CmoCh19G001620 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCGGCCTTTCACAGTGAAGACAGGGAATCTTCAGCAAAGGGACAGCCCAGACAGATCTCTCTAAGCGCTTTCCCATTGACCCAAACTTTGTCATTTTTCTTCGACATGTGCACAGCCCCTTTTAAACAAGCCTTGCCCTACCAATTCTAGCCATGCAGGTAAGCCTTTCAAACACCTTTGTTCGTGAAAGTCTCTGAGAAAATTTGTGTTTTCTTCTGTTAAATCTTAATGGGTATCTGTTTTTTTTTTTTTATGAATTATAGCAAGTTCTTCAATGGGTTTTCAAGGAAACTAATGAAAAGGATTCCACAAAGAAGAAGGAAACGAGTTGCGGTAAGAGAAAAAGAATGCACAGTACCTGTTTGATAAAATGTCTGAGTGACTTCGATTCCTTCTTTTGCCAGATAAAGGAAGTTCTAGATCAAAGGAGATAGTGGTTTCTGTTTCTAATCATTGTGGGGGCTCTCAAGGATCAAAGGGATTTGAAGGAAGGAGATTTGATCTAAAGAGATTGAAGTCATTTGCTTTGTTGTGTAGGAAGGATATTGCCAAGTCCTGCTTTTATAGTACCATTAATATTAAGAGGCCTAGAACGACTCAGGGCGGCTTGGATAATATGCATCAGTATTGGATCCATAAGATGAAAAAGGAAGATATTGGTCAAAAGGTAGATTCTTGTTCTGTTCATGCCGGCACCAAGGTGTTGCCGATAACTGATGCCACTCTTGTAGAACAATGCGGCAGTAAGGGTGTAAAGAAAGTTGTGGCCAATGGGGAGAGTAAAACCAAAGCGAAATCAAGAGTGAAGGAACTTTTGAGATGGGCTATGGCTTCTAGATCAGAAAAAGGAGGGAAGTTCATCTCTGGCAAGGTGATTTTCTTTACTTCTTAATTGCCTTTTCCTTGTTAGACATCAATATTTCTATTACTTAGTCTATTGGGTTGAATCATGTATTCTTTATATACTTTGATATCGTGTAACGTAACGGCTCAAGCCCACCGCTAGTAGATATTATCCTCTTTGGACTTTCCCTTTCAAGTTTTTTCTCAAGGTTTTTAAAACGCGTCTGTTAGGGAGAGGCTTACAGACCCTTGTAAAAAAAATGTTTTGTTCTCTTTCCCAACCGATGTGAGATCTCAGGGTCCAATGTCCTCACTGACACTCCCTTCCCCAATCGATGTGGGACTCTCCAATCCACCCCCAGCATTTGTGTTGGCACACCGCTTCGTGTCCACTCCCTTCGGGCTTAGCCTCCTCACTGGCACATCGTCCGGTGTCTAGGTTTGATACCATTTGTAATGGCCTAAGGCTACTGCTAGCAGATATTGTCATATTTGGGCTTTCTCTTTTTGGACTTCCCCTCAAGGTTTTTAAAATGTGTTTGCTAGGGAGAGATTTCCAGACCCTTATAAAAATTGTTTCATTCTCCTCCCCGATCGATGTGGGATCTCATAATCCACCCCCTTTGGGGCTCAGCGTCCTCGTTGACACTCCCTTCCCTAATCGACGTGGGACCCCCCCAATCCATCCCCAACATTCATGCTGACACTACCTCGTGTCTGCTCTCTTTGGGGCTTAGCTTCCTTGCTGGCACATCGCTCGGTGTCCGACTTTGATATCATTTGTAACAGCTCAAGGCCTGACTAACAGATATTGTCCTCTTTGGGCTTTCCCTTTCCGGCTTCTCCTCAAGGTTTTTATAATGTATCTAGTAGGAAGAGGATTATACACCCTTATAAAGAATATTTCATTCTCCTTCTCAATCGACATGGGATCTCACACATCTCTTGGGGTCTAAGGATTAGTTTGGCTTATGGAACCTGGAATGTAAATTGTATCAACATCAATCAATTCCATGTGGGACCCCTAATCCACCCCCTTCGGGGTCCAACGTTCATGCTGGCACACGATCTCATGTCCACCTCCTTTGGGGCTCAACCTCTTTGCTAGCACGTTGTTCGGTGTCAGACTCTGATACTATTTGTAATGGCCCAAGGCTATTACTAGCAGATATTGTCCTCTTTGGACTTTTCCTTTCGGGCTTCTCCTCAAAGTTTTTAAAACACGTCTGATAGAGAGAGATTTTCACATCCTCATAAAGAATGTTTCGTTCTCCTCCTCAACCGATATGGGATCTCATATATCCTTGGGTCCAAGGATTAGTTTGGCTTATATAACCCGGAATGTAAATTGTATCAAATATCAATCAGCTTAGGACCTCGCTGAGTGAATGCCTTAAAATTCACTGAATTTTATGGAACCGAGCATTTGGAAAGTCGTTCCAAACAGGCTCAAAAGCTAGAGTAACTTGCTTATTATTATACCAACTTTTTCAGGTTTCACGAATGCGAAACCGGGGAACTCTTAACGCAAGCATGGACGATGATCGAGCGAGTAACGACTCCCCCAAGATCAGTTTCAGATGGGAAGCCGAAAGCTGCTCCTCCATTTCCTCAGCCTACACGACGGTTTCGGGGGCGTCCTCCTTCAAAAACTGTTCCATTACACTGGATTCCACGGCCATTCATGAAATGAATCACTATTATCCAAGAAAAGGAAGCTGGATCACTACAGATTCTGAATGTAAGATTCTAATCCCCATTTTTCTTACAAAACAAAACACATCAGGAACTGACTTCACTTTCCTTCCATGCCTTCAATGAACAGTTGTTGTGTTAGAGCTATGAAGGAGAAGGAAGACAGATGATCTGTAATGGCTTCATCAACTGTTTGATCTGCCTGCAATATAAGAGCCGTAGATTCTATGCAAAACCATAGGATTTTGTATGTAAAAAGGCTTCATATAGCTATGTAAAACACGTATCTGAAATAACATCTTAACTGAGCTTTACGTCTACGTTCCCTTCTAGAAAGGCCGAGTTTTTTTTCGGGATTTTGCAGGTCGATATCGAGTTCAAAATGGCA TCGGCCTTTCACAGTGAAGACAGGGAATCTTCAGCAAAGGGACAGCCCAGACAGATCTCTCTAAGCGCTTTCCCATTGACCCAAACTTTGTCATTTTTCTTCGACATGTGCACAGCCCCTTTTAAACAAGCCTTGCCCTACCAATTCTAGCCATGCAGCAAGTTCTTCAATGGGTTTTCAAGGAAACTAATGAAAAGGATTCCACAAAGAAGAAGGAAACGAGTTGCGATAAAGGAAGTTCTAGATCAAAGGAGATAGTGGTTTCTGTTTCTAATCATTGTGGGGGCTCTCAAGGATCAAAGGGATTTGAAGGAAGGAGATTTGATCTAAAGAGATTGAAGTCATTTGCTTTGTTGTGTAGGAAGGATATTGCCAAGTCCTGCTTTTATAGTACCATTAATATTAAGAGGCCTAGAACGACTCAGGGCGGCTTGGATAATATGCATCAGTATTGGATCCATAAGATGAAAAAGGAAGATATTGGTCAAAAGGTAGATTCTTGTTCTGTTCATGCCGGCACCAAGGTGTTGCCGATAACTGATGCCACTCTTGTAGAACAATGCGGCAGTAAGGGTGTAAAGAAAGTTGTGGCCAATGGGGAGAGTAAAACCAAAGCGAAATCAAGAGTGAAGGAACTTTTGAGATGGGCTATGGCTTCTAGATCAGAAAAAGGAGGGAAGTTCATCTCTGGCAAGGTTTCACGAATGCGAAACCGGGGAACTCTTAACGCAAGCATGGACGATGATCGAGCGAGTAACGACTCCCCCAAGATCAGTTTCAGATGGGAAGCCGAAAGCTGCTCCTCCATTTCCTCAGCCTACACGACGGTTTCGGGGGCGTCCTCCTTCAAAAACTGTTCCATTACACTGGATTCCACGGCCATTCATGAAATGAATCACTATTATCCAAGAAAAGGAAGCTGGATCACTACAGATTCTGAATTTGTTGTGTTAGAGCTATGAAGGAGAAGGAAGACAGATGATCTGTAATGGCTTCATCAACTGTTTGATCTGCCTGCAATATAAGAGCCGTAGATTCTATGCAAAACCATAGGATTTTGTATGTAAAAAGGCTTCATATAGCTATGTAAAACACGTATCTGAAATAACATCTTAACTGAGCTTTACGTCTACGTTCCCTTCTAGAAAGGCCGAGTTTTTTTTCGGGATTTTGCAGGTCGATATCGAGTTCAAAATGGCA ATGCAGCAAGTTCTTCAATGGGTTTTCAAGGAAACTAATGAAAAGGATTCCACAAAGAAGAAGGAAACGAGTTGCGATAAAGGAAGTTCTAGATCAAAGGAGATAGTGGTTTCTGTTTCTAATCATTGTGGGGGCTCTCAAGGATCAAAGGGATTTGAAGGAAGGAGATTTGATCTAAAGAGATTGAAGTCATTTGCTTTGTTGTGTAGGAAGGATATTGCCAAGTCCTGCTTTTATAGTACCATTAATATTAAGAGGCCTAGAACGACTCAGGGCGGCTTGGATAATATGCATCAGTATTGGATCCATAAGATGAAAAAGGAAGATATTGGTCAAAAGGTAGATTCTTGTTCTGTTCATGCCGGCACCAAGGTGTTGCCGATAACTGATGCCACTCTTGTAGAACAATGCGGCAGTAAGGGTGTAAAGAAAGTTGTGGCCAATGGGGAGAGTAAAACCAAAGCGAAATCAAGAGTGAAGGAACTTTTGAGATGGGCTATGGCTTCTAGATCAGAAAAAGGAGGGAAGTTCATCTCTGGCAAGGTTTCACGAATGCGAAACCGGGGAACTCTTAACGCAAGCATGGACGATGATCGAGCGAGTAACGACTCCCCCAAGATCAGTTTCAGATGGGAAGCCGAAAGCTGCTCCTCCATTTCCTCAGCCTACACGACGGTTTCGGGGGCGTCCTCCTTCAAAAACTGTTCCATTACACTGGATTCCACGGCCATTCATGAAATGAATCACTATTATCCAAGAAAAGGAAGCTGGATCACTACAGATTCTGAATTTGTTGTGTTAGAGCTATGA
BLAST of CmoCh19G001620 vs. TrEMBL
Match: A0A0A0L8R0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G624080 PE=4 SV=1) HSP 1 Score: 404.4 bits (1038), Expect = 1.0e-109 Identity = 216/280 (77.14%), Postives = 239/280 (85.36%), Query Frame = 1
