Lsi03G005540 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi03G005540
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionCyclin A, putative
Locationchr03 : 6711122 .. 6714750 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGATTTGAAATTCATGAAAATGGCGGCATTTCTCCCTCCTCTTCTTCTCTATTTCACCACCAACTCCATTCTTCCACCAATGGATTCTCCGAGATTCTCCTCCCCCTCCTCCGCTTGTCTTCTCCGGCAAACTCGGCAACTTCCACATTCTCTCTCCGCCGTTCGTAATCGGATTCTTTCCGTCTCCCATGGACCCGCCGGAGTACCACAAGCCATCCGTCCGAACGTCGAAGAAGCGCGACTCGGAGGTGCACTCTTTGCAACAGGCCACTGCCAACAAGAGACCCGCGCTTGGCGAGATCACTAACTCATTGATCTTCAGTTCTAGCCAATGCTCCTTTTCTGATCAGGAGATGACGGATAAGGATCTGGACATGGAGGAACTCCCTGAAGGAAGGTCTGTTGATTGTTCGGAGAAATCTGGCTCTGCATTTAGTATTTATAACCACCTTCGATCTCTGGAGGTATGGATTTCGACTTCTTTGTCTTGATTTTTTTTTAGATATCGGTTTGGCTAGTTCCCTGTGCTCGAGATATTGCGTGCAGTGAGGTTGTTAAATGAACTGAGGATTGCGATACCTTTACTCTCTCTTGGTTTTAGGTATTGGTTTGGCAAGTTCTCTGTGGTTGAGAGATATTGTGTGTAGTGAGTGCTTATATGAACTGAACATTACGATGTCTTTTCTTTGGTTTGATTTTAGATATCGGTTTAGCGAGGTCTCTGAGATCGAGATCTTGTGTGTAGTGAAGTGGTCATATGAACTGACGATTGCGATACCTTTTCTTCGTGCAGTTTAATAGTTTCATCGTCATCTTGTTCATTTACGATTATACTAATTATAGAGAATTCGAGGTTCCTTGCTACTGATATTTGTTTAATTTTTCTACAATTGTTGTTTCTGCGATTTGTCTTGGAGGAATTTATTATAGCGCAGGGGAGGTTCTATCTGGAATATATTGTTTGGATATGGATTAATGTCTCGATAACACAATTTTCTCGGTCAATTTATTTCTTCGGATTGGAATATTTTACTAAAATGCATTTATACTCACAAATATATGTACAAGTAAAGTTTGCAAGTTCGAATTCCTGCCTGCTAGTTTCCTCATCTTTCAACACGTTCAAGCAAACCAATGCCAATCTCATTCCCATGATTTTATGAAAATAATAATCTTCAAGTTTAATAGTTCAACTTCAACATATTTGATCCAACTAGTTATTTCCTTGCGTGAACCAGATGGAATTACACATGAAGTTACTACCCAACAACATTGAAAAGGCTCTCAATGGTGATTCCAGTTTAACTTTCACTCGTGTTCGAGAAATTCTAGTGGATTGGTTAGTAGAGGTTGCTGAGGAATACAAGCTTGTATCGGACACCCTATATCTCACCATATCACATATTGACAGATACTTATCCTGGCATGCTATTGACAGAAGCAAGCTACAACTTCTTGGCGTTTGTTGCATGCTAATTGCATCGTATTTACTAAGAACCCACTTGTTTTATTTGGTAATATTTATGGTTTTAGTTACAAAATCTCATTGCTATATTATTGATTGGTGCTGCAGGAAGCATGAAGAGATCAGTCCTCCACATGCTGAAGACTTCTGCTATATAACAGATAATACTTATACCAAAGAACAGGTGCTCAATTAGTCCTTTCCATGCTTAAGCATTGCTTTCTCTTCTAATATTTTGACGCTATAAACATGTTGCATTCTCGTCTTCCCTGACATGTTTACAGCAGAAGGAAGAAAATCTCCATATGGTTTATGAGTTATAAATATCATTGCTAGTATTTATGTCCCTTTTTTATTTTGTTATTCATAATTGTTTTTCAAAACATAGTTATTGACATCAATATCTTGTCTTATCAACATTTTTAGAAAATTGAGACATCAACTTTAATCCTTTTGCATACCCCTTTTTAGTTAATGAAACTTAGCTGTTAATTTTGGTTCATATGCGAAAAGATACTAATTCCATGGCAACTGATTAAGGATTTTATCTGGTTTTGTTTAATATGCAGGTACTGAATATGGAGAGAGAAGTACGCACATTCTTGACCTGTGAAGGCGCCCCCACGGTAAAAGTTTTCCTCAGGTAAGAATGCTTTTCAACTATCGTGCATTGAGTTCCTACAAACCGATATTTCCCATTTTCACAATAAGGGATTAACTCATTGTTGCCACCTTACAGGATATTTACAAAAGTTGCTTTAGAAAATTGGAAGGTAAGCCCCATTCTCGACATTTTCCCATTTTTATTCTTCCTCTCATTATTGATTCTAAAAACTTACCTCTATCATCAGGCTCCAGATTTGCAATTTGAGATATTGAGTTGTTATCTTGCGGAGCTAAGTTTGTTAGATCACCGTTGTGTACAAATCTTACCTTCAAAAGTCGCGGCATCAGCCATTTTTCTTTCTAGATTCACAATCCAACCAGAGAAACATCCTTGGGTAAGTGATATGTTTGCAACTCTTTTAGTAACCAATTTATGACATAGTTTGATAATGTTCTTGTTAACTTCATTAAAATATTATTGGTGTTTTAAGCGATAACAAATTTTGTTGCTTCACCACATTTTGCAGTGTTTAGCACTACAACGTTACTCCGGTTACAGGCCATCTGAACTAAAGGAATGCATTCTTGCCATTCATGACTTGCAATTAAATAGAAAAGGAAGCTCTTTACTAGCAATAAGAGACAAGTACAAGCAGCATAAGGTACCGTGCGTACATATTTCATTAGTTATTTTGCTCAAACTTTTGAATTGTGACCTATATACTAAAAAATATTGAAAAGAATAAACTAACTTTATCAAGTAAAACTCTTAATTTTATTGGCAATTTGATATAGGTATTGATATTGAATCCAAAACTATTTCTAGTTTACATAAATTTACCTTTGCCTAATTAGCTTAAGCTTTTGAGCCAATTGATGATTTAATCTGATATTAGAGCAAGAGGTCCCGTGCTTAGATCCTTGTTATTTCCTCTCCAATTAATATTAATTTTCACTTGTCGAGTATTCTACAATTTCCAAATCTACAAGTGAGGAGTGTAGTGTTGATATAATATTAGACTTACATTCACTATCATGTTAAGCTTTTTGGTTAACCGTTGATTTAACATAAATGAAACAAAAACTGAAGCAAATGAAGAATGTTAAGGGCGAGCATGTATGAAGGGTTAAATACACTTTACAGAAGTTTTCGTTTTCAATAGTGAACTCTAATCATATTTAATGATAAGCATTTTCATTTTTTCAGTTCAAGTGTGTGGCCGAGTTATCTTCTCCCTCAGAAATTCCCGCATATTATTTTGAGGACATTGATCAGCAATTATTCAACAGGTTTTTAAGAACTGCTTAAACTCTTTCTCTTCTCTTGGCTAGCATGACATGCACAGTAACCATGCACAAATAATGAGTACTAGGTACTTGATAGATAGATCATAGAAGAAAATTTTTTTCGTCTATCTCTCTTCATTGTAGCTTCTTTTCTTCATTGTAAGAATGCAATTGAATCATAATTATGAGGGCTTTACTCCCCCTTTCTCTTAGTTCCCATCCAAGAATTGTATAGATCATACATTTGTTTTCAAGGTGAAATTTCTACTAC

mRNA sequence

AGATTTGAAATTCATGAAAATGGCGGCATTTCTCCCTCCTCTTCTTCTCTATTTCACCACCAACTCCATTCTTCCACCAATGGATTCTCCGAGATTCTCCTCCCCCTCCTCCGCTTGTCTTCTCCGGCAAACTCGGCAACTTCCACATTCTCTCTCCGCCGTTCGTAATCGGATTCTTTCCGTCTCCCATGGACCCGCCGGAGTACCACAAGCCATCCGTCCGAACGTCGAAGAAGCGCGACTCGGAGGTGCACTCTTTGCAACAGGCCACTGCCAACAAGAGACCCGCGCTTGGCGAGATCACTAACTCATTGATCTTCAGTTCTAGCCAATGCTCCTTTTCTGATCAGGAGATGACGGATAAGGATCTGGACATGGAGGAACTCCCTGAAGGAAGGTCTGTTGATTGTTCGGAGAAATCTGGCTCTGCATTTAGTATTTATAACCACCTTCGATCTCTGGAGATGGAATTACACATGAAGTTACTACCCAACAACATTGAAAAGGCTCTCAATGGTGATTCCAGTTTAACTTTCACTCGTGTTCGAGAAATTCTAGTGGATTGGTTAGTAGAGGTTGCTGAGGAATACAAGCTTGTATCGGACACCCTATATCTCACCATATCACATATTGACAGATACTTATCCTGGCATGCTATTGACAGAAGCAAGCTACAACTTCTTGGCGTTTGTTGCATGCTAATTGCATCGAAGCATGAAGAGATCAGTCCTCCACATGCTGAAGACTTCTGCTATATAACAGATAATACTTATACCAAAGAACAGGTACTGAATATGGAGAGAGAAGTACGCACATTCTTGACCTGTGAAGGCGCCCCCACGGTAAAAGTTTTCCTCAGGATATTTACAAAAGTTGCTTTAGAAAATTGGAAGGCTCCAGATTTGCAATTTGAGATATTGAGTTGTTATCTTGCGGAGCTAAGTTTGTTAGATCACCGTTGTGTACAAATCTTACCTTCAAAAGTCGCGGCATCAGCCATTTTTCTTTCTAGATTCACAATCCAACCAGAGAAACATCCTTGGTGTTTAGCACTACAACGTTACTCCGGTTACAGGCCATCTGAACTAAAGGAATGCATTCTTGCCATTCATGACTTGCAATTAAATAGAAAAGGAAGCTCTTTACTAGCAATAAGAGACAAGTACAAGCAGCATAAGTTCAAGTGTGTGGCCGAGTTATCTTCTCCCTCAGAAATTCCCGCATATTATTTTGAGGACATTGATCAGCAATTATTCAACAGGTTTTTAAGAACTGCTTAAACTCTTTCTCTTCTCTTGGCTAGCATGACATGCACAGTAACCATGCACAAATAATGAGTACTAGGTACTTGATAGATAGATCATAGAAGAAAATTTTTTTCGTCTATCTCTCTTCATTGTAGCTTCTTTTCTTCATTGTAAGAATGCAATTGAATCATAATTATGAGGGCTTTACTCCCCCTTTCTCTTAGTTCCCATCCAAGAATTGTATAGATCATACATTTGTTTTCAAGGTGAAATTTCTACTAC

Coding sequence (CDS)

ATGGACCCGCCGGAGTACCACAAGCCATCCGTCCGAACGTCGAAGAAGCGCGACTCGGAGGTGCACTCTTTGCAACAGGCCACTGCCAACAAGAGACCCGCGCTTGGCGAGATCACTAACTCATTGATCTTCAGTTCTAGCCAATGCTCCTTTTCTGATCAGGAGATGACGGATAAGGATCTGGACATGGAGGAACTCCCTGAAGGAAGGTCTGTTGATTGTTCGGAGAAATCTGGCTCTGCATTTAGTATTTATAACCACCTTCGATCTCTGGAGATGGAATTACACATGAAGTTACTACCCAACAACATTGAAAAGGCTCTCAATGGTGATTCCAGTTTAACTTTCACTCGTGTTCGAGAAATTCTAGTGGATTGGTTAGTAGAGGTTGCTGAGGAATACAAGCTTGTATCGGACACCCTATATCTCACCATATCACATATTGACAGATACTTATCCTGGCATGCTATTGACAGAAGCAAGCTACAACTTCTTGGCGTTTGTTGCATGCTAATTGCATCGAAGCATGAAGAGATCAGTCCTCCACATGCTGAAGACTTCTGCTATATAACAGATAATACTTATACCAAAGAACAGGTACTGAATATGGAGAGAGAAGTACGCACATTCTTGACCTGTGAAGGCGCCCCCACGGTAAAAGTTTTCCTCAGGATATTTACAAAAGTTGCTTTAGAAAATTGGAAGGCTCCAGATTTGCAATTTGAGATATTGAGTTGTTATCTTGCGGAGCTAAGTTTGTTAGATCACCGTTGTGTACAAATCTTACCTTCAAAAGTCGCGGCATCAGCCATTTTTCTTTCTAGATTCACAATCCAACCAGAGAAACATCCTTGGTGTTTAGCACTACAACGTTACTCCGGTTACAGGCCATCTGAACTAAAGGAATGCATTCTTGCCATTCATGACTTGCAATTAAATAGAAAAGGAAGCTCTTTACTAGCAATAAGAGACAAGTACAAGCAGCATAAGTTCAAGTGTGTGGCCGAGTTATCTTCTCCCTCAGAAATTCCCGCATATTATTTTGAGGACATTGATCAGCAATTATTCAACAGGTTTTTAAGAACTGCTTAA

Protein sequence

MDPPEYHKPSVRTSKKRDSEVHSLQQATANKRPALGEITNSLIFSSSQCSFSDQEMTDKDLDMEELPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVREILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEISPPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCEGAPTVKVFLRIFTKVALENWKAPDLQFEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSELKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDIDQQLFNRFLRTA
Homology
[Close]
BLAST of Lsi03G005540 vs. Swiss-Prot
Match: CCA31_ORYSJ (Cyclin-A3-1 OS=Oryza sativa subsp. japonica GN=CYCA3-1 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.4e-81
Identity = 163/294 (55.44%), Postives = 211/294 (71.77%), Query Frame = 1 

Query: 61  LDMEELPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVR 120
           +D +E  EG    C+     A  I ++LRS+E++   +   + IE      ++     +R
Sbjct: 87  VDDDEEGEGDPQLCAPY---ASDINSYLRSMEVQAKRRPAADYIETVQVDVTA----NMR 146

Query: 121 EILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEIS 180
            ILVDWLVEVAEEYKLVSDTLYLT+S+IDR+LS  +I+R KLQLLGV  MLIASK+EEIS
Sbjct: 147 GILVDWLVEVAEEYKLVSDTLYLTVSYIDRFLSAKSINRQKLQLLGVSAMLIASKYEEIS 206

Query: 181 PPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCE-GAPTVKVFLRIFTKVALENWKAPDL 240
           PP+ EDFCYITDNTY K++V+ MER++   L  E G PT K FLR+F + + E+ K P L
Sbjct: 207 PPNVEDFCYITDNTYMKQEVVKMERDILNVLKFEMGNPTTKTFLRMFIRSSQEDDKYPSL 266

Query: 241 QFEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSE 300
             E +  YLAELSLL++ CV++LPS VAAS +F++R T+  + +PW   LQ  +GYR SE
Sbjct: 267 PLEFMCSYLAELSLLEYGCVRLLPSVVAASVVFVARLTLDSDTNPWSKKLQEVTGYRASE 326

Query: 301 LKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDIDQ 354
           LK+CI  IHDLQLNRKGSSL+AIRDKYKQH+FK V+ L  P EIPA YFED+++
Sbjct: 327 LKDCITCIHDLQLNRKGSSLMAIRDKYKQHRFKGVSTLLPPVEIPASYFEDLNE 373

[Close]
BLAST of Lsi03G005540 vs. Swiss-Prot
Match: CCA32_ORYSJ (Cyclin-A3-2 OS=Oryza sativa subsp. japonica GN=CYCA3-2 PE=2 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 7.5e-80
Identity = 152/274 (55.47%), Postives = 200/274 (72.99%), Query Frame = 1 

Query: 81  AFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVREILVDWLVEVAEEYKLVSDT 140
           A  IY +LRS+E+E   +   + IE A+  D +     +R ILVDWLVEVA+EYKLV+DT
Sbjct: 116 ASDIYTYLRSMEVEARRQSAADYIE-AVQVDVT---ANMRAILVDWLVEVADEYKLVADT 175

Query: 141 LYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEISPPHAEDFCYITDNTYTKEQV 200
           LYL +S++DRYLS H + R++LQLLGV  MLIA+K+EEISPPH EDFCYITDNTYT+++V
Sbjct: 176 LYLAVSYLDRYLSAHPLRRNRLQLLGVGAMLIAAKYEEISPPHVEDFCYITDNTYTRQEV 235

Query: 201 LNMEREVRTFLTCE-GAPTVKVFLRIFTKVALENWKAPDLQFEILSCYLAELSLLDHRCV 260
           + ME ++   L  E G PT+K FLR FT+   E+ K   L  E +  YLAELSLLD+ C+
Sbjct: 236 VKMESDILKLLEFEMGNPTIKTFLRRFTRSCQEDKKRSSLLLEFMGSYLAELSLLDYGCL 295

Query: 261 QILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSELKECILAIHDLQLNRKGSSL 320
           + LPS VAAS +F+++  I P  +PW   +Q+ +GY+ SELK+CILAIHDLQL +K S+L
Sbjct: 296 RFLPSVVAASVVFVAKLNIDPYTNPWSKKMQKLTGYKVSELKDCILAIHDLQLRKKCSNL 355

Query: 321 LAIRDKYKQHKFKCVAELSSPSEIPAYYFEDIDQ 354
            AIRDKYKQHKFKCV+ L  P +IPA Y +D+ +
Sbjct: 356 TAIRDKYKQHKFKCVSTLLPPVDIPASYLQDLTE 385

[Close]
BLAST of Lsi03G005540 vs. Swiss-Prot
Match: CCA34_ARATH (Cyclin-A3-4 OS=Arabidopsis thaliana GN=CYCA3-4 PE=1 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 3.7e-79
Identity = 170/355 (47.89%), Postives = 237/355 (66.76%), Query Frame = 1 

Query: 14  SKKRDSEVHSLQQATANKRPALGEITN------------SLIFSSSQCSFSDQEMTDKDL 73
           +K++ S +   +   + KR  LGE+ N              + + +  + S ++M  K L
Sbjct: 15  AKRKASSMALDENPVSKKRVVLGELPNMSNVVAVPNQERETLKAKTSVNTSKRQMK-KAL 74

Query: 74  DMEE---LPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTR 133
            + E   L E RSVD       A  I  +LR +E +   + LP+ IEK     S LT   
Sbjct: 75  MIPEASVLIESRSVDPQMCEPFASDICAYLREMEGKPKHRPLPDYIEKV---QSDLT-PH 134

Query: 134 VREILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIAS-KHE 193
           +R +LVDWLVEVAEEYKLVSDTLYLTIS++DR+LS   I+R KLQL+GV  MLIAS K+E
Sbjct: 135 MRAVLVDWLVEVAEEYKLVSDTLYLTISYVDRFLSVKPINRQKLQLVGVSAMLIASRKYE 194

Query: 194 EISPPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCE-GAPTVKVFLRIFTKVALENWKA 253
           EI PP  EDFCYITDNT+TK++V++ME ++   L  E G+PT+K FLR FT+VA E++K 
Sbjct: 195 EIGPPKVEDFCYITDNTFTKQEVVSMEADILLALQFELGSPTIKTFLRRFTRVAQEDFKD 254

Query: 254 PDLQFEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYR 313
             LQ E L CYL+ELS+LD+ CV+ LPS ++ASA+FL+RF I+P++HPW   L+ Y+ Y+
Sbjct: 255 SQLQIEFLCCYLSELSMLDYTCVKYLPSLLSASAVFLARFIIRPKQHPWNQMLEEYTKYK 314

Query: 314 PSELKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDI 352
            ++L+ C+  IHDL L+R+G++L A+R+KYKQHK+KCVA +    E+P  +FEDI
Sbjct: 315 AADLQVCVGIIHDLYLSRRGNTLEAVRNKYKQHKYKCVATMPVSPELPLAFFEDI 364

[Close]
BLAST of Lsi03G005540 vs. Swiss-Prot
Match: CCA32_ARATH (Cyclin-A3-2 OS=Arabidopsis thaliana GN=CYCA3-2 PE=2 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.3e-76
Identity = 144/293 (49.15%), Postives = 206/293 (70.31%), Query Frame = 1 

Query: 60  DLDMEELPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRV 119
           DL+ +   + RS D          IY +LR LE++   + LP+ IEK     +      +
Sbjct: 82  DLESKSDIDSRSDDPQMCGPYVADIYEYLRQLEVKPKQRPLPDYIEKVQKDVTP----SM 141

Query: 120 REILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEI 179
           R +LVDWLVEVAEEYKL S+TLYLT+SHIDR+LS   +++ KLQL+GV  MLIASK+EEI
Sbjct: 142 RGVLVDWLVEVAEEYKLGSETLYLTVSHIDRFLSLKTVNKQKLQLVGVSAMLIASKYEEI 201

Query: 180 SPPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCE-GAPTVKVFLRIFTKVALENWKAPD 239
           SPP  +DFCYITDNT++K+ V+ ME ++   L  E G PT+  F+R FT+VA +++K P 
Sbjct: 202 SPPKVDDFCYITDNTFSKQDVVKMEADILLALQFELGRPTINTFMRRFTRVAQDDFKVPH 261

Query: 240 LQFEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPS 299
           LQ E L CYL+ELS+LD++ V+ +PS +AASA+FL+RF I+P++HPW   L+ Y+ Y+ +
Sbjct: 262 LQLEPLCCYLSELSILDYKTVKFVPSLLAASAVFLARFIIRPKQHPWNQMLEEYTKYKAA 321

Query: 300 ELKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDI 352
           +L+ C+  IHDL L+R+G +L A+R+KYK HKF+CVA +    E+P  ++ED+
Sbjct: 322 DLQVCVGIIHDLYLSRRGGALQAVREKYKHHKFQCVATMPVSPELPVTFWEDV 370

[Close]
BLAST of Lsi03G005540 vs. Swiss-Prot
Match: CCA31_ARATH (Putative cyclin-A3-1 OS=Arabidopsis thaliana GN=CYCA3-1 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 3.0e-76
Identity = 160/345 (46.38%), Postives = 223/345 (64.64%), Query Frame = 1 

Query: 13  TSKKRDSEVHSLQQATANKRPALGEITNSLIFSSSQCSFSDQEMTDKDLDMEELPEG--- 72
           T +K   E    ++    KR  LGE+ N      S+ + + Q+     +   E       
Sbjct: 16  TKRKASMEAAIDKERINKKRVVLGELPNLSNIKKSRKATTKQKKKSVSIPTIETLNSDID 75

Query: 73  -RSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVREILVDWLV 132
            RS D         SI+ +LR LE++   + L + IEK     +S     +R +LVDWLV
Sbjct: 76  TRSDDPQMCGPYVTSIFEYLRQLEVK--SRPLVDYIEKIQKDVTS----NMRGVLVDWLV 135

Query: 133 EVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEISPPHAEDFC 192
           EVAEEYKL+SDTLYL +S+IDR+LS   +++ +LQLLGV  MLIASK+EEI+PP+ +DFC
Sbjct: 136 EVAEEYKLLSDTLYLAVSYIDRFLSLKTVNKQRLQLLGVTSMLIASKYEEITPPNVDDFC 195

Query: 193 YITDNTYTKEQVLNMEREVRTFLTCE-GAPTVKVFLRIFTKVALENWKAPDLQFEILSCY 252
           YITDNTYTK++++ ME ++   L  E G PT   FLR FT+VA E+++   LQ E L  Y
Sbjct: 196 YITDNTYTKQEIVKMEADILLALQFELGNPTSNTFLRRFTRVAQEDFEMSHLQMEFLCSY 255

Query: 253 LAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSELKECILAI 312
           L+ELS+LD++ V+ LPS VAASA+FL+RF I+P++HPW + L+ Y+ Y+  +LKEC+  I
Sbjct: 256 LSELSMLDYQSVKFLPSTVAASAVFLARFIIRPKQHPWNVMLEEYTRYKAGDLKECVAMI 315

Query: 313 HDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDID 353
           HDL L+RK  +L AIR+KYKQHKFKCVA +    E+P   FED++
Sbjct: 316 HDLYLSRKCGALEAIREKYKQHKFKCVATMPVSPELPLTVFEDVN 354

[Close]
BLAST of Lsi03G005540 vs. TrEMBL
Match: A0A0A0K7S8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071600 PE=3 SV=1)

HSP 1 Score: 644.0 bits (1660), Expect = 1.1e-181
Identity = 319/362 (88.12%), Postives = 332/362 (91.71%), Query Frame = 1 

Query: 1   MDPPEYHKPSVRTSKKRDSEVHSLQQATANKRPALGEITNSLIFSSSQCSFSDQEMTDKD 60
           MD  EY+KPS  TSKKRDSE HSLQQATANKRP LGEITNS IFSSSQCSFSDQEM DKD
Sbjct: 82  MDSSEYYKPSFPTSKKRDSEEHSLQQATANKRPVLGEITNSFIFSSSQCSFSDQEMADKD 141

Query: 61  LDMEELPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVR 120
           LD EELPE RSVDC EKSGS+  IYNHLRSLEMEL+MK LPNNIEKA N DS  TFTR R
Sbjct: 142 LDKEELPEVRSVDCPEKSGSSLGIYNHLRSLEMELNMKFLPNNIEKARNDDSCSTFTRWR 201

Query: 121 EILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEIS 180
           EILVDWLVEVAEEYKLVSDTLYLTISH+DRYLSWH +D+SKLQL+GVCCMLIASKHEEIS
Sbjct: 202 EILVDWLVEVAEEYKLVSDTLYLTISHVDRYLSWHVVDKSKLQLIGVCCMLIASKHEEIS 261

Query: 181 PPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCEGAPTVKVFLRIFTKVALENWKAPDLQ 240
           PPH EDFCYITDNTYTKEQVLNMEREV  FL CEGAPTVKVFLRIFTKV+LENWKAPDLQ
Sbjct: 262 PPHVEDFCYITDNTYTKEQVLNMEREVHRFLACEGAPTVKVFLRIFTKVSLENWKAPDLQ 321

