CmaCh02G016920 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAACAATATTGGATCCAAAAGATGATAAACGAAGATATTGCTAAGGGAATGAGAGAGATTGGTCAