGATCTAGAAGTTTTCGTTCATGCTCGTGTTATAAAAGTTTACGGGTTTTAAAGGGTGTGTAATAAATTTCTAAACTTTTAATTTCGTGTGTATTAATTAGCTTTCGAGTAGATTTCTAAATGATTTTAAAATAAATTTTATATGTAATAGGACCGTAAAATTTTAATTTACACGAGATCTAAGATCGAAGGTCTTAACTCTTGATTTTGTGTATGATAATTTTAAATTTTAAAAAAAATGTAAAAATTGAGTTACATTTTTTTTATGAATGTAAAAAAAATTATTTGAAAAGGTAGAATTATTAGTTTAATAACATCAAAATTTAAACTTTAAAATTTTAGTAGAAGATTAATGTATGATCAATCGAAGTATATAATGAAGCTTACATTGTCGTTCTGAGATGGGGTAGGAGATTCTGGGCCCGCGGGTCCTGGACCCTCCGCCGACGGCATCGGCGGGCTCGAAACTGGGGCCGGACCCGGAGCCGCCTTCAACTTCTTCTTACTGGGTGCAGGAGCCGGAACCGCCGCTGGTGGTGATGCCAGTGGTGCAGGAGGTGGAGTGGCTGGTGGTGGGGTTGCAGGTGGTGGGGTTGCCGGTGGTGGGGATGCTGGAGGAGGAGTGGCCGGCGGTGGGGATGCCGGAGGAGGAGTGGCTGGTGGTGGGGAAGCTGGAGGTGGGGAAGCTGGAGGAGGGGTGGCCGGTGGTGGGGATGCCGGAGGAGGAGTGGCTGGAGGTGGGGAAGCCGGAGGGGGAGTGGCAGGAGGAGTGGCAGGTGGGGGAGCTGATACTGGAGGAGGAGTGGCGGGAGGAGGGGCGGTGGTGGTGGTGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGGTGGGGGGACTGGAGGGGGGCTGAGCTCCGGCAACGGCGAAGGCAACGAAGATCAAAGTGAAGCAAAACAATGCTTGAGGATCCATAATTGTGGCTTGGCTTCTGAAATCAAAAGAGAGGAAGAGAATAAATAGAAGAATTAGGAAACGGAGGACATTTTAGGTAATTTCACATCCAATAAGCATAACGAATGAAGAATTTTCAAATTTGATGAGGCGCATGTGGCCAACCGCCACCCGCCACCCGCCACCAAACATATCTCACGTATCCCACTGTCGGTGGGCCCAACCGACAATCAAACATTGTATCAACATAGAATCTACGACTGCCACGTGTTCCATAACGGGACCCGTTACATTCAATCTAAAATGACGTGTCAAATCAAGAATAAAACAGCAGTAAAATCTGTATCAACTCAATCCAAGTCATATAATTATATATACGTATGTTTATTTATTTATTACTTATCTCCCCCCAATTAGATATATATTGAAATTAATTAAAAAAATGAATAAATGGCGGAATCAACCTAACTGTGTTGGATTAAATTTGAGTTTATTATTTAATAAAAGCTAATTTAAATTTTAAAAAAATTATAATTCGAATAATTTTTGACCCAATTCAATCCAGGAACACTATTGACGTGTATTATTGTCCCCTCTTTTTTTTTAAATTAATTAAAAAAGCATTTATATAATATCAATTATGAATGGGGCCTTCCACGTGATGATGAATGATTAAACCCATTGATGTTTAAGTTAAATTATTGCAATCACCAAACTCTCCGTTCACTTTTTTCTTTCCTTTTAAATCACATTCTTTCAATAAATAAATAAATAAATAATATATGAATGCAAGTATATTATTGGAGTTAATTAACCAATCTATAAGTGTGTAACAATTTTATGAATAATCATATATGGTTTATATTTGTCATGTTAGCAGCTTTAATTATTTGTTTAGACCTTTCATTAGAATGTGTGACTTGCTCGGTACGAATGTTAGTCTAAAAAATGTGTAGATTGAACTAACATAATTAATGTGTTTTTTAATCTCGATCTTGACTAATCAAGTAGTTGCTTTGATTTAAAAATATCTATAATAAATTATTTATAAATACTAAAATTACTCTATATCATCGGCCTGATGTTAACTAATAAAATGACTTCGAATATTAATATATCTATACATATATATCATTTTAATAAAATAATAAATTATTGAAATTCAAGACTTATAATATTAAAATTGGAAAATATTCAAACAATTAAGGTATTTTTGAAAAAATTAAGGATGTTTTTGAAAATTTGATAAGTTTAAGATATTTTTAAACATTTTTTTATATAAATTTAAGGTTTTTTATTTTTTATTTTATTTTTTTAATTTAAGGATATTATTGGGGGATAATTAAAAAAAAAAACAATTTAAGGGTTTTTTTTAATAAATAATTCAGTCTTAACCAAATTAATAAATTTACAACTAACAAATGGTGAGAAAATTTGGGAGATAATTGGGTAGCAGTTGGACAACTAAACATAACCAACCTGGTACGAGGTTTAATAATGTGAAAATAATAATCATATTATTAAACAAAACAATTCTCAAAATTCTTTACATTAATTTTTATTTTTTTAAATTAAAATGATAGGTCAAATAAATAATCTCAACCGTTTATAATTTTATAATTTAGTGATAATTAATATATATTTAAAATTAAAAGAAATAAAATTACAAATTTTGGAATAATTTATTTAAAAGAAACTTTACTTTTAATACAATTCCAATTATTAAAATAAATAGCCAATACAAACATTTTGAAGCATATTTGAATGTTACTCAAAGTAGGACGGAGTGTTTGGTGAGTCCTAAATACGTGTCGAGCTCTAATTGGCTGGACGTCGGTGACGGTGACGGTGACGTGTGACAGACATTGAAAAAGTCAAAAGTGTATTATTAAGGCTTGTGTACGGTAATGATTTGGGTGAAATTAAACTTTAAATTAACGTGGGACCCACGTGTCAATTTTTTTTTTAAGTTGTAAAAATGATTAATTAAAAAAAAAAATTAAGGTAAAAGTAAGATTTGATTCTTTAATTAAACAGATTAATAAAAATATTTTTTTATAAACTTTTAAATTTTTAAAAATGTTTTATTGAGGCGTTTACGTCCTCAATAATAGATATCGTACATAAAAAAAATATTATAAAGTAATAAAAATTATAACGATATAATTTTTATACAATAAGGTTACAATTTTGATTAAAATCATTATTTACATCAGAATCATATATTATCAAACAAGAATATGTGAAAAAGAGGTGGACATTATTATGATTATATATTATATTTGAAGGAAAAGGGATGACAACTTAGAGTGAAAGCAATGGTAAATCCGTTTCAGTTGAGCTGTCTAATCAACACAACTTTATAGCCATGCAACATGTTTTTTTTTTAATATTTAAATATTATCATTCGTGGCTCAAATAAACTATGTATGAAGCTTTTAATTTAGAGGTCTAGTCGGTAAATAAAAAATTGTAAAATATGTACCGACATATTAGACATAAATTGAAAATTTATGTATCATAATTTTAAATTTTTCTTAGTTGGTAAATTAATGAAATAAATATCAAACAAGTTCACATAATCAATAAATAATTAGATATAAAATAAAAAGATGTACGACAATTTTTTTAAAAAAGAAATTCTTGCAATTTTGCAGTAACCTAAAATTCAAATCTACAGGTAATAAATAATTAATGATTTGAGTATTTAGAATTTATATAAGCTTAAAAAATAATTTTTATTGCATTTGGAACTGATGGGCTCAAACCTATAACTTCCGAACGAGTCAGGACTCTAACCAATTGAAGTATGATCCTACGAAATAAAGTGTACATCAGTATTTAGAGTTAATTACAAAATGTTAATATCAGTATTTTTTTTAACAACAAAATATAATAATTCAATACTCACAATATCATATTATTTGGAATACTTTAATTAAACATTTATTAAAATTTTATCATTTAAAAAAAAATACGTTGTATTTAAACGTATTGAAATATAAAAATATAATTTTCACAAATTCCGCTACATTAAAATAATTTAAAAAAGACACCAAAAAATTAAAAAAAATATAAATCATAAATTTAGAAATTTAGAAATTTATTTATAAAATTGAAGAATCTAATAAATACAAAATCAATAATTTTAAAATTTATTATATATATATATATATATATTCATTCGTGAATTTTAATTTTAATAGATAATAAATCAAAATCAAATTAAATGGTTATTCAACTAAGTAAATTTTATTTAATTTTATTTATAAATTATTATTTTAATATTTAAAAAATATATGATATGGTGCTATCTTTATCTAAATGATAGAGACGATGAGCGGAGATTGTGAGGTTAAGATTTGAAATTCATGAAAATGGCGGCATTTCTCCCTCCTTTTCCTCTCTATTTCATTACTCAGTTCTTGTTCTCAGATTCTCCTCCCCACCTCCGTTTGCCTTCTCCGACTAACTCTACAACTTTTTCTCGTCGTTTCTCCGCCTCTCGTAATCGGATTCTTTCCGTCTCCCATGGACCCGCCGGAGTGCCAGAAGCCTTCCGTCCGAACGTCGAAGAAGCGCAACTCGGAGGAAGACTTGCAACTGGCCACTGCCAACAAGAGAGCCGTGCTTGACGAGATCACCAACTCGTTGATCTTCAGTTCGAATCAGTGCTCTCTTTCTGATCAGGAGATGACGGATAAGCATCTGGACGAGGAGAAACTTCCTGAAGGAAGGTCTGTTGATTGTTCTAAGAAGTCTGGCTCTGCTTCTAGCATTTATAACCAACTCCGATTAATGGAGGTATGGATTTCGGCTTCTGTGTCTTGATTTTTTTTTTTTTTTTCAAATATCGAGATGTTAAATGAACCGAGGACTGCGACACCTTTACTTTGTCTTGGTTTGGCAAGTTCTCTGTGTAGTGAAGTGCTTATATGAACTGAGCATTGCGATATGTTTTAGGGCTTGATTTTAGATATGGATTTAGTTAGGTCTCTGAGATCGAGATATTGCGTGTAGTGAAGCGATTATATGAACTGAGAATTGCGATATCTTAATTTCTTCGTCCAGTTTAATCGTTGCTTCATCATCTTGTTCGTTTACGAATATATTAATTCTAGAGAATCCGAGATTCCTCTCTACCGATAGTTGTCTAATTTTTGCGATTACATGAACTGAGGATTCTTCGCTATCGATATTTGATCCAACTAGTTATTTCCTTGCGTGAATCAGATGGAATTACACATGAAGGTACTGCCAAACATTGGAAAGGCTCACAACGGTCACTCCAGTGTAACGTTCCCTCGTTTCCGAGAAATTCTAGTCGATTGGTTAATAGACGTTGCTGAGGAATACAAGCTTGTATCAGACACCCTATATCTCACTGTATCACACATTGACAGATACTTATCCTGGCATGCTGTTGACAGAAACAAGCTACAACTTCTTGGTGTTTGTTGCATGCTAATTGCATCGTATTTACCACGAACCCACTAGTTTTATTTGGTAATGTTTATGGTATTAGTTACAAATCTCACTGCTATTTTGATTGGTGCTGTAGGAAGTATGAAGAGATCAATCCTCCTCACGTTGAAGACTTCTGCTATATAACTGATAATGCGTATACCATTGAACAGGTGCTGCACTTTGTCCTTTCTATGCTTAAGTTGCGCTTTCTCTGCTTAAGTTGCGCTTCTCTTCTAATATTTGGCGCTATAAACATTTTGTTGAAGATTGTTAGGAGAGGAATCCCATATCAGTTAATTAATAGGTTGATCATGAGTTTATAAATAAGGAATGCATCTCCAATAGTATGAGACATTTTGAGAAAACCAAAAGCAAAACTATGAGGACTTATACTCAAAGTGGACAATATCATACCATTGTGGTCAGAGTCATTCTCTTAACTTAGTCATGTCAATAGAATCCTCAAATGTCGTACAAAAAAGTTGTGAGTCTCAAAGGTATAGTCAAAAGTGATTTAAGTGTCGAAGAAAGAGTGTACTTTGTTCGAAGACTCCAGAGAAGGAGTCGAGCATAATTCGAGCCTTGATTAAGGGAGGTTCTATAGTGTACTTTCTTCGAGAGGAGGACTATTGAGAATGGTCAGGAGAGGAGTCCCAAATCGTGAGGTTGAAGGGCTTGCATTCTCGTTTCCCAGGCAAAAATTACAACAAAAAGGAAGAAACTGTCCATATGACATGTCTACTTCCATAAATCTTTATCTATATTAAAAGCCAAATCAATATCCACTATACCTTATAGTATAAACATTGATGATACACGTTATAAAATCTCAATGAAAATAGATATGGTTTATGAGTTATAAGTATCGTTGTGATAGTATTTGTGTTCATATTTTTTTGTTATATCATAACTGTGTTTCAAAAACTATTTAATATTAATATTTTGTCAAGATTTTTATACCCCTTTTGAGCTGATGTAACAAGACTTGGCTGTAAATTTTGGTTCTTATGCATTTAGATACAAGCTCCCATTCTTTCCCTCTTGATGATATGATTATGGTTCTTATCTGGTTTTGTTTAATATGCAGGCATTGAATATGGAGAGAGATGTACGCAAATTCTTGACCTTTGAAGGTGCCCCCACGACAAAAAATTTTCTCAGGCAAGAATGTTTTTCAACTATTTCATTTCATACAAATCTATAATTCTAATTCTCCCAATACGCGATTAACACATTGTTGCCACATTGTAGAATATTTACACAAGTTTCCTTGGAAAATTGGAATGTAAGCCCCATCCATGACAACTTCCCAATTTTATGCCTCCCCTTTTGTTCTTGATTCTAAATAGTTAACGCTACCAGCAGGCTCCAGACTTGGAATTTGAGTTCTTGAGTAGTTATCTTGCGGAGCTAAGTTTGTTAGACCACCGTTTTGTTCAATTCTTACCTTCAAAGATCGCTGCATCAGCCATTTTTCTTTCGAGAATGACAATCAAACCACAGAACCATCCTTGGGTAAGTAAGTTATTATGTTCGTAGCACTTTTTTTAAAACCAAATTATGGTTTAGTTTCATAATGTTCTTGCTAGCTTCATTATAATACTATTGGGTTTTCACATTTTGCAGTGTTTAGCACTACAACATTGCTCCGGTTACAGGCCATCTCAATTGAAGGAATGCATTCTTGCCATTCATGACTTGCAATTAAATAGAAAAAAAAGCTCTTTACTAGCTTTAAGAGACAAGTACAAGCAGCATAAGGTACTGTGTGCGTACATATTTCATTAGTTATTTTCCTTCCAAACTTAAGAATCGTGATGTATATATTCTAGAAAGAATTTAAGGTATTGCAATCTAACGCTAGTAGATATTGTCCTTTTTGGGCTTTTCCTTTCGGACTTCCCCTCAAGATTTTTAAAACTCGTCTATTAGGGAGAGGTTTCTACCCCTTATAAATGGTATTTCGTTCTCCTCACCAACCGATGTAGGATCTCACATGTGTAAGGAGGGAGTTCCACACTGGCTAATTAAGGAAATGATTATAAGTTTATAAATAAGAAATACATTGTTGGAAGTGAGTCACACGTGTTCCCTAATCTAGGGAATGATCATGGGTTTATAAGTAAAGGAATACATCTCTATTGATACGAGGCCTTTTGGGGAAGTCCAAAGCAAAGCCATGAGAGCTTATGCTTAAAGTAGACAATATCATACCATTGTGGAGATCCGTGATTTCTAACATACATTTCCATTAGTACGAAGCCTTTTGGAGAAACCAAAAGTAAAGTCATTAGAGCTTATACTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTAGTTCGTGTATGTGTACATATTTCATTAGTTATTTTCTAAGACTTTCAAACCACAACCTATAATCTAGAAAGAAGAATCCAAATCTCTTTCTAGTTTACATAAATTAATATTCAATCTCTTGAAGGGAAAAATGTTTTATTTAATGACAAATCTTTTTATTTTGCAGTTCATGTGTGTGGCAGAGCTATCGTCTCCCCCAGAAATTCCTGCACATTATTTCGAGGACATTGATCAGCAATCATTCAACAGGTTCTTAAGAACATAACTGGTCGATGCCTCGATGCTTAAACTCTTTCTCTTCCATTGGCTAGCATGACATGCACAGTTAACCATGCACAAATAATGAGAAGTAGGTACTTATTAGATAGAAGATACCCATTCTTACTTGTTAGATAGGCTATTGAATCATAATCATGGGTTGATTTAGCATAGGCCCAGCTTTAGAACATTTTTTTATTAGTAATCAGGTTTAGGCATAAACATCGGCATTTTTAGCTTAGTGGTGCCGACGGCCGCCCTTGTAGGACTTAGTTTGAGGCTTCAGGGAGGCGTTTTTAAGTTTTTAAGTTTTTTTTTTTTTTTTTTTGTTACTATACAGCAGGCAAGTAAATTATTGGTTCGACCCTTCCATGTGAG

mRNA sequence

ATGGTTAATGGCAAATCTTATGCTATGCGCTCTTCGTGTATAAATCTTGAGTTCATCAATCTCTCCGACCTCCTCCAAGGCCGGATTAACAGTTCCCGCCTCCGTCAAATTCACGGCCGCGTCTTTCGTCTGCTGAAGCATCAGGACAATCTAATCGCAACTCGACTTATCGGCCACTACCCATATTCTGTTGGAATCAGAGTCTTCAATCAACTCCTACGGCCGAACATATTTCCTTGCAACGCGATTATCAGAGTACTTGCTGAATCGAATTGTTCGTTTCTTGCCTTTTCCATCTTCAAATCTTTGAAGCGGCTTTCACTTTCCCCTAATGATTTCACTTTTTCTTTCCTTCTCAAGGCGTTTCACCGTTCCAGCCATTCTCCTAATGTGAAACAAGTTCATACTCATGTCATGAAAATGGGTTATTTGGGTGATTCTTTTATCTCCAATGCTCTTCTTGGAGTCTACGCGAGAGGTTTGAAGGATATGGGTTCTGCACATAACATGTTCGACGAAATGTCTGAGAGAGAAATGGCTTGTTGTTGGACTTCTTTGATTGCTGGCTATGCTCATATGGGTCTTGCTGAAAAGGCTCTGCTGCTTTTTGTGATGATGATCAAAGAGAATATCCAGCCCGAGGATGACACCATGGTTAGTGTTCTATCTGCTTGTTCTAAGCTTCAAATTGCTGAAATTGAAAAATGGGTTGCAGAATTAACACAATTGGTTAATGAATTTGATTCCTGTTGTGATTCAATCAATATTGTTCTTGTTTATCTATATGGGAAGTGGGGGAAGATTGAAAAGAGTGAAGAAAAGTTCAATGAAATTGTTGATAAGAGAAGTGCTATTGTCTGGAATTCAATGATAAATGCATATTTTCAAAACGGTTGCCCTGTGGAGGCCTTGACCCTTTTCCGTCTAATGCTTGAGAATCCCCATTGCAAACCCAACCATGTCACAATGGTTACCGTCCTTTCGGCTTGCGCTCAAATTGGAGATTTGCAGCTCGGTCGTCGGGTTCATGAAGCTCTCGAACACGGCGGGCGCAGAGGTATCATTGCATCAAACAAAATGTTGGCCACTGCATTGATTGATATGTATTGTAAAAGTGGGAGTTTGGAGAAGGCAAAACAAGTTTTTCATGAACTAATCTGCAAAGATGTAATCTCCTTCAATGCCATGATCATGGGCCTTGCAGTAAACGGCAAAGCCGATGAGGCATTGAAGCTTTTCTCCCAAATGCAAGAGTCTGATATAAAACCAACCACTGGAACATTCATTGGCTTACTATCTGCTTGTAGCCATTCGGGGTTTCTCGAACAAGGACGTCAAATTTTCATTCAAATGGCTACCCGCTACTCAACGTCGCCTAGTCTAGACCACTATGCTTGTTACATTGATCTCCTTGCTCGAGCGGGCTGCGTCGAGGACGCTCTTGAAGTTGTTTCAACCATGCCTTTTGAACCTAATAACTTTGTTTGGAGTTCTCTGCTGAGAGGCTGCCTGCTTCATTCGAGATTCGAGTTGGCACGATATGTTTCGAAAAAGCTTGTTGAAGTAGATCCCGAAAGCTCTGCTGGGTATGTAATGCAGGCGAATTCATTTGCCACTGATCTTCAATGGGATGATGTCTCGGCTTTGAGATGGTTTATGAGAGAAAAGGGTGTTCATAAGCAGCCAGGGCGGAGTTGGATCAGTATAGATGGGACTGTGCATGAATTCTTCTCGGCAACCAAATCACATCCTTGTGTGGATCTGTTATACAGAGATTCTGGGCCCGCGGGTCCTGGACCCTCCGCCGACGGCATCGGCGGGCTCGAAACTGGGGCCGGACCCGGAGCCGCCTTCAACTTCTTCTTACTGGGTGCAGGAGCCGGAACCGCCGCTGGTGGTGATGCCAGTGGTGCAGGAGGTGGAGTGGCTGGTGGTGGGGTTGCAGGTGGTGGGGTTGCCGGTGGTGGGGATGCTGGAGGAGGAGTGGCCGGCGGTGGGGATGCCGGAGGAGGAGTGGCTGGTGGTGGGGAAGCTGGAGGTGGGGAAGCTGGAGGAGGGGTGGCCGGTGGTGGGGATGCCGGAGGAGGAGTGGCTGGAGGTGGGGAAGCCGGAGGGGGAGTGGCAGGAGGAGTGGCAGGTGGGGGAGCTGATACTGGAGGAGGAGTGGCGGGAGGAGGGGCGGTGGTGATTCTCCTCCCCACCTCCGTTTGCCTTCTCCGACTAACTCTACAACTTTTTCTCGTCGTTTCTCCGCCTCTCGTAATCGGATTCTTTCCGTCTCCCATGGACCCGCCGGAGTGCCAGAAGCCTTCCGTCCGAACGTCGAAGAAGCGCAACTCGGAGGAAGACTTGCAACTGGCCACTGCCAACAAGAGAGCCGTGCTTGACGAGATCACCAACTCGTTGATCTTCAGTTCGAATCAGTGCTCTCTTTCTGATCAGGAGATGACGGATAAGCATCTGGACGAGGAGAAACTTCCTGAAGGAAGGTCTGTTGATTGTTCTAAGAAGTCTGGCTCTGCTTCTAGCATTTATAACCAACTCCGATTAATGGAGATGGAATTACACATGAAGGTACTGCCAAACATTGGAAAGGCTCACAACGGTCACTCCAGTGTAACGTTCCCTCGTTTCCGAGAAATTCTAGTCGATTGGTTAATAGACGTTGCTGAGGAATACAAGCTTGTATCAGACACCCTATATCTCACTGTATCACACATTGACAGATACTTATCCTGGCATGCTGTTGACAGAAACAAGCTACAACTTCTTGGTGTTTGTTGCATGCTAATTGCATCGAAGTATGAAGAGATCAATCCTCCTCACGTTGAAGACTTCTGCTATATAACTGATAATGCGTATACCATTGAACAGGCTCCAGACTTGGAATTTGAGTTCTTGAGTAGTTATCTTGCGGAGCTAAGTTTGTTAGACCACCGTTTTGTTCAATTCTTACCTTCAAAGATCGCTGCATCAGCCATTTTTCTTTCGAGAATGACAATCAAACCACAGAACCATCCTTGGTGTTTAGCACTACAACATTGCTCCGGTTACAGGCCATCTCAATTGAAGGAATGCATTCTTGCCATTCATGACTTGCAATTAAATAGAAAAAAAAGCTCTTTACTAGCTTTAAGAGACAAGTACAAGCAGCATAAGTTCATGTGTGTGGCAGAGCTATCGTCTCCCCCAGAAATTCCTGCACATTATTTCGAGGACATTGATCAGCAATCATTCAACAGGTTCTTAAGAACATAACTGGTCGATGCCTCGATGCTTAAACTCTTTCTCTTCCATTGGCTAGCATGACATGCACAGTTAACCATGCACAAATAATGAGAAGTAGGTACTTATTAGATAGAAGATACCCATTCTTACTTGTTAGATAGGCTATTGAATCATAATCATGGGTTGATTTAGCATAGGCCCAGCTTTAGAACATTTTTTTATTAGTAATCAGGTTTAGGCATAAACATCGGCATTTTTAGCTTAGTGGTGCCGACGGCCGCCCTTGTAGGACTTAGTTTGAGGCTTCAGGGAGGCGTTTTTAAGTTTTTAAGTTTTTTTTTTTTTTTTTTTGTTACTATACAGCAGGCAAGTAAATTATTGGTTCGACCCTTCCATGTGAG

Coding sequence (CDS)

ATGGTTAATGGCAAATCTTATGCTATGCGCTCTTCGTGTATAAATCTTGAGTTCATCAATCTCTCCGACCTCCTCCAAGGCCGGATTAACAGTTCCCGCCTCCGTCAAATTCACGGCCGCGTCTTTCGTCTGCTGAAGCATCAGGACAATCTAATCGCAACTCGACTTATCGGCCACTACCCATATTCTGTTGGAATCAGAGTCTTCAATCAACTCCTACGGCCGAACATATTTCCTTGCAACGCGATTATCAGAGTACTTGCTGAATCGAATTGTTCGTTTCTTGCCTTTTCCATCTTCAAATCTTTGAAGCGGCTTTCACTTTCCCCTAATGATTTCACTTTTTCTTTCCTTCTCAAGGCGTTTCACCGTTCCAGCCATTCTCCTAATGTGAAACAAGTTCATACTCATGTCATGAAAATGGGTTATTTGGGTGATTCTTTTATCTCCAATGCTCTTCTTGGAGTCTACGCGAGAGGTTTGAAGGATATGGGTTCTGCACATAACATGTTCGACGAAATGTCTGAGAGAGAAATGGCTTGTTGTTGGACTTCTTTGATTGCTGGCTATGCTCATATGGGTCTTGCTGAAAAGGCTCTGCTGCTTTTTGTGATGATGATCAAAGAGAATATCCAGCCCGAGGATGACACCATGGTTAGTGTTCTATCTGCTTGTTCTAAGCTTCAAATTGCTGAAATTGAAAAATGGGTTGCAGAATTAACACAATTGGTTAATGAATTTGATTCCTGTTGTGATTCAATCAATATTGTTCTTGTTTATCTATATGGGAAGTGGGGGAAGATTGAAAAGAGTGAAGAAAAGTTCAATGAAATTGTTGATAAGAGAAGTGCTATTGTCTGGAATTCAATGATAAATGCATATTTTCAAAACGGTTGCCCTGTGGAGGCCTTGACCCTTTTCCGTCTAATGCTTGAGAATCCCCATTGCAAACCCAACCATGTCACAATGGTTACCGTCCTTTCGGCTTGCGCTCAAATTGGAGATTTGCAGCTCGGTCGTCGGGTTCATGAAGCTCTCGAACACGGCGGGCGCAGAGGTATCATTGCATCAAACAAAATGTTGGCCACTGCATTGATTGATATGTATTGTAAAAGTGGGAGTTTGGAGAAGGCAAAACAAGTTTTTCATGAACTAATCTGCAAAGATGTAATCTCCTTCAATGCCATGATCATGGGCCTTGCAGTAAACGGCAAAGCCGATGAGGCATTGAAGCTTTTCTCCCAAATGCAAGAGTCTGATATAAAACCAACCACTGGAACATTCATTGGCTTACTATCTGCTTGTAGCCATTCGGGGTTTCTCGAACAAGGACGTCAAATTTTCATTCAAATGGCTACCCGCTACTCAACGTCGCCTAGTCTAGACCACTATGCTTGTTACATTGATCTCCTTGCTCGAGCGGGCTGCGTCGAGGACGCTCTTGAAGTTGTTTCAACCATGCCTTTTGAACCTAATAACTTTGTTTGGAGTTCTCTGCTGAGAGGCTGCCTGCTTCATTCGAGATTCGAGTTGGCACGATATGTTTCGAAAAAGCTTGTTGAAGTAGATCCCGAAAGCTCTGCTGGGTATGTAATGCAGGCGAATTCATTTGCCACTGATCTTCAATGGGATGATGTCTCGGCTTTGAGATGGTTTATGAGAGAAAAGGGTGTTCATAAGCAGCCAGGGCGGAGTTGGATCAGTATAGATGGGACTGTGCATGAATTCTTCTCGGCAACCAAATCACATCCTTGTGTGGATCTGTTATACAGAGATTCTGGGCCCGCGGGTCCTGGACCCTCCGCCGACGGCATCGGCGGGCTCGAAACTGGGGCCGGACCCGGAGCCGCCTTCAACTTCTTCTTACTGGGTGCAGGAGCCGGAACCGCCGCTGGTGGTGATGCCAGTGGTGCAGGAGGTGGAGTGGCTGGTGGTGGGGTTGCAGGTGGTGGGGTTGCCGGTGGTGGGGATGCTGGAGGAGGAGTGGCCGGCGGTGGGGATGCCGGAGGAGGAGTGGCTGGTGGTGGGGAAGCTGGAGGTGGGGAAGCTGGAGGAGGGGTGGCCGGTGGTGGGGATGCCGGAGGAGGAGTGGCTGGAGGTGGGGAAGCCGGAGGGGGAGTGGCAGGAGGAGTGGCAGGTGGGGGAGCTGATACTGGAGGAGGAGTGGCGGGAGGAGGGGCGGTGGTGATTCTCCTCCCCACCTCCGTTTGCCTTCTCCGACTAACTCTACAACTTTTTCTCGTCGTTTCTCCGCCTCTCGTAATCGGATTCTTTCCGTCTCCCATGGACCCGCCGGAGTGCCAGAAGCCTTCCGTCCGAACGTCGAAGAAGCGCAACTCGGAGGAAGACTTGCAACTGGCCACTGCCAACAAGAGAGCCGTGCTTGACGAGATCACCAACTCGTTGATCTTCAGTTCGAATCAGTGCTCTCTTTCTGATCAGGAGATGACGGATAAGCATCTGGACGAGGAGAAACTTCCTGAAGGAAGGTCTGTTGATTGTTCTAAGAAGTCTGGCTCTGCTTCTAGCATTTATAACCAACTCCGATTAATGGAGATGGAATTACACATGAAGGTACTGCCAAACATTGGAAAGGCTCACAACGGTCACTCCAGTGTAACGTTCCCTCGTTTCCGAGAAATTCTAGTCGATTGGTTAATAGACGTTGCTGAGGAATACAAGCTTGTATCAGACACCCTATATCTCACTGTATCACACATTGACAGATACTTATCCTGGCATGCTGTTGACAGAAACAAGCTACAACTTCTTGGTGTTTGTTGCATGCTAATTGCATCGAAGTATGAAGAGATCAATCCTCCTCACGTTGAAGACTTCTGCTATATAACTGATAATGCGTATACCATTGAACAGGCTCCAGACTTGGAATTTGAGTTCTTGAGTAGTTATCTTGCGGAGCTAAGTTTGTTAGACCACCGTTTTGTTCAATTCTTACCTTCAAAGATCGCTGCATCAGCCATTTTTCTTTCGAGAATGACAATCAAACCACAGAACCATCCTTGGTGTTTAGCACTACAACATTGCTCCGGTTACAGGCCATCTCAATTGAAGGAATGCATTCTTGCCATTCATGACTTGCAATTAAATAGAAAAAAAAGCTCTTTACTAGCTTTAAGAGACAAGTACAAGCAGCATAAGTTCATGTGTGTGGCAGAGCTATCGTCTCCCCCAGAAATTCCTGCACATTATTTCGAGGACATTGATCAGCAATCATTCAACAGGTTCTTAAGAACATAA
Homology
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BLAST of CmoCh19G005800 vs. Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 4.8e-90
Identity = 195/570 (34.21%), Postives = 325/570 (57.02%), Query Frame = 1 

Query: 22  SDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHYPYSVGI-----RVFNQLLRPN 81
           + L+    + ++L+QIH R+  L       + T+LI H   S G      +VF+ L RP 
Sbjct: 25  ASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLI-HASSSFGDITFARQVFDDLPRPQ 84

Query: 82  IFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQVHT 141
           IFP NAIIR  + +N    A  ++ +++   +SP+ FTF  LLKA    SH    + VH 
Sbjct: 85  IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 144

Query: 142 HVMKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMACC-WTSLIAGYAHMGL 201
            V ++G+  D F+ N L+ +YA+  + +GSA  +F+ +   E     WT++++ YA  G 
Sbjct: 145 QVFRLGFDADVFVQNGLIALYAK-CRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 204

Query: 202 AEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWV-AELTQLVNEFDSCCDSI 261
             +AL +F  M K +++P+   +VSVL+A + LQ  +  + + A + ++  E +     +
Sbjct: 205 PMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEP---DL 264

Query: 262 NIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCPVEALTLFRLMLENP 321
            I L  +Y K G++  ++  F+++    + I+WN+MI+ Y +NG   EA+ +F  M+ N 
Sbjct: 265 LISLNTMYAKCGQVATAKILFDKMKSP-NLILWNAMISGYAKNGYAREAIDMFHEMI-NK 324

Query: 322 HCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHGGRRGIIASNKMLATALIDMYCKSGS 381
             +P+ +++ + +SACAQ+G L+  R ++E +     R  +     +++ALIDM+ K GS
Sbjct: 325 DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDV----FISSALIDMFAKCGS 384

Query: 382 LEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTTGTFIGLLSA 441
           +E A+ VF   + +DV+ ++AMI+G  ++G+A EA+ L+  M+   + P   TF+GLL A
Sbjct: 385 VEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMA 444

Query: 442 CSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDALEVVSTMPFEPNNF 501
           C+HSG + +G   F +MA  +  +P   HYAC IDLL RAG ++ A EV+  MP +P   
Sbjct: 445 CNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVT 504

Query: 502 VWSSLLRGCLLHSRFELARYVSKKLVEVDPESSAGYVMQANSFATDLQWDDVSALRWFMR 561
           VW +LL  C  H   EL  Y +++L  +DP ++  YV  +N +A    WD V+ +R  M+
Sbjct: 505 VWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMK 564

Query: 562 EKGVHKQPGRSWISIDGTVHEFFSATKSHP 585
           EKG++K  G SW+ + G +  F    KSHP
Sbjct: 565 EKGLNKDVGCSWVEVRGRLEAFRVGDKSHP 582

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BLAST of CmoCh19G005800 vs. Swiss-Prot
Match: PP261_ARATH (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 8.2e-90
Identity = 193/580 (33.28%), Postives = 323/580 (55.69%), Query Frame = 1 

Query: 30  NSSRLRQIHGRVFRLLKHQDNLIATRLIGHYPY----SVGIRVFNQLLRPNIFPCNAIIR 89
           N ++++Q+H ++ R   H+D  IA +LI         ++ +RVFNQ+  PN+  CN++IR
Sbjct: 31  NLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIR 90

Query: 90  VLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQVHTHVMKMGYLG 149
             A+++  + AF +F  ++R  L  ++FT+ FLLKA    S  P VK +H H+ K+G   
Sbjct: 91  AHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSS 150

Query: 150 DSFISNALLGVYAR-GLKDMGSAHNMFDEMSEREMACCWTSLIAGYAHMGLAEKALLLFV 209
           D ++ NAL+  Y+R G   +  A  +F++MSER+    W S++ G    G    A  LF 
Sbjct: 151 DIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVS-WNSMLGGLVKAGELRDARRLFD 210

Query: 210 MMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAELTQLVNEFDSCCDSINIVLVYLYGK 269
            M + ++   + TM+   + C ++  A       EL + + E ++   S    +V  Y K
Sbjct: 211 EMPQRDLISWN-TMLDGYARCREMSKA------FELFEKMPERNTVSWS---TMVMGYSK 270

Query: 270 WGKIEKSEEKFNEI-VDKRSAIVWNSMINAYFQNGCPVEALTLFRLMLENPHCKPNHVTM 329
            G +E +   F+++ +  ++ + W  +I  Y + G   EA  L   M+ +   K +   +
Sbjct: 271 AGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASG-LKFDAAAV 330

Query: 330 VTVLSACAQIGDLQLGRRVHEALEHGGRRGIIASNKMLATALIDMYCKSGSLEKAKQVFH 389
           +++L+AC + G L LG R+H  L    +R  + SN  +  AL+DMY K G+L+KA  VF+
Sbjct: 331 ISILAACTESGLLSLGMRIHSIL----KRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFN 390

Query: 390 ELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTTGTFIGLLSACSHSGFLEQ 449
           ++  KD++S+N M+ GL V+G   EA++LFS+M+   I+P   TFI +L +C+H+G +++
Sbjct: 391 DIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDE 450

Query: 450 GRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDALEVVSTMPFEPNNFVWSSLLRGC 509
           G   F  M   Y   P ++HY C +DLL R G +++A++VV TMP EPN  +W +LL  C
Sbjct: 451 GIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGAC 510

Query: 510 LLHSRFELARYVSKKLVEVDPESSAGYVMQANSFATDLQWDDVSALRWFMREKGVHKQPG 569
            +H+  ++A+ V   LV++DP     Y + +N +A    W+ V+ +R  M+  GV K  G
Sbjct: 511 RMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSG 570

Query: 570 RSWISIDGTVHEFFSATKSHPCVDLLYRDSG----PAGPG 600
            S + ++  +HEF    KSHP  D +Y+  G    P  PG
Sbjct: 571 ASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLIEPPDPG 594

[Close]
BLAST of CmoCh19G005800 vs. Swiss-Prot
Match: PP219_ARATH (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 3.1e-89
Identity = 189/567 (33.33%), Postives = 303/567 (53.44%), Query Frame = 1 

Query: 32  SRLRQIHGRVFRLLKHQD----NLIATRLIGHYPYSVGIRVFNQLLRPNIFPCNAIIRVL 91
           + L+QIH  +     H D    NL+  R +          +F+    PNIF  N++I   
Sbjct: 27  NHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGF 86

Query: 92  AESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQVHTHVMKMGYLGDS 151
             ++       +F S+++  L  + FTF  +LKA  R+S       +H+ V+K G+  D 
Sbjct: 87  VNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDV 146

Query: 152 FISNALLGVYARGLKDMGSAHNMFDEMSEREMACCWTSLIAGYAHMGLAEKALLLFVMMI 211
               +LL +Y+ G   +  AH +FDE+ +R +   WT+L +GY   G   +A+ LF  M+
Sbjct: 147 AAMTSLLSIYS-GSGRLNDAHKLFDEIPDRSVVT-WTALFSGYTTSGRHREAIDLFKKMV 206

Query: 212 KENIQPEDDTMVSVLSACSKLQIAEIEKWVA----ELTQLVNEFDSCCDSINIVLVYLYG 271
           +  ++P+   +V VLSAC  +   +  +W+     E+    N F      +   LV LY 
Sbjct: 207 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSF------VRTTLVNLYA 266

Query: 272 KWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCPVEALTLFRLMLENPHCKPNHVTM 331
           K GK+EK+   F+ +V+K   + W++MI  Y  N  P E + LF  ML+  + KP+  ++
Sbjct: 267 KCGKMEKARSVFDSMVEK-DIVTWSTMIQGYASNSFPKEGIELFLQMLQE-NLKPDQFSI 326

Query: 332 VTVLSACAQIGDLQLGRRVHEALEHGGRRGIIASNKMLATALIDMYCKSGSLEKAKQVFH 391
           V  LS+CA +G L LG      ++    R    +N  +A ALIDMY K G++ +  +VF 
Sbjct: 327 VGFLSSCASLGALDLGEWGISLID----RHEFLTNLFMANALIDMYAKCGAMARGFEVFK 386

Query: 392 ELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTTGTFIGLLSACSHSGFLEQ 451
           E+  KD++  NA I GLA NG    +  +F Q ++  I P   TF+GLL  C H+G ++ 
Sbjct: 387 EMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQD 446

Query: 452 GRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDALEVVSTMPFEPNNFVWSSLLRGC 511
           G + F  ++  Y+   +++HY C +DL  RAG ++DA  ++  MP  PN  VW +LL GC
Sbjct: 447 GLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGC 506

Query: 512 LLHSRFELARYVSKKLVEVDPESSAGYVMQANSFATDLQWDDVSALRWFMREKGVHKQPG 571
            L    +LA  V K+L+ ++P ++  YV  +N ++   +WD+ + +R  M +KG+ K PG
Sbjct: 507 RLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPG 566

Query: 572 RSWISIDGTVHEFFSATKSHPCVDLLY 591
            SWI ++G VHEF +  KSHP  D +Y
Sbjct: 567 YSWIELEGKVHEFLADDKSHPLSDKIY 579

[Close]
BLAST of CmoCh19G005800 vs. Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 7.7e-88
Identity = 198/605 (32.73%), Postives = 322/605 (53.22%), Query Frame = 1 

Query: 24  LLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHYPYS------VGIRVFNQLLRPNI 83
           L++  ++  +L+Q HG + R     D   A++L      S         +VF+++ +PN 
Sbjct: 36  LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNS 95

Query: 84  FPCNAIIRVLAESNCSFLAFSIFKSLKRLSLS---PNDFTFSFLLKAFHRSSHSPNVKQV 143
           F  N +IR  A      L  SI+  L  +S S   PN +TF FL+KA    S     + +
Sbjct: 96  FAWNTLIRAYASGPDPVL--SIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 155

Query: 144 HTHVMKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMACCWTSLIAGYAHMG 203
           H   +K     D F++N+L+  Y     D+ SA  +F  + E+++   W S+I G+   G
Sbjct: 156 HGMAVKSAVGSDVFVANSLIHCYF-SCGDLDSACKVFTTIKEKDVVS-WNSMINGFVQKG 215

Query: 204 LAEKALLLFVMMIKENIQPEDDTMVSVLSACSK------------------------LQI 263
             +KAL LF  M  E+++    TMV VLSAC+K                        L  
Sbjct: 216 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLAN 275

Query: 264 AEIEKWV--AELTQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVD---KRSAI 323
           A ++ +     +      FD+  +  N+    +   +  I +  E   E+++   ++  +
Sbjct: 276 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYA-ISEDYEAAREVLNSMPQKDIV 335

Query: 324 VWNSMINAYFQNGCPVEALTLFRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEA 383
            WN++I+AY QNG P EAL +F  +    + K N +T+V+ LSACAQ+G L+LGR +H  
Sbjct: 336 AWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSY 395

Query: 384 LEHGGRRGIIASNKMLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGK 443
           ++  G    I  N  + +ALI MY K G LEK+++VF+ +  +DV  ++AMI GLA++G 
Sbjct: 396 IKKHG----IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGC 455

Query: 444 ADEALKLFSQMQESDIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYA 503
            +EA+ +F +MQE+++KP   TF  +  ACSH+G +++   +F QM + Y   P   HYA
Sbjct: 456 GNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYA 515

Query: 504 CYIDLLARAGCVEDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARYVSKKLVEVDPE 563
           C +D+L R+G +E A++ +  MP  P+  VW +LL  C +H+   LA     +L+E++P 
Sbjct: 516 CIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPR 575

Query: 564 SSAGYVMQANSFATDLQWDDVSALRWFMREKGVHKQPGRSWISIDGTVHEFFSATKSHPC 591
           +   +V+ +N +A   +W++VS LR  MR  G+ K+PG S I IDG +HEF S   +HP 
Sbjct: 576 NDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPM 631

[Close]
BLAST of CmoCh19G005800 vs. Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 5.7e-83
Identity = 174/469 (37.10%), Postives = 272/469 (58.00%), Query Frame = 1 

Query: 120 KAFHRSSHSPNVKQVHTHVMKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREM 179
           K F +S H   V   +T ++K GY    +I NA                 +FDE+  +++
Sbjct: 190 KVFDKSPHRDVVS--YTALIK-GYASRGYIENA---------------QKLFDEIPVKDV 249

Query: 180 ACCWTSLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEK---- 239
              W ++I+GYA  G  ++AL LF  M+K N++P++ TMV+V+SAC++    E+ +    
Sbjct: 250 VS-WNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHL 309

Query: 240 WVAELTQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYF 299
           W+ +     + F S    +N  L+ LY K G++E +   F E +  +  I WN++I  Y 
Sbjct: 310 WIDD-----HGFGSNLKIVN-ALIDLYSKCGELETACGLF-ERLPYKDVISWNTLIGGYT 369

Query: 300 QNGCPVEALTLFRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHGGRRGII 359
                 EAL LF+ ML +    PN VTM+++L ACA +G + +GR +H  ++   R   +
Sbjct: 370 HMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYIDK--RLKGV 429

Query: 360 ASNKMLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQ 419
            +   L T+LIDMY K G +E A QVF+ ++ K + S+NAMI G A++G+AD +  LFS+
Sbjct: 430 TNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSR 489

Query: 420 MQESDIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAG 479
           M++  I+P   TF+GLLSACSHSG L+ GR IF  M   Y  +P L+HY C IDLL  +G
Sbjct: 490 MRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSG 549

Query: 480 CVEDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARYVSKKLVEVDPESSAGYVMQAN 539
             ++A E+++ M  EP+  +W SLL+ C +H   EL    ++ L++++PE+   YV+ +N
Sbjct: 550 LFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSN 609

Query: 540 SFATDLQWDDVSALRWFMREKGVHKQPGRSWISIDGTVHEFFSATKSHP 585
            +A+  +W++V+  R  + +KG+ K PG S I ID  VHEF    K HP
Sbjct: 610 IYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHP 629

[Close]
BLAST of CmoCh19G005800 vs. TrEMBL
Match: A0A0A0K4I3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071580 PE=4 SV=1)

HSP 1 Score: 1025.4 bits (2650), Expect = 5.1e-296
Identity = 501/585 (85.64%), Postives = 541/585 (92.48%), Query Frame = 1 

Query: 9   MRSSCINLEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHYPYSVGIRV 68
           MR  C+N EFI+LSDLLQGRIN+S LRQIH RVFRLLKHQDNLIATRLIGHYP+SVG+RV
Sbjct: 1   MRCLCVNPEFISLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRV 60

Query: 69  FNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHS 128
           FNQL+RPNIFPCNAIIRVLAE N SF A SIFK LK LSLSPNDFTFSFLLKAFHRS ++
Sbjct: 61  FNQLIRPNIFPCNAIIRVLAEHNSSFFALSIFKYLKHLSLSPNDFTFSFLLKAFHRSCNA 120

Query: 129 PNVKQVHTHVMKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMACCWTSLIA 188
            NVKQVHTHV+KMGY GDSFISN+LLGVYARGLK+M SAH +FDEMS+REMACCWTSLIA
Sbjct: 121 LNVKQVHTHVLKMGYFGDSFISNSLLGVYARGLKEMASAHKLFDEMSDREMACCWTSLIA 180

Query: 189 GYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAELTQLVNEFD 248
           GYA MGLAEKA+LLF MM+KENIQPEDDT+VSVLSACSKLQIAEIEKWV EL QLVN+ D
Sbjct: 181 GYAQMGLAEKAMLLFFMMVKENIQPEDDTIVSVLSACSKLQIAEIEKWVVELRQLVNKCD 240

Query: 249 S---CCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCPVEALT 308
           S   CCDSINIVL+YLYGKWG +EKSEEKFNE+VDKRS +VWNSMINAYFQNG PVEALT
Sbjct: 241 SKRSCCDSINIVLIYLYGKWGMVEKSEEKFNEVVDKRSVLVWNSMINAYFQNGFPVEALT 300

Query: 309 LFRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHGGRRGIIASNKMLATAL 368
           LFRLM+ENPHCKPNHVTMVTV+SACAQIGDLQLG  VHE L+ GGR+GIIASNKMLAT+L
Sbjct: 301 LFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRGGRKGIIASNKMLATSL 360

Query: 369 IDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTT 428
           IDMYCK GSLE+AK+VFH+LI KDVI+FNAMIMGLAVN K DEALKLF+QMQE +I P+T
Sbjct: 361 IDMYCKCGSLERAKEVFHQLINKDVITFNAMIMGLAVNSKGDEALKLFAQMQEINIIPST 420

Query: 429 GTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDALEVVS 488
           GTFIGLLSACSHSGFLEQGRQIFI+M T Y  SPSL+HYACYIDLLARAG  +DALEV+S
Sbjct: 421 GTFIGLLSACSHSGFLEQGRQIFIEMTTHYLVSPSLEHYACYIDLLARAGHFDDALEVIS 480

Query: 489 TMPFEPNNFVWSSLLRGCLLHSRFELARYVSKKLVEVDPESSAGYVMQANSFATDLQWDD 548
           TMPFEPNNFVWSSLLRGCLLHSRFELA+YVSKKLVEVDPE+SAGYVMQANSFATDLQWDD
Sbjct: 481 TMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDD 540

Query: 549 VSALRWFMREKGVHKQPGRSWISIDGTVHEFFSATKSHPCVDLLY 591
           VSALRWFMREKGVHKQPG+SWISIDGTVHEFFSATKSHP VDLLY
Sbjct: 541 VSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLY 585

[Close]
BLAST of CmoCh19G005800 vs. TrEMBL
Match: M5W238_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021613mg PE=4 SV=1)

HSP 1 Score: 746.9 bits (1927), Expect = 3.5e-212
Identity = 362/569 (63.62%), Postives = 455/569 (79.96%), Query Frame = 1 

Query: 27  GRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHYPYSVGIRVFNQLLRPNIFPCNAIIRV 86
           GRI+  RL QIH +VF++   QDNLIATRLIGHYP  + +RVF+QL +PNIFP NAIIRV
Sbjct: 60  GRISYPRLLQIHAQVFQVGAQQDNLIATRLIGHYPSHLALRVFHQLQKPNIFPFNAIIRV 119

Query: 87  LAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQVHTHVMKMGYLGD 146
            AE      AFS+FKSLK+ SLSPNDFTFSFLLKA  RS +S  VKQ+HTHVMKMG+L +
Sbjct: 120 FAEEGLFSDAFSLFKSLKQTSLSPNDFTFSFLLKACFRSQNSRYVKQIHTHVMKMGFLCN 179

Query: 147 SFISNALLGVYARGLKDMGSAHNMFDEMSEREMACCWTSLIAGYAHMGLAEKALLLFVMM 206
           SF+  +LL VYA+GLKD+GSA  +FDEM E+ + CCWTSLIAGYA  G +E+ L LF+MM
Sbjct: 180 SFVCASLLAVYAKGLKDLGSARLVFDEMPEKSIVCCWTSLIAGYALSGQSEQVLRLFLMM 239

Query: 207 IKENIQPEDDTMVSVLSACSKLQIAEIEKWVAELTQLVNEFDSC---CDSINIVLVYLYG 266
           + EN++PEDDTMVSVLSACS L I +IEKWV  L+++V+  D+    CDS+N  LVYLYG
Sbjct: 240 VDENLRPEDDTMVSVLSACSNLDIVDIEKWVTILSKVVSNVDAKKFGCDSVNTALVYLYG 299

Query: 267 KWGKIEKSEEKFNEIVD--KRSAIVWNSMINAYFQNGCPVEALTLFRLMLENPHCKPNHV 326
           KWGK+EKS ++F++I D  K+S + WN+MI A+ QNG P+E+L+LFR+M+E+P  +PNHV
Sbjct: 300 KWGKVEKSRDRFDQISDNGKQSVLPWNAMIGAFVQNGFPMESLSLFRVMVEDPKYRPNHV 359

Query: 327 TMVTVLSACAQIGDLQLGRRVHEALEHGGRRGIIASNKMLATALIDMYCKSGSLEKAKQV 386
           TMV+VLSACAQIGDL LGR VHE L+  G +G+I SN++LATALIDMY K GSLE+AK+V
Sbjct: 360 TMVSVLSACAQIGDLDLGRWVHEYLKSKGSKGVIGSNRILATALIDMYSKCGSLERAKEV 419

Query: 387 FHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTTGTFIGLLSACSHSGFL 446
           F +++ KD++SFNAMIMGLAVN + +EAL+LFS++QE  ++P  GTF+G L ACSHSG  
Sbjct: 420 FDQMVSKDIVSFNAMIMGLAVNSEGEEALRLFSRIQEFGLQPNAGTFLGALCACSHSGLS 479

Query: 447 EQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDALEVVSTMPFEPNNFVWSSLLR 506
           E+GRQIF  M + +S S  L+HYACY+DLLAR G VE+ALEVV++MPFEPN+FVW +LL 
Sbjct: 480 EEGRQIFNDMTSSFSVSSKLEHYACYVDLLARVGLVEEALEVVTSMPFEPNSFVWGALLG 539

Query: 507 GCLLHSRFELARYVSKKLVEVDPESSAGYVMQANSFATDLQWDDVSALRWFMREKGVHKQ 566
           GCLLHSR +LA+YVS KLV  DP++S GY+M AN+FA+D +W DVSALRW MREKGV+KQ
Sbjct: 540 GCLLHSRVDLAQYVSNKLVRSDPDNSGGYIMLANAFASDRRWGDVSALRWVMREKGVNKQ 599

Query: 567 PGRSWISIDGTVHEFFSATKSHPCVDLLY 591
           PG SWISIDG VHEF     SHP ++ +Y
Sbjct: 600 PGCSWISIDGVVHEFLVGCPSHPQIESIY 628

[Close]
BLAST of CmoCh19G005800 vs. TrEMBL
Match: A0A061E036_THECC (Pentatricopeptide repeat-containing protein OS=Theobroma cacao GN=TCM_007174 PE=4 SV=1)

HSP 1 Score: 722.6 bits (1864), Expect = 7.0e-205
Identity = 356/585 (60.85%), Postives = 447/585 (76.41%), Query Frame = 1 

Query: 11  SSCINLEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHYPYSVGIRVFN 70
           SS  +  F NLS LLQGRI  S LRQIH R+FRL  HQDNL+ATRLIGHYP S  +RVFN
Sbjct: 48  SSTSSSNFHNLSLLLQGRILHSHLRQIHARIFRLNAHQDNLVATRLIGHYPSSFALRVFN 107

Query: 71  QLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPN 130
           QL  PNIFP NAIIRVLAE+   FLA S F +L + SLSPND TFSFLLKA   S+ +  
Sbjct: 108 QLHNPNIFPFNAIIRVLAENGLFFLACSFFNNLIQRSLSPNDLTFSFLLKACFLSNDAQY 167

Query: 131 VKQVHTHVMKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMACCWTSLIAGY 190
           V Q+HT+++K+GYL D  + N LL VYA+G KD+ SAH +FDEM E+     WT+LIA Y
Sbjct: 168 VNQIHTYIIKLGYLCDPTVCNGLLSVYAQGFKDVASAHKLFDEMPEKVSVTPWTNLIACY 227

Query: 191 AHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAELTQLVNEFDSC 250
           A  G  E+ L LF  MI++N++PE+DTMVSVLSACS  +I +IEKWV  L+++++  D+ 
Sbjct: 228 ARSGRNEEVLRLFCSMIEKNLRPENDTMVSVLSACSSAEIFDIEKWVTILSEIIHNSDNK 287

Query: 251 C---DSINIVLVYLYGKWGKIEKSEEKFNEI--VDKRSAIVWNSMINAYFQNGCPVEALT 310
               DS+NI L+YLYG+   +EKS E+FNEI  + K S I WN+MI AY QNGCP+EAL+
Sbjct: 288 IPNRDSVNIALIYLYGRLENVEKSRERFNEIYAIGKMSVIPWNAMIGAYVQNGCPMEALS 347

Query: 311 LFRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHGGRRGIIASNKMLATAL 370
           LF LM+E+ +C+PNHVTMV+VLSACAQ+GDL LG+ VH+ LE+ GR+G++ +N  LATAL
Sbjct: 348 LFHLMMEDSNCRPNHVTMVSVLSACAQMGDLDLGKWVHQYLEYNGRKGVLETNTFLATAL 407

Query: 371 IDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTT 430
           IDMY K G LE AK+VF ++I KDV+SFNAMIMGLA+NG+ +EA+ L S++QE  + P  
Sbjct: 408 IDMYSKCGDLEMAKRVFDQMISKDVVSFNAMIMGLAMNGEGEEAVSLLSKVQELGLHPNA 467

Query: 431 GTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDALEVVS 490
           GTF+GLL ACSHSG  E+GRQIF++M +R+S  P L+HYACYID+LAR G VE AL VV 
Sbjct: 468 GTFLGLLCACSHSGLSEEGRQIFLEMNSRFSVYPRLEHYACYIDILARVGLVEAALTVVD 527

Query: 491 TMPFEPNNFVWSSLLRGCLLHSRFELARYVSKKLVEVDPESSAGYVMQANSFATDLQWDD 550
           +MP+EPNNFVW +LL GC+LHSR +LA+ V KKLVEVDP++S GYVM AN+ A D +W+D
Sbjct: 528 SMPYEPNNFVWGALLGGCVLHSRADLAQKVYKKLVEVDPQNSGGYVMLANTLAVDHRWND 587

Query: 551 VSALRWFMREKGVHKQPGRSWISIDGTVHEFFSATKSHPCVDLLY 591
           VS LRW MREKGV KQPG SWISIDG VHEF + + SHP ++ +Y
Sbjct: 588 VSVLRWLMREKGVKKQPGHSWISIDGVVHEFLAGSPSHPKMESIY 632

[Close]
BLAST of CmoCh19G005800 vs. TrEMBL
Match: F6H681_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g00370 PE=4 SV=1)

HSP 1 Score: 719.2 bits (1855), Expect = 7.8e-204
Identity = 347/572 (60.66%), Postives = 443/572 (77.45%), Query Frame = 1 

Query: 24  LLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHYPYSVGIRVFNQLLRPNIFPCNAI 83
           +LQG I+ S L QIH ++FR+L HQDNL+ATRLIGHYP  + +RVF+QLL PNIFP NAI
Sbjct: 1   MLQGHISHSHLLQIHAQIFRVLAHQDNLVATRLIGHYPSRLALRVFDQLLTPNIFPFNAI 60

Query: 84  IRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQVHTHVMKMGY 143
           IRVL E +    AF +FK+L + SLSPNDFTFSFLLKA  RS+ +  VKQ HTHV+K+G+
Sbjct: 61  IRVLGEESLCSCAFFVFKALLQRSLSPNDFTFSFLLKACFRSNDAKYVKQAHTHVVKLGF 120

Query: 144 LGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMACCWTSLIAGYAHMGLAEKALLLF 203
           + DSFI N LL  YA G KDM S   +FDEM +R M  CWTSLIAG A  G  E+ L LF
Sbjct: 121 VSDSFICNGLLVAYAMGFKDMISGRKVFDEMPDRAMVRCWTSLIAGSAQSGQTEEVLRLF 180

Query: 204 VMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAELTQLVNEFDSCC---DSINIVLVY 263
            MM+KEN++PE+DT+VSVLSACSKL+  EIEKWV  L++ +N+ D+     DS+N VL Y
Sbjct: 181 FMMVKENLRPENDTIVSVLSACSKLEAVEIEKWVMILSEFINDDDTGSFGRDSVNTVLAY 240

Query: 264 LYGKWGKIEKSEEKFNEIVD--KRSAIVWNSMINAYFQNGCPVEALTLFRLMLENPHCKP 323
           LYGKWGK+EK +E+F+EIV   KRS + WN +I+AY QNGC  EAL+LFR+M+E+ + +P
Sbjct: 241 LYGKWGKVEKCKERFDEIVGIGKRSVLPWNVIISAYVQNGCSFEALSLFRVMIEDLNLRP 300

Query: 324 NHVTMVTVLSACAQIGDLQLGRRVHEALEHGGRRGIIASNKMLATALIDMYCKSGSLEKA 383
           NHVTMV+VLSACAQ+GDL LG+ +H  ++  G + I+ SN  LATALIDMY K G+L KA
Sbjct: 301 NHVTMVSVLSACAQVGDLDLGKWIHGYVKSEGCKAIVESNTFLATALIDMYSKCGNLGKA 360

Query: 384 KQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTTGTFIGLLSACSHS 443
           K VF +++ KDV+SFNAMIMGLA+NG+ +EAL+LFS+MQE  ++P +GTF+G+L ACSHS
Sbjct: 361 KDVFEQMVSKDVVSFNAMIMGLAINGEGEEALRLFSKMQELSLRPNSGTFLGVLCACSHS 420

Query: 444 GFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDALEVVSTMPFEPNNFVWSS 503
           G L+ GRQ+F+ M   +S  P L+HYACY+DLLAR G +E+A EVV++MPF PNNFVW +
Sbjct: 421 GLLDTGRQMFLDMIPHFSVPPELEHYACYVDLLARVGLLEEAFEVVASMPFVPNNFVWGA 480

Query: 504 LLRGCLLHSRFELARYVSKKLVEVDPESSAGYVMQANSFATDLQWDDVSALRWFMREKGV 563
           LL+GC LHSR ELA+ VS+KLV+VDPE+SAGYVM +N+ A+D QW +VS LRW MREKGV
Sbjct: 481 LLQGCRLHSRLELAQDVSQKLVKVDPENSAGYVMFSNALASDQQWGEVSGLRWLMREKGV 540

Query: 564 HKQPGRSWISIDGTVHEFFSATKSHPCVDLLY 591
            K PG SWIS++  VHEF + + SHP +D +Y
Sbjct: 541 RKHPGCSWISVNRVVHEFLAGSLSHPQIDSIY 572

[Close]
BLAST of CmoCh19G005800 vs. TrEMBL
Match: A0A067LJI3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16282 PE=4 SV=1)

HSP 1 Score: 713.8 bits (1841), Expect = 3.3e-202
Identity = 350/585 (59.83%), Postives = 447/585 (76.41%), Query Frame = 1 

Query: 9   MRSSCINLEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHYPYSVGIRV 68
           MR+  I L    LS LLQGRI    L QIH +VFRL  HQDNLIATRLIGHYP    IR+
Sbjct: 1   MRNQAI-LTSATLSALLQGRIPIPHLLQIHAKVFRLDAHQDNLIATRLIGHYPSKFSIRL 60

Query: 69  FNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHS 128
           FNQ+  PN+FP NAIIRVLA       +F +F+ LKR  L PND TFSF+LKA   S + 
Sbjct: 61  FNQIQNPNLFPFNAIIRVLAHEGDFHGSFLLFRRLKRQHLYPNDLTFSFILKACFGSKNV 120

Query: 129 PNVKQVHTHVMKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMACCWTSLIA 188
             V+QVHTH+ K+G++ D F+ NALL +YA+G KD+ SA  +FDEM E+ + CCWTSLIA
Sbjct: 121 FYVEQVHTHIFKVGFITDPFVCNALLALYAKGFKDLVSARMLFDEMPEKGVVCCWTSLIA 180

Query: 189 GYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAELTQLVNEFD 248
           G+A  G AE+AL  F +M+KEN+ PEDDT+VSVLSACS L+I +IEKW+  L +L+NE D
Sbjct: 181 GFAQSGYAEEALRFFRLMVKENLSPEDDTLVSVLSACSSLEIHQIEKWLTLLLELINEID 240

Query: 249 SCC-DSINIVLVYLYGKWGKIEKSEEKFNEIVD--KRSAIVWNSMINAYFQNGCPVEALT 308
           S   DS+N VLVYLYGKWG IEKS E+F++I D  KRS + WNSMINAY QNG  +  L 
Sbjct: 241 SKIRDSVNNVLVYLYGKWGNIEKSRERFDDISDDGKRSVLPWNSMINAYVQNGDSLGGLN 300

Query: 309 LFRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHGGRRGIIASNKMLATAL 368
           LFRLM+ +P C+PNHVTMV+VLSACAQIGDL+LG  VH+ ++  G++G++ SN++LATA 
Sbjct: 301 LFRLMIMDPTCRPNHVTMVSVLSACAQIGDLELGMWVHQYMKSRGQKGVLQSNRILATAF 360

Query: 369 IDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTT 428
           IDMY K GSL+KAK VF++++ KDV+SFNAMIMGLA+NG+  +A+ LFS+MQE  + P  
Sbjct: 361 IDMYSKCGSLDKAKDVFNQMVSKDVVSFNAMIMGLAINGEGVKAVNLFSKMQEFGLHPNP 420

Query: 429 GTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDALEVVS 488
           GTF+GLL ACSHSG  ++G++IF+ M++R+   P L+HYACYIDLLAR G +E+A +V +
Sbjct: 421 GTFLGLLWACSHSGLSDEGQKIFLDMSSRFLVRPKLEHYACYIDLLAREGHLEEAFKVTT 480

Query: 489 TMPFEPNNFVWSSLLRGCLLHSRFELARYVSKKLVEVDPESSAGYVMQANSFATDLQWDD 548
           +MPF+PNNFVW +LL GCLLH + +LA+ + K+LVEVDP +SAGYVM AN FA D +W+D
Sbjct: 481 SMPFKPNNFVWGALLGGCLLHYKVDLAKIIYKRLVEVDPANSAGYVMLANIFAVDHKWND 540

Query: 549 VSALRWFMREKGVHKQPGRSWISIDGTVHEFFSATKSHPCVDLLY 591
           VSALRWFMREKGV KQPG SWI+++G VHEF   + SHP ++ +Y
Sbjct: 541 VSALRWFMREKGVKKQPGCSWINVNGIVHEFLVGSPSHPQMESIY 584

[Close]
BLAST of CmoCh19G005800 vs. TAIR10
Match: AT3G12770.1 (AT3G12770.1 mitochondrial editing factor 22)

HSP 1 Score: 334.3 bits (856), Expect = 2.7e-91
Identity = 195/570 (34.21%), Postives = 325/570 (57.02%), Query Frame = 1 

Query: 22  SDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHYPYSVGI-----RVFNQLLRPN 81
           + L+    + ++L+QIH R+  L       + T+LI H   S G      +VF+ L RP 
Sbjct: 25  ASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLI-HASSSFGDITFARQVFDDLPRPQ 84

Query: 82  IFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQVHT 141
           IFP NAIIR  + +N    A  ++ +++   +SP+ FTF  LLKA    SH    + VH 
Sbjct: 85  IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 144

Query: 142 HVMKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMACC-WTSLIAGYAHMGL 201
            V ++G+  D F+ N L+ +YA+  + +GSA  +F+ +   E     WT++++ YA  G 
Sbjct: 145 QVFRLGFDADVFVQNGLIALYAK-CRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 204

Query: 202 AEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWV-AELTQLVNEFDSCCDSI 261
             +AL +F  M K +++P+   +VSVL+A + LQ  +  + + A + ++  E +     +
Sbjct: 205 PMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEP---DL 264

Query: 262 NIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCPVEALTLFRLMLENP 321
            I L  +Y K G++  ++  F+++    + I+WN+MI+ Y +NG   EA+ +F  M+ N 
Sbjct: 265 LISLNTMYAKCGQVATAKILFDKMKSP-NLILWNAMISGYAKNGYAREAIDMFHEMI-NK 324

Query: 322 HCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHGGRRGIIASNKMLATALIDMYCKSGS 381
             +P+ +++ + +SACAQ+G L+  R ++E +     R  +     +++ALIDM+ K GS
Sbjct: 325 DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDV----FISSALIDMFAKCGS 384

Query: 382 LEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTTGTFIGLLSA 441
           +E A+ VF   + +DV+ ++AMI+G  ++G+A EA+ L+  M+   + P   TF+GLL A
Sbjct: 385 VEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMA 444

Query: 442 CSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDALEVVSTMPFEPNNF 501
           C+HSG + +G   F +MA  +  +P   HYAC IDLL RAG ++ A EV+  MP +P   
Sbjct: 445 CNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVT 504

Query: 502 VWSSLLRGCLLHSRFELARYVSKKLVEVDPESSAGYVMQANSFATDLQWDDVSALRWFMR 561
           VW +LL  C  H   EL  Y +++L  +DP ++  YV  +N +A    WD V+ +R  M+
Sbjct: 505 VWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMK 564

Query: 562 EKGVHKQPGRSWISIDGTVHEFFSATKSHP 585
           EKG++K  G SW+ + G +  F    KSHP
Sbjct: 565 EKGLNKDVGCSWVEVRGRLEAFRVGDKSHP 582

[Close]
BLAST of CmoCh19G005800 vs. TAIR10
Match: AT3G29230.1 (AT3G29230.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 333.6 bits (854), Expect = 4.6e-91
Identity = 193/580 (33.28%), Postives = 323/580 (55.69%), Query Frame = 1 

Query: 30  NSSRLRQIHGRVFRLLKHQDNLIATRLIGHYPY----SVGIRVFNQLLRPNIFPCNAIIR 89
           N ++++Q+H ++ R   H+D  IA +LI         ++ +RVFNQ+  PN+  CN++IR
Sbjct: 31  NLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIR 90

Query: 90  VLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQVHTHVMKMGYLG 149
             A+++  + AF +F  ++R  L  ++FT+ FLLKA    S  P VK +H H+ K+G   
Sbjct: 91  AHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSS 150

Query: 150 DSFISNALLGVYAR-GLKDMGSAHNMFDEMSEREMACCWTSLIAGYAHMGLAEKALLLFV 209
           D ++ NAL+  Y+R G   +  A  +F++MSER+    W S++ G    G    A  LF 
Sbjct: 151 DIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVS-WNSMLGGLVKAGELRDARRLFD 210

Query: 210 MMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAELTQLVNEFDSCCDSINIVLVYLYGK 269
            M + ++   + TM+   + C ++  A       EL + + E ++   S    +V  Y K
Sbjct: 211 EMPQRDLISWN-TMLDGYARCREMSKA------FELFEKMPERNTVSWS---TMVMGYSK 270

Query: 270 WGKIEKSEEKFNEI-VDKRSAIVWNSMINAYFQNGCPVEALTLFRLMLENPHCKPNHVTM 329
            G +E +   F+++ +  ++ + W  +I  Y + G   EA  L   M+ +   K +   +
Sbjct: 271 AGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASG-LKFDAAAV 330

Query: 330 VTVLSACAQIGDLQLGRRVHEALEHGGRRGIIASNKMLATALIDMYCKSGSLEKAKQVFH 389
           +++L+AC + G L LG R+H  L    +R  + SN  +  AL+DMY K G+L+KA  VF+
Sbjct: 331 ISILAACTESGLLSLGMRIHSIL----KRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFN 390

Query: 390 ELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTTGTFIGLLSACSHSGFLEQ 449
           ++  KD++S+N M+ GL V+G   EA++LFS+M+   I+P   TFI +L +C+H+G +++
Sbjct: 391 DIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDE 450

Query: 450 GRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDALEVVSTMPFEPNNFVWSSLLRGC 509
           G   F  M   Y   P ++HY C +DLL R G +++A++VV TMP EPN  +W +LL  C
Sbjct: 451 GIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGAC 510

Query: 510 LLHSRFELARYVSKKLVEVDPESSAGYVMQANSFATDLQWDDVSALRWFMREKGVHKQPG 569
            +H+  ++A+ V   LV++DP     Y + +N +A    W+ V+ +R  M+  GV K  G
Sbjct: 511 RMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSG 570

Query: 570 RSWISIDGTVHEFFSATKSHPCVDLLYRDSG----PAGPG 600
            S + ++  +HEF    KSHP  D +Y+  G    P  PG
Sbjct: 571 ASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLIEPPDPG 594

[Close]
BLAST of CmoCh19G005800 vs. TAIR10
Match: AT3G08820.1 (AT3G08820.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 331.6 bits (849), Expect = 1.8e-90
Identity = 189/567 (33.33%), Postives = 303/567 (53.44%), Query Frame = 1 

Query: 32  SRLRQIHGRVFRLLKHQD----NLIATRLIGHYPYSVGIRVFNQLLRPNIFPCNAIIRVL 91
           + L+QIH  +     H D    NL+  R +          +F+    PNIF  N++I   
Sbjct: 27  NHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGF 86

Query: 92  AESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQVHTHVMKMGYLGDS 151
             ++       +F S+++  L  + FTF  +LKA  R+S       +H+ V+K G+  D 
Sbjct: 87  VNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDV 146

Query: 152 FISNALLGVYARGLKDMGSAHNMFDEMSEREMACCWTSLIAGYAHMGLAEKALLLFVMMI 211
               +LL +Y+ G   +  AH +FDE+ +R +   WT+L +GY   G   +A+ LF  M+
Sbjct: 147 AAMTSLLSIYS-GSGRLNDAHKLFDEIPDRSVVT-WTALFSGYTTSGRHREAIDLFKKMV 206

Query: 212 KENIQPEDDTMVSVLSACSKLQIAEIEKWVA----ELTQLVNEFDSCCDSINIVLVYLYG 271
           +  ++P+   +V VLSAC  +   +  +W+     E+    N F      +   LV LY 
Sbjct: 207 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSF------VRTTLVNLYA 266

Query: 272 KWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCPVEALTLFRLMLENPHCKPNHVTM 331
           K GK+EK+   F+ +V+K   + W++MI  Y  N  P E + LF  ML+  + KP+  ++
Sbjct: 267 KCGKMEKARSVFDSMVEK-DIVTWSTMIQGYASNSFPKEGIELFLQMLQE-NLKPDQFSI 326

Query: 332 VTVLSACAQIGDLQLGRRVHEALEHGGRRGIIASNKMLATALIDMYCKSGSLEKAKQVFH 391
           V  LS+CA +G L LG      ++    R    +N  +A ALIDMY K G++ +  +VF 
Sbjct: 327 VGFLSSCASLGALDLGEWGISLID----RHEFLTNLFMANALIDMYAKCGAMARGFEVFK 386

Query: 392 ELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTTGTFIGLLSACSHSGFLEQ 451
           E+  KD++  NA I GLA NG    +  +F Q ++  I P   TF+GLL  C H+G ++ 
Sbjct: 387 EMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQD 446

Query: 452 GRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDALEVVSTMPFEPNNFVWSSLLRGC 511
           G + F  ++  Y+   +++HY C +DL  RAG ++DA  ++  MP  PN  VW +LL GC
Sbjct: 447 GLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGC 506

Query: 512 LLHSRFELARYVSKKLVEVDPESSAGYVMQANSFATDLQWDDVSALRWFMREKGVHKQPG 571
            L    +LA  V K+L+ ++P ++  YV  +N ++   +WD+ + +R  M +KG+ K PG
Sbjct: 507 RLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPG 566

Query: 572 RSWISIDGTVHEFFSATKSHPCVDLLY 591
            SWI ++G VHEF +  KSHP  D +Y
Sbjct: 567 YSWIELEGKVHEFLADDKSHPLSDKIY 579

[Close]
BLAST of CmoCh19G005800 vs. TAIR10
Match: AT2G29760.1 (AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 327.0 bits (837), Expect = 4.3e-89
Identity = 198/605 (32.73%), Postives = 322/605 (53.22%), Query Frame = 1 

Query: 24  LLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHYPYS------VGIRVFNQLLRPNI 83
           L++  ++  +L+Q HG + R     D   A++L      S         +VF+++ +PN 
Sbjct: 36  LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNS 95

Query: 84  FPCNAIIRVLAESNCSFLAFSIFKSLKRLSLS---PNDFTFSFLLKAFHRSSHSPNVKQV 143
           F  N +IR  A      L  SI+  L  +S S   PN +TF FL+KA    S     + +
Sbjct: 96  FAWNTLIRAYASGPDPVL--SIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 155

Query: 144 HTHVMKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMACCWTSLIAGYAHMG 203
           H   +K     D F++N+L+  Y     D+ SA  +F  + E+++   W S+I G+   G
Sbjct: 156 HGMAVKSAVGSDVFVANSLIHCYF-SCGDLDSACKVFTTIKEKDVVS-WNSMINGFVQKG 215

Query: 204 LAEKALLLFVMMIKENIQPEDDTMVSVLSACSK------------------------LQI 263
             +KAL LF  M  E+++    TMV VLSAC+K                        L  
Sbjct: 216 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLAN 275

Query: 264 AEIEKWV--AELTQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVD---KRSAI 323
           A ++ +     +      FD+  +  N+    +   +  I +  E   E+++   ++  +
Sbjct: 276 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYA-ISEDYEAAREVLNSMPQKDIV 335

Query: 324 VWNSMINAYFQNGCPVEALTLFRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEA 383
            WN++I+AY QNG P EAL +F  +    + K N +T+V+ LSACAQ+G L+LGR +H  
Sbjct: 336 AWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSY 395

Query: 384 LEHGGRRGIIASNKMLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGK 443
           ++  G    I  N  + +ALI MY K G LEK+++VF+ +  +DV  ++AMI GLA++G 
Sbjct: 396 IKKHG----IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGC 455

Query: 444 ADEALKLFSQMQESDIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYA 503
            +EA+ +F +MQE+++KP   TF  +  ACSH+G +++   +F QM + Y   P   HYA
Sbjct: 456 GNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYA 515

Query: 504 CYIDLLARAGCVEDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARYVSKKLVEVDPE 563
           C +D+L R+G +E A++ +  MP  P+  VW +LL  C +H+   LA     +L+E++P 
Sbjct: 516 CIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPR 575

Query: 564 SSAGYVMQANSFATDLQWDDVSALRWFMREKGVHKQPGRSWISIDGTVHEFFSATKSHPC 591
           +   +V+ +N +A   +W++VS LR  MR  G+ K+PG S I IDG +HEF S   +HP 
Sbjct: 576 NDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPM 631

[Close]
BLAST of CmoCh19G005800 vs. TAIR10
Match: AT1G08070.1 (AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 310.8 bits (795), Expect = 3.2e-84
Identity = 174/469 (37.10%), Postives = 272/469 (58.00%), Query Frame = 1 

Query: 120 KAFHRSSHSPNVKQVHTHVMKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREM 179
           K F +S H   V   +T ++K GY    +I NA                 +FDE+  +++
Sbjct: 190 KVFDKSPHRDVVS--YTALIK-GYASRGYIENA---------------QKLFDEIPVKDV 249

Query: 180 ACCWTSLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEK---- 239
              W ++I+GYA  G  ++AL LF  M+K N++P++ TMV+V+SAC++    E+ +    
Sbjct: 250 VS-WNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHL 309

Query: 240 WVAELTQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYF 299
           W+ +     + F S    +N  L+ LY K G++E +   F E +  +  I WN++I  Y 
Sbjct: 310 WIDD-----HGFGSNLKIVN-ALIDLYSKCGELETACGLF-ERLPYKDVISWNTLIGGYT 369

Query: 300 QNGCPVEALTLFRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHGGRRGII 359
                 EAL LF+ ML +    PN VTM+++L ACA +G + +GR +H  ++   R   +
Sbjct: 370 HMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYIDK--RLKGV 429

Query: 360 ASNKMLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQ 419
            +   L T+LIDMY K G +E A QVF+ ++ K + S+NAMI G A++G+AD +  LFS+
Sbjct: 430 TNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSR 489

Query: 420 MQESDIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAG 479
           M++  I+P   TF+GLLSACSHSG L+ GR IF  M   Y  +P L+HY C IDLL  +G
Sbjct: 490 MRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSG 549

Query: 480 CVEDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARYVSKKLVEVDPESSAGYVMQAN 539
             ++A E+++ M  EP+  +W SLL+ C +H   EL    ++ L++++PE+   YV+ +N
Sbjct: 550 LFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSN 609

Query: 540 SFATDLQWDDVSALRWFMREKGVHKQPGRSWISIDGTVHEFFSATKSHP 585
            +A+  +W++V+  R  + +KG+ K PG S I ID  VHEF    K HP
Sbjct: 610 IYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHP 629

[Close]
BLAST of CmoCh19G005800 vs. NCBI nr
Match: gi|659110039|ref|XP_008455016.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like isoform X1 [Cucumis melo])

HSP 1 Score: 1035.4 bits (2676), Expect = 7.0e-299
Identity = 508/593 (85.67%), Postives = 547/593 (92.24%), Query Frame = 1 

Query: 1   MVNGKSYAMRSSCINLEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY 60
           M+N KSYAMR   +N EFINLSDLLQGRIN+S LRQIH RVFRLLKHQDNLIATRLIGHY
Sbjct: 1   MINIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHY 60

Query: 61  PYSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
           P+SVG+RVFNQL+RPNIFPCNAIIRVLAE N SFLA SIFKSLK LSLSPNDFTFSFLLK
Sbjct: 61  PHSVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLK 120

Query: 121 AFHRSSHSPNVKQVHTHVMKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMA 180
           AFHRS ++ +VKQVHTHV+KMGY GDSFISNALLGVYARGLKDM SAH +FDEMS+REMA
Sbjct: 121 AFHRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMA 180

Query: 181 CCWTSLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL 240
           CCWTSLIAGYA MGLAEKA+L+FV MIKEN+QPEDDTMVSVLSACSK QIAEIEKWV  L
Sbjct: 181 CCWTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVAL 240

Query: 241 TQLVNEFDS---CCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQN 300
            +LVN+FDS   CCDSINIVL+YLYGKWG +EKSEEKFNEI+DK+S +VWNSMINAYFQN
Sbjct: 241 RELVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQN 300

Query: 301 GCPVEALTLFRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHGGRRGIIAS 360
           G PVEALTLFRLM+ENPHCKPNHVTMVTV+SACAQIGDLQLG  VHE L+  GR+GIIAS
Sbjct: 301 GFPVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIAS 360

Query: 361 NKMLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQ 420
           NKMLATALIDMYCK GSLE+AK+VFH+LI KDVISFNAMIMGLAVNGK DEALKLF+QMQ
Sbjct: 361 NKMLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQ 420

Query: 421 ESDIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCV 480
           E DI+P+TGTFIGLLSACSHSGFLEQG QIFI+M T+Y  SPSL+HYACYIDLLARAG  
Sbjct: 421 EIDIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRF 480

Query: 481 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARYVSKKLVEVDPESSAGYVMQANSF 540
           EDALEVVSTMPFEPNNFVWSSLLRGCLLHS FELA+YVSKKLVEVDPE+SAGYVMQANSF
Sbjct: 481 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSF 540

Query: 541 ATDLQWDDVSALRWFMREKGVHKQPGRSWISIDGTVHEFFSATKSHPCVDLLY 591
           A+D QWDDVSALRWFMREKGVHKQPG+SWISIDGTVHEFFSATKSHP VDLLY
Sbjct: 541 ASDRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLY 593

[Close]
BLAST of CmoCh19G005800 vs. NCBI nr
Match: gi|700188636|gb|KGN43869.1| (hypothetical protein Csa_7G071580 [Cucumis sativus])

HSP 1 Score: 1025.4 bits (2650), Expect = 7.3e-296
Identity = 501/585 (85.64%), Postives = 541/585 (92.48%), Query Frame = 1 

Query: 9   MRSSCINLEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHYPYSVGIRV 68
           MR  C+N EFI+LSDLLQGRIN+S LRQIH RVFRLLKHQDNLIATRLIGHYP+SVG+RV
Sbjct: 1   MRCLCVNPEFISLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRV 60

Query: 69  FNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHS 128
           FNQL+RPNIFPCNAIIRVLAE N SF A SIFK LK LSLSPNDFTFSFLLKAFHRS ++
Sbjct: 61  FNQLIRPNIFPCNAIIRVLAEHNSSFFALSIFKYLKHLSLSPNDFTFSFLLKAFHRSCNA 120

Query: 129 PNVKQVHTHVMKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMACCWTSLIA 188
            NVKQVHTHV+KMGY GDSFISN+LLGVYARGLK+M SAH +FDEMS+REMACCWTSLIA
Sbjct: 121 LNVKQVHTHVLKMGYFGDSFISNSLLGVYARGLKEMASAHKLFDEMSDREMACCWTSLIA 180

Query: 189 GYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAELTQLVNEFD 248
           GYA MGLAEKA+LLF MM+KENIQPEDDT+VSVLSACSKLQIAEIEKWV EL QLVN+ D
Sbjct: 181 GYAQMGLAEKAMLLFFMMVKENIQPEDDTIVSVLSACSKLQIAEIEKWVVELRQLVNKCD 240

Query: 249 S---CCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCPVEALT 308
           S   CCDSINIVL+YLYGKWG +EKSEEKFNE+VDKRS +VWNSMINAYFQNG PVEALT
Sbjct: 241 SKRSCCDSINIVLIYLYGKWGMVEKSEEKFNEVVDKRSVLVWNSMINAYFQNGFPVEALT 300

Query: 309 LFRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHGGRRGIIASNKMLATAL 368
           LFRLM+ENPHCKPNHVTMVTV+SACAQIGDLQLG  VHE L+ GGR+GIIASNKMLAT+L
Sbjct: 301 LFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRGGRKGIIASNKMLATSL 360

Query: 369 IDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTT 428
           IDMYCK GSLE+AK+VFH+LI KDVI+FNAMIMGLAVN K DEALKLF+QMQE +I P+T
Sbjct: 361 IDMYCKCGSLERAKEVFHQLINKDVITFNAMIMGLAVNSKGDEALKLFAQMQEINIIPST 420

Query: 429 GTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDALEVVS 488
           GTFIGLLSACSHSGFLEQGRQIFI+M T Y  SPSL+HYACYIDLLARAG  +DALEV+S
Sbjct: 421 GTFIGLLSACSHSGFLEQGRQIFIEMTTHYLVSPSLEHYACYIDLLARAGHFDDALEVIS 480

Query: 489 TMPFEPNNFVWSSLLRGCLLHSRFELARYVSKKLVEVDPESSAGYVMQANSFATDLQWDD 548
           TMPFEPNNFVWSSLLRGCLLHSRFELA+YVSKKLVEVDPE+SAGYVMQANSFATDLQWDD
Sbjct: 481 TMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDD 540

Query: 549 VSALRWFMREKGVHKQPGRSWISIDGTVHEFFSATKSHPCVDLLY 591
           VSALRWFMREKGVHKQPG+SWISIDGTVHEFFSATKSHP VDLLY
Sbjct: 541 VSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLY 585

[Close]
BLAST of CmoCh19G005800 vs. NCBI nr
Match: gi|778724922|ref|XP_011658883.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g08820 [Cucumis sativus])

HSP 1 Score: 810.1 bits (2091), Expect = 4.8e-231
Identity = 391/453 (86.31%), Postives = 422/453 (93.16%), Query Frame = 1 

Query: 141 MGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMACCWTSLIAGYAHMGLAEKAL 200
           MGY GDSFISN+LLGVYARGLK+M SAH +FDEMS+REMACCWTSLIAGYA MGLAEKA+
Sbjct: 1   MGYFGDSFISNSLLGVYARGLKEMASAHKLFDEMSDREMACCWTSLIAGYAQMGLAEKAM 60

Query: 201 LLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAELTQLVNEFDS---CCDSINIV 260
           LLF MM+KENIQPEDDT+VSVLSACSKLQIAEIEKWV EL QLVN+ DS   CCDSINIV
Sbjct: 61  LLFFMMVKENIQPEDDTIVSVLSACSKLQIAEIEKWVVELRQLVNKCDSKRSCCDSINIV 120

Query: 261 LVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCPVEALTLFRLMLENPHCK 320
           L+YLYGKWG +EKSEEKFNE+VDKRS +VWNSMINAYFQNG PVEALTLFRLM+ENPHCK
Sbjct: 121 LIYLYGKWGMVEKSEEKFNEVVDKRSVLVWNSMINAYFQNGFPVEALTLFRLMVENPHCK 180

Query: 321 PNHVTMVTVLSACAQIGDLQLGRRVHEALEHGGRRGIIASNKMLATALIDMYCKSGSLEK 380
           PNHVTMVTV+SACAQIGDLQLG  VHE L+ GGR+GIIASNKMLAT+LIDMYCK GSLE+
Sbjct: 181 PNHVTMVTVISACAQIGDLQLGSWVHEVLQRGGRKGIIASNKMLATSLIDMYCKCGSLER 240

Query: 381 AKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTTGTFIGLLSACSH 440
           AK+VFH+LI KDVI+FNAMIMGLAVN K DEALKLF+QMQE +I P+TGTFIGLLSACSH
Sbjct: 241 AKEVFHQLINKDVITFNAMIMGLAVNSKGDEALKLFAQMQEINIIPSTGTFIGLLSACSH 300

Query: 441 SGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDALEVVSTMPFEPNNFVWS 500
           SGFLEQGRQIFI+M T Y  SPSL+HYACYIDLLARAG  +DALEV+STMPFEPNNFVWS
Sbjct: 301 SGFLEQGRQIFIEMTTHYLVSPSLEHYACYIDLLARAGHFDDALEVISTMPFEPNNFVWS 360

Query: 501 SLLRGCLLHSRFELARYVSKKLVEVDPESSAGYVMQANSFATDLQWDDVSALRWFMREKG 560
           SLLRGCLLHSRFELA+YVSKKLVEVDPE+SAGYVMQANSFATDLQWDDVSALRWFMREKG
Sbjct: 361 SLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDDVSALRWFMREKG 420

Query: 561 VHKQPGRSWISIDGTVHEFFSATKSHPCVDLLY 591
           VHKQPG+SWISIDGTVHEFFSATKSHP VDLLY
Sbjct: 421 VHKQPGQSWISIDGTVHEFFSATKSHPYVDLLY 453

[Close]
BLAST of CmoCh19G005800 vs. NCBI nr
Match: gi|659110041|ref|XP_008455017.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like isoform X2 [Cucumis melo])

HSP 1 Score: 808.5 bits (2087), Expect = 1.4e-230
Identity = 391/453 (86.31%), Postives = 420/453 (92.72%), Query Frame = 1 

Query: 141 MGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMACCWTSLIAGYAHMGLAEKAL 200
           MGY GDSFISNALLGVYARGLKDM SAH +FDEMS+REMACCWTSLIAGYA MGLAEKA+
Sbjct: 1   MGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMACCWTSLIAGYAQMGLAEKAM 60

Query: 201 LLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAELTQLVNEFDS---CCDSINIV 260
           L+FV MIKEN+QPEDDTMVSVLSACSK QIAEIEKWV  L +LVN+FDS   CCDSINIV
Sbjct: 61  LIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVALRELVNKFDSKSSCCDSINIV 120

Query: 261 LVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCPVEALTLFRLMLENPHCK 320
           L+YLYGKWG +EKSEEKFNEI+DK+S +VWNSMINAYFQNG PVEALTLFRLM+ENPHCK
Sbjct: 121 LIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQNGFPVEALTLFRLMVENPHCK 180

Query: 321 PNHVTMVTVLSACAQIGDLQLGRRVHEALEHGGRRGIIASNKMLATALIDMYCKSGSLEK 380
           PNHVTMVTV+SACAQIGDLQLG  VHE L+  GR+GIIASNKMLATALIDMYCK GSLE+
Sbjct: 181 PNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIASNKMLATALIDMYCKCGSLER 240

Query: 381 AKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTTGTFIGLLSACSH 440
           AK+VFH+LI KDVISFNAMIMGLAVNGK DEALKLF+QMQE DI+P+TGTFIGLLSACSH
Sbjct: 241 AKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEIDIRPSTGTFIGLLSACSH 300

Query: 441 SGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDALEVVSTMPFEPNNFVWS 500
           SGFLEQG QIFI+M T+Y  SPSL+HYACYIDLLARAG  EDALEVVSTMPFEPNNFVWS
Sbjct: 301 SGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRFEDALEVVSTMPFEPNNFVWS 360

Query: 501 SLLRGCLLHSRFELARYVSKKLVEVDPESSAGYVMQANSFATDLQWDDVSALRWFMREKG 560
           SLLRGCLLHS FELA+YVSKKLVEVDPE+SAGYVMQANSFA+D QWDDVSALRWFMREKG
Sbjct: 361 SLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSFASDRQWDDVSALRWFMREKG 420

Query: 561 VHKQPGRSWISIDGTVHEFFSATKSHPCVDLLY 591
           VHKQPG+SWISIDGTVHEFFSATKSHP VDLLY
Sbjct: 421 VHKQPGQSWISIDGTVHEFFSATKSHPYVDLLY 453

[Close]
BLAST of CmoCh19G005800 vs. NCBI nr
Match: gi|645261674|ref|XP_008236408.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Prunus mume])

HSP 1 Score: 750.7 bits (1937), Expect = 3.5e-213
Identity = 363/576 (63.02%), Postives = 459/576 (79.69%), Query Frame = 1 

Query: 20  NLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHYPYSVGIRVFNQLLRPNIFP 79
           +L+  LQGRI+  RL QIH +VF++   QDNLIATRLIGHYP  + +RVF+QL +PNIFP
Sbjct: 40  DLAASLQGRISYPRLLQIHAQVFQVGAQQDNLIATRLIGHYPSHLALRVFHQLQKPNIFP 99

Query: 80  CNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQVHTHVM 139
            NAIIRV AE      AFS+FK LK+ SLSPNDFTFSFLLKA  RS +S  VKQ+HTHV 
Sbjct: 100 FNAIIRVFAEEGLFSDAFSLFKILKQTSLSPNDFTFSFLLKACFRSENSRYVKQIHTHVT 159

Query: 140 KMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMACCWTSLIAGYAHMGLAEKA 199
           K+G+L +SF+  +LL VYA+GLKD+GSAH +FDEM E+ + CCWTSLIAGYA  G +E+ 
Sbjct: 160 KVGFLCNSFVCASLLAVYAKGLKDLGSAHLVFDEMPEKSIVCCWTSLIAGYARSGQSEQV 219

Query: 200 LLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAELTQLVNEFDSC---CDSINI 259
           L LF+MM+ EN++PEDDTMVSVLSACS L I ++EKWV  L+++V+  D+    CDS+N 
Sbjct: 220 LRLFLMMVDENLRPEDDTMVSVLSACSNLDIVDVEKWVTILSEVVSNVDAKKFGCDSVNT 279

Query: 260 VLVYLYGKWGKIEKSEEKFNEIVD--KRSAIVWNSMINAYFQNGCPVEALTLFRLMLENP 319
            LVYLYGKWGK+EKS ++F++I D  K+S + WN+MI A+ QNG P+E+L+LFR+M+E+P
Sbjct: 280 ALVYLYGKWGKVEKSRDQFDQISDNGKQSVLPWNAMIGAFVQNGFPMESLSLFRVMVEDP 339

Query: 320 HCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHGGRRGIIASNKMLATALIDMYCKSGS 379
             +PNHVTMV+VLSACAQIGDL LGR VHE L+  G +G+I SN++LATALIDMY K GS
Sbjct: 340 KYRPNHVTMVSVLSACAQIGDLDLGRWVHEYLKSKGSKGVIGSNRILATALIDMYSKCGS 399

Query: 380 LEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTTGTFIGLLSA 439
           LE+AK+VF +++ KD++SFNAMIMGLAVN + +EAL+LFS++Q+  ++P  GTF+G L A
Sbjct: 400 LERAKEVFDQMVSKDIVSFNAMIMGLAVNSEGEEALRLFSRIQKFGLQPNAGTFLGALCA 459

Query: 440 CSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDALEVVSTMPFEPNNF 499
           CSHSG  E+GRQIF  M + +S SP L+HYACYIDLLAR G VE+ALEVV++MPFEPN+F
Sbjct: 460 CSHSGLSEEGRQIFNDMTSSFSVSPKLEHYACYIDLLARVGLVEEALEVVTSMPFEPNSF 519

Query: 500 VWSSLLRGCLLHSRFELARYVSKKLVEVDPESSAGYVMQANSFATDLQWDDVSALRWFMR 559
           VW +LL GCLLHSR +LA+YVS KLV  DP++S GY+M AN+FA+D +W DVS LRWFMR
Sbjct: 520 VWGALLGGCLLHSRVDLAQYVSNKLVRSDPDNSGGYIMLANAFASDRRWGDVSVLRWFMR 579

Query: 560 EKGVHKQPGRSWISIDGTVHEFFSATKSHPCVDLLY 591
           EKGV KQPG SWISIDG VHEF     SHP ++ +Y
Sbjct: 580 EKGVTKQPGFSWISIDGVVHEFLVGCPSHPQIESIY 615

The following BLAST results are available for this feature:
BLAST of CmoCh19G005800 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP224_ARATH4.8e-9034.21Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN... [more]
PP261_ARATH8.2e-9033.28Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana GN... [more]
PP219_ARATH3.1e-8933.33Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis th... [more]
PP175_ARATH7.7e-8832.73Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
PPR21_ARATH5.7e-8337.10Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
BLAST of CmoCh19G005800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K4I3_CUCSA5.1e-29685.64Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071580 PE=4 SV=1[more]
M5W238_PRUPE3.5e-21263.62Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021613mg PE=4 SV=1[more]
A0A061E036_THECC7.0e-20560.85Pentatricopeptide repeat-containing protein OS=Theobroma cacao GN=TCM_007174 PE=... [more]
F6H681_VITVI7.8e-20460.66Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g00370 PE=4 SV=... [more]
A0A067LJI3_JATCU3.3e-20259.83Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16282 PE=4 SV=1[more]
BLAST of CmoCh19G005800 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G12770.12.7e-9134.21 mitochondrial editing factor 22[more]
AT3G29230.14.6e-9133.28 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G08820.11.8e-9033.33 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G29760.14.3e-8932.73 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G08070.13.2e-8437.10 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of CmoCh19G005800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110039|ref|XP_008455016.1|7.0e-29985.67PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like isoform X1... [more]
gi|700188636|gb|KGN43869.1|7.3e-29685.64hypothetical protein Csa_7G071580 [Cucumis sativus][more]
gi|778724922|ref|XP_011658883.1|4.8e-23186.31PREDICTED: putative pentatricopeptide repeat-containing protein At3g08820 [Cucum... [more]
gi|659110041|ref|XP_008455017.1|1.4e-23086.31PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like isoform X2... [more]
gi|645261674|ref|XP_008236408.1|3.5e-21363.02PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Prunus mu... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR004367Cyclin_C-dom
IPR006671Cyclin_N
IPR011990TPR-like_helical_dom_sf
IPR013763Cyclin-like
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006334 nucleosome assembly
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
cellular_component GO:0000786 nucleosome
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh19G005800.1CmoCh19G005800.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 182..211
score: 1.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 284..331
score: 2.8E-8coord: 388..436
score: 5.4E-11coord: 75..123
score: 2.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 182..213
score: 3.3E-5coord: 363..389
score: 5.4E-5coord: 285..319
score: 2.4E-8coord: 391..424
score: 6.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 283..313
score: 9.58coord: 111..145
score: 5.996coord: 460..490
score: 6.401coord: 492..526
score: 6.588coord: 358..388
score: 8.517coord: 76..110
score: 7.476coord: 389..423
score: 12.781coord: 179..213
score: 9.493coord: 146..177
score: 7.41coord: 319..353
score: 6.829coord: 424..454
score: 6
IPR004367Cyclin, C-terminal domainSMARTSM01332Cyclin_C_2coord: 941..1063
score: 2.3
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 873..968
score: 3.4
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 259..524
score: 4.
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 355..527
score: 1.
IPR013763Cyclin-likeGENE3DG3DSA:1.10.472.10coord: 964..1067
score: 3.1E-33coord: 876..963
score: 4.5
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 969..1032
score: 0.01coord: 884..968
score: 6.0
IPR013763Cyclin-likeunknownSSF47954Cyclin-likecoord: 851..968
score: 4.19E-34coord: 958..1064
score: 4.25
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 30..567
score: 1.3E
NoneNo IPR availablePANTHERPTHR24015:SF514SUBFAMILY NOT NAMEDcoord: 30..567
score: 1.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh19G005800Cucsa.219330Cucumber (Gy14) v1cgycmoB0627
CmoCh19G005800CmaCh19G005650Cucurbita maxima (Rimu)cmacmoB508
CmoCh19G005800Cla016075Watermelon (97103) v1cmowmB496
CmoCh19G005800Csa7G071580Cucumber (Chinese Long) v2cmocuB519
CmoCh19G005800MELO3C018501Melon (DHL92) v3.5.1cmomeB454
CmoCh19G005800ClCG02G006570Watermelon (Charleston Gray)cmowcgB459
CmoCh19G005800CSPI07G07050Wild cucumber (PI 183967)cmocpiB525
CmoCh19G005800Lsi03G005540Bottle gourd (USVL1VR-Ls)cmolsiB468
CmoCh19G005800Cp4.1LG15g04500Cucurbita pepo (Zucchini)cmocpeB481
CmoCh19G005800Cp4.1LG04g07790Cucurbita pepo (Zucchini)cmocpeB494
CmoCh19G005800MELO3C018501.2Melon (DHL92) v3.6.1cmomedB523
CmoCh19G005800CsaV3_7G008020Cucumber (Chinese Long) v3cmocucB0623
CmoCh19G005800Cla97C02G033560Watermelon (97103) v2cmowmbB512
CmoCh19G005800Bhi05G000913Wax gourdcmowgoB0642
CmoCh19G005800CsGy7G006630Cucumber (Gy14) v2cgybcmoB928
CmoCh19G005800Carg16347Silver-seed gourdcarcmoB0615
CmoCh19G005800Carg26990Silver-seed gourdcarcmoB0268
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh19G005800CmoCh11G013990Cucurbita moschata (Rifu)cmocmoB110
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh19G005800Bottle gourd (USVL1VR-Ls)cmolsiB469
CmoCh19G005800Bottle gourd (USVL1VR-Ls)cmolsiB482
CmoCh19G005800Cucumber (Gy14) v2cgybcmoB492
CmoCh19G005800Melon (DHL92) v3.6.1cmomedB526
CmoCh19G005800Melon (DHL92) v3.6.1cmomedB549
CmoCh19G005800Silver-seed gourdcarcmoB0512
CmoCh19G005800Cucumber (Chinese Long) v3cmocucB0611
CmoCh19G005800Watermelon (97103) v2cmowmbB519
CmoCh19G005800Wax gourdcmowgoB0670
CmoCh19G005800Cucurbita moschata (Rifu)cmocmoB395
CmoCh19G005800Cucurbita maxima (Rimu)cmacmoB718
CmoCh19G005800Cucurbita maxima (Rimu)cmacmoB143