Query: 241 FEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSEL 300
           FE+L CYLAELSLLDHRC QILPSKVAASAIFLSRFTIQPE+HPWCLALQRYSGYR SEL
Sbjct: 322 FELLCCYLAELSLLDHRCAQILPSKVAASAIFLSRFTIQPEEHPWCLALQRYSGYRASEL 381

Query: 301 KECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDIDQQLFNRFL 360
           KECILAIHDLQLNRKGSSLLAIR+KYK++KFKCVAEL SPSEIPA YFEDIDQQ FNRFL
Sbjct: 382 KECILAIHDLQLNRKGSSLLAIREKYKENKFKCVAELCSPSEIPADYFEDIDQQSFNRFL 441

Query: 361 RT 363
           RT
Sbjct: 442 RT 443

[Close]
BLAST of Lsi03G005540 vs. TrEMBL
Match: V4SBC0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028641mg PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 7.3e-98
Identity = 196/349 (56.16%), Postives = 238/349 (68.19%), Query Frame = 1 

Query: 31  KRPALGEITNSLIFSSSQCSFS-------------------------DQEMTDKDLDMEE 90
           +R  LGE+TNS    SSQCS S                          +E  +++ ++ E
Sbjct: 41  RRVVLGELTNSFNAGSSQCSDSHNTQKPKRILKRKYGEDTLESIQRESKETKNENEELAE 100

Query: 91  LPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVREILVD 150
                S+        + SIY HLRSLE+E   + LPN +EK  N  S      +R+ LVD
Sbjct: 101 RKSNESLSALRNCAYSSSIYKHLRSLEIEDKTRPLPNYLEKVQNDIS----INMRQTLVD 160

Query: 151 WLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEISPPHAE 210
           WLVEV EEYKLVSDTLYLT+S++DR+LS HA+ R+KLQLLGVCCMLIASK+EEISPPH E
Sbjct: 161 WLVEVLEEYKLVSDTLYLTVSYVDRFLSSHALSRNKLQLLGVCCMLIASKYEEISPPHVE 220

Query: 211 DFCYITDNTYTKEQVLNMEREVRTFLTCE-GAPTVKVFLRIFTKVALENWKAPDLQFEIL 270
           DFCYITDNTY KE+V+ ME +V  FL  E G+PT K FLRIFT+V  EN K PDL +E L
Sbjct: 221 DFCYITDNTYMKEEVVEMEEKVLEFLNFEMGSPTTKSFLRIFTRVTEENCKKPDLPYEFL 280

Query: 271 SCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSELKECI 330
           SCYLAELSLLD+ C++ LPS VAAS+IFLSRF +QP+ HPW   LQ +SGYRPS+LKEC+
Sbjct: 281 SCYLAELSLLDYGCLRYLPSLVAASSIFLSRFIMQPKIHPWSWELQTFSGYRPSDLKECV 340

Query: 331 LAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDIDQ 354
           LAIHDL   RK +S  AIR+KY QHKFK VA LS PSE+P  YF  +D+
Sbjct: 341 LAIHDLYNKRKANSSQAIREKYMQHKFKLVALLSCPSEVPERYFAALDE 385

[Close]
BLAST of Lsi03G005540 vs. TrEMBL
Match: M5VWD5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023592mg PE=3 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 9.5e-98
Identity = 211/373 (56.57%), Postives = 254/373 (68.10%), Query Frame = 1 

Query: 1   MDPPEYHKPSVRTSKKRDSEVHSLQQATANKRPALGEITNSLIFSSSQCSFSDQE----M 60
           MD  E    +  +S KR S   SLQ     KR  LGEI+NS     S  +++ ++    +
Sbjct: 1   MDEQENSVSTTLSSNKRPSMSPSLQIPAPKKRVVLGEISNSTNDVVSTQNWAPKKPKSSL 60

Query: 61  TDKDLDMEELPEG---------RSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKA 120
             K        EG         RSVD   KS  + SIY+HL SLEM+++ +  P+ + + 
Sbjct: 61  KKKKKKKTTKEEGEALKTEIVVRSVD-PRKSDYSSSIYSHLLSLEMDMNKRSSPSYMGRV 120

Query: 121 LNGDSSLTFTRVREILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGV 180
            N  S      +REILVDWLVEVAEEY+LV+DTL+LT+S+IDRYLS +AI R+KLQLLGV
Sbjct: 121 QNDISP----NMREILVDWLVEVAEEYQLVTDTLFLTVSYIDRYLSSYAISRNKLQLLGV 180

Query: 181 CCMLIASKHEEISPPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCE-GAPTVKVFLRIF 240
            CML+ASK+EEI PP  EDFCYITDNTY  E+VL MER+V  FL  + G PT K FLRI 
Sbjct: 181 ACMLVASKYEEICPPRVEDFCYITDNTYIMEEVLEMERDVLKFLNFDTGPPTTKNFLRIL 240

Query: 241 TKVALENWKAPDLQFEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWC 300
           T+ ALEN K+   Q E LSCYL ELSLLD+ CVQ LPS VAASAIFLSRFTIQPE HPW 
Sbjct: 241 TRAALENSKSSKTQLEFLSCYLVELSLLDYSCVQFLPSVVAASAIFLSRFTIQPEVHPWS 300

Query: 301 LALQRYSGYRPSELKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAY 360
           LALQ YSGYRPS+LK C+ AIHDLQLN KGSSL A+RDKY++ K+ CV  L+S  EIPA 
Sbjct: 301 LALQSYSGYRPSDLKICVRAIHDLQLNIKGSSLRAVRDKYRKPKYACVGTLTSLPEIPAI 360

[Close]
BLAST of Lsi03G005540 vs. TrEMBL
Match: A0A061E7Z9_THECC (Cyclin A, putative OS=Theobroma cacao GN=TCM_046719 PE=3 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 8.1e-97
Identity = 198/358 (55.31%), Postives = 249/358 (69.55%), Query Frame = 1 

Query: 13  TSKKRDSEVHSL--QQATANKRPALGEITNSLIFSSSQ---C-SFSDQEMTDKDLDMEEL 72
           +SKKR    HS   Q ++  KR  LGE+TNS    S+Q   C S S+++ + +   M EL
Sbjct: 15  SSKKRAPMNHSFPPQPSSTKKRVVLGELTNSTDLGSTQNPKCRSKSERDPSSEKKPMREL 74

Query: 73  PEGRSVDCSEKSGSAF----------SIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTF 132
            E +  +  E+   +F          SIY HL SLE+E   + LPN +EK  N  +    
Sbjct: 75  KEKKRQEPIEEFDESFRDLKKCTFSSSIYEHLHSLEIEEKRRPLPNYMEKVQNDVT---- 134

Query: 133 TRVREILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKH 192
             +REIL++WLVEV EEYKLVSDTLYLT+S+IDRYLS HAI  +KLQLLGV CMLIASK+
Sbjct: 135 VNMREILIEWLVEVTEEYKLVSDTLYLTVSYIDRYLSSHAISSNKLQLLGVSCMLIASKY 194

Query: 193 EEISPPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCE-GAPTVKVFLRIFTKVALENWK 252
           EEI+PPH +DFCYITDN+YTKE+V+ ME++V   L  E G PT++ FLRI  +   E  K
Sbjct: 195 EEITPPHVDDFCYITDNSYTKEEVVEMEKDVLELLNFEIGTPTIRNFLRILMRAPQEKCK 254

Query: 253 APDLQFEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGY 312
             DLQ E LSCYL+ELSLLD+ CV+ LPS VA+SAIFLSRF IQP+ HPW  AL+ YSGY
Sbjct: 255 CQDLQLEFLSCYLSELSLLDYGCVRFLPSLVASSAIFLSRFMIQPKTHPWSDALECYSGY 314

Query: 313 RPSELKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDIDQ 354
           RPS++KEC++AIH L LNR  SSL A+ +KY QHKFKCVA LSSP E+P  YFE +++
Sbjct: 315 RPSDMKECVIAIHGLHLNRTRSSLRAVTEKYLQHKFKCVASLSSPLEVPGRYFEAVEE 368

[Close]
BLAST of Lsi03G005540 vs. TrEMBL
Match: E0CPN3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g09580 PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 5.4e-93
Identity = 198/358 (55.31%), Postives = 244/358 (68.16%), Query Frame = 1 

Query: 12  RTSKKRDSEV----HSLQQATANKRPALGEITN---------SLIFSSSQCSFSDQEMTD 71
           R +KKR +       SLQ     KR  LGE+ N         ++  S +Q      +  +
Sbjct: 12  RAAKKRAAAAMAASDSLQLPPNKKRVVLGELPNLSNVAATPAAVPASGAQKQKFRPKKKE 71

Query: 72  KDLDMEELPE-GRSVDCSEKSGS-AFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTF 131
           K       P+ G   D  +  G  A  IY +L S+EME   + L + IEK     S    
Sbjct: 72  KVKAAVVAPDVGAKSDDPQMCGPYATDIYEYLHSMEMEPKRRPLHDYIEKVQKDVSH--- 131

Query: 132 TRVREILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKH 191
             +R ILVDWLVEVAEEYKL SDTLYLTIS+IDR+LS  A++R +LQLLGV  MLIA+K+
Sbjct: 132 -NMRGILVDWLVEVAEEYKLASDTLYLTISYIDRFLSSKALNRQRLQLLGVSSMLIAAKY 191

Query: 192 EEISPPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCE-GAPTVKVFLRIFTKVALENWK 251
           EEISPPH EDFCYITDNTYTKE+V+ ME ++   L  E G PT+K FLR FT++A EN+K
Sbjct: 192 EEISPPHVEDFCYITDNTYTKEEVVKMEADILKSLNFEMGNPTIKTFLRRFTRIAQENYK 251

Query: 252 APDLQFEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGY 311
            P+LQ E L  YLAELSLLD+ CV+ LPS VAAS IFLSRFT++P+ HPWC +LQ +SGY
Sbjct: 252 TPNLQLEFLVYYLAELSLLDYGCVKFLPSMVAASVIFLSRFTLRPKTHPWCSSLQHHSGY 311

Query: 312 RPSELKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDIDQ 354
           +PSELKEC+L IHDLQL+R+G SL+A+R+KYKQHKFKCVA LSSPS IP  YFEDI +
Sbjct: 312 KPSELKECVLIIHDLQLSRRGGSLVAVREKYKQHKFKCVATLSSPSVIPVSYFEDIKE 365

[Close]
BLAST of Lsi03G005540 vs. TAIR10
Match: AT1G47230.2 (AT1G47230.2 CYCLIN A3;4)

HSP 1 Score: 296.6 bits (758), Expect = 2.1e-80
Identity = 170/355 (47.89%), Postives = 237/355 (66.76%), Query Frame = 1 

Query: 14  SKKRDSEVHSLQQATANKRPALGEITN------------SLIFSSSQCSFSDQEMTDKDL 73
           +K++ S +   +   + KR  LGE+ N              + + +  + S ++M  K L
Sbjct: 15  AKRKASSMALDENPVSKKRVVLGELPNMSNVVAVPNQERETLKAKTSVNTSKRQMK-KAL 74

Query: 74  DMEE---LPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTR 133
            + E   L E RSVD       A  I  +LR +E +   + LP+ IEK     S LT   
Sbjct: 75  MIPEASVLIESRSVDPQMCEPFASDICAYLREMEGKPKHRPLPDYIEKV---QSDLT-PH 134

Query: 134 VREILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIAS-KHE 193
           +R +LVDWLVEVAEEYKLVSDTLYLTIS++DR+LS   I+R KLQL+GV  MLIAS K+E
Sbjct: 135 MRAVLVDWLVEVAEEYKLVSDTLYLTISYVDRFLSVKPINRQKLQLVGVSAMLIASRKYE 194

Query: 194 EISPPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCE-GAPTVKVFLRIFTKVALENWKA 253
           EI PP  EDFCYITDNT+TK++V++ME ++   L  E G+PT+K FLR FT+VA E++K 
Sbjct: 195 EIGPPKVEDFCYITDNTFTKQEVVSMEADILLALQFELGSPTIKTFLRRFTRVAQEDFKD 254

Query: 254 PDLQFEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYR 313
             LQ E L CYL+ELS+LD+ CV+ LPS ++ASA+FL+RF I+P++HPW   L+ Y+ Y+
Sbjct: 255 SQLQIEFLCCYLSELSMLDYTCVKYLPSLLSASAVFLARFIIRPKQHPWNQMLEEYTKYK 314

Query: 314 PSELKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDI 352
            ++L+ C+  IHDL L+R+G++L A+R+KYKQHK+KCVA +    E+P  +FEDI
Sbjct: 315 AADLQVCVGIIHDLYLSRRGNTLEAVRNKYKQHKYKCVATMPVSPELPLAFFEDI 364

[Close]
BLAST of Lsi03G005540 vs. TAIR10
Match: AT1G47210.2 (AT1G47210.2 cyclin-dependent protein kinase 3;2)

HSP 1 Score: 288.1 bits (736), Expect = 7.5e-78
Identity = 144/293 (49.15%), Postives = 206/293 (70.31%), Query Frame = 1 

Query: 60  DLDMEELPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRV 119
           DL+ +   + RS D          IY +LR LE++   + LP+ IEK     +      +
Sbjct: 82  DLESKSDIDSRSDDPQMCGPYVADIYEYLRQLEVKPKQRPLPDYIEKVQKDVTP----SM 141

Query: 120 REILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEI 179
           R +LVDWLVEVAEEYKL S+TLYLT+SHIDR+LS   +++ KLQL+GV  MLIASK+EEI
Sbjct: 142 RGVLVDWLVEVAEEYKLGSETLYLTVSHIDRFLSLKTVNKQKLQLVGVSAMLIASKYEEI 201

Query: 180 SPPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCE-GAPTVKVFLRIFTKVALENWKAPD 239
           SPP  +DFCYITDNT++K+ V+ ME ++   L  E G PT+  F+R FT+VA +++K P 
Sbjct: 202 SPPKVDDFCYITDNTFSKQDVVKMEADILLALQFELGRPTINTFMRRFTRVAQDDFKVPH 261

Query: 240 LQFEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPS 299
           LQ E L CYL+ELS+LD++ V+ +PS +AASA+FL+RF I+P++HPW   L+ Y+ Y+ +
Sbjct: 262 LQLEPLCCYLSELSILDYKTVKFVPSLLAASAVFLARFIIRPKQHPWNQMLEEYTKYKAA 321

Query: 300 ELKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDI 352
           +L+ C+  IHDL L+R+G +L A+R+KYK HKF+CVA +    E+P  ++ED+
Sbjct: 322 DLQVCVGIIHDLYLSRRGGALQAVREKYKHHKFQCVATMPVSPELPVTFWEDV 370

[Close]
BLAST of Lsi03G005540 vs. TAIR10
Match: AT5G43080.1 (AT5G43080.1 Cyclin A3;1)

HSP 1 Score: 287.0 bits (733), Expect = 1.7e-77
Identity = 160/345 (46.38%), Postives = 223/345 (64.64%), Query Frame = 1 

Query: 13  TSKKRDSEVHSLQQATANKRPALGEITNSLIFSSSQCSFSDQEMTDKDLDMEELPEG--- 72
           T +K   E    ++    KR  LGE+ N      S+ + + Q+     +   E       
Sbjct: 16  TKRKASMEAAIDKERINKKRVVLGELPNLSNIKKSRKATTKQKKKSVSIPTIETLNSDID 75

Query: 73  -RSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVREILVDWLV 132
            RS D         SI+ +LR LE++   + L + IEK     +S     +R +LVDWLV
Sbjct: 76  TRSDDPQMCGPYVTSIFEYLRQLEVK--SRPLVDYIEKIQKDVTS----NMRGVLVDWLV 135

Query: 133 EVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEISPPHAEDFC 192
           EVAEEYKL+SDTLYL +S+IDR+LS   +++ +LQLLGV  MLIASK+EEI+PP+ +DFC
Sbjct: 136 EVAEEYKLLSDTLYLAVSYIDRFLSLKTVNKQRLQLLGVTSMLIASKYEEITPPNVDDFC 195

Query: 193 YITDNTYTKEQVLNMEREVRTFLTCE-GAPTVKVFLRIFTKVALENWKAPDLQFEILSCY 252
           YITDNTYTK++++ ME ++   L  E G PT   FLR FT+VA E+++   LQ E L  Y
Sbjct: 196 YITDNTYTKQEIVKMEADILLALQFELGNPTSNTFLRRFTRVAQEDFEMSHLQMEFLCSY 255

Query: 253 LAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSELKECILAI 312
           L+ELS+LD++ V+ LPS VAASA+FL+RF I+P++HPW + L+ Y+ Y+  +LKEC+  I
Sbjct: 256 LSELSMLDYQSVKFLPSTVAASAVFLARFIIRPKQHPWNVMLEEYTRYKAGDLKECVAMI 315

Query: 313 HDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDID 353
           HDL L+RK  +L AIR+KYKQHKFKCVA +    E+P   FED++
Sbjct: 316 HDLYLSRKCGALEAIREKYKQHKFKCVATMPVSPELPLTVFEDVN 354

[Close]
BLAST of Lsi03G005540 vs. TAIR10
Match: AT1G47220.1 (AT1G47220.1 Cyclin A3;3)