BLAST of CmoCh19G001620 vs. TrEMBL
Match: A0A059AXB9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00807 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 3.0e-48 Identity = 129/289 (44.64%), Postives = 173/289 (59.86%), Query Frame = 1
BLAST of CmoCh19G001620 vs. TrEMBL
Match: F6HZY0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g05640 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 4.3e-47 Identity = 135/288 (46.88%), Postives = 178/288 (61.81%), Query Frame = 1
BLAST of CmoCh19G001620 vs. TrEMBL
Match: B9S549_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1721300 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 1.6e-46 Identity = 120/285 (42.11%), Postives = 176/285 (61.75%), Query Frame = 1
BLAST of CmoCh19G001620 vs. TrEMBL
Match: A0A061DVC9_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_002988 PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 1.3e-43 Identity = 132/290 (45.52%), Postives = 172/290 (59.31%), Query Frame = 1
BLAST of CmoCh19G001620 vs. TAIR10
Match: AT3G24750.1 (AT3G24750.1 unknown protein) HSP 1 Score: 63.9 bits (154), Expect = 1.7e-10 Identity = 50/128 (39.06%), Postives = 72/128 (56.25%), Query Frame = 1
BLAST of CmoCh19G001620 vs. NCBI nr
Match: gi|778682082|ref|XP_004152019.2| (PREDICTED: uncharacterized protein LOC101208427 [Cucumis sativus]) HSP 1 Score: 404.4 bits (1038), Expect = 1.5e-109 Identity = 216/280 (77.14%), Postives = 239/280 (85.36%), Query Frame = 1
BLAST of CmoCh19G001620 vs. NCBI nr
Match: gi|700203207|gb|KGN58340.1| (hypothetical protein Csa_3G624080 [Cucumis sativus]) HSP 1 Score: 404.4 bits (1038), Expect = 1.5e-109 Identity = 216/280 (77.14%), Postives = 239/280 (85.36%), Query Frame = 1
BLAST of CmoCh19G001620 vs. NCBI nr
Match: gi|659109027|ref|XP_008454510.1| (PREDICTED: uncharacterized protein LOC103494908 [Cucumis melo]) HSP 1 Score: 397.1 bits (1019), Expect = 2.4e-107 Identity = 215/281 (76.51%), Postives = 238/281 (84.70%), Query Frame = 1
BLAST of CmoCh19G001620 vs. NCBI nr
Match: gi|1009149231|ref|XP_015892371.1| (PREDICTED: uncharacterized protein LOC107426648 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 228.8 bits (582), Expect = 1.1e-56 Identity = 147/289 (50.87%), Postives = 185/289 (64.01%), Query Frame = 1
BLAST of CmoCh19G001620 vs. NCBI nr
Match: gi|645259742|ref|XP_008235508.1| (PREDICTED: uncharacterized protein LOC103334336 [Prunus mume]) HSP 1 Score: 211.1 bits (536), Expect = 2.4e-51 Identity = 142/294 (48.30%), Postives = 182/294 (61.90%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |