BLAST of Lsi03G005580 vs. Swiss-Prot
Match:
PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 355.1 bits (910), Expect = 1.5e-96
Identity = 217/625 (34.72%), Postives = 342/625 (54.72%), Query Frame = 1
Query: 15 NPESVNLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHS------VGLRV 74
N S ++S L++ ++ L+Q H + R D A++L S +V
Sbjct: 28 NERSRHIS-LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKV 87
Query: 75 FNQLIRPNIFPCNAIIRVLAQHNSSFLPFSIFKSLKHLSLS---PNDFTFSFLLKAFHRS 134
F+++ +PN F N +IR A L SI+ L +S S PN +TF FL+KA
Sbjct: 88 FDEIPKPNSFAWNTLIRAYASGPDPVL--SIWAFLDMVSESQCYPNKYTFPFLIKAAAEV 147
Query: 135 SHALNVKQIHTHVLKMGYLGDSFISNALLAVYARSLKDMASAHKLFDEMSDRDMACCWTS 194
S + +H +K D F++N+L+ Y S D+ SA K+F + ++D+ W S
Sbjct: 148 SSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYF-SCGDLDSACKVFTTIKEKDVVS-WNS 207
Query: 195 LIAGYAQKGLAEKGLLLFVMMIKENMQPEDDTMVSVLSACSKFQ--------ISEIEKWV 254
+I G+ QKG +K L LF M E+++ TMV VLSAC+K + S IE+
Sbjct: 208 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR 267
Query: 255 VELR-QLVNKFDSKSSCCDSI--------------NIVLIYLYGKWGMIEKSE---EKFN 314
V + L N + C SI N+ + + + E E E N
Sbjct: 268 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 327
Query: 315 EIVDKRSVLVWNSMINAYFQNGCPVEALTLFRLMVENSHCKPNHVTMVTVLSACAQIGDL 374
+ K ++ WN++I+AY QNG P EAL +F + + K N +T+V+ LSACAQ+G L
Sbjct: 328 SMPQK-DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGAL 387
Query: 375 QLGCWVHEVLEHGGRSGIIASNKMLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAM 434
+LG W+H ++ G I N + +ALI MY KCG LE+++EVF+ + +DV ++AM
Sbjct: 388 ELGRWIHSYIKKHG----IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAM 447
Query: 435 IMGLAVNGKGDEALKLFAQMQEVDIRPTTGTFIGLLSACSHSGFLEQGHQIFIQMTTRYL 494
I GLA++G G+EA+ +F +MQE +++P TF + ACSH+G +++ +F QM + Y
Sbjct: 448 IGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYG 507
Query: 495 ILPSLEHYACYIDLLARAGHFENALAVISTMPFEPNNFVWSSLLRGCLLHSRFELAQYVS 554
I+P +HYAC +D+L R+G+ E A+ I MP P+ VW +LL C +H+ LA+
Sbjct: 508 IVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMAC 567
Query: 555 KRLVEVDPENSAGYVMQANSFARDLQWDGASALRWFMREKGVHKQPGQSWISIDGIVHEF 605
RL+E++P N +V+ +N +A+ +W+ S LR MR G+ K+PG S I IDG++HEF
Sbjct: 568 TRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEF 627
BLAST of Lsi03G005580 vs. Swiss-Prot
Match:
PP219_ARATH (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1)
HSP 1 Score: 346.3 bits (887), Expect = 6.9e-94
Identity = 199/583 (34.13%), Postives = 315/583 (54.03%), Query Frame = 1
Query: 32 SHLRQIHARVFRLLKHQD----NLIATRLIGHYPHSVGLRVFNQLIRPNIFPCNAIIRVL 91
+HL+QIH + H D NL+ R + +F+ PNIF N++I
Sbjct: 27 NHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGF 86
Query: 92 AQHNSSFLPFSIFKSLKHLSLSPNDFTFSFLLKAFHRSSHALNVKQIHTHVLKMGYLGDS 151
++ +F S++ L + FTF +LKA R+S +H+ V+K G+ D
Sbjct: 87 VNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDV 146
Query: 152 FISNALLAVYARSLKDMASAHKLFDEMSDRDMACCWTSLIAGYAQKGLAEKGLLLFVMMI 211
+LL++Y+ S + + AHKLFDE+ DR + WT+L +GY G + + LF M+
Sbjct: 147 AAMTSLLSIYSGSGR-LNDAHKLFDEIPDRSVVT-WTALFSGYTTSGRHREAIDLFKKMV 206
Query: 212 KENMQPEDDTMVSVLSACSKFQISEIEKWVV----ELRQLVNKFDSKSSCCDSINIVLIY 271
+ ++P+ +V VLSAC + +W+V E+ N F + L+
Sbjct: 207 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSF---------VRTTLVN 266
Query: 272 LYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGCPVEALTLFRLMVENSHCKPNH 331
LY K G +EK+ F+ +V+K ++ W++MI Y N P E + LF M++ + KP+
Sbjct: 267 LYAKCGKMEKARSVFDSMVEK-DIVTWSTMIQGYASNSFPKEGIELFLQMLQEN-LKPDQ 326
Query: 332 VTMVTVLSACAQIGDLQLGCWVHEVLEHGGRSGIIASNKMLATALIDMYCKCGSLERAKE 391
++V LS+CA +G L LG W +++ +N +A ALIDMY KCG++ R E
Sbjct: 327 FSIVGFLSSCASLGALDLGEWGISLIDRHE----FLTNLFMANALIDMYAKCGAMARGFE 386
Query: 392 VFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEVDIRPTTGTFIGLLSACSHSGF 451
VF ++ KD++ NA I GLA NG + +F Q +++ I P TF+GLL C H+G
Sbjct: 387 VFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGL 446
Query: 452 LEQGHQIFIQMTTRYLILPSLEHYACYIDLLARAGHFENALAVISTMPFEPNNFVWSSLL 511
++ G + F ++ Y + ++EHY C +DL RAG ++A +I MP PN VW +LL
Sbjct: 447 IQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALL 506
Query: 512 RGCLLHSRFELAQYVSKRLVEVDPENSAGYVMQANSFARDLQWDGASALRWFMREKGVHK 571
GC L +LA+ V K L+ ++P N+ YV +N ++ +WD A+ +R M +KG+ K
Sbjct: 507 SGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKK 566
Query: 572 QPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNELEKQMKLV 607
PG SWI ++G VHEF + KSHP D +Y L +L +M+L+
Sbjct: 567 IPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLM 592
BLAST of Lsi03G005580 vs. Swiss-Prot
Match:
PP261_ARATH (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1)
HSP 1 Score: 333.6 bits (854), Expect = 4.6e-90
Identity = 189/576 (32.81%), Postives = 317/576 (55.03%), Query Frame = 1
Query: 30 NNSHLRQIHARVFRLLKHQDNLIATRLIGHYP----HSVGLRVFNQLIRPNIFPCNAIIR 89
N + ++Q+HA++ R H+D IA +LI ++ +RVFNQ+ PN+ CN++IR
Sbjct: 31 NLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIR 90
Query: 90 VLAQHNSSFLPFSIFKSLKHLSLSPNDFTFSFLLKAFHRSSHALNVKQIHTHVLKMGYLG 149
AQ++ + F +F ++ L ++FT+ FLLKA S VK +H H+ K+G
Sbjct: 91 AHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSS 150
Query: 150 DSFISNALLAVYAR-SLKDMASAHKLFDEMSDRDMACCWTSLIAGYAQKGLAEKGLLLFV 209
D ++ NAL+ Y+R + A KLF++MS+RD W S++ G + G LF
Sbjct: 151 DIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVS-WNSMLGGLVKAGELRDARRLFD 210
Query: 210 MMIKENMQPEDDTMVSVLSACSKFQISEIEKWVVELRQLVNKFDSKSSCCDSINIVLIYL 269
M + ++ + TM+ + C + + +L K +++ S ++
Sbjct: 211 EMPQRDLISWN-TMLDGYARCREMS---------KAFELFEKMPERNTVSWS---TMVMG 270
Query: 270 YGKWGMIEKSEEKFNEI-VDKRSVLVWNSMINAYFQNGCPVEALTLFRLMVENSHCKPNH 329
Y K G +E + F+++ + ++V+ W +I Y + G EA L MV S K +
Sbjct: 271 YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVA-SGLKFDA 330
Query: 330 VTMVTVLSACAQIGDLQLGCWVHEVLEHGGRSGIIASNKMLATALIDMYCKCGSLERAKE 389
++++L+AC + G L LG +H +L+ + SN + AL+DMY KCG+L++A +
Sbjct: 331 AAVISILAACTESGLLSLGMRIHSILKRSN----LGSNAYVLNALLDMYAKCGNLKKAFD 390
Query: 390 VFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEVDIRPTTGTFIGLLSACSHSGF 449
VF+ + KD++S+N M+ GL V+G G EA++LF++M+ IRP TFI +L +C+H+G
Sbjct: 391 VFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGL 450
Query: 450 LEQGHQIFIQMTTRYLILPSLEHYACYIDLLARAGHFENALAVISTMPFEPNNFVWSSLL 509
+++G F M Y ++P +EHY C +DLL R G + A+ V+ TMP EPN +W +LL
Sbjct: 451 IDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALL 510
Query: 510 RGCLLHSRFELAQYVSKRLVEVDPENSAGYVMQANSFARDLQWDGASALRWFMREKGVHK 569
C +H+ ++A+ V LV++DP + Y + +N +A W+G + +R M+ GV K
Sbjct: 511 GACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEK 570
Query: 570 QPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNEL 600
G S + ++ +HEF KSHP D +Y L L
Sbjct: 571 PSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
BLAST of Lsi03G005580 vs. Swiss-Prot
Match:
PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1)
HSP 1 Score: 333.6 bits (854), Expect = 4.6e-90
Identity = 197/590 (33.39%), Postives = 331/590 (56.10%), Query Frame = 1
Query: 22 SDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVG-----LRVFNQLIRPN 81
+ L+ + + L+QIHAR+ L + T+LI H S G +VF+ L RP
Sbjct: 25 ASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLI-HASSSFGDITFARQVFDDLPRPQ 84
Query: 82 IFPCNAIIRVLAQHNSSFLPFSIFKSLKHLSLSPNDFTFSFLLKAFHRSSHALNVKQIHT 141
IFP NAIIR +++N ++ +++ +SP+ FTF LLKA SH + +H
Sbjct: 85 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 144
Query: 142 HVLKMGYLGDSFISNALLAVYARSLKDMASAHKLFD--EMSDRDMACCWTSLIAGYAQKG 201
V ++G+ D F+ N L+A+YA+ + + SA +F+ + +R + WT++++ YAQ G
Sbjct: 145 QVFRLGFDADVFVQNGLIALYAKCRR-LGSARTVFEGLPLPERTIVS-WTAIVSAYAQNG 204
Query: 202 LAEKGLLLFVMMIKENMQPEDDTMVSVLSACSKFQISEIEKWVVELRQLVNKFDSKSSCC 261
+ L +F M K +++P+ +VSVL+A F + K + V K +
Sbjct: 205 EPMEALEIFSQMRKMDVKPDWVALVSVLNA---FTCLQDLKQGRSIHASVVKMGLEIE-- 264
Query: 262 DSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGCPVEALTLFRLMV 321
+ I L +Y K G + ++ F++ + ++++WN+MI+ Y +NG EA+ +F M+
Sbjct: 265 PDLLISLNTMYAKCGQVATAKILFDK-MKSPNLILWNAMISGYAKNGYAREAIDMFHEMI 324
Query: 322 ENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLEHGGRSGIIASNKMLATALIDMYCK 381
N +P+ +++ + +SACAQ+G L+ + E+ GRS + +++ALIDM+ K
Sbjct: 325 -NKDVRPDTISITSAISACAQVGSLE---QARSMYEYVGRSD-YRDDVFISSALIDMFAK 384
Query: 382 CGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEVDIRPTTGTFIGL 441
CGS+E A+ VF + +++DV+ ++AMI+G ++G+ EA+ L+ M+ + P TF+GL
Sbjct: 385 CGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGL 444
Query: 442 LSACSHSGFLEQGHQIFIQMTTRYLILPSLEHYACYIDLLARAGHFENALAVISTMPFEP 501
L AC+HSG + +G F +M + I P +HYAC IDLL RAGH + A VI MP +P
Sbjct: 445 LMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQP 504
Query: 502 NNFVWSSLLRGCLLHSRFELAQYVSKRLVEVDPENSAGYVMQANSFARDLQWDGASALRW 561
VW +LL C H EL +Y +++L +DP N+ YV +N +A WD + +R
Sbjct: 505 GVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRV 564
Query: 562 FMREKGVHKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNELEKQMK 605
M+EKG++K G SW+ + G + F KSHP + + + +E ++K
Sbjct: 565 RMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLK 599
BLAST of Lsi03G005580 vs. Swiss-Prot
Match:
PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 323.9 bits (829), Expect = 3.7e-87
Identity = 206/607 (33.94%), Postives = 318/607 (52.39%), Query Frame = 1
Query: 34 LRQIHARVFRLLKHQDNLIATRLIGHY---PHSVGL----RVFNQLIRPNIFPCNAIIRV 93
LR IHA++ ++ H N ++LI PH GL VF + PN+ N + R
Sbjct: 49 LRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRG 108
Query: 94 LAQH--------------------NSSFLPFSIFKSLKHLSLSPNDFTFSFLLKA----- 153
A NS PF + K + +LK
Sbjct: 109 HALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLD 168
Query: 154 --FHRSSHALNVKQIHTH----VLKMGYLGDSFISNALLAVYARSLKDMASAHKLFDEMS 213
H S ++ V+ V D AL+ YA S + +A KLFDE+
Sbjct: 169 LYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYA-SRGYIENAQKLFDEIP 228
Query: 214 DRDMACCWTSLIAGYAQKGLAEKGLLLFVMMIKENMQPEDDTMVSVLSACSKFQISEIEK 273
+D+ W ++I+GYA+ G ++ L LF M+K N++P++ TMV+V+SAC+ +
Sbjct: 229 VKDVVS-WNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA-------QS 288
Query: 274 WVVELRQLVNKFDSKSSCCDSINIV--LIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSM 333
+EL + V+ + ++ IV LI LY K G +E + F E + + V+ WN++
Sbjct: 289 GSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF-ERLPYKDVISWNTL 348
Query: 334 INAYFQNGCPVEALTLFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLEHGG 393
I Y EAL LF+ M+ + PN VTM+++L ACA +G + +G W+H ++
Sbjct: 349 IGGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYIDK-- 408
Query: 394 RSGIIASNKMLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEAL 453
R + + L T+LIDMY KCG +E A +VF+ +++K + S+NAMI G A++G+ D +
Sbjct: 409 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 468
Query: 454 KLFAQMQEVDIRPTTGTFIGLLSACSHSGFLEQGHQIFIQMTTRYLILPSLEHYACYIDL 513
LF++M+++ I+P TF+GLLSACSHSG L+ G IF MT Y + P LEHY C IDL
Sbjct: 469 DLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDL 528
Query: 514 LARAGHFENALAVISTMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKRLVEVDPENSAGY 573
L +G F+ A +I+ M EP+ +W SLL+ C +H EL + ++ L++++PEN Y
Sbjct: 529 LGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSY 588
Query: 574 VMQANSFARDLQWDGASALRWFMREKGVHKQPGQSWISIDGIVHEFFSATKSHPYVDLLY 601
V+ +N +A +W+ + R + +KG+ K PG S I ID +VHEF K HP +Y
Sbjct: 589 VLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 642
BLAST of Lsi03G005580 vs. TrEMBL
Match:
A0A0A0K4I3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071580 PE=4 SV=1)
HSP 1 Score: 1111.7 bits (2874), Expect = 0.0e+00
Identity = 541/600 (90.17%), Postives = 568/600 (94.67%), Query Frame = 1
Query: 9 MRSLCVNPESVNLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRV 68
MR LCVNPE ++LSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRV
Sbjct: 1 MRCLCVNPEFISLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRV 60
Query: 69 FNQLIRPNIFPCNAIIRVLAQHNSSFLPFSIFKSLKHLSLSPNDFTFSFLLKAFHRSSHA 128
FNQLIRPNIFPCNAIIRVLA+HNSSF SIFK LKHLSLSPNDFTFSFLLKAFHRS +A
Sbjct: 61 FNQLIRPNIFPCNAIIRVLAEHNSSFFALSIFKYLKHLSLSPNDFTFSFLLKAFHRSCNA 120
Query: 129 LNVKQIHTHVLKMGYLGDSFISNALLAVYARSLKDMASAHKLFDEMSDRDMACCWTSLIA 188
LNVKQ+HTHVLKMGY GDSFISN+LL VYAR LK+MASAHKLFDEMSDR+MACCWTSLIA
Sbjct: 121 LNVKQVHTHVLKMGYFGDSFISNSLLGVYARGLKEMASAHKLFDEMSDREMACCWTSLIA 180
Query: 189 GYAQKGLAEKGLLLFVMMIKENMQPEDDTMVSVLSACSKFQISEIEKWVVELRQLVNKFD 248
GYAQ GLAEK +LLF MM+KEN+QPEDDT+VSVLSACSK QI+EIEKWVVELRQLVNK D
Sbjct: 181 GYAQMGLAEKAMLLFFMMVKENIQPEDDTIVSVLSACSKLQIAEIEKWVVELRQLVNKCD 240
Query: 249 SKSSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGCPVEALT 308
SK SCCDSINIVLIYLYGKWGM+EKSEEKFNE+VDKRSVLVWNSMINAYFQNG PVEALT
Sbjct: 241 SKRSCCDSINIVLIYLYGKWGMVEKSEEKFNEVVDKRSVLVWNSMINAYFQNGFPVEALT 300
Query: 309 LFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLEHGGRSGIIASNKMLATAL 368
LFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+ GGR GIIASNKMLAT+L
Sbjct: 301 LFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRGGRKGIIASNKMLATSL 360
Query: 369 IDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEVDIRPTT 428
IDMYCKCGSLERAKEVFHQLINKDVI+FNAMIMGLAVN KGDEALKLFAQMQE++I P+T
Sbjct: 361 IDMYCKCGSLERAKEVFHQLINKDVITFNAMIMGLAVNSKGDEALKLFAQMQEINIIPST 420
Query: 429 GTFIGLLSACSHSGFLEQGHQIFIQMTTRYLILPSLEHYACYIDLLARAGHFENALAVIS 488
GTFIGLLSACSHSGFLEQG QIFI+MTT YL+ PSLEHYACYIDLLARAGHF++AL VIS
Sbjct: 421 GTFIGLLSACSHSGFLEQGRQIFIEMTTHYLVSPSLEHYACYIDLLARAGHFDDALEVIS 480
Query: 489 TMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKRLVEVDPENSAGYVMQANSFARDLQWDG 548
TMPFEPNNFVWSSLLRGCLLHSRFELAQYVSK+LVEVDPENSAGYVMQANSFA DLQWD
Sbjct: 481 TMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDD 540
Query: 549 ASALRWFMREKGVHKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNELEKQMKLVIP 608
SALRWFMREKGVHKQPGQSWISIDG VHEFFSATKSHPYVDLLY TLNELEKQMKLVIP
Sbjct: 541 VSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYTTLNELEKQMKLVIP 600
BLAST of Lsi03G005580 vs. TrEMBL
Match:
M5W238_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021613mg PE=4 SV=1)
HSP 1 Score: 751.9 bits (1940), Expect = 6.1e-214
Identity = 364/581 (62.65%), Postives = 455/581 (78.31%), Query Frame = 1
Query: 27 GRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRVFNQLIRPNIFPCNAIIRV 86
GRI+ L QIHA+VF++ QDNLIATRLIGHYP + LRVF+QL +PNIFP NAIIRV
Sbjct: 60 GRISYPRLLQIHAQVFQVGAQQDNLIATRLIGHYPSHLALRVFHQLQKPNIFPFNAIIRV 119
Query: 87 LAQHNSSFLPFSIFKSLKHLSLSPNDFTFSFLLKAFHRSSHALNVKQIHTHVLKMGYLGD 146
A+ FS+FKSLK SLSPNDFTFSFLLKA RS ++ VKQIHTHV+KMG+L +
Sbjct: 120 FAEEGLFSDAFSLFKSLKQTSLSPNDFTFSFLLKACFRSQNSRYVKQIHTHVMKMGFLCN 179
Query: 147 SFISNALLAVYARSLKDMASAHKLFDEMSDRDMACCWTSLIAGYAQKGLAEKGLLLFVMM 206
SF+ +LLAVYA+ LKD+ SA +FDEM ++ + CCWTSLIAGYA G +E+ L LF+MM
Sbjct: 180 SFVCASLLAVYAKGLKDLGSARLVFDEMPEKSIVCCWTSLIAGYALSGQSEQVLRLFLMM 239
Query: 207 IKENMQPEDDTMVSVLSACSKFQISEIEKWVVELRQLVNKFDSKSSCCDSINIVLIYLYG 266
+ EN++PEDDTMVSVLSACS I +IEKWV L ++V+ D+K CDS+N L+YLYG
Sbjct: 240 VDENLRPEDDTMVSVLSACSNLDIVDIEKWVTILSKVVSNVDAKKFGCDSVNTALVYLYG 299
Query: 267 KWGMIEKSEEKFNEIVD--KRSVLVWNSMINAYFQNGCPVEALTLFRLMVENSHCKPNHV 326
KWG +EKS ++F++I D K+SVL WN+MI A+ QNG P+E+L+LFR+MVE+ +PNHV
Sbjct: 300 KWGKVEKSRDRFDQISDNGKQSVLPWNAMIGAFVQNGFPMESLSLFRVMVEDPKYRPNHV 359
Query: 327 TMVTVLSACAQIGDLQLGCWVHEVLEHGGRSGIIASNKMLATALIDMYCKCGSLERAKEV 386
TMV+VLSACAQIGDL LG WVHE L+ G G+I SN++LATALIDMY KCGSLERAKEV
Sbjct: 360 TMVSVLSACAQIGDLDLGRWVHEYLKSKGSKGVIGSNRILATALIDMYSKCGSLERAKEV 419
Query: 387 FHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEVDIRPTTGTFIGLLSACSHSGFL 446
F Q+++KD++SFNAMIMGLAVN +G+EAL+LF+++QE ++P GTF+G L ACSHSG
Sbjct: 420 FDQMVSKDIVSFNAMIMGLAVNSEGEEALRLFSRIQEFGLQPNAGTFLGALCACSHSGLS 479
Query: 447 EQGHQIFIQMTTRYLILPSLEHYACYIDLLARAGHFENALAVISTMPFEPNNFVWSSLLR 506
E+G QIF MT+ + + LEHYACY+DLLAR G E AL V+++MPFEPN+FVW +LL
Sbjct: 480 EEGRQIFNDMTSSFSVSSKLEHYACYVDLLARVGLVEEALEVVTSMPFEPNSFVWGALLG 539
Query: 507 GCLLHSRFELAQYVSKRLVEVDPENSAGYVMQANSFARDLQWDGASALRWFMREKGVHKQ 566
GCLLHSR +LAQYVS +LV DP+NS GY+M AN+FA D +W SALRW MREKGV+KQ
Sbjct: 540 GCLLHSRVDLAQYVSNKLVRSDPDNSGGYIMLANAFASDRRWGDVSALRWVMREKGVNKQ 599
Query: 567 PGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNELEKQMKL 606
PG SWISIDG+VHEF SHP ++ +YNTL L K+MK+
Sbjct: 600 PGCSWISIDGVVHEFLVGCPSHPQIESIYNTLVGLVKEMKI 640
BLAST of Lsi03G005580 vs. TrEMBL
Match:
A0A061E036_THECC (Pentatricopeptide repeat-containing protein OS=Theobroma cacao GN=TCM_007174 PE=4 SV=1)
HSP 1 Score: 748.0 bits (1930), Expect = 8.7e-213
Identity = 366/591 (61.93%), Postives = 457/591 (77.33%), Query Frame = 1
Query: 20 NLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRVFNQLIRPNIFP 79
NLS LLQGRI +SHLRQIHAR+FRL HQDNL+ATRLIGHYP S LRVFNQL PNIFP
Sbjct: 57 NLSLLLQGRILHSHLRQIHARIFRLNAHQDNLVATRLIGHYPSSFALRVFNQLHNPNIFP 116
Query: 80 CNAIIRVLAQHNSSFLPFSIFKSLKHLSLSPNDFTFSFLLKAFHRSSHALNVKQIHTHVL 139
NAIIRVLA++ FL S F +L SLSPND TFSFLLKA S+ A V QIHT+++
Sbjct: 117 FNAIIRVLAENGLFFLACSFFNNLIQRSLSPNDLTFSFLLKACFLSNDAQYVNQIHTYII 176
Query: 140 KMGYLGDSFISNALLAVYARSLKDMASAHKLFDEMSDRDMACCWTSLIAGYAQKGLAEKG 199
K+GYL D + N LL+VYA+ KD+ASAHKLFDEM ++ WT+LIA YA+ G E+
Sbjct: 177 KLGYLCDPTVCNGLLSVYAQGFKDVASAHKLFDEMPEKVSVTPWTNLIACYARSGRNEEV 236
Query: 200 LLLFVMMIKENMQPEDDTMVSVLSACSKFQISEIEKWVVELRQLVNKFDSKSSCCDSINI 259
L LF MI++N++PE+DTMVSVLSACS +I +IEKWV L ++++ D+K DS+NI
Sbjct: 237 LRLFCSMIEKNLRPENDTMVSVLSACSSAEIFDIEKWVTILSEIIHNSDNKIPNRDSVNI 296
Query: 260 VLIYLYGKWGMIEKSEEKFNEI--VDKRSVLVWNSMINAYFQNGCPVEALTLFRLMVENS 319
LIYLYG+ +EKS E+FNEI + K SV+ WN+MI AY QNGCP+EAL+LF LM+E+S
Sbjct: 297 ALIYLYGRLENVEKSRERFNEIYAIGKMSVIPWNAMIGAYVQNGCPMEALSLFHLMMEDS 356
Query: 320 HCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLEHGGRSGIIASNKMLATALIDMYCKCGS 379
+C+PNHVTMV+VLSACAQ+GDL LG WVH+ LE+ GR G++ +N LATALIDMY KCG
Sbjct: 357 NCRPNHVTMVSVLSACAQMGDLDLGKWVHQYLEYNGRKGVLETNTFLATALIDMYSKCGD 416
Query: 380 LERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEVDIRPTTGTFIGLLSA 439
LE AK VF Q+I+KDV+SFNAMIMGLA+NG+G+EA+ L +++QE+ + P GTF+GLL A
Sbjct: 417 LEMAKRVFDQMISKDVVSFNAMIMGLAMNGEGEEAVSLLSKVQELGLHPNAGTFLGLLCA 476
Query: 440 CSHSGFLEQGHQIFIQMTTRYLILPSLEHYACYIDLLARAGHFENALAVISTMPFEPNNF 499
CSHSG E+G QIF++M +R+ + P LEHYACYID+LAR G E AL V+ +MP+EPNNF
Sbjct: 477 CSHSGLSEEGRQIFLEMNSRFSVYPRLEHYACYIDILARVGLVEAALTVVDSMPYEPNNF 536
Query: 500 VWSSLLRGCLLHSRFELAQYVSKRLVEVDPENSAGYVMQANSFARDLQWDGASALRWFMR 559
VW +LL GC+LHSR +LAQ V K+LVEVDP+NS GYVM AN+ A D +W+ S LRW MR
Sbjct: 537 VWGALLGGCVLHSRADLAQKVYKKLVEVDPQNSGGYVMLANTLAVDHRWNDVSVLRWLMR 596
Query: 560 EKGVHKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNELEKQMKLVIP 609
EKGV KQPG SWISIDG+VHEF + + SHP ++ +Y+TLN L MK+ P
Sbjct: 597 EKGVKKQPGHSWISIDGVVHEFLAGSPSHPKMESIYHTLNGLVNVMKVTSP 647
BLAST of Lsi03G005580 vs. TrEMBL
Match:
F6H681_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g00370 PE=4 SV=1)
HSP 1 Score: 744.6 bits (1921), Expect = 9.7e-212
Identity = 358/584 (61.30%), Postives = 452/584 (77.40%), Query Frame = 1
Query: 24 LLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRVFNQLIRPNIFPCNAI 83
+LQG I++SHL QIHA++FR+L HQDNL+ATRLIGHYP + LRVF+QL+ PNIFP NAI
Sbjct: 1 MLQGHISHSHLLQIHAQIFRVLAHQDNLVATRLIGHYPSRLALRVFDQLLTPNIFPFNAI 60
Query: 84 IRVLAQHNSSFLPFSIFKSLKHLSLSPNDFTFSFLLKAFHRSSHALNVKQIHTHVLKMGY 143
IRVL + + F +FK+L SLSPNDFTFSFLLKA RS+ A VKQ HTHV+K+G+
Sbjct: 61 IRVLGEESLCSCAFFVFKALLQRSLSPNDFTFSFLLKACFRSNDAKYVKQAHTHVVKLGF 120
Query: 144 LGDSFISNALLAVYARSLKDMASAHKLFDEMSDRDMACCWTSLIAGYAQKGLAEKGLLLF 203
+ DSFI N LL YA KDM S K+FDEM DR M CWTSLIAG AQ G E+ L LF
Sbjct: 121 VSDSFICNGLLVAYAMGFKDMISGRKVFDEMPDRAMVRCWTSLIAGSAQSGQTEEVLRLF 180
Query: 204 VMMIKENMQPEDDTMVSVLSACSKFQISEIEKWVVELRQLVNKFDSKSSCCDSINIVLIY 263
MM+KEN++PE+DT+VSVLSACSK + EIEKWV+ L + +N D+ S DS+N VL Y
Sbjct: 181 FMMVKENLRPENDTIVSVLSACSKLEAVEIEKWVMILSEFINDDDTGSFGRDSVNTVLAY 240
Query: 264 LYGKWGMIEKSEEKFNEIVD--KRSVLVWNSMINAYFQNGCPVEALTLFRLMVENSHCKP 323
LYGKWG +EK +E+F+EIV KRSVL WN +I+AY QNGC EAL+LFR+M+E+ + +P
Sbjct: 241 LYGKWGKVEKCKERFDEIVGIGKRSVLPWNVIISAYVQNGCSFEALSLFRVMIEDLNLRP 300
Query: 324 NHVTMVTVLSACAQIGDLQLGCWVHEVLEHGGRSGIIASNKMLATALIDMYCKCGSLERA 383
NHVTMV+VLSACAQ+GDL LG W+H ++ G I+ SN LATALIDMY KCG+L +A
Sbjct: 301 NHVTMVSVLSACAQVGDLDLGKWIHGYVKSEGCKAIVESNTFLATALIDMYSKCGNLGKA 360
Query: 384 KEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEVDIRPTTGTFIGLLSACSHS 443
K+VF Q+++KDV+SFNAMIMGLA+NG+G+EAL+LF++MQE+ +RP +GTF+G+L ACSHS
Sbjct: 361 KDVFEQMVSKDVVSFNAMIMGLAINGEGEEALRLFSKMQELSLRPNSGTFLGVLCACSHS 420
Query: 444 GFLEQGHQIFIQMTTRYLILPSLEHYACYIDLLARAGHFENALAVISTMPFEPNNFVWSS 503
G L+ G Q+F+ M + + P LEHYACY+DLLAR G E A V+++MPF PNNFVW +
Sbjct: 421 GLLDTGRQMFLDMIPHFSVPPELEHYACYVDLLARVGLLEEAFEVVASMPFVPNNFVWGA 480
Query: 504 LLRGCLLHSRFELAQYVSKRLVEVDPENSAGYVMQANSFARDLQWDGASALRWFMREKGV 563
LL+GC LHSR ELAQ VS++LV+VDPENSAGYVM +N+ A D QW S LRW MREKGV
Sbjct: 481 LLQGCRLHSRLELAQDVSQKLVKVDPENSAGYVMFSNALASDQQWGEVSGLRWLMREKGV 540
Query: 564 HKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNELEKQMKL 606
K PG SWIS++ +VHEF + + SHP +D +Y+TLN L K+MK+
Sbjct: 541 RKHPGCSWISVNRVVHEFLAGSLSHPQIDSIYHTLNGLVKEMKV 584
BLAST of Lsi03G005580 vs. TrEMBL
Match:
A0A067LJI3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16282 PE=4 SV=1)
HSP 1 Score: 741.5 bits (1913), Expect = 8.2e-211
Identity = 356/593 (60.03%), Postives = 453/593 (76.39%), Query Frame = 1
Query: 18 SVNLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRVFNQLIRPNI 77
S LS LLQGRI HL QIHA+VFRL HQDNLIATRLIGHYP +R+FNQ+ PN+
Sbjct: 9 SATLSALLQGRIPIPHLLQIHAKVFRLDAHQDNLIATRLIGHYPSKFSIRLFNQIQNPNL 68
Query: 78 FPCNAIIRVLAQHNSSFLPFSIFKSLKHLSLSPNDFTFSFLLKAFHRSSHALNVKQIHTH 137
FP NAIIRVLA F +F+ LK L PND TFSF+LKA S + V+Q+HTH
Sbjct: 69 FPFNAIIRVLAHEGDFHGSFLLFRRLKRQHLYPNDLTFSFILKACFGSKNVFYVEQVHTH 128
Query: 138 VLKMGYLGDSFISNALLAVYARSLKDMASAHKLFDEMSDRDMACCWTSLIAGYAQKGLAE 197
+ K+G++ D F+ NALLA+YA+ KD+ SA LFDEM ++ + CCWTSLIAG+AQ G AE
Sbjct: 129 IFKVGFITDPFVCNALLALYAKGFKDLVSARMLFDEMPEKGVVCCWTSLIAGFAQSGYAE 188
Query: 198 KGLLLFVMMIKENMQPEDDTMVSVLSACSKFQISEIEKWVVELRQLVNKFDSKSSCCDSI 257
+ L F +M+KEN+ PEDDT+VSVLSACS +I +IEKW+ L +L+N+ DSK DS+
Sbjct: 189 EALRFFRLMVKENLSPEDDTLVSVLSACSSLEIHQIEKWLTLLLELINEIDSKIR--DSV 248
Query: 258 NIVLIYLYGKWGMIEKSEEKFNEIVD--KRSVLVWNSMINAYFQNGCPVEALTLFRLMVE 317
N VL+YLYGKWG IEKS E+F++I D KRSVL WNSMINAY QNG + L LFRLM+
Sbjct: 249 NNVLVYLYGKWGNIEKSRERFDDISDDGKRSVLPWNSMINAYVQNGDSLGGLNLFRLMIM 308
Query: 318 NSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLEHGGRSGIIASNKMLATALIDMYCKC 377
+ C+PNHVTMV+VLSACAQIGDL+LG WVH+ ++ G+ G++ SN++LATA IDMY KC
Sbjct: 309 DPTCRPNHVTMVSVLSACAQIGDLELGMWVHQYMKSRGQKGVLQSNRILATAFIDMYSKC 368
Query: 378 GSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEVDIRPTTGTFIGLL 437
GSL++AK+VF+Q+++KDV+SFNAMIMGLA+NG+G +A+ LF++MQE + P GTF+GLL
Sbjct: 369 GSLDKAKDVFNQMVSKDVVSFNAMIMGLAINGEGVKAVNLFSKMQEFGLHPNPGTFLGLL 428
Query: 438 SACSHSGFLEQGHQIFIQMTTRYLILPSLEHYACYIDLLARAGHFENALAVISTMPFEPN 497
ACSHSG ++G +IF+ M++R+L+ P LEHYACYIDLLAR GH E A V ++MPF+PN
Sbjct: 429 WACSHSGLSDEGQKIFLDMSSRFLVRPKLEHYACYIDLLAREGHLEEAFKVTTSMPFKPN 488
Query: 498 NFVWSSLLRGCLLHSRFELAQYVSKRLVEVDPENSAGYVMQANSFARDLQWDGASALRWF 557
NFVW +LL GCLLH + +LA+ + KRLVEVDP NSAGYVM AN FA D +W+ SALRWF
Sbjct: 489 NFVWGALLGGCLLHYKVDLAKIIYKRLVEVDPANSAGYVMLANIFAVDHKWNDVSALRWF 548
Query: 558 MREKGVHKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNELEKQMKLVIP 609
MREKGV KQPG SWI+++GIVHEF + SHP ++ +Y+ L+ L + MK P
Sbjct: 549 MREKGVKKQPGCSWINVNGIVHEFLVGSPSHPQMESIYHILHGLVRDMKNANP 599
BLAST of Lsi03G005580 vs. TAIR10
Match:
AT2G29760.1 (AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 355.1 bits (910), Expect = 8.4e-98
Identity = 217/625 (34.72%), Postives = 342/625 (54.72%), Query Frame = 1
Query: 15 NPESVNLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHS------VGLRV 74
N S ++S L++ ++ L+Q H + R D A++L S +V
Sbjct: 28 NERSRHIS-LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKV 87
Query: 75 FNQLIRPNIFPCNAIIRVLAQHNSSFLPFSIFKSLKHLSLS---PNDFTFSFLLKAFHRS 134
F+++ +PN F N +IR A L SI+ L +S S PN +TF FL+KA
Sbjct: 88 FDEIPKPNSFAWNTLIRAYASGPDPVL--SIWAFLDMVSESQCYPNKYTFPFLIKAAAEV 147
Query: 135 SHALNVKQIHTHVLKMGYLGDSFISNALLAVYARSLKDMASAHKLFDEMSDRDMACCWTS 194
S + +H +K D F++N+L+ Y S D+ SA K+F + ++D+ W S
Sbjct: 148 SSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYF-SCGDLDSACKVFTTIKEKDVVS-WNS 207
Query: 195 LIAGYAQKGLAEKGLLLFVMMIKENMQPEDDTMVSVLSACSKFQ--------ISEIEKWV 254
+I G+ QKG +K L LF M E+++ TMV VLSAC+K + S IE+
Sbjct: 208 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR 267
Query: 255 VELR-QLVNKFDSKSSCCDSI--------------NIVLIYLYGKWGMIEKSE---EKFN 314
V + L N + C SI N+ + + + E E E N
Sbjct: 268 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 327
Query: 315 EIVDKRSVLVWNSMINAYFQNGCPVEALTLFRLMVENSHCKPNHVTMVTVLSACAQIGDL 374
+ K ++ WN++I+AY QNG P EAL +F + + K N +T+V+ LSACAQ+G L
Sbjct: 328 SMPQK-DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGAL 387
Query: 375 QLGCWVHEVLEHGGRSGIIASNKMLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAM 434
+LG W+H ++ G I N + +ALI MY KCG LE+++EVF+ + +DV ++AM
Sbjct: 388 ELGRWIHSYIKKHG----IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAM 447
Query: 435 IMGLAVNGKGDEALKLFAQMQEVDIRPTTGTFIGLLSACSHSGFLEQGHQIFIQMTTRYL 494
I GLA++G G+EA+ +F +MQE +++P TF + ACSH+G +++ +F QM + Y
Sbjct: 448 IGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYG 507
Query: 495 ILPSLEHYACYIDLLARAGHFENALAVISTMPFEPNNFVWSSLLRGCLLHSRFELAQYVS 554
I+P +HYAC +D+L R+G+ E A+ I MP P+ VW +LL C +H+ LA+
Sbjct: 508 IVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMAC 567
Query: 555 KRLVEVDPENSAGYVMQANSFARDLQWDGASALRWFMREKGVHKQPGQSWISIDGIVHEF 605
RL+E++P N +V+ +N +A+ +W+ S LR MR G+ K+PG S I IDG++HEF
Sbjct: 568 TRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEF 627
BLAST of Lsi03G005580 vs. TAIR10
Match:
AT3G08820.1 (AT3G08820.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 346.3 bits (887), Expect = 3.9e-95
Identity = 199/583 (34.13%), Postives = 315/583 (54.03%), Query Frame = 1
Query: 32 SHLRQIHARVFRLLKHQD----NLIATRLIGHYPHSVGLRVFNQLIRPNIFPCNAIIRVL 91
+HL+QIH + H D NL+ R + +F+ PNIF N++I
Sbjct: 27 NHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGF 86
Query: 92 AQHNSSFLPFSIFKSLKHLSLSPNDFTFSFLLKAFHRSSHALNVKQIHTHVLKMGYLGDS 151
++ +F S++ L + FTF +LKA R+S +H+ V+K G+ D
Sbjct: 87 VNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDV 146
Query: 152 FISNALLAVYARSLKDMASAHKLFDEMSDRDMACCWTSLIAGYAQKGLAEKGLLLFVMMI 211
+LL++Y+ S + + AHKLFDE+ DR + WT+L +GY G + + LF M+
Sbjct: 147 AAMTSLLSIYSGSGR-LNDAHKLFDEIPDRSVVT-WTALFSGYTTSGRHREAIDLFKKMV 206
Query: 212 KENMQPEDDTMVSVLSACSKFQISEIEKWVV----ELRQLVNKFDSKSSCCDSINIVLIY 271
+ ++P+ +V VLSAC + +W+V E+ N F + L+
Sbjct: 207 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSF---------VRTTLVN 266
Query: 272 LYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGCPVEALTLFRLMVENSHCKPNH 331
LY K G +EK+ F+ +V+K ++ W++MI Y N P E + LF M++ + KP+
Sbjct: 267 LYAKCGKMEKARSVFDSMVEK-DIVTWSTMIQGYASNSFPKEGIELFLQMLQEN-LKPDQ 326
Query: 332 VTMVTVLSACAQIGDLQLGCWVHEVLEHGGRSGIIASNKMLATALIDMYCKCGSLERAKE 391
++V LS+CA +G L LG W +++ +N +A ALIDMY KCG++ R E
Sbjct: 327 FSIVGFLSSCASLGALDLGEWGISLIDRHE----FLTNLFMANALIDMYAKCGAMARGFE 386
Query: 392 VFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEVDIRPTTGTFIGLLSACSHSGF 451
VF ++ KD++ NA I GLA NG + +F Q +++ I P TF+GLL C H+G
Sbjct: 387 VFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGL 446
Query: 452 LEQGHQIFIQMTTRYLILPSLEHYACYIDLLARAGHFENALAVISTMPFEPNNFVWSSLL 511
++ G + F ++ Y + ++EHY C +DL RAG ++A +I MP PN VW +LL
Sbjct: 447 IQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALL 506
Query: 512 RGCLLHSRFELAQYVSKRLVEVDPENSAGYVMQANSFARDLQWDGASALRWFMREKGVHK 571
GC L +LA+ V K L+ ++P N+ YV +N ++ +WD A+ +R M +KG+ K
Sbjct: 507 SGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKK 566
Query: 572 QPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNELEKQMKLV 607
PG SWI ++G VHEF + KSHP D +Y L +L +M+L+
Sbjct: 567 IPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLM 592
BLAST of Lsi03G005580 vs. TAIR10
Match:
AT3G12770.1 (AT3G12770.1 mitochondrial editing factor 22)
HSP 1 Score: 333.6 bits (854), Expect = 2.6e-91
Identity = 197/590 (33.39%), Postives = 331/590 (56.10%), Query Frame = 1
Query: 22 SDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVG-----LRVFNQLIRPN 81
+ L+ + + L+QIHAR+ L + T+LI H S G +VF+ L RP
Sbjct: 25 ASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLI-HASSSFGDITFARQVFDDLPRPQ 84
Query: 82 IFPCNAIIRVLAQHNSSFLPFSIFKSLKHLSLSPNDFTFSFLLKAFHRSSHALNVKQIHT 141
IFP NAIIR +++N ++ +++ +SP+ FTF LLKA SH + +H
Sbjct: 85 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 144
Query: 142 HVLKMGYLGDSFISNALLAVYARSLKDMASAHKLFD--EMSDRDMACCWTSLIAGYAQKG 201
V ++G+ D F+ N L+A+YA+ + + SA +F+ + +R + WT++++ YAQ G
Sbjct: 145 QVFRLGFDADVFVQNGLIALYAKCRR-LGSARTVFEGLPLPERTIVS-WTAIVSAYAQNG 204
Query: 202 LAEKGLLLFVMMIKENMQPEDDTMVSVLSACSKFQISEIEKWVVELRQLVNKFDSKSSCC 261
+ L +F M K +++P+ +VSVL+A F + K + V K +
Sbjct: 205 EPMEALEIFSQMRKMDVKPDWVALVSVLNA---FTCLQDLKQGRSIHASVVKMGLEIE-- 264
Query: 262 DSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGCPVEALTLFRLMV 321
+ I L +Y K G + ++ F++ + ++++WN+MI+ Y +NG EA+ +F M+
Sbjct: 265 PDLLISLNTMYAKCGQVATAKILFDK-MKSPNLILWNAMISGYAKNGYAREAIDMFHEMI 324
Query: 322 ENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLEHGGRSGIIASNKMLATALIDMYCK 381
N +P+ +++ + +SACAQ+G L+ + E+ GRS + +++ALIDM+ K
Sbjct: 325 -NKDVRPDTISITSAISACAQVGSLE---QARSMYEYVGRSD-YRDDVFISSALIDMFAK 384
Query: 382 CGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEVDIRPTTGTFIGL 441
CGS+E A+ VF + +++DV+ ++AMI+G ++G+ EA+ L+ M+ + P TF+GL
Sbjct: 385 CGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGL 444
Query: 442 LSACSHSGFLEQGHQIFIQMTTRYLILPSLEHYACYIDLLARAGHFENALAVISTMPFEP 501
L AC+HSG + +G F +M + I P +HYAC IDLL RAGH + A VI MP +P
Sbjct: 445 LMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQP 504
Query: 502 NNFVWSSLLRGCLLHSRFELAQYVSKRLVEVDPENSAGYVMQANSFARDLQWDGASALRW 561
VW +LL C H EL +Y +++L +DP N+ YV +N +A WD + +R
Sbjct: 505 GVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRV 564