HSP 1 Score: 255.4 bits (651), Expect = 5.4e-68
Identity = 145/337 (43.03%), Postives = 208/337 (61.72%), Query Frame = 1 

Query: 16  KRDSEVHSLQQATANKRPALGEITNSLIFSSSQCSFSDQEMTDKDLDMEELPEGRSVDCS 75
           K+D ++HS             EI + L+      +F +   +  D+D       RS D  
Sbjct: 4   KKDKQIHSDHNPQDASPVEWAEIRHKLL------AFQENIQSGSDID------ARSDDPQ 63

Query: 76  EKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVREILVDWLVEVAEEYK 135
                   IY +LR LE++  ++ L + IEK       +T ++ R +LVDWLVEVAEE++
Sbjct: 64  MCGLYVSDIYEYLRELEVKPKLRPLHDYIEKI---QEDITPSK-RGVLVDWLVEVAEEFE 123

Query: 136 LVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEISPPHAEDFCYITDNTY 195
           LVS+TLYLT+S+IDR+LS   ++   LQL+GV  M IASK+EE   P  EDFCYIT NTY
Sbjct: 124 LVSETLYLTVSYIDRFLSLKMVNEHWLQLVGVSAMFIASKYEEKRRPKVEDFCYITANTY 183

Query: 196 TKEQVLNMEREVRTFLTCE-GAPTVKVFLRIFTKVALENWKAPDLQFEILSCYLAELSLL 255
           TK+ VL ME ++   L  E G PT   FLR F +VA E++K P+LQ E L CYL+ELS+L
Sbjct: 184 TKQDVLKMEEDILLALEFELGRPTTNTFLRRFIRVAQEDFKVPNLQLEPLCCYLSELSML 243

Query: 256 DHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSELKECILAIHDLQLNR 315
           D+ CV+ +PS +AASA+FL+RF I P +HPW   L+  + Y+ ++L+ C+  + DL L+R
Sbjct: 244 DYSCVKFVPSLLAASAVFLARFIILPNQHPWSQMLEECTKYKAADLQVCVEIMLDLYLSR 303

Query: 316 KGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDI 352
              +  A+R+KYKQHKF+ VA +    E+P  ++ED+
Sbjct: 304 SEGASKAVREKYKQHKFQYVAAIPVYQELPVTFWEDV 324

[Close]
BLAST of Lsi03G005540 vs. TAIR10
Match: AT1G44110.1 (AT1G44110.1 Cyclin A1;1)

HSP 1 Score: 244.6 bits (623), Expect = 9.5e-65
Identity = 133/298 (44.63%), Postives = 190/298 (63.76%), Query Frame = 1 

Query: 62  DMEELPEGRSVDCSEKSGS-------AFSIYNHLRSLEMELHMKL-LPNNIEKALNGDSS 121
           DM+++ + + V+    +G        A  IY HLR+ E +    +     ++K +N    
Sbjct: 169 DMKKMDKNQIVNIDSNNGDPQLCATFACDIYKHLRASEAKKRPDVDYMERVQKDVNSS-- 228

Query: 122 LTFTRVREILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIA 181
                +R ILVDWL+EV+EEY+LV +TLYLT+++IDRYLS + I R KLQLLGV CM+IA
Sbjct: 229 -----MRGILVDWLIEVSEEYRLVPETLYLTVNYIDRYLSGNVISRQKLQLLGVACMMIA 288

Query: 182 SKHEEISPPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCE-GAPTVKVFLRIFTKVALE 241
           +K+EEI  P  E+FCYITDNTY K++VL+ME +V  +L  E  APT K FLR F + A  
Sbjct: 289 AKYEEICAPQVEEFCYITDNTYLKDEVLDMESDVLNYLKFEMTAPTTKCFLRRFVRAAHG 348

Query: 242 NWKAPDLQFEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRY 301
             +AP +Q E ++ Y+AELSLL++  +   PS VAASAIFL+++ + P + PW   LQ Y
Sbjct: 349 VHEAPLMQLECMANYIAELSLLEYTMLSHSPSLVAASAIFLAKYILDPTRRPWNSTLQHY 408

Query: 302 SGYRPSELKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFED 351
           + Y+  EL+ C+  +  L     GS+L A+R+KY QHK+K VA+   PS IP  +F +
Sbjct: 409 TQYKAMELRGCVKDLQRLCSTAHGSTLPAVREKYSQHKYKFVAKKFCPSVIPQEFFNN 459

[Close]
BLAST of Lsi03G005540 vs. NCBI nr
Match: gi|449438631|ref|XP_004137091.1| (PREDICTED: putative cyclin-A3-1 isoform X2 [Cucumis sativus])

HSP 1 Score: 644.0 bits (1660), Expect = 1.5e-181
Identity = 319/362 (88.12%), Postives = 332/362 (91.71%), Query Frame = 1 

Query: 1   MDPPEYHKPSVRTSKKRDSEVHSLQQATANKRPALGEITNSLIFSSSQCSFSDQEMTDKD 60
           MD  EY+KPS  TSKKRDSE HSLQQATANKRP LGEITNS IFSSSQCSFSDQEM DKD
Sbjct: 1   MDSSEYYKPSFPTSKKRDSEEHSLQQATANKRPVLGEITNSFIFSSSQCSFSDQEMADKD 60

Query: 61  LDMEELPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVR 120
           LD EELPE RSVDC EKSGS+  IYNHLRSLEMEL+MK LPNNIEKA N DS  TFTR R
Sbjct: 61  LDKEELPEVRSVDCPEKSGSSLGIYNHLRSLEMELNMKFLPNNIEKARNDDSCSTFTRWR 120

Query: 121 EILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEIS 180
           EILVDWLVEVAEEYKLVSDTLYLTISH+DRYLSWH +D+SKLQL+GVCCMLIASKHEEIS
Sbjct: 121 EILVDWLVEVAEEYKLVSDTLYLTISHVDRYLSWHVVDKSKLQLIGVCCMLIASKHEEIS 180

Query: 181 PPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCEGAPTVKVFLRIFTKVALENWKAPDLQ 240
           PPH EDFCYITDNTYTKEQVLNMEREV  FL CEGAPTVKVFLRIFTKV+LENWKAPDLQ
Sbjct: 181 PPHVEDFCYITDNTYTKEQVLNMEREVHRFLACEGAPTVKVFLRIFTKVSLENWKAPDLQ 240

Query: 241 FEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSEL 300
           FE+L CYLAELSLLDHRC QILPSKVAASAIFLSRFTIQPE+HPWCLALQRYSGYR SEL
Sbjct: 241 FELLCCYLAELSLLDHRCAQILPSKVAASAIFLSRFTIQPEEHPWCLALQRYSGYRASEL 300

Query: 301 KECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDIDQQLFNRFL 360
           KECILAIHDLQLNRKGSSLLAIR+KYK++KFKCVAEL SPSEIPA YFEDIDQQ FNRFL
Sbjct: 301 KECILAIHDLQLNRKGSSLLAIREKYKENKFKCVAELCSPSEIPADYFEDIDQQSFNRFL 360

Query: 361 RT 363
           RT
Sbjct: 361 RT 362

[Close]
BLAST of Lsi03G005540 vs. NCBI nr
Match: gi|700188638|gb|KGN43871.1| (hypothetical protein Csa_7G071600 [Cucumis sativus])

HSP 1 Score: 644.0 bits (1660), Expect = 1.5e-181
Identity = 319/362 (88.12%), Postives = 332/362 (91.71%), Query Frame = 1 

Query: 1   MDPPEYHKPSVRTSKKRDSEVHSLQQATANKRPALGEITNSLIFSSSQCSFSDQEMTDKD 60
           MD  EY+KPS  TSKKRDSE HSLQQATANKRP LGEITNS IFSSSQCSFSDQEM DKD
Sbjct: 82  MDSSEYYKPSFPTSKKRDSEEHSLQQATANKRPVLGEITNSFIFSSSQCSFSDQEMADKD 141

Query: 61  LDMEELPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVR 120
           LD EELPE RSVDC EKSGS+  IYNHLRSLEMEL+MK LPNNIEKA N DS  TFTR R
Sbjct: 142 LDKEELPEVRSVDCPEKSGSSLGIYNHLRSLEMELNMKFLPNNIEKARNDDSCSTFTRWR 201

Query: 121 EILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEIS 180
           EILVDWLVEVAEEYKLVSDTLYLTISH+DRYLSWH +D+SKLQL+GVCCMLIASKHEEIS
Sbjct: 202 EILVDWLVEVAEEYKLVSDTLYLTISHVDRYLSWHVVDKSKLQLIGVCCMLIASKHEEIS 261

Query: 181 PPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCEGAPTVKVFLRIFTKVALENWKAPDLQ 240
           PPH EDFCYITDNTYTKEQVLNMEREV  FL CEGAPTVKVFLRIFTKV+LENWKAPDLQ
Sbjct: 262 PPHVEDFCYITDNTYTKEQVLNMEREVHRFLACEGAPTVKVFLRIFTKVSLENWKAPDLQ 321

Query: 241 FEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSEL 300
           FE+L CYLAELSLLDHRC QILPSKVAASAIFLSRFTIQPE+HPWCLALQRYSGYR SEL
Sbjct: 322 FELLCCYLAELSLLDHRCAQILPSKVAASAIFLSRFTIQPEEHPWCLALQRYSGYRASEL 381

Query: 301 KECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDIDQQLFNRFL 360
           KECILAIHDLQLNRKGSSLLAIR+KYK++KFKCVAEL SPSEIPA YFEDIDQQ FNRFL
Sbjct: 382 KECILAIHDLQLNRKGSSLLAIREKYKENKFKCVAELCSPSEIPADYFEDIDQQSFNRFL 441

Query: 361 RT 363
           RT
Sbjct: 442 RT 443

[Close]
BLAST of Lsi03G005540 vs. NCBI nr
Match: gi|778724932|ref|XP_011658884.1| (PREDICTED: putative cyclin-A3-1 isoform X1 [Cucumis sativus])

HSP 1 Score: 639.4 bits (1648), Expect = 3.8e-180
Identity = 319/363 (87.88%), Postives = 332/363 (91.46%), Query Frame = 1 

Query: 1   MDPPEYHKPSVRTSKKRDSEVHSLQQATANKRPALGEITNSLIFSSSQCSFSDQEMTDKD 60
           MD  EY+KPS  TSKKRDSE HSLQQATANKRP LGEITNS IFSSSQCSFSDQEM DKD
Sbjct: 1   MDSSEYYKPSFPTSKKRDSEEHSLQQATANKRPVLGEITNSFIFSSSQCSFSDQEMADKD 60

Query: 61  LDMEELPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVR 120
           LD EELPE RSVDC EKSGS+  IYNHLRSLEMEL+MK LPNNIEKA N DS  TFTR R
Sbjct: 61  LDKEELPEVRSVDCPEKSGSSLGIYNHLRSLEMELNMKFLPNNIEKARNDDSCSTFTRWR 120

Query: 121 EILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEIS 180
           EILVDWLVEVAEEYKLVSDTLYLTISH+DRYLSWH +D+SKLQL+GVCCMLIASKHEEIS
Sbjct: 121 EILVDWLVEVAEEYKLVSDTLYLTISHVDRYLSWHVVDKSKLQLIGVCCMLIASKHEEIS 180

Query: 181 PPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCEGAPTVKVFLRIFTKVALENWK-APDL 240
           PPH EDFCYITDNTYTKEQVLNMEREV  FL CEGAPTVKVFLRIFTKV+LENWK APDL
Sbjct: 181 PPHVEDFCYITDNTYTKEQVLNMEREVHRFLACEGAPTVKVFLRIFTKVSLENWKQAPDL 240

Query: 241 QFEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSE 300
           QFE+L CYLAELSLLDHRC QILPSKVAASAIFLSRFTIQPE+HPWCLALQRYSGYR SE
Sbjct: 241 QFELLCCYLAELSLLDHRCAQILPSKVAASAIFLSRFTIQPEEHPWCLALQRYSGYRASE 300

Query: 301 LKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDIDQQLFNRF 360
           LKECILAIHDLQLNRKGSSLLAIR+KYK++KFKCVAEL SPSEIPA YFEDIDQQ FNRF
Sbjct: 301 LKECILAIHDLQLNRKGSSLLAIREKYKENKFKCVAELCSPSEIPADYFEDIDQQSFNRF 360

Query: 361 LRT 363
           LRT
Sbjct: 361 LRT 363

[Close]
BLAST of Lsi03G005540 vs. NCBI nr
Match: gi|659110033|ref|XP_008455012.1| (PREDICTED: cyclin-A3-1-like isoform X2 [Cucumis melo])

HSP 1 Score: 624.0 bits (1608), Expect = 1.6e-175
Identity = 308/351 (87.75%), Postives = 324/351 (92.31%), Query Frame = 1 

Query: 1   MDPPEYHKPSVRTSKKRDSEVHSLQQATANKRPALGEITNSLIFSSSQCSFSDQEMTDKD 60
           MD  EYHKPS RTSKKRDSE HSLQQ TANKRP LGEITNSLIFSSSQCSFSDQEMTDKD
Sbjct: 1   MDSSEYHKPSFRTSKKRDSEEHSLQQTTANKRPVLGEITNSLIFSSSQCSFSDQEMTDKD 60

Query: 61  LDMEELPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVR 120
           LD +ELPE RSVDC EKSGS+ SIYNHLRSLEMELHMK LPNNIE A NGDS LTFTR R
Sbjct: 61  LDTDELPEVRSVDCPEKSGSSLSIYNHLRSLEMELHMKFLPNNIENAHNGDSGLTFTRWR 120

Query: 121 EILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEIS 180
           EILVDWLVEVAEEYKLVSDTLYLTISH+DRYLSWH +DR+ LQLLGVCCMLIASKHEEIS
Sbjct: 121 EILVDWLVEVAEEYKLVSDTLYLTISHMDRYLSWHVVDRNNLQLLGVCCMLIASKHEEIS 180

Query: 181 PPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCEGAPTVKVFLRIFTKVALENWKAPDLQ 240
           PPH EDFCYITDNTYTKEQVLNMEREV  FLTCEGAPTVKVFLRIFTKV+LENWKAPD++
Sbjct: 181 PPHVEDFCYITDNTYTKEQVLNMEREVHRFLTCEGAPTVKVFLRIFTKVSLENWKAPDVE 240

Query: 241 FEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSEL 300
           FE+L CYLAELSLLDHRC Q+LPSKVAASAIFLSRFTIQP +HPWCLALQ Y+GYRPSEL
Sbjct: 241 FELLICYLAELSLLDHRCAQLLPSKVAASAIFLSRFTIQPGEHPWCLALQHYTGYRPSEL 300

Query: 301 KECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDI 352
           KECILAIHDLQLNRKGSSL AIR+KYK++KF+ VAELSSPSEIPA YFEDI
Sbjct: 301 KECILAIHDLQLNRKGSSLRAIRNKYKENKFRRVAELSSPSEIPADYFEDI 351

[Close]
BLAST of Lsi03G005540 vs. NCBI nr
Match: gi|659110031|ref|XP_008455011.1| (PREDICTED: cyclin-A3-1-like isoform X1 [Cucumis melo])

HSP 1 Score: 619.4 bits (1596), Expect = 4.0e-174
Identity = 308/352 (87.50%), Postives = 324/352 (92.05%), Query Frame = 1 

Query: 1   MDPPEYHKPSVRTSKKRDSEVHSLQQATANKRPALGEITNSLIFSSSQCSFSDQEMTDKD 60
           MD  EYHKPS RTSKKRDSE HSLQQ TANKRP LGEITNSLIFSSSQCSFSDQEMTDKD
Sbjct: 1   MDSSEYHKPSFRTSKKRDSEEHSLQQTTANKRPVLGEITNSLIFSSSQCSFSDQEMTDKD 60

Query: 61  LDMEELPEGRSVDCSEKSGSAFSIYNHLRSLEMELHMKLLPNNIEKALNGDSSLTFTRVR 120
           LD +ELPE RSVDC EKSGS+ SIYNHLRSLEMELHMK LPNNIE A NGDS LTFTR R
Sbjct: 61  LDTDELPEVRSVDCPEKSGSSLSIYNHLRSLEMELHMKFLPNNIENAHNGDSGLTFTRWR 120

Query: 121 EILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAIDRSKLQLLGVCCMLIASKHEEIS 180
           EILVDWLVEVAEEYKLVSDTLYLTISH+DRYLSWH +DR+ LQLLGVCCMLIASKHEEIS
Sbjct: 121 EILVDWLVEVAEEYKLVSDTLYLTISHMDRYLSWHVVDRNNLQLLGVCCMLIASKHEEIS 180

Query: 181 PPHAEDFCYITDNTYTKEQVLNMEREVRTFLTCEGAPTVKVFLRIFTKVALENWK-APDL 240
           PPH EDFCYITDNTYTKEQVLNMEREV  FLTCEGAPTVKVFLRIFTKV+LENWK APD+
Sbjct: 181 PPHVEDFCYITDNTYTKEQVLNMEREVHRFLTCEGAPTVKVFLRIFTKVSLENWKQAPDV 240

Query: 241 QFEILSCYLAELSLLDHRCVQILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSE 300
           +FE+L CYLAELSLLDHRC Q+LPSKVAASAIFLSRFTIQP +HPWCLALQ Y+GYRPSE
Sbjct: 241 EFELLICYLAELSLLDHRCAQLLPSKVAASAIFLSRFTIQPGEHPWCLALQHYTGYRPSE 300

Query: 301 LKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDI 352
           LKECILAIHDLQLNRKGSSL AIR+KYK++KF+ VAELSSPSEIPA YFEDI
Sbjct: 301 LKECILAIHDLQLNRKGSSLRAIRNKYKENKFRRVAELSSPSEIPADYFEDI 352

The following BLAST results are available for this feature:
BLAST of Lsi03G005540 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CCA31_ORYSJ1.4e-8155.44Cyclin-A3-1 OS=Oryza sativa subsp. japonica GN=CYCA3-1 PE=3 SV=1[more]
CCA32_ORYSJ7.5e-8055.47Cyclin-A3-2 OS=Oryza sativa subsp. japonica GN=CYCA3-2 PE=2 SV=1[more]
CCA34_ARATH3.7e-7947.89Cyclin-A3-4 OS=Arabidopsis thaliana GN=CYCA3-4 PE=1 SV=1[more]
CCA32_ARATH1.3e-7649.15Cyclin-A3-2 OS=Arabidopsis thaliana GN=CYCA3-2 PE=2 SV=1[more]
CCA31_ARATH3.0e-7646.38Putative cyclin-A3-1 OS=Arabidopsis thaliana GN=CYCA3-1 PE=3 SV=1[more]
BLAST of Lsi03G005540 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7S8_CUCSA1.1e-18188.12Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071600 PE=3 SV=1[more]
V4SBC0_9ROSI7.3e-9856.16Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028641mg PE=3 SV=1[more]
M5VWD5_PRUPE9.5e-9856.57Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023592mg PE=3 SV=1[more]
A0A061E7Z9_THECC8.1e-9755.31Cyclin A, putative OS=Theobroma cacao GN=TCM_046719 PE=3 SV=1[more]
E0CPN3_VITVI5.4e-9355.31Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g09580 PE=3 SV=... [more]
BLAST of Lsi03G005540 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G47230.22.1e-8047.89 CYCLIN A3;4[more]
AT1G47210.27.5e-7849.15 cyclin-dependent protein kinase 3;2[more]
AT5G43080.11.7e-7746.38 Cyclin A3;1[more]
AT1G47220.15.4e-6843.03 Cyclin A3;3[more]
AT1G44110.19.5e-6544.63 Cyclin A1;1[more]
BLAST of Lsi03G005540 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449438631|ref|XP_004137091.1|1.5e-18188.12PREDICTED: putative cyclin-A3-1 isoform X2 [Cucumis sativus][more]
gi|700188638|gb|KGN43871.1|1.5e-18188.12hypothetical protein Csa_7G071600 [Cucumis sativus][more]
gi|778724932|ref|XP_011658884.1|3.8e-18087.88PREDICTED: putative cyclin-A3-1 isoform X1 [Cucumis sativus][more]
gi|659110033|ref|XP_008455012.1|1.6e-17587.75PREDICTED: cyclin-A3-1-like isoform X2 [Cucumis melo][more]
gi|659110031|ref|XP_008455011.1|4.0e-17487.50PREDICTED: cyclin-A3-1-like isoform X1 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006334nucleosome assembly
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR013763Cyclin-like
IPR006671Cyclin_N
IPR005818Histone_H1/H5_H15
IPR004367Cyclin_C-dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006334 nucleosome assembly
biological_process GO:0008150 biological_process
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G005540.1Lsi03G005540.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004367Cyclin, C-terminal domainPFAMPF02984Cyclin_Ccoord: 217..339
score: 2.4
IPR004367Cyclin, C-terminal domainSMARTSM01332Cyclin_C_2coord: 217..340
score: 1.9
IPR005818Linker histone H1/H5, domain H15PROFILEPS51504H15coord: 288..363
score: 13
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 110..210
score: 1.2
IPR013763Cyclin-likeGENE3DG3DSA:1.10.472.10coord: 207..344
score: 9.2E-38coord: 118..206
score: 8.1
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 221..309
score: 2.8E-14coord: 125..209
score: 8.9
IPR013763Cyclin-likeunknownSSF47954Cyclin-likecoord: 217..341
score: 2.38E-34coord: 85..212
score: 2.55
NoneNo IPR availablePIRPIRSF001771Cyclin_A_B_D_Ecoord: 3..347
score: 9.0
NoneNo IPR availablePANTHERPTHR10177CYCLINEcoord: 81..361
score: 1.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi03G005540Csa4G642270Cucumber (Chinese Long) v2culsiB279
Lsi03G005540Csa7G071600Cucumber (Chinese Long) v2culsiB522
Lsi03G005540Csa2G354980Cucumber (Chinese Long) v2culsiB116
Lsi03G005540CSPI04G24580Wild cucumber (PI 183967)cpilsiB278
Lsi03G005540CSPI07G07070Wild cucumber (PI 183967)cpilsiB536
Lsi03G005540Cucsa.219350Cucumber (Gy14) v1cgylsiB367
Lsi03G005540Cucsa.352630Cucumber (Gy14) v1cgylsiB568
Lsi03G005540CmaCh19G005670Cucurbita maxima (Rimu)cmalsiB484
Lsi03G005540CmaCh05G001580Cucurbita maxima (Rimu)cmalsiB723
Lsi03G005540CmaCh11G017160Cucurbita maxima (Rimu)cmalsiB116
Lsi03G005540CmoCh05G001590Cucurbita moschata (Rifu)cmolsiB714
Lsi03G005540CmoCh01G018590Cucurbita moschata (Rifu)cmolsiB411
Lsi03G005540CmoCh11G013990Cucurbita moschata (Rifu)cmolsiB103
Lsi03G005540CmoCh19G005800Cucurbita moschata (Rifu)cmolsiB468
Lsi03G005540Cla020624Watermelon (97103) v1lsiwmB256
Lsi03G005540Cla022605Watermelon (97103) v1lsiwmB247
Lsi03G005540Cla016075Watermelon (97103) v1lsiwmB268
Lsi03G005540MELO3C018501Melon (DHL92) v3.5.1lsimeB247
Lsi03G005540MELO3C010828Melon (DHL92) v3.5.1lsimeB258
Lsi03G005540MELO3C016796Melon (DHL92) v3.5.1lsimeB272
Lsi03G005540ClCG05G020320Watermelon (Charleston Gray)lsiwcgB243
Lsi03G005540ClCG08G016260Watermelon (Charleston Gray)lsiwcgB251
Lsi03G005540ClCG02G006570Watermelon (Charleston Gray)lsiwcgB233
Lsi03G005540MELO3C010828.2Melon (DHL92) v3.6.1lsimedB271
Lsi03G005540MELO3C018501.2Melon (DHL92) v3.6.1lsimedB260
Lsi03G005540MELO3C016796.2Melon (DHL92) v3.6.1lsimedB285
Lsi03G005540Cla97C05G102060Watermelon (97103) v2lsiwmbB237
Lsi03G005540Cla97C08G159930Watermelon (97103) v2lsiwmbB244
Lsi03G005540Cla97C02G033560Watermelon (97103) v2lsiwmbB226
Lsi03G005540Bhi04G000369Wax gourdlsiwgoB323
Lsi03G005540Bhi05G000915Wax gourdlsiwgoB320
Lsi03G005540Bhi09G002684Wax gourdlsiwgoB344
Lsi03G005540Cp4.1LG02g06570Cucurbita pepo (Zucchini)cpelsiB454
Lsi03G005540Cp4.1LG04g07790Cucurbita pepo (Zucchini)cpelsiB543
Lsi03G005540Cp4.1LG15g04470Cucurbita pepo (Zucchini)cpelsiB208
Lsi03G005540CsGy2G018630Cucumber (Gy14) v2cgyblsiB103
Lsi03G005540CsGy7G006660Cucumber (Gy14) v2cgyblsiB488
Lsi03G005540Carg26990Silver-seed gourdcarlsiB167
Lsi03G005540Carg16349Silver-seed gourdcarlsiB411
Lsi03G005540CsaV3_7G008040Cucumber (Chinese Long) v3cuclsiB555
Lsi03G005540CsaV3_4G034820Cucumber (Chinese Long) v3cuclsiB300
Lsi03G005540CsaV3_2G026360Cucumber (Chinese Long) v3cuclsiB128
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Lsi03G005540Lsi04G015080Bottle gourd (USVL1VR-Ls)lsilsiB130
Lsi03G005540Lsi08G015050Bottle gourd (USVL1VR-Ls)lsilsiB135
The following block(s) are covering this gene:
GeneOrganismBlock
Lsi03G005540Cucurbita moschata (Rifu)cmolsiB650
Lsi03G005540Cucurbita pepo (Zucchini)cpelsiB348
Lsi03G005540Silver-seed gourdcarlsiB267
Lsi03G005540Silver-seed gourdcarlsiB342
Lsi03G005540Cucurbita maxima (Rimu)cmalsiB309
Lsi03G005540Cucurbita maxima (Rimu)cmalsiB662