BLAST of Carg16347 vs. NCBI nr
Match:
XP_022952095.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 1197.2 bits (3096), Expect = 0.0e+00
Identity = 592/605 (97.85%), Postives = 599/605 (99.01%), Query Frame = 0
Query: 1 MVNGKSYAMRSSCINPEFINLSDLLQGRINSSRLRQIHGQVFRLLKHQDNLIATRLIGHY 60
MVNGKSYAMRSSCIN EFINLSDLLQGRINSSRLRQIHG+VFRLLKHQDNLIATRLIGHY
Sbjct: 1 MVNGKSYAMRSSCINLEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY 60
Query: 61 PHSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
P+SVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK
Sbjct: 61 PYSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
Query: 121 AFHRSSHSPNVKQVHTHVLKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMA 180
AFHRSSHSPNVKQVHTHV+KMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMA
Sbjct: 121 AFHRSSHSPNVKQVHTHVMKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMA 180
Query: 181 CCWTPLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL 240
CCWT LIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL
Sbjct: 181 CCWTSLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL 240
Query: 241 TQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCP 300
TQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCP
Sbjct: 241 TQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCP 300
Query: 301 VEALTLFRLMLENPQCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRRGIIASNKM 360
VEALTLFRLMLENP CKPNHVTMVTVLSACAQIGDLQLGRRVHEALEH GRRGIIASNKM
Sbjct: 301 VEALTLFRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHGGRRGIIASNKM 360
Query: 361 LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD 420
LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD
Sbjct: 361 LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD 420
Query: 421 IKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLEHYACYIDLLARAGCVEDA 480
IKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSL+HYACYIDLLARAGCVEDA
Sbjct: 421 IKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDA 480
Query: 481 LEVVSTMPFEPNSFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSFATD 540
LEVVSTMPFEPN+FVWSSLLRGCLLHSRFELAR+VSKKLVEVDPESSAGYVMQANSFATD
Sbjct: 481 LEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARYVSKKLVEVDPESSAGYVMQANSFATD 540
Query: 541 LQWDDVSALRWFMREKGVHKQPGRSWISVDGIVHEFFSATKSHPCVDLLYSTLSELERQM 600
LQWDDVSALRWFMREKGVHKQPGRSWIS+DG VHEFFSATKSHPCVDLLYSTLSELERQM
Sbjct: 541 LQWDDVSALRWFMREKGVHKQPGRSWISIDGTVHEFFSATKSHPCVDLLYSTLSELERQM 600
Query: 601 KLAIP 606
KL IP
Sbjct: 601 KLVIP 605
BLAST of Carg16347 vs. NCBI nr
Match:
XP_022972521.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita maxima])
HSP 1 Score: 1178.7 bits (3048), Expect = 0.0e+00
Identity = 584/605 (96.53%), Postives = 594/605 (98.18%), Query Frame = 0
Query: 1 MVNGKSYAMRSSCINPEFINLSDLLQGRINSSRLRQIHGQVFRLLKHQDNLIATRLIGHY 60
MVNGKSYAMRSSCINPEFINLSDLLQGRINSSRLRQIHG+VFRLLKHQDNLIATRLIGHY
Sbjct: 1 MVNGKSYAMRSSCINPEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY 60
Query: 61 PHSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
PHSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK
Sbjct: 61 PHSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
Query: 121 AFHRSSHSPNVKQVHTHVLKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMA 180
AFHRSSHSPNVKQVHT V+KMGYLGDSFISNALLGVYARGL+DM SAHNMFDEMSEREMA
Sbjct: 121 AFHRSSHSPNVKQVHTQVMKMGYLGDSFISNALLGVYARGLQDMCSAHNMFDEMSEREMA 180
Query: 181 CCWTPLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL 240
CCWT LIAGYAHMGL EKALLLFVMMIKENIQP DDTMVSVLSACSKLQIAEIEKWVAEL
Sbjct: 181 CCWTSLIAGYAHMGLVEKALLLFVMMIKENIQPVDDTMVSVLSACSKLQIAEIEKWVAEL 240
Query: 241 TQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCP 300
TQL+NEF SC DSINIVLVYLYGKWGKIEKSEEKF+EIVDKRSAIVWNSMINAYFQNGCP
Sbjct: 241 TQLINEFASCGDSINIVLVYLYGKWGKIEKSEEKFSEIVDKRSAIVWNSMINAYFQNGCP 300
Query: 301 VEALTLFRLMLENPQCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRRGIIASNKM 360
VEALTLFRLMLENP CKPNHVTMVTVLSACAQIGDLQLGRRVHEALEH GRRGIIASNKM
Sbjct: 301 VEALTLFRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHGGRRGIIASNKM 360
Query: 361 LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD 420
LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD
Sbjct: 361 LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD 420
Query: 421 IKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLEHYACYIDLLARAGCVEDA 480
IKPTTGTFIGLLSACSHSGFLEQG QIFIQMATRYSTSPSLEHYACYIDLLARAGCVEDA
Sbjct: 421 IKPTTGTFIGLLSACSHSGFLEQGHQIFIQMATRYSTSPSLEHYACYIDLLARAGCVEDA 480
Query: 481 LEVVSTMPFEPNSFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSFATD 540
L+VVSTMPFEPN+FVWSSLLRGCLLHSRFELAR+VSKKLVEVDPESSAGYVMQANSFATD
Sbjct: 481 LKVVSTMPFEPNNFVWSSLLRGCLLHSRFELARYVSKKLVEVDPESSAGYVMQANSFATD 540
Query: 541 LQWDDVSALRWFMREKGVHKQPGRSWISVDGIVHEFFSATKSHPCVDLLYSTLSELERQM 600
LQWDDVSALRWFMREKGVHKQPGRSWIS++GIVHEFFSATKSHPCVDLLYSTLSELERQM
Sbjct: 541 LQWDDVSALRWFMREKGVHKQPGRSWISINGIVHEFFSATKSHPCVDLLYSTLSELERQM 600
Query: 601 KLAIP 606
KL IP
Sbjct: 601 KLVIP 605
BLAST of Carg16347 vs. NCBI nr
Match:
XP_008455016.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 [Cucumis melo])
HSP 1 Score: 1051.6 bits (2718), Expect = 1.0e-303
Identity = 516/608 (84.87%), Postives = 559/608 (91.94%), Query Frame = 0
Query: 1 MVNGKSYAMRSSCINPEFINLSDLLQGRINSSRLRQIHGQVFRLLKHQDNLIATRLIGHY 60
M+N KSYAMR +NPEFINLSDLLQGRIN+S LRQIH +VFRLLKHQDNLIATRLIGHY
Sbjct: 1 MINIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHY 60
Query: 61 PHSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
PHSVG+RVFNQL+RPNIFPCNAIIRVLAE N SFLA SIFKSLK LSLSPNDFTFSFLLK
Sbjct: 61 PHSVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLK 120
Query: 121 AFHRSSHSPNVKQVHTHVLKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMA 180
AFHRS ++ +VKQVHTHVLKMGY GDSFISNALLGVYARGLKDM SAH +FDEMS+REMA
Sbjct: 121 AFHRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMA 180
Query: 181 CCWTPLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL 240
CCWT LIAGYA MGLAEKA+L+FV MIKEN+QPEDDTMVSVLSACSK QIAEIEKWV L
Sbjct: 181 CCWTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVAL 240
Query: 241 TQLVNEFD---SCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQN 300
+LVN+FD SCCDSINIVL+YLYGKWG +EKSEEKFNEI+DK+S +VWNSMINAYFQN
Sbjct: 241 RELVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQN 300
Query: 301 GCPVEALTLFRLMLENPQCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRRGIIAS 360
G PVEALTLFRLM+ENP CKPNHVTMVTV+SACAQIGDLQLG VHE L+ SGR+GIIAS
Sbjct: 301 GFPVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIAS 360
Query: 361 NKMLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQ 420
NKMLATALIDMYCK GSLE+AK+VFH+LI KDVISFNAMIMGLAVNGK DEALKLF+QMQ
Sbjct: 361 NKMLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQ 420
Query: 421 ESDIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLEHYACYIDLLARAGCV 480
E DI+P+TGTFIGLLSACSHSGFLEQG QIFI+M T+Y SPSLEHYACYIDLLARAG
Sbjct: 421 EIDIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRF 480
Query: 481 EDALEVVSTMPFEPNSFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSF 540
EDALEVVSTMPFEPN+FVWSSLLRGCLLHS FELA++VSKKLVEVDPE+SAGYVMQANSF
Sbjct: 481 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSF 540
Query: 541 ATDLQWDDVSALRWFMREKGVHKQPGRSWISVDGIVHEFFSATKSHPCVDLLYSTLSELE 600
A+D QWDDVSALRWFMREKGVHKQPG+SWIS+DG VHEFFSATKSHP VDLLYSTL+EL+
Sbjct: 541 ASDRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELD 600
Query: 601 RQMKLAIP 606
+Q KL IP
Sbjct: 601 KQTKLVIP 608
BLAST of Carg16347 vs. NCBI nr
Match:
KGN43869.1 (hypothetical protein Csa_7G071580 [Cucumis sativus])
HSP 1 Score: 1040.0 bits (2688), Expect = 3.1e-300
Identity = 508/600 (84.67%), Postives = 552/600 (92.00%), Query Frame = 0
Query: 9 MRSSCINPEFINLSDLLQGRINSSRLRQIHGQVFRLLKHQDNLIATRLIGHYPHSVGIRV 68
MR C+NPEFI+LSDLLQGRIN+S LRQIH +VFRLLKHQDNLIATRLIGHYPHSVG+RV
Sbjct: 1 MRCLCVNPEFISLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRV 60
Query: 69 FNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHS 128
FNQL+RPNIFPCNAIIRVLAE N SF A SIFK LK LSLSPNDFTFSFLLKAFHRS ++
Sbjct: 61 FNQLIRPNIFPCNAIIRVLAEHNSSFFALSIFKYLKHLSLSPNDFTFSFLLKAFHRSCNA 120
Query: 129 PNVKQVHTHVLKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMACCWTPLIA 188
NVKQVHTHVLKMGY GDSFISN+LLGVYARGLK+M SAH +FDEMS+REMACCWT LIA
Sbjct: 121 LNVKQVHTHVLKMGYFGDSFISNSLLGVYARGLKEMASAHKLFDEMSDREMACCWTSLIA 180
Query: 189 GYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAELTQLVNEFD 248
GYA MGLAEKA+LLF MM+KENIQPEDDT+VSVLSACSKLQIAEIEKWV EL QLVN+ D
Sbjct: 181 GYAQMGLAEKAMLLFFMMVKENIQPEDDTIVSVLSACSKLQIAEIEKWVVELRQLVNKCD 240
Query: 249 ---SCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCPVEALT 308
SCCDSINIVL+YLYGKWG +EKSEEKFNE+VDKRS +VWNSMINAYFQNG PVEALT
Sbjct: 241 SKRSCCDSINIVLIYLYGKWGMVEKSEEKFNEVVDKRSVLVWNSMINAYFQNGFPVEALT 300
Query: 309 LFRLMLENPQCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRRGIIASNKMLATAL 368
LFRLM+ENP CKPNHVTMVTV+SACAQIGDLQLG VHE L+ GR+GIIASNKMLAT+L
Sbjct: 301 LFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRGGRKGIIASNKMLATSL 360
Query: 369 IDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTT 428
IDMYCK GSLE+AK+VFH+LI KDVI+FNAMIMGLAVN K DEALKLF+QMQE +I P+T
Sbjct: 361 IDMYCKCGSLERAKEVFHQLINKDVITFNAMIMGLAVNSKGDEALKLFAQMQEINIIPST 420
Query: 429 GTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLEHYACYIDLLARAGCVEDALEVVS 488
GTFIGLLSACSHSGFLEQGRQIFI+M T Y SPSLEHYACYIDLLARAG +DALEV+S
Sbjct: 421 GTFIGLLSACSHSGFLEQGRQIFIEMTTHYLVSPSLEHYACYIDLLARAGHFDDALEVIS 480
Query: 489 TMPFEPNSFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSFATDLQWDD 548
TMPFEPN+FVWSSLLRGCLLHSRFELA++VSKKLVEVDPE+SAGYVMQANSFATDLQWDD
Sbjct: 481 TMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDD 540
Query: 549 VSALRWFMREKGVHKQPGRSWISVDGIVHEFFSATKSHPCVDLLYSTLSELERQMKLAIP 606
VSALRWFMREKGVHKQPG+SWIS+DG VHEFFSATKSHP VDLLY+TL+ELE+QMKL IP
Sbjct: 541 VSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYTTLNELEKQMKLVIP 600
BLAST of Carg16347 vs. NCBI nr
Match:
XP_022952096.1 (pentatricopeptide repeat-containing protein At3g29230-like isoform X2 [Cucurbita moschata])
HSP 1 Score: 1006.1 bits (2600), Expect = 4.9e-290
Identity = 514/605 (84.96%), Postives = 521/605 (86.12%), Query Frame = 0
Query: 1 MVNGKSYAMRSSCINPEFINLSDLLQGRINSSRLRQIHGQVFRLLKHQDNLIATRLIGHY 60
MVNGKSYAMRSSCIN EFINLSDLLQGRINSSRLRQIHG+VFRLLKHQDNLIATRLIGHY
Sbjct: 1 MVNGKSYAMRSSCINLEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY 60
Query: 61 PHSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
P+SVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK
Sbjct: 61 PYSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
Query: 121 AFHRSSHSPNVKQVHTHVLKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMA 180
AFHRSSHSPNVKQVHTHV+KMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMA
Sbjct: 121 AFHRSSHSPNVKQVHTHVMKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMA 180
Query: 181 CCWTPLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL 240
CCWT LIAGYAHMGLAEKALLLFVMMIKENIQPEDDTM
Sbjct: 181 CCWTSLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTM---------------------- 240
Query: 241 TQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCP 300
NGCP
Sbjct: 241 --------------------------------------------------------NGCP 300
Query: 301 VEALTLFRLMLENPQCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRRGIIASNKM 360
VEALTLFRLMLENP CKPNHVTMVTVLSACAQIGDLQLGRRVHEALEH GRRGIIASNKM
Sbjct: 301 VEALTLFRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHGGRRGIIASNKM 360
Query: 361 LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD 420
LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD
Sbjct: 361 LATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESD 420
Query: 421 IKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLEHYACYIDLLARAGCVEDA 480
IKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSL+HYACYIDLLARAGCVEDA
Sbjct: 421 IKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCVEDA 480
Query: 481 LEVVSTMPFEPNSFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSFATD 540
LEVVSTMPFEPN+FVWSSLLRGCLLHSRFELAR+VSKKLVEVDPESSAGYVMQANSFATD
Sbjct: 481 LEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARYVSKKLVEVDPESSAGYVMQANSFATD 527
Query: 541 LQWDDVSALRWFMREKGVHKQPGRSWISVDGIVHEFFSATKSHPCVDLLYSTLSELERQM 600
LQWDDVSALRWFMREKGVHKQPGRSWIS+DG VHEFFSATKSHPCVDLLYSTLSELERQM
Sbjct: 541 LQWDDVSALRWFMREKGVHKQPGRSWISIDGTVHEFFSATKSHPCVDLLYSTLSELERQM 527
Query: 601 KLAIP 606
KL IP
Sbjct: 601 KLVIP 527
BLAST of Carg16347 vs. TAIR10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 328.2 bits (840), Expect = 1.1e-89
Identity = 199/605 (32.89%), Postives = 314/605 (51.90%), Query Frame = 0
Query: 34 LRQIHGQVFRLLKHQDNLIATRLIGH---YPHSVG----IRVFNQLLRPNIFPCNAIIRV 93
LR IH Q+ ++ H N ++LI PH G I VF + PN+ N + R
Sbjct: 49 LRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRG 108
Query: 94 LAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQVHTHVLKMGYLGD 153
A S+ A ++ + L L PN +TF F+LK+ +S +Q+H HVLK+G D
Sbjct: 109 HALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLD 168
Query: 154 SFISNALLGVYARGLKDMGSAHNMFDEMSER----------------------------- 213
++ +L+ +Y + + + AH +FD+ R
Sbjct: 169 LYVHTSLISMYVQNGR-LEDAHKVFDKSPHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 228
Query: 214 -EMACCWTPLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEK- 273
K N++P++ TMV+V+SAC++ E+ +
Sbjct: 229 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTNVRPDESTMVTVVSACAQSGSIELGRQ 288
Query: 274 ---WVAELTQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMIN 333
W+ + + F S +N L+ LY K G++E + F E + + I WN++I
Sbjct: 289 VHLWIDD-----HGFGSNLKIVN-ALIDLYSKCGELETACGLF-ERLPYKDVISWNTLIG 348
Query: 334 AYFQNGCPVEALTLFRLMLENPQCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRR 393
Y EAL LF+ ML + + PN VTM+++L ACA +G + +GR +H ++ R
Sbjct: 349 GYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYIDK--RL 408
Query: 394 GIIASNKMLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKL 453
+ + L T+LIDMY K G +E A QVF+ ++ K + S+NAMI G A++G+AD + L
Sbjct: 409 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 468
Query: 454 FSQMQESDIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLEHYACYIDLLA 513
FS+M++ I+P TF+GLLSACSHSG L+ GR IF M Y +P LEHY C IDLL
Sbjct: 469 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 528
Query: 514 RAGCVEDALEVVSTMPFEPNSFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVM 573
+G ++A E+++ M EP+ +W SLL+ C +H EL ++ L++++PE+ YV+
Sbjct: 529 HSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVL 588
Query: 574 QANSFATDLQWDDVSALRWFMREKGVHKQPGRSWISVDGIVHEFFSATKSHPCVDLLYST 598
+N +A+ +W++V+ R + +KG+ K PG S I +D +VHEF K HP +Y
Sbjct: 589 LSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGM 642
BLAST of Carg16347 vs. TAIR10
Match:
AT3G08820.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 310.5 bits (794), Expect = 2.3e-84
Identity = 184/579 (31.78%), Postives = 296/579 (51.12%), Query Frame = 0
Query: 32 SRLRQIHGQVFRLLKHQD----NLIATRLIGHYPHSVGIRVFNQLLRPNIFPCNAIIRVL 91
+ L+QIH + H D NL+ R + +F+ PNIF N++I
Sbjct: 27 NHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGF 86
Query: 92 AESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQVHTHVLKMGYLGDS 151
++ +F S+++ L + FTF +LKA R+S +H+ V+K G+ D
Sbjct: 87 VNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDV 146
Query: 152 FISNALLGVYARGLKDMGSAHNMFDEMSEREMACCWTPLIAGYAHMGLAEKALLLFVMMI 211
+LL +Y+ G + AH +FDE+ +R +
Sbjct: 147 AAMTSLLSIYS-GSGRLNDAHKLFDEIPDRS-XXXXXXXXXXXXXXXXXXXXXXXXXXXV 206
Query: 212 KENIQPEDDTMVSVLSACSKLQIAEIEKWVA----ELTQLVNEFDSCCDSINIVLVYLYG 271
+ ++P+ +V VLSAC + + +W+ E+ N F + LV LY
Sbjct: 207 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSF------VRTTLVNLYA 266
Query: 272 KWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCPVEALTLFRLMLENPQCKPNHVTM 331
K GK+EK+ F+ +V+K + W++MI Y N P E + LF ML+ KP+ ++
Sbjct: 267 KCGKMEKARSVFDSMVEK-DIVTWSTMIQGYASNSFPKEGIELFLQMLQE-NLKPDQFSI 326
Query: 332 VTVLSACAQIGDLQLGRRVHEALEHSGRRGIIASNKMLATALIDMYCKSGSLEKAKQVFH 391
V LS+CA +G L LG ++ R +N +A ALIDMY K G++ + +VF
Sbjct: 327 VGFLSSCASLGALDLGEWGISLID----RHEFLTNLFMANALIDMYAKCGAMARGFEVFK 386
Query: 392 ELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTTGTFIGLLSACSHSGFLEQ 451
E+ KD++ NA I GLA NG + +F Q ++ I P TF+GLL C H+G ++
Sbjct: 387 EMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQD 446
Query: 452 GRQIFIQMATRYSTSPSLEHYACYIDLLARAGCVEDALEVVSTMPFEPNSFVWSSLLRGC 511
G + F ++ Y+ ++EHY C +DL RAG ++DA ++ MP PN+ VW +LL GC
Sbjct: 447 GLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGC 506
Query: 512 LLHSRFELARHVSKKLVEVDPESSAGYVMQANSFATDLQWDDVSALRWFMREKGVHKQPG 571
L +LA V K+L+ ++P ++ YV +N ++ +WD+ + +R M +KG+ K PG
Sbjct: 507 RLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPG 566
Query: 572 RSWISVDGIVHEFFSATKSHPCVDLLYSTLSELERQMKL 603
SWI ++G VHEF + KSHP D +Y+ L +L +M+L
Sbjct: 567 YSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRL 591
BLAST of Carg16347 vs. TAIR10
Match:
AT3G26782.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 299.7 bits (766), Expect = 4.1e-81
Identity = 182/543 (33.52%), Postives = 302/543 (55.62%), Query Frame = 0
Query: 68 VFNQLL-RPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSS 127
+FN+ + + ++F N++I LA S S A F S+++LSL P +F +KA
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 128 HSPNVKQVHTHVLKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMACCWTPL 187
+ KQ H GY D F+S+AL+ +Y+ K + A +FDE+ +R + WT +
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGK-LEDARKVFDEIPKRNIV-SWTSM 150
Query: 188 IAGYAHMGLAEKALLLFV-MMIKENIQPEDDTM-------VSVLSACSKLQIAEIEKWVA 247
I GY G A A+ LF +++ EN +DD M VSV+SACS++ + + +
Sbjct: 151 IRGYDLNGNALDAVSLFKDLLVDEN--DDDDAMFLDSMGLVSVISACSRVPAKGLTESIH 210
Query: 248 ELTQLVNEFDSCCDSINIVL-VYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQN 307
+ FD N +L Y G G + + + F++IVDK + +NS+++ Y Q+
Sbjct: 211 SFV-IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDK-DRVSYNSIMSVYAQS 270
Query: 308 GCPVEALTLFRLMLENPQCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRRGIIAS 367
G EA +FR +++N N +T+ TVL A + G L++G+ +H+ + G +
Sbjct: 271 GMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMG----LED 330
Query: 368 NKMLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQ 427
+ ++ T++IDMYCK G +E A++ F + K+V S+ AMI G ++G A +AL+LF M
Sbjct: 331 DVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI 390
Query: 428 ESDIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLEHYACYIDLLARAGCV 487
+S ++P TF+ +L+ACSH+G +G + F M R+ P LEHY C +DLL RAG +
Sbjct: 391 DSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFL 450
Query: 488 EDALEVVSTMPFEPNSFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSF 547
+ A +++ M +P+S +WSSLL C +H ELA +L E+D + Y++ ++ +
Sbjct: 451 QKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIY 510
Query: 548 ATDLQWDDVSALRWFMREKGVHKQPGRSWISVDGIVHEFFSATKSHPCVDLLYSTLSELE 601
A +W DV +R M+ +G+ K PG S + ++G VH F + HP + +Y L+EL
Sbjct: 511 ADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELN 563
BLAST of Carg16347 vs. TAIR10
Match:
AT2G34400.1 (Pentatricopeptide repeat (PPR-like) superfamily protein)
HSP 1 Score: 295.4 bits (755), Expect = 7.8e-80
Identity = 180/564 (31.91%), Postives = 305/564 (54.08%), Query Frame = 0
Query: 24 LLQGRINSSRLRQIHGQVFRLLKHQDNLIATRLIGHYPHSVGIRVFNQLLRPNIFPCNAI 83
LL+ I+ ++LRQI Q+ + N + + + + +F+ PN + N +
Sbjct: 43 LLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYM 102
Query: 84 IRVLAES-NCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQVHTHVLKMG 143
IR L + N A S+++ +K L P+ FT++F+ A + + VH+ + K+G
Sbjct: 103 IRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVG 162
Query: 144 YLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMACCWTPLIAGYAHMGLAEKALLL 203
D I+++L+ +YA+ +G A +FDE++ER+ W +I+GY+ G A+ A+ L
Sbjct: 163 LERDVHINHSLIMMYAK-CGQVGYARKLFDEITERD-TVSWNSMISGYSEAGYAKDAMDL 222
Query: 204 FVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAELTQLVNEFDSCCDSINIVLVYLY 263
F M +E +P++ T+VS+L ACS L + + E+ + + + L+ +Y
Sbjct: 223 FRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMA--ITKKIGLSTFLGSKLISMY 282
Query: 264 GKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCPVEALTLFRLMLENPQCKPNHVT 323
GK G ++ + FN+++ K+ + W +MI Y QNG EA LF +E P+ T
Sbjct: 283 GKCGDLDSARRVFNQMI-KKDRVAWTAMITVYSQNGKSSEAFKLF-FEMEKTGVSPDAGT 342
Query: 324 MVTVLSACAQIGDLQLGRRVHEALEHSGRRGIIASNKMLATALIDMYCKSGSLEKAKQVF 383
+ TVLSAC +G L+LG+++ E + N +AT L+DMY K G +E+A +VF
Sbjct: 343 LSTVLSACGSVGALELGKQI----ETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVF 402
Query: 384 HELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTTGTFIGLLSACSHSGFLE 443
+ K+ ++NAMI A G A EAL LF +M + P+ TFIG+LSAC H+G +
Sbjct: 403 EAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVH 462
Query: 444 QGRQIFIQMATRYSTSPSLEHYACYIDLLARAGCVEDALEVVSTMPFEPNSFVWSSLLRG 503
QG + F +M++ + P +EHY IDLL+RAG +++A E + P +P+ + +++L
Sbjct: 463 QGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGA 522
Query: 504 CLLHSRFELARHVSKKLVEVDPESSAG-YVMQANSFATDLQWDDVSALRWFMREKGVHKQ 563
C + + L+E+ +AG YV+ +N A WD+ + +R MR++GV K
Sbjct: 523 CHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKT 582
Query: 564 PGRSWISVDGIVHEFFSATKSHPC 586
PG SWI ++G + EF + + C
Sbjct: 583 PGCSWIEIEGELMEFLAGSDYLQC 593
BLAST of Carg16347 vs. TAIR10
Match:
AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 292.4 bits (747), Expect = 6.6e-79
Identity = 189/610 (30.98%), Postives = 305/610 (50.00%), Query Frame = 0
Query: 30 NSSRLRQIHGQVFRLLKHQDNLIATRLIGHYPH----SVGIRVFNQLLRPNIFPCNAIIR 89
+ S+ +Q+H Q R + + A+ +I Y + + +F L P + ++IR
Sbjct: 20 SKSQAKQLHAQFIR-TQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIR 79
Query: 90 VLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQVHTHVLKMGYLG 149
+ + A + F ++ P+ F +LK+ + VH ++++G
Sbjct: 80 CFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDC 139
Query: 150 DSFISNALLGVYAR--GLKDMGSAHNMFDEMSER---------EMACCWTP--------- 209
D + NAL+ +YA+ G+ S N+FDEM +R + C P
Sbjct: 140 DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRV 199
Query: 210 --------------LIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIA 269
+IAGYA G+ E AL + M +++P+ T+ SVL S +
Sbjct: 200 FEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFS--EYV 259
Query: 270 EIEKWVAELTQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMI 329
++ K ++ + I LV +Y K +IE SE F+ + R I WNS++
Sbjct: 260 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY-CRDGISWNSLV 319
Query: 330 NAYFQNGCPVEALTLFRLMLENPQCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGR 389
Y QNG EAL LFR M+ + KP V +V+ ACA + L LG+++H +
Sbjct: 320 AGYVQNGRYNEALRLFRQMV-TAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYV----L 379
Query: 390 RGIIASNKMLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALK 449
RG SN +A+AL+DMY K G+++ A+++F + D +S+ A+IMG A++G EA+
Sbjct: 380 RGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVS 439
Query: 450 LFSQMQESDIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLEHYACYIDLL 509
LF +M+ +KP F+ +L+ACSH G +++ F M Y + LEHYA DLL
Sbjct: 440 LFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLL 499
Query: 510 ARAGCVEDALEVVSTMPFEPNSFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYV 569
RAG +E+A +S M EP VWS+LL C +H ELA V++K+ VD E+ YV
Sbjct: 500 GRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYV 559
Query: 570 MQANSFATDLQWDDVSALRWFMREKGVHKQPGRSWISVDGIVHEFFSATKSHPCVDLLYS 602
+ N +A++ +W +++ LR MR+KG+ K+P SWI + H F S +SHP +D +
Sbjct: 560 LMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINE 619
BLAST of Carg16347 vs. Swiss-Prot
Match:
sp|Q9LN01|PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 328.2 bits (840), Expect = 2.0e-88
Identity = 199/605 (32.89%), Postives = 314/605 (51.90%), Query Frame = 0
Query: 34 LRQIHGQVFRLLKHQDNLIATRLIGH---YPHSVG----IRVFNQLLRPNIFPCNAIIRV 93
LR IH Q+ ++ H N ++LI PH G I VF + PN+ N + R
Sbjct: 49 LRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRG 108
Query: 94 LAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQVHTHVLKMGYLGD 153
A S+ A ++ + L L PN +TF F+LK+ +S +Q+H HVLK+G D
Sbjct: 109 HALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLD 168
Query: 154 SFISNALLGVYARGLKDMGSAHNMFDEMSER----------------------------- 213
++ +L+ +Y + + + AH +FD+ R
Sbjct: 169 LYVHTSLISMYVQNGR-LEDAHKVFDKSPHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 228
Query: 214 -EMACCWTPLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEK- 273
K N++P++ TMV+V+SAC++ E+ +
Sbjct: 229 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTNVRPDESTMVTVVSACAQSGSIELGRQ 288
Query: 274 ---WVAELTQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMIN 333
W+ + + F S +N L+ LY K G++E + F E + + I WN++I
Sbjct: 289 VHLWIDD-----HGFGSNLKIVN-ALIDLYSKCGELETACGLF-ERLPYKDVISWNTLIG 348
Query: 334 AYFQNGCPVEALTLFRLMLENPQCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRR 393
Y EAL LF+ ML + + PN VTM+++L ACA +G + +GR +H ++ R
Sbjct: 349 GYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYIDK--RL 408
Query: 394 GIIASNKMLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKL 453
+ + L T+LIDMY K G +E A QVF+ ++ K + S+NAMI G A++G+AD + L
Sbjct: 409 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 468
Query: 454 FSQMQESDIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLEHYACYIDLLA 513
FS+M++ I+P TF+GLLSACSHSG L+ GR IF M Y +P LEHY C IDLL
Sbjct: 469 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 528
Query: 514 RAGCVEDALEVVSTMPFEPNSFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVM 573
+G ++A E+++ M EP+ +W SLL+ C +H EL ++ L++++PE+ YV+
Sbjct: 529 HSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVL 588
Query: 574 QANSFATDLQWDDVSALRWFMREKGVHKQPGRSWISVDGIVHEFFSATKSHPCVDLLYST 598
+N +A+ +W++V+ R + +KG+ K PG S I +D +VHEF K HP +Y
Sbjct: 589 LSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGM 642
BLAST of Carg16347 vs. Swiss-Prot
Match:
sp|Q9SR82|PP219_ARATH (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H84 PE=3 SV=1)
HSP 1 Score: 310.5 bits (794), Expect = 4.2e-83
Identity = 184/579 (31.78%), Postives = 296/579 (51.12%), Query Frame = 0
Query: 32 SRLRQIHGQVFRLLKHQD----NLIATRLIGHYPHSVGIRVFNQLLRPNIFPCNAIIRVL 91
+ L+QIH + H D NL+ R + +F+ PNIF N++I
Sbjct: 27 NHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGF 86
Query: 92 AESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQVHTHVLKMGYLGDS 151
++ +F S+++ L + FTF +LKA R+S +H+ V+K G+ D
Sbjct: 87 VNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDV 146
Query: 152 FISNALLGVYARGLKDMGSAHNMFDEMSEREMACCWTPLIAGYAHMGLAEKALLLFVMMI 211
+LL +Y+ G + AH +FDE+ +R +
Sbjct: 147 AAMTSLLSIYS-GSGRLNDAHKLFDEIPDRS-XXXXXXXXXXXXXXXXXXXXXXXXXXXV 206
Query: 212 KENIQPEDDTMVSVLSACSKLQIAEIEKWVA----ELTQLVNEFDSCCDSINIVLVYLYG 271
+ ++P+ +V VLSAC + + +W+ E+ N F + LV LY
Sbjct: 207 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSF------VRTTLVNLYA 266
Query: 272 KWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCPVEALTLFRLMLENPQCKPNHVTM 331
K GK+EK+ F+ +V+K + W++MI Y N P E + LF ML+ KP+ ++
Sbjct: 267 KCGKMEKARSVFDSMVEK-DIVTWSTMIQGYASNSFPKEGIELFLQMLQE-NLKPDQFSI 326
Query: 332 VTVLSACAQIGDLQLGRRVHEALEHSGRRGIIASNKMLATALIDMYCKSGSLEKAKQVFH 391
V LS+CA +G L LG ++ R +N +A ALIDMY K G++ + +VF
Sbjct: 327 VGFLSSCASLGALDLGEWGISLID----RHEFLTNLFMANALIDMYAKCGAMARGFEVFK 386
Query: 392 ELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTTGTFIGLLSACSHSGFLEQ 451
E+ KD++ NA I GLA NG + +F Q ++ I P TF+GLL C H+G ++
Sbjct: 387 EMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQD 446
Query: 452 GRQIFIQMATRYSTSPSLEHYACYIDLLARAGCVEDALEVVSTMPFEPNSFVWSSLLRGC 511
G + F ++ Y+ ++EHY C +DL RAG ++DA ++ MP PN+ VW +LL GC
Sbjct: 447 GLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGC 506
Query: 512 LLHSRFELARHVSKKLVEVDPESSAGYVMQANSFATDLQWDDVSALRWFMREKGVHKQPG 571
L +LA V K+L+ ++P ++ YV +N ++ +WD+ + +R M +KG+ K PG
Sbjct: 507 RLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPG 566
Query: 572 RSWISVDGIVHEFFSATKSHPCVDLLYSTLSELERQMKL 603
SWI ++G VHEF + KSHP D +Y+ L +L +M+L
Sbjct: 567 YSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRL 591
BLAST of Carg16347 vs. Swiss-Prot
Match:
sp|Q9LW32|PP258_ARATH (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H34 PE=2 SV=1)
HSP 1 Score: 299.7 bits (766), Expect = 7.5e-80
Identity = 182/543 (33.52%), Postives = 302/543 (55.62%), Query Frame = 0
Query: 68 VFNQLL-RPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSS 127
+FN+ + + ++F N++I LA S S A F S+++LSL P +F +KA
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 128 HSPNVKQVHTHVLKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMACCWTPL 187
+ KQ H GY D F+S+AL+ +Y+ K + A +FDE+ +R + WT +
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGK-LEDARKVFDEIPKRNIV-SWTSM 150
Query: 188 IAGYAHMGLAEKALLLFV-MMIKENIQPEDDTM-------VSVLSACSKLQIAEIEKWVA 247
I GY G A A+ LF +++ EN +DD M VSV+SACS++ + + +
Sbjct: 151 IRGYDLNGNALDAVSLFKDLLVDEN--DDDDAMFLDSMGLVSVISACSRVPAKGLTESIH 210
Query: 248 ELTQLVNEFDSCCDSINIVL-VYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQN 307
+ FD N +L Y G G + + + F++IVDK + +NS+++ Y Q+
Sbjct: 211 SFV-IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDK-DRVSYNSIMSVYAQS 270
Query: 308 GCPVEALTLFRLMLENPQCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRRGIIAS 367
G EA +FR +++N N +T+ TVL A + G L++G+ +H+ + G +
Sbjct: 271 GMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMG----LED 330
Query: 368 NKMLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQ 427
+ ++ T++IDMYCK G +E A++ F + K+V S+ AMI G ++G A +AL+LF M
Sbjct: 331 DVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI 390
Query: 428 ESDIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLEHYACYIDLLARAGCV 487
+S ++P TF+ +L+ACSH+G +G + F M R+ P LEHY C +DLL RAG +
Sbjct: 391 DSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFL 450
Query: 488 EDALEVVSTMPFEPNSFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSF 547
+ A +++ M +P+S +WSSLL C +H ELA +L E+D + Y++ ++ +
Sbjct: 451 QKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIY 510
Query: 548 ATDLQWDDVSALRWFMREKGVHKQPGRSWISVDGIVHEFFSATKSHPCVDLLYSTLSELE 601
A +W DV +R M+ +G+ K PG S + ++G VH F + HP + +Y L+EL
Sbjct: 511 ADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELN 563
BLAST of Carg16347 vs. Swiss-Prot
Match:
sp|O64705|PP184_ARATH (Pentatricopeptide repeat-containing protein At2g34400 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E23 PE=3 SV=2)
HSP 1 Score: 295.4 bits (755), Expect = 1.4e-78
Identity = 180/564 (31.91%), Postives = 305/564 (54.08%), Query Frame = 0
Query: 24 LLQGRINSSRLRQIHGQVFRLLKHQDNLIATRLIGHYPHSVGIRVFNQLLRPNIFPCNAI 83
LL+ I+ ++LRQI Q+ + N + + + + +F+ PN + N +
Sbjct: 43 LLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYM 102
Query: 84 IRVLAES-NCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQVHTHVLKMG 143
IR L + N A S+++ +K L P+ FT++F+ A + + VH+ + K+G
Sbjct: 103 IRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVG 162
Query: 144 YLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMACCWTPLIAGYAHMGLAEKALLL 203
D I+++L+ +YA+ +G A +FDE++ER+ W +I+GY+ G A+ A+ L
Sbjct: 163 LERDVHINHSLIMMYAK-CGQVGYARKLFDEITERD-TVSWNSMISGYSEAGYAKDAMDL 222
Query: 204 FVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAELTQLVNEFDSCCDSINIVLVYLY 263
F M +E +P++ T+VS+L ACS L + + E+ + + + L+ +Y
Sbjct: 223 FRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMA--ITKKIGLSTFLGSKLISMY 282
Query: 264 GKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCPVEALTLFRLMLENPQCKPNHVT 323
GK G ++ + FN+++ K+ + W +MI Y QNG EA LF +E P+ T
Sbjct: 283 GKCGDLDSARRVFNQMI-KKDRVAWTAMITVYSQNGKSSEAFKLF-FEMEKTGVSPDAGT 342
Query: 324 MVTVLSACAQIGDLQLGRRVHEALEHSGRRGIIASNKMLATALIDMYCKSGSLEKAKQVF 383
+ TVLSAC +G L+LG+++ E + N +AT L+DMY K G +E+A +VF
Sbjct: 343 LSTVLSACGSVGALELGKQI----ETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVF 402
Query: 384 HELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTTGTFIGLLSACSHSGFLE 443
+ K+ ++NAMI A G A EAL LF +M + P+ TFIG+LSAC H+G +
Sbjct: 403 EAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVH 462
Query: 444 QGRQIFIQMATRYSTSPSLEHYACYIDLLARAGCVEDALEVVSTMPFEPNSFVWSSLLRG 503
QG + F +M++ + P +EHY IDLL+RAG +++A E + P +P+ + +++L
Sbjct: 463 QGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGA 522
Query: 504 CLLHSRFELARHVSKKLVEVDPESSAG-YVMQANSFATDLQWDDVSALRWFMREKGVHKQ 563
C + + L+E+ +AG YV+ +N A WD+ + +R MR++GV K
Sbjct: 523 CHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKT 582
Query: 564 PGRSWISVDGIVHEFFSATKSHPC 586
PG SWI ++G + EF + + C
Sbjct: 583 PGCSWIEIEGELMEFLAGSDYLQC 593
BLAST of Carg16347 vs. Swiss-Prot
Match:
sp|Q9LW63|PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)
HSP 1 Score: 292.4 bits (747), Expect = 1.2e-77
Identity = 189/610 (30.98%), Postives = 305/610 (50.00%), Query Frame = 0
Query: 30 NSSRLRQIHGQVFRLLKHQDNLIATRLIGHYPH----SVGIRVFNQLLRPNIFPCNAIIR 89
+ S+ +Q+H Q R + + A+ +I Y + + +F L P + ++IR
Sbjct: 20 SKSQAKQLHAQFIR-TQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIR 79
Query: 90 VLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQVHTHVLKMGYLG 149
+ + A + F ++ P+ F +LK+ + VH ++++G
Sbjct: 80 CFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDC 139
Query: 150 DSFISNALLGVYAR--GLKDMGSAHNMFDEMSER---------EMACCWTP--------- 209
D + NAL+ +YA+ G+ S N+FDEM +R + C P
Sbjct: 140 DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRV 199
Query: 210 --------------LIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIA 269
+IAGYA G+ E AL + M +++P+ T+ SVL S +
Sbjct: 200 FEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFS--EYV 259
Query: 270 EIEKWVAELTQLVNEFDSCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMI 329
++ K ++ + I LV +Y K +IE SE F+ + R I WNS++
Sbjct: 260 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY-CRDGISWNSLV 319
Query: 330 NAYFQNGCPVEALTLFRLMLENPQCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGR 389
Y QNG EAL LFR M+ + KP V +V+ ACA + L LG+++H +
Sbjct: 320 AGYVQNGRYNEALRLFRQMV-TAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYV----L 379
Query: 390 RGIIASNKMLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALK 449
RG SN +A+AL+DMY K G+++ A+++F + D +S+ A+IMG A++G EA+
Sbjct: 380 RGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVS 439
Query: 450 LFSQMQESDIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLEHYACYIDLL 509
LF +M+ +KP F+ +L+ACSH G +++ F M Y + LEHYA DLL
Sbjct: 440 LFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLL 499
Query: 510 ARAGCVEDALEVVSTMPFEPNSFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYV 569
RAG +E+A +S M EP VWS+LL C +H ELA V++K+ VD E+ YV
Sbjct: 500 GRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYV 559
Query: 570 MQANSFATDLQWDDVSALRWFMREKGVHKQPGRSWISVDGIVHEFFSATKSHPCVDLLYS 602
+ N +A++ +W +++ LR MR+KG+ K+P SWI + H F S +SHP +D +
Sbjct: 560 LMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINE 619
BLAST of Carg16347 vs. TrEMBL
Match:
tr|A0A1S3BZG8|A0A1S3BZG8_CUCME (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495291 PE=4 SV=1)
HSP 1 Score: 1051.6 bits (2718), Expect = 6.8e-304
Identity = 516/608 (84.87%), Postives = 559/608 (91.94%), Query Frame = 0
Query: 1 MVNGKSYAMRSSCINPEFINLSDLLQGRINSSRLRQIHGQVFRLLKHQDNLIATRLIGHY 60
M+N KSYAMR +NPEFINLSDLLQGRIN+S LRQIH +VFRLLKHQDNLIATRLIGHY
Sbjct: 1 MINIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHY 60
Query: 61 PHSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
PHSVG+RVFNQL+RPNIFPCNAIIRVLAE N SFLA SIFKSLK LSLSPNDFTFSFLLK
Sbjct: 61 PHSVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLK 120
Query: 121 AFHRSSHSPNVKQVHTHVLKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMA 180
AFHRS ++ +VKQVHTHVLKMGY GDSFISNALLGVYARGLKDM SAH +FDEMS+REMA
Sbjct: 121 AFHRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMA 180
Query: 181 CCWTPLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL 240
CCWT LIAGYA MGLAEKA+L+FV MIKEN+QPEDDTMVSVLSACSK QIAEIEKWV L
Sbjct: 181 CCWTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVAL 240
Query: 241 TQLVNEFD---SCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQN 300
+LVN+FD SCCDSINIVL+YLYGKWG +EKSEEKFNEI+DK+S +VWNSMINAYFQN
Sbjct: 241 RELVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQN 300
Query: 301 GCPVEALTLFRLMLENPQCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRRGIIAS 360
G PVEALTLFRLM+ENP CKPNHVTMVTV+SACAQIGDLQLG VHE L+ SGR+GIIAS
Sbjct: 301 GFPVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIAS 360
Query: 361 NKMLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQ 420
NKMLATALIDMYCK GSLE+AK+VFH+LI KDVISFNAMIMGLAVNGK DEALKLF+QMQ
Sbjct: 361 NKMLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQ 420
Query: 421 ESDIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLEHYACYIDLLARAGCV 480
E DI+P+TGTFIGLLSACSHSGFLEQG QIFI+M T+Y SPSLEHYACYIDLLARAG
Sbjct: 421 EIDIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRF 480
Query: 481 EDALEVVSTMPFEPNSFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSF 540
EDALEVVSTMPFEPN+FVWSSLLRGCLLHS FELA++VSKKLVEVDPE+SAGYVMQANSF
Sbjct: 481 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSF 540
Query: 541 ATDLQWDDVSALRWFMREKGVHKQPGRSWISVDGIVHEFFSATKSHPCVDLLYSTLSELE 600
A+D QWDDVSALRWFMREKGVHKQPG+SWIS+DG VHEFFSATKSHP VDLLYSTL+EL+
Sbjct: 541 ASDRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELD 600
Query: 601 RQMKLAIP 606
+Q KL IP
Sbjct: 601 KQTKLVIP 608
BLAST of Carg16347 vs. TrEMBL
Match:
tr|A0A0A0K4I3|A0A0A0K4I3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071580 PE=4 SV=1)
HSP 1 Score: 1040.0 bits (2688), Expect = 2.0e-300
Identity = 508/600 (84.67%), Postives = 552/600 (92.00%), Query Frame = 0
Query: 9 MRSSCINPEFINLSDLLQGRINSSRLRQIHGQVFRLLKHQDNLIATRLIGHYPHSVGIRV 68
MR C+NPEFI+LSDLLQGRIN+S LRQIH +VFRLLKHQDNLIATRLIGHYPHSVG+RV
Sbjct: 1 MRCLCVNPEFISLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRV 60
Query: 69 FNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHS 128
FNQL+RPNIFPCNAIIRVLAE N SF A SIFK LK LSLSPNDFTFSFLLKAFHRS ++
Sbjct: 61 FNQLIRPNIFPCNAIIRVLAEHNSSFFALSIFKYLKHLSLSPNDFTFSFLLKAFHRSCNA 120
Query: 129 PNVKQVHTHVLKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMACCWTPLIA 188
NVKQVHTHVLKMGY GDSFISN+LLGVYARGLK+M SAH +FDEMS+REMACCWT LIA
Sbjct: 121 LNVKQVHTHVLKMGYFGDSFISNSLLGVYARGLKEMASAHKLFDEMSDREMACCWTSLIA 180
Query: 189 GYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAELTQLVNEFD 248
GYA MGLAEKA+LLF MM+KENIQPEDDT+VSVLSACSKLQIAEIEKWV EL QLVN+ D
Sbjct: 181 GYAQMGLAEKAMLLFFMMVKENIQPEDDTIVSVLSACSKLQIAEIEKWVVELRQLVNKCD 240
Query: 249 ---SCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCPVEALT 308
SCCDSINIVL+YLYGKWG +EKSEEKFNE+VDKRS +VWNSMINAYFQNG PVEALT
Sbjct: 241 SKRSCCDSINIVLIYLYGKWGMVEKSEEKFNEVVDKRSVLVWNSMINAYFQNGFPVEALT 300
Query: 309 LFRLMLENPQCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRRGIIASNKMLATAL 368
LFRLM+ENP CKPNHVTMVTV+SACAQIGDLQLG VHE L+ GR+GIIASNKMLAT+L
Sbjct: 301 LFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRGGRKGIIASNKMLATSL 360
Query: 369 IDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTT 428
IDMYCK GSLE+AK+VFH+LI KDVI+FNAMIMGLAVN K DEALKLF+QMQE +I P+T
Sbjct: 361 IDMYCKCGSLERAKEVFHQLINKDVITFNAMIMGLAVNSKGDEALKLFAQMQEINIIPST 420
Query: 429 GTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLEHYACYIDLLARAGCVEDALEVVS 488
GTFIGLLSACSHSGFLEQGRQIFI+M T Y SPSLEHYACYIDLLARAG +DALEV+S
Sbjct: 421 GTFIGLLSACSHSGFLEQGRQIFIEMTTHYLVSPSLEHYACYIDLLARAGHFDDALEVIS 480
Query: 489 TMPFEPNSFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSFATDLQWDD 548
TMPFEPN+FVWSSLLRGCLLHSRFELA++VSKKLVEVDPE+SAGYVMQANSFATDLQWDD
Sbjct: 481 TMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDD 540
Query: 549 VSALRWFMREKGVHKQPGRSWISVDGIVHEFFSATKSHPCVDLLYSTLSELERQMKLAIP 606
VSALRWFMREKGVHKQPG+SWIS+DG VHEFFSATKSHP VDLLY+TL+ELE+QMKL IP
Sbjct: 541 VSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYTTLNELEKQMKLVIP 600
BLAST of Carg16347 vs. TrEMBL
Match:
tr|A0A1S3C008|A0A1S3C008_CUCME (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495291 PE=4 SV=1)
HSP 1 Score: 818.1 bits (2112), Expect = 1.3e-233
Identity = 397/468 (84.83%), Postives = 431/468 (92.09%), Query Frame = 0
Query: 141 MGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMACCWTPLIAGYAHMGLAEKAL 200
MGY GDSFISNALLGVYARGLKDM SAH +FDEMS+REMACCWT LIAGYA MGLAEKA+
Sbjct: 1 MGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMACCWTSLIAGYAQMGLAEKAM 60
Query: 201 LLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAELTQLVNEFD---SCCDSINIV 260
L+FV MIKEN+QPEDDTMVSVLSACSK QIAEIEKWV L +LVN+FD SCCDSINIV
Sbjct: 61 LIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVALRELVNKFDSKSSCCDSINIV 120
Query: 261 LVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQNGCPVEALTLFRLMLENPQCK 320
L+YLYGKWG +EKSEEKFNEI+DK+S +VWNSMINAYFQNG PVEALTLFRLM+ENP CK
Sbjct: 121 LIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQNGFPVEALTLFRLMVENPHCK 180
Query: 321 PNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRRGIIASNKMLATALIDMYCKSGSLEK 380
PNHVTMVTV+SACAQIGDLQLG VHE L+ SGR+GIIASNKMLATALIDMYCK GSLE+
Sbjct: 181 PNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIASNKMLATALIDMYCKCGSLER 240
Query: 381 AKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTTGTFIGLLSACSH 440
AK+VFH+LI KDVISFNAMIMGLAVNGK DEALKLF+QMQE DI+P+TGTFIGLLSACSH
Sbjct: 241 AKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEIDIRPSTGTFIGLLSACSH 300
Query: 441 SGFLEQGRQIFIQMATRYSTSPSLEHYACYIDLLARAGCVEDALEVVSTMPFEPNSFVWS 500
SGFLEQG QIFI+M T+Y SPSLEHYACYIDLLARAG EDALEVVSTMPFEPN+FVWS
Sbjct: 301 SGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRFEDALEVVSTMPFEPNNFVWS 360
Query: 501 SLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSFATDLQWDDVSALRWFMREKG 560
SLLRGCLLHS FELA++VSKKLVEVDPE+SAGYVMQANSFA+D QWDDVSALRWFMREKG
Sbjct: 361 SLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSFASDRQWDDVSALRWFMREKG 420
Query: 561 VHKQPGRSWISVDGIVHEFFSATKSHPCVDLLYSTLSELERQMKLAIP 606
VHKQPG+SWIS+DG VHEFFSATKSHP VDLLYSTL+EL++Q KL IP