Query: 562 FMREKGVHKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNELEKQMK 605
M+EKG++K G SW+ + G + F KSHP + + + +E ++K
Sbjct: 565 RMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLK 599
BLAST of Lsi03G005580 vs. TAIR10
Match:
AT3G29230.1 (AT3G29230.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 333.6 bits (854), Expect = 2.6e-91
Identity = 189/576 (32.81%), Postives = 317/576 (55.03%), Query Frame = 1
Query: 30 NNSHLRQIHARVFRLLKHQDNLIATRLIGHYP----HSVGLRVFNQLIRPNIFPCNAIIR 89
N + ++Q+HA++ R H+D IA +LI ++ +RVFNQ+ PN+ CN++IR
Sbjct: 31 NLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIR 90
Query: 90 VLAQHNSSFLPFSIFKSLKHLSLSPNDFTFSFLLKAFHRSSHALNVKQIHTHVLKMGYLG 149
AQ++ + F +F ++ L ++FT+ FLLKA S VK +H H+ K+G
Sbjct: 91 AHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSS 150
Query: 150 DSFISNALLAVYAR-SLKDMASAHKLFDEMSDRDMACCWTSLIAGYAQKGLAEKGLLLFV 209
D ++ NAL+ Y+R + A KLF++MS+RD W S++ G + G LF
Sbjct: 151 DIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVS-WNSMLGGLVKAGELRDARRLFD 210
Query: 210 MMIKENMQPEDDTMVSVLSACSKFQISEIEKWVVELRQLVNKFDSKSSCCDSINIVLIYL 269
M + ++ + TM+ + C + + +L K +++ S ++
Sbjct: 211 EMPQRDLISWN-TMLDGYARCREMS---------KAFELFEKMPERNTVSWS---TMVMG 270
Query: 270 YGKWGMIEKSEEKFNEI-VDKRSVLVWNSMINAYFQNGCPVEALTLFRLMVENSHCKPNH 329
Y K G +E + F+++ + ++V+ W +I Y + G EA L MV S K +
Sbjct: 271 YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVA-SGLKFDA 330
Query: 330 VTMVTVLSACAQIGDLQLGCWVHEVLEHGGRSGIIASNKMLATALIDMYCKCGSLERAKE 389
++++L+AC + G L LG +H +L+ + SN + AL+DMY KCG+L++A +
Sbjct: 331 AAVISILAACTESGLLSLGMRIHSILKRSN----LGSNAYVLNALLDMYAKCGNLKKAFD 390
Query: 390 VFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEVDIRPTTGTFIGLLSACSHSGF 449
VF+ + KD++S+N M+ GL V+G G EA++LF++M+ IRP TFI +L +C+H+G
Sbjct: 391 VFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGL 450
Query: 450 LEQGHQIFIQMTTRYLILPSLEHYACYIDLLARAGHFENALAVISTMPFEPNNFVWSSLL 509
+++G F M Y ++P +EHY C +DLL R G + A+ V+ TMP EPN +W +LL
Sbjct: 451 IDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALL 510
Query: 510 RGCLLHSRFELAQYVSKRLVEVDPENSAGYVMQANSFARDLQWDGASALRWFMREKGVHK 569
C +H+ ++A+ V LV++DP + Y + +N +A W+G + +R M+ GV K
Sbjct: 511 GACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEK 570
Query: 570 QPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNEL 600
G S + ++ +HEF KSHP D +Y L L
Sbjct: 571 PSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
BLAST of Lsi03G005580 vs. TAIR10
Match:
AT1G08070.1 (AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 323.9 bits (829), Expect = 2.1e-88
Identity = 206/607 (33.94%), Postives = 318/607 (52.39%), Query Frame = 1
Query: 34 LRQIHARVFRLLKHQDNLIATRLIGHY---PHSVGL----RVFNQLIRPNIFPCNAIIRV 93
LR IHA++ ++ H N ++LI PH GL VF + PN+ N + R
Sbjct: 49 LRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRG 108
Query: 94 LAQH--------------------NSSFLPFSIFKSLKHLSLSPNDFTFSFLLKA----- 153
A NS PF + K + +LK
Sbjct: 109 HALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLD 168
Query: 154 --FHRSSHALNVKQIHTH----VLKMGYLGDSFISNALLAVYARSLKDMASAHKLFDEMS 213
H S ++ V+ V D AL+ YA S + +A KLFDE+
Sbjct: 169 LYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYA-SRGYIENAQKLFDEIP 228
Query: 214 DRDMACCWTSLIAGYAQKGLAEKGLLLFVMMIKENMQPEDDTMVSVLSACSKFQISEIEK 273
+D+ W ++I+GYA+ G ++ L LF M+K N++P++ TMV+V+SAC+ +
Sbjct: 229 VKDVVS-WNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA-------QS 288
Query: 274 WVVELRQLVNKFDSKSSCCDSINIV--LIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSM 333
+EL + V+ + ++ IV LI LY K G +E + F E + + V+ WN++
Sbjct: 289 GSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF-ERLPYKDVISWNTL 348
Query: 334 INAYFQNGCPVEALTLFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLEHGG 393
I Y EAL LF+ M+ + PN VTM+++L ACA +G + +G W+H ++
Sbjct: 349 IGGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYIDK-- 408
Query: 394 RSGIIASNKMLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEAL 453
R + + L T+LIDMY KCG +E A +VF+ +++K + S+NAMI G A++G+ D +
Sbjct: 409 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 468
Query: 454 KLFAQMQEVDIRPTTGTFIGLLSACSHSGFLEQGHQIFIQMTTRYLILPSLEHYACYIDL 513
LF++M+++ I+P TF+GLLSACSHSG L+ G IF MT Y + P LEHY C IDL
Sbjct: 469 DLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDL 528
Query: 514 LARAGHFENALAVISTMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKRLVEVDPENSAGY 573
L +G F+ A +I+ M EP+ +W SLL+ C +H EL + ++ L++++PEN Y
Sbjct: 529 LGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSY 588
Query: 574 VMQANSFARDLQWDGASALRWFMREKGVHKQPGQSWISIDGIVHEFFSATKSHPYVDLLY 601
V+ +N +A +W+ + R + +KG+ K PG S I ID +VHEF K HP +Y
Sbjct: 589 VLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 642
BLAST of Lsi03G005580 vs. NCBI nr
Match:
gi|659110039|ref|XP_008455016.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like isoform X1 [Cucumis melo])
HSP 1 Score: 1129.8 bits (2921), Expect = 0.0e+00
Identity = 551/608 (90.62%), Postives = 578/608 (95.07%), Query Frame = 1
Query: 1 MVNGKSYAMRSLCVNPESVNLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHY 60
M+N KSYAMR L VNPE +NLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHY
Sbjct: 1 MINIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHY 60
Query: 61 PHSVGLRVFNQLIRPNIFPCNAIIRVLAQHNSSFLPFSIFKSLKHLSLSPNDFTFSFLLK 120
PHSVGLRVFNQLIRPNIFPCNAIIRVLA+HN+SFL SIFKSLKHLSLSPNDFTFSFLLK
Sbjct: 61 PHSVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLK 120
Query: 121 AFHRSSHALNVKQIHTHVLKMGYLGDSFISNALLAVYARSLKDMASAHKLFDEMSDRDMA 180
AFHRS +AL+VKQ+HTHVLKMGY GDSFISNALL VYAR LKDMASAHK+FDEMSDR+MA
Sbjct: 121 AFHRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMA 180
Query: 181 CCWTSLIAGYAQKGLAEKGLLLFVMMIKENMQPEDDTMVSVLSACSKFQISEIEKWVVEL 240
CCWTSLIAGYAQ GLAEK +L+FV MIKENMQPEDDTMVSVLSACSKFQI+EIEKWVV L
Sbjct: 181 CCWTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVAL 240
Query: 241 RQLVNKFDSKSSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQN 300