Sbjct: 421 VHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELDKQTKLVIP 468
BLAST of Carg16347 vs. TrEMBL
Match:
tr|A0A2N9J9J9|A0A2N9J9J9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61410 PE=4 SV=1)
HSP 1 Score: 766.9 bits (1979), Expect = 3.3e-218
Identity = 370/596 (62.08%), Postives = 467/596 (78.36%), Query Frame = 0
Query: 15 NPEFINLSDLLQGRINSSRLRQIHGQVFRLLKHQDNLIATRLIGHYPHSVGIRVFNQLLR 74
+P F +LS +LQ R++ S L QIH Q+ +L H NLIATRLIGHYP + ++VF+QL
Sbjct: 37 SPNFTHLSAILQARVSHSHLLQIHAQIIQLGAHHHNLIATRLIGHYPSYIALKVFHQLQN 96
Query: 75 PNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQV 134
PNIFP NAI+RVLA + AF IFK+LK+ SLSPN+F+F FLLKA RSS++ VKQ+
Sbjct: 97 PNIFPFNAIVRVLAGEGLFYHAFHIFKTLKKRSLSPNEFSFCFLLKACFRSSNAHYVKQI 156
Query: 135 HTHVLKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMACCWTPLIAGYAHMG 194
HTHV+KMG+LGD F+ N LL YA+ +KD+ SA +FDEM ++ + CCWT LIAGYA G
Sbjct: 157 HTHVVKMGFLGDPFVCNGLLAAYAKRVKDLVSARKVFDEMPDKVVVCCWTSLIAGYAQSG 216
Query: 195 LAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAELTQLVNEFD---SCC 254
E L FVMM++ N++PE+DT+VSVLSACS L+I EIEKWV LT++ FD S C
Sbjct: 217 QTEDVLQFFVMMVRLNLRPENDTLVSVLSACSNLEIVEIEKWVKILTEVGKNFDSKNSSC 276
Query: 255 DSINIVLVYLYGKWGKIEKSEEKFNEIVD--KRSAIVWNSMINAYFQNGCPVEALTLFRL 314
D++N VL+YLYGKW KIEKS E F+EIVD KRS + WN+MI AY QNGCP+EAL++FR+
Sbjct: 277 DAVNTVLIYLYGKWEKIEKSREIFDEIVDNAKRSVLPWNAMIGAYVQNGCPMEALSIFRI 336
Query: 315 MLENPQCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRRGIIASNKMLATALIDMY 374
M+E+P KPNHVTMV+VLSACAQ+GDL LGR VHE ++ G +GII SNK+LATA IDMY
Sbjct: 337 MVEDPNPKPNHVTMVSVLSACAQVGDLDLGRWVHEYMKSKGSKGIIGSNKILATAFIDMY 396
Query: 375 CKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTTGTFI 434
K GSLE+AK+VF +++ KDV+SFNAMIMGLAVNG+ +EAL+LFS+M+E ++P GTF+
Sbjct: 397 SKCGSLERAKEVFDQMVSKDVVSFNAMIMGLAVNGEGEEALRLFSKMREFGLQPNAGTFL 456
Query: 435 GLLSACSHSGFLEQGRQIFIQMATRYSTSPSLEHYACYIDLLARAGCVEDALEVVSTMPF 494
G+L AC HSG E+GRQIF+ M +R+S SP LEHYACYIDLLAR G VE+ALEVV +MPF
Sbjct: 457 GVLCACCHSGLAEKGRQIFVDMTSRFSVSPKLEHYACYIDLLARVGLVEEALEVVFSMPF 516
Query: 495 EPNSFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSFATDLQWDDVSAL 554
EPN FVWS+LL GCLLHSR ELAR+VS++LVEVDP++SAGYVM AN+FA + +W VS L
Sbjct: 517 EPNKFVWSALLGGCLLHSRIELARYVSRRLVEVDPDNSAGYVMLANAFAVNRRWGGVSDL 576
Query: 555 RWFMREKGVHKQPGRSWISVDGIVHEFFSATKSHPCVDLLYSTLSELERQMKLAIP 606
RW M+EKG+ KQPGRSWIS++G+VHEF + SHP + + TL+ L +QMK A P
Sbjct: 577 RWLMKEKGIKKQPGRSWISINGVVHEFLVGSPSHPQIKSIDHTLNGLVKQMKEASP 632
BLAST of Carg16347 vs. TrEMBL
Match:
tr|A0A251MXL1|A0A251MXL1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G138100 PE=4 SV=1)
HSP 1 Score: 761.1 bits (1964), Expect = 1.8e-216
Identity = 369/588 (62.76%), Postives = 470/588 (79.93%), Query Frame = 0
Query: 20 NLSDLLQGRINSSRLRQIHGQVFRLLKHQDNLIATRLIGHYPHSVGIRVFNQLLRPNIFP 79
+L+ LQGRI+ RL QIH QVF++ QDNLIATRLIGHYP + +RVF+QL +PNIFP
Sbjct: 38 DLAASLQGRISYPRLLQIHAQVFQVGAQQDNLIATRLIGHYPSHLALRVFHQLQKPNIFP 97
Query: 80 CNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLKAFHRSSHSPNVKQVHTHVL 139
NAIIRV AE AFS+FKSLK+ SLSPNDFTFSFLLKA RS +S VKQ+HTHV+
Sbjct: 98 FNAIIRVFAEEGLFSDAFSLFKSLKQTSLSPNDFTFSFLLKACFRSQNSRYVKQIHTHVM 157
Query: 140 KMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMACCWTPLIAGYAHMGLAEKA 199
KMG+L +SF+ +LL VYA+GLKD+GSA +FDEM E+ + CCWT LIAGYA G +E+
Sbjct: 158 KMGFLCNSFVCASLLAVYAKGLKDLGSARLVFDEMPEKSIVCCWTSLIAGYALSGQSEQV 217
Query: 200 LLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAELTQLVNEFDS---CCDSINI 259
L LF+MM+ EN++PEDDTMVSVLSACS L I +IEKWV L+++V+ D+ CDS+N
Sbjct: 218 LRLFLMMVDENLRPEDDTMVSVLSACSNLDIVDIEKWVTILSKVVSNVDAKKFGCDSVNT 277
Query: 260 VLVYLYGKWGKIEKSEEKFNEIVD--KRSAIVWNSMINAYFQNGCPVEALTLFRLMLENP 319
LVYLYGKWGK+EKS ++F++I D K+S + WN+MI A+ QNG P+E+L+LFR+M+E+P
Sbjct: 278 ALVYLYGKWGKVEKSRDRFDQISDNGKQSVLPWNAMIGAFVQNGFPMESLSLFRVMVEDP 337
Query: 320 QCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRRGIIASNKMLATALIDMYCKSGS 379
+ +PNHVTMV+VLSACAQIGDL LGR VHE L+ G +G+I SN++LATALIDMY K GS
Sbjct: 338 KYRPNHVTMVSVLSACAQIGDLDLGRWVHEYLKSKGSKGVIGSNRILATALIDMYSKCGS 397
Query: 380 LEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQESDIKPTTGTFIGLLSA 439
LE+AK+VF +++ KD++SFNAMIMGLAVN + +EAL+LFS++QE ++P GTF+G L A
Sbjct: 398 LERAKEVFDQMVSKDIVSFNAMIMGLAVNSEGEEALRLFSRIQEFGLQPNAGTFLGALCA 457
Query: 440 CSHSGFLEQGRQIFIQMATRYSTSPSLEHYACYIDLLARAGCVEDALEVVSTMPFEPNSF 499
CSHSG E+GRQIF M + +S S LEHYACY+DLLAR G VE+ALEVV++MPFEPNSF
Sbjct: 458 CSHSGLSEEGRQIFNDMTSSFSVSSKLEHYACYVDLLARVGLVEEALEVVTSMPFEPNSF 517
Query: 500 VWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSFATDLQWDDVSALRWFMR 559
VW +LL GCLLHSR +LA++VS KLV DP++S GY+M AN+FA+D +W DVSALRW MR
Sbjct: 518 VWGALLGGCLLHSRVDLAQYVSNKLVRSDPDNSGGYIMLANAFASDRRWGDVSALRWVMR 577
Query: 560 EKGVHKQPGRSWISVDGIVHEFFSATKSHPCVDLLYSTLSELERQMKL 603
EKGV+KQPG SWIS+DG+VHEF SHP ++ +Y+TL L ++MK+
Sbjct: 578 EKGVNKQPGCSWISIDGVVHEFLVGCPSHPQIESIYNTLVGLVKEMKI 625
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022952095.1 | 0.0e+00 | 97.85 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor... | [more] |
| XP_022972521.1 | 0.0e+00 | 96.53 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucur... | [more] |
| XP_008455016.1 | 1.0e-303 | 84.87 | PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-... | [more] |
| KGN43869.1 | 3.1e-300 | 84.67 | hypothetical protein Csa_7G071580 [Cucumis sativus] | [more] |
| XP_022952096.1 | 4.9e-290 | 84.96 | pentatricopeptide repeat-containing protein At3g29230-like isoform X2 [Cucurbita... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G08070.1 | 1.1e-89 | 32.89 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G08820.1 | 2.3e-84 | 31.78 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G26782.1 | 4.1e-81 | 33.52 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT2G34400.1 | 7.8e-80 | 31.91 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
| AT3G23330.1 | 6.6e-79 | 30.98 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