R+LVNKFDSKSSCCDSINIVLIYLYGKWGM+EKSEEKFNEI+DK+SVLVWNSMINAYFQN
Sbjct: 241 RELVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQN 300
Query: 301 GCPVEALTLFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLEHGGRSGIIAS 360
G PVEALTLFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+ GR GIIAS
Sbjct: 301 GFPVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIAS 360
Query: 361 NKMLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQ 420
NKMLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQ
Sbjct: 361 NKMLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQ 420
Query: 421 EVDIRPTTGTFIGLLSACSHSGFLEQGHQIFIQMTTRYLILPSLEHYACYIDLLARAGHF 480
E+DIRP+TGTFIGLLSACSHSGFLEQGHQIFI+MTT+YLI PSLEHYACYIDLLARAG F
Sbjct: 421 EIDIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRF 480
Query: 481 ENALAVISTMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKRLVEVDPENSAGYVMQANSF 540
E+AL V+STMPFEPNNFVWSSLLRGCLLHS FELAQYVSK+LVEVDPENSAGYVMQANSF
Sbjct: 481 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSF 540
Query: 541 ARDLQWDGASALRWFMREKGVHKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNELE 600
A D QWD SALRWFMREKGVHKQPGQSWISIDG VHEFFSATKSHPYVDLLY+TLNEL+
Sbjct: 541 ASDRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELD 600
Query: 601 KQMKLVIP 609
KQ KLVIP
Sbjct: 601 KQTKLVIP 608
BLAST of Lsi03G005580 vs. NCBI nr
Match:
gi|700188636|gb|KGN43869.1| (hypothetical protein Csa_7G071580 [Cucumis sativus])
HSP 1 Score: 1111.7 bits (2874), Expect = 0.0e+00
Identity = 541/600 (90.17%), Postives = 568/600 (94.67%), Query Frame = 1
Query: 9 MRSLCVNPESVNLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRV 68
MR LCVNPE ++LSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRV
Sbjct: 1 MRCLCVNPEFISLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRV 60
Query: 69 FNQLIRPNIFPCNAIIRVLAQHNSSFLPFSIFKSLKHLSLSPNDFTFSFLLKAFHRSSHA 128
FNQLIRPNIFPCNAIIRVLA+HNSSF SIFK LKHLSLSPNDFTFSFLLKAFHRS +A
Sbjct: 61 FNQLIRPNIFPCNAIIRVLAEHNSSFFALSIFKYLKHLSLSPNDFTFSFLLKAFHRSCNA 120
Query: 129 LNVKQIHTHVLKMGYLGDSFISNALLAVYARSLKDMASAHKLFDEMSDRDMACCWTSLIA 188
LNVKQ+HTHVLKMGY GDSFISN+LL VYAR LK+MASAHKLFDEMSDR+MACCWTSLIA
Sbjct: 121 LNVKQVHTHVLKMGYFGDSFISNSLLGVYARGLKEMASAHKLFDEMSDREMACCWTSLIA 180
Query: 189 GYAQKGLAEKGLLLFVMMIKENMQPEDDTMVSVLSACSKFQISEIEKWVVELRQLVNKFD 248
GYAQ GLAEK +LLF MM+KEN+QPEDDT+VSVLSACSK QI+EIEKWVVELRQLVNK D
Sbjct: 181 GYAQMGLAEKAMLLFFMMVKENIQPEDDTIVSVLSACSKLQIAEIEKWVVELRQLVNKCD 240
Query: 249 SKSSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGCPVEALT 308
SK SCCDSINIVLIYLYGKWGM+EKSEEKFNE+VDKRSVLVWNSMINAYFQNG PVEALT
Sbjct: 241 SKRSCCDSINIVLIYLYGKWGMVEKSEEKFNEVVDKRSVLVWNSMINAYFQNGFPVEALT 300
Query: 309 LFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLEHGGRSGIIASNKMLATAL 368
LFRLMVEN HCKPNHVTMVTV+SACAQIGDLQLG WVHEVL+ GGR GIIASNKMLAT+L
Sbjct: 301 LFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRGGRKGIIASNKMLATSL 360
Query: 369 IDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEVDIRPTT 428
IDMYCKCGSLERAKEVFHQLINKDVI+FNAMIMGLAVN KGDEALKLFAQMQE++I P+T
Sbjct: 361 IDMYCKCGSLERAKEVFHQLINKDVITFNAMIMGLAVNSKGDEALKLFAQMQEINIIPST 420
Query: 429 GTFIGLLSACSHSGFLEQGHQIFIQMTTRYLILPSLEHYACYIDLLARAGHFENALAVIS 488
GTFIGLLSACSHSGFLEQG QIFI+MTT YL+ PSLEHYACYIDLLARAGHF++AL VIS
Sbjct: 421 GTFIGLLSACSHSGFLEQGRQIFIEMTTHYLVSPSLEHYACYIDLLARAGHFDDALEVIS 480
Query: 489 TMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKRLVEVDPENSAGYVMQANSFARDLQWDG 548
TMPFEPNNFVWSSLLRGCLLHSRFELAQYVSK+LVEVDPENSAGYVMQANSFA DLQWD
Sbjct: 481 TMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDD 540
Query: 549 ASALRWFMREKGVHKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNELEKQMKLVIP 608
SALRWFMREKGVHKQPGQSWISIDG VHEFFSATKSHPYVDLLY TLNELEKQMKLVIP
Sbjct: 541 VSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYTTLNELEKQMKLVIP 600
BLAST of Lsi03G005580 vs. NCBI nr
Match:
gi|659110041|ref|XP_008455017.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like isoform X2 [Cucumis melo])
HSP 1 Score: 880.6 bits (2274), Expect = 1.6e-252
Identity = 425/468 (90.81%), Postives = 445/468 (95.09%), Query Frame = 1
Query: 141 MGYLGDSFISNALLAVYARSLKDMASAHKLFDEMSDRDMACCWTSLIAGYAQKGLAEKGL 200
MGY GDSFISNALL VYAR LKDMASAHK+FDEMSDR+MACCWTSLIAGYAQ GLAEK +
Sbjct: 1 MGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMACCWTSLIAGYAQMGLAEKAM 60
Query: 201 LLFVMMIKENMQPEDDTMVSVLSACSKFQISEIEKWVVELRQLVNKFDSKSSCCDSINIV 260
L+FV MIKENMQPEDDTMVSVLSACSKFQI+EIEKWVV LR+LVNKFDSKSSCCDSINIV
Sbjct: 61 LIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVALRELVNKFDSKSSCCDSINIV 120
Query: 261 LIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGCPVEALTLFRLMVENSHCK 320
LIYLYGKWGM+EKSEEKFNEI+DK+SVLVWNSMINAYFQNG PVEALTLFRLMVEN HCK
Sbjct: 121 LIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQNGFPVEALTLFRLMVENPHCK 180
Query: 321 PNHVTMVTVLSACAQIGDLQLGCWVHEVLEHGGRSGIIASNKMLATALIDMYCKCGSLER 380
PNHVTMVTV+SACAQIGDLQLG WVHEVL+ GR GIIASNKMLATALIDMYCKCGSLER
Sbjct: 181 PNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIASNKMLATALIDMYCKCGSLER 240
Query: 381 AKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEVDIRPTTGTFIGLLSACSH 440
AKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQE+DIRP+TGTFIGLLSACSH
Sbjct: 241 AKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEIDIRPSTGTFIGLLSACSH 300
Query: 441 SGFLEQGHQIFIQMTTRYLILPSLEHYACYIDLLARAGHFENALAVISTMPFEPNNFVWS 500
SGFLEQGHQIFI+MTT+YLI PSLEHYACYIDLLARAG FE+AL V+STMPFEPNNFVWS
Sbjct: 301 SGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRFEDALEVVSTMPFEPNNFVWS 360
Query: 501 SLLRGCLLHSRFELAQYVSKRLVEVDPENSAGYVMQANSFARDLQWDGASALRWFMREKG 560
SLLRGCLLHS FELAQYVSK+LVEVDPENSAGYVMQANSFA D QWD SALRWFMREKG
Sbjct: 361 SLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSFASDRQWDDVSALRWFMREKG 420
Query: 561 VHKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNELEKQMKLVIP 609
VHKQPGQSWISIDG VHEFFSATKSHPYVDLLY+TLNEL+KQ KLVIP
Sbjct: 421 VHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELDKQTKLVIP 468
BLAST of Lsi03G005580 vs. NCBI nr
Match:
gi|778724922|ref|XP_011658883.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g08820 [Cucumis sativus])
HSP 1 Score: 872.8 bits (2254), Expect = 3.4e-250
Identity = 421/468 (89.96%), Postives = 443/468 (94.66%), Query Frame = 1
Query: 141 MGYLGDSFISNALLAVYARSLKDMASAHKLFDEMSDRDMACCWTSLIAGYAQKGLAEKGL 200
MGY GDSFISN+LL VYAR LK+MASAHKLFDEMSDR+MACCWTSLIAGYAQ GLAEK +
Sbjct: 1 MGYFGDSFISNSLLGVYARGLKEMASAHKLFDEMSDREMACCWTSLIAGYAQMGLAEKAM 60
Query: 201 LLFVMMIKENMQPEDDTMVSVLSACSKFQISEIEKWVVELRQLVNKFDSKSSCCDSINIV 260
LLF MM+KEN+QPEDDT+VSVLSACSK QI+EIEKWVVELRQLVNK DSK SCCDSINIV
Sbjct: 61 LLFFMMVKENIQPEDDTIVSVLSACSKLQIAEIEKWVVELRQLVNKCDSKRSCCDSINIV 120
Query: 261 LIYLYGKWGMIEKSEEKFNEIVDKRSVLVWNSMINAYFQNGCPVEALTLFRLMVENSHCK 320
LIYLYGKWGM+EKSEEKFNE+VDKRSVLVWNSMINAYFQNG PVEALTLFRLMVEN HCK
Sbjct: 121 LIYLYGKWGMVEKSEEKFNEVVDKRSVLVWNSMINAYFQNGFPVEALTLFRLMVENPHCK 180
Query: 321 PNHVTMVTVLSACAQIGDLQLGCWVHEVLEHGGRSGIIASNKMLATALIDMYCKCGSLER 380
PNHVTMVTV+SACAQIGDLQLG WVHEVL+ GGR GIIASNKMLAT+LIDMYCKCGSLER
Sbjct: 181 PNHVTMVTVISACAQIGDLQLGSWVHEVLQRGGRKGIIASNKMLATSLIDMYCKCGSLER 240
Query: 381 AKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEVDIRPTTGTFIGLLSACSH 440
AKEVFHQLINKDVI+FNAMIMGLAVN KGDEALKLFAQMQE++I P+TGTFIGLLSACSH
Sbjct: 241 AKEVFHQLINKDVITFNAMIMGLAVNSKGDEALKLFAQMQEINIIPSTGTFIGLLSACSH 300
Query: 441 SGFLEQGHQIFIQMTTRYLILPSLEHYACYIDLLARAGHFENALAVISTMPFEPNNFVWS 500
SGFLEQG QIFI+MTT YL+ PSLEHYACYIDLLARAGHF++AL VISTMPFEPNNFVWS
Sbjct: 301 SGFLEQGRQIFIEMTTHYLVSPSLEHYACYIDLLARAGHFDDALEVISTMPFEPNNFVWS 360
Query: 501 SLLRGCLLHSRFELAQYVSKRLVEVDPENSAGYVMQANSFARDLQWDGASALRWFMREKG 560
SLLRGCLLHSRFELAQYVSK+LVEVDPENSAGYVMQANSFA DLQWD SALRWFMREKG
Sbjct: 361 SLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDDVSALRWFMREKG 420
Query: 561 VHKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNELEKQMKLVIP 609
VHKQPGQSWISIDG VHEFFSATKSHPYVDLLY TLNELEKQMKLVIP
Sbjct: 421 VHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYTTLNELEKQMKLVIP 468
BLAST of Lsi03G005580 vs. NCBI nr
Match:
gi|645261674|ref|XP_008236408.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Prunus mume])
HSP 1 Score: 760.4 bits (1962), Expect = 2.4e-216
Identity = 370/602 (61.46%), Postives = 467/602 (77.57%), Query Frame = 1
Query: 9 MRSLCVNPE---SVNLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVG 68
+ +L NP+ S +L+ LQGRI+ L QIHA+VF++ QDNLIATRLIGHYP +
Sbjct: 26 LHTLPANPQLNISTDLAASLQGRISYPRLLQIHAQVFQVGAQQDNLIATRLIGHYPSHLA 85
Query: 69 LRVFNQLIRPNIFPCNAIIRVLAQHNSSFLPFSIFKSLKHLSLSPNDFTFSFLLKAFHRS 128
LRVF+QL +PNIFP NAIIRV A+ FS+FK LK SLSPNDFTFSFLLKA RS
Sbjct: 86 LRVFHQLQKPNIFPFNAIIRVFAEEGLFSDAFSLFKILKQTSLSPNDFTFSFLLKACFRS 145
Query: 129 SHALNVKQIHTHVLKMGYLGDSFISNALLAVYARSLKDMASAHKLFDEMSDRDMACCWTS 188
++ VKQIHTHV K+G+L +SF+ +LLAVYA+ LKD+ SAH +FDEM ++ + CCWTS
Sbjct: 146 ENSRYVKQIHTHVTKVGFLCNSFVCASLLAVYAKGLKDLGSAHLVFDEMPEKSIVCCWTS 205
Query: 189 LIAGYAQKGLAEKGLLLFVMMIKENMQPEDDTMVSVLSACSKFQISEIEKWVVELRQLVN 248
LIAGYA+ G +E+ L LF+MM+ EN++PEDDTMVSVLSACS I ++EKWV L ++V+
Sbjct: 206 LIAGYARSGQSEQVLRLFLMMVDENLRPEDDTMVSVLSACSNLDIVDVEKWVTILSEVVS 265
Query: 249 KFDSKSSCCDSINIVLIYLYGKWGMIEKSEEKFNEIVD--KRSVLVWNSMINAYFQNGCP 308
D+K CDS+N L+YLYGKWG +EKS ++F++I D K+SVL WN+MI A+ QNG P
Sbjct: 266 NVDAKKFGCDSVNTALVYLYGKWGKVEKSRDQFDQISDNGKQSVLPWNAMIGAFVQNGFP 325
Query: 309 VEALTLFRLMVENSHCKPNHVTMVTVLSACAQIGDLQLGCWVHEVLEHGGRSGIIASNKM 368
+E+L+LFR+MVE+ +PNHVTMV+VLSACAQIGDL LG WVHE L+ G G+I SN++
Sbjct: 326 MESLSLFRVMVEDPKYRPNHVTMVSVLSACAQIGDLDLGRWVHEYLKSKGSKGVIGSNRI 385
Query: 369 LATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQEVD 428
LATALIDMY KCGSLERAKEVF Q+++KD++SFNAMIMGLAVN +G+EAL+LF+++Q+
Sbjct: 386 LATALIDMYSKCGSLERAKEVFDQMVSKDIVSFNAMIMGLAVNSEGEEALRLFSRIQKFG 445
Query: 429 IRPTTGTFIGLLSACSHSGFLEQGHQIFIQMTTRYLILPSLEHYACYIDLLARAGHFENA 488
++P GTF+G L ACSHSG E+G QIF MT+ + + P LEHYACYIDLLAR G E A
Sbjct: 446 LQPNAGTFLGALCACSHSGLSEEGRQIFNDMTSSFSVSPKLEHYACYIDLLARVGLVEEA 505
Query: 489 LAVISTMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKRLVEVDPENSAGYVMQANSFARD 548
L V+++MPFEPN+FVW +LL GCLLHSR +LAQYVS +LV DP+NS GY+M AN+FA D
Sbjct: 506 LEVVTSMPFEPNSFVWGALLGGCLLHSRVDLAQYVSNKLVRSDPDNSGGYIMLANAFASD 565
Query: 549 LQWDGASALRWFMREKGVHKQPGQSWISIDGIVHEFFSATKSHPYVDLLYNTLNELEKQM 606
+W S LRWFMREKGV KQPG SWISIDG+VHEF SHP ++ +YNTL L K+M
Sbjct: 566 RRWGDVSVLRWFMREKGVTKQPGFSWISIDGVVHEFLVGCPSHPQIESIYNTLVGLVKEM 625
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PP175_ARATH | 1.5e-96 | 34.72 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
| PP219_ARATH | 6.9e-94 | 34.13 | Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis th... | [more] |
| PP261_ARATH | 4.6e-90 | 32.81 | Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana GN... | [more] |
| PP224_ARATH | 4.6e-90 | 33.39 | Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN... | [more] |
| PPR21_ARATH | 3.7e-87 | 33.94 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0K4I3_CUCSA | 0.0e+00 | 90.17 | Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071580 PE=4 SV=1 | [more] |
| M5W238_PRUPE | 6.1e-214 | 62.65 | Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021613mg PE=4 SV=1 | [more] |
| A0A061E036_THECC | 8.7e-213 | 61.93 | Pentatricopeptide repeat-containing protein OS=Theobroma cacao GN=TCM_007174 PE=... | [more] |
| F6H681_VITVI | 9.7e-212 | 61.30 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g00370 PE=4 SV=... | [more] |
| A0A067LJI3_JATCU | 8.2e-211 | 60.03 | Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16282 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G29760.1 | 8.4e-98 | 34.72 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G08820.1 | 3.9e-95 | 34.13 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G12770.1 | 2.6e-91 | 33.39 | mitochondrial editing factor 22 | [more] |
| AT3G29230.1 | 2.6e-91 | 32.81 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G08070.1 | 2.1e-88 | 33.94 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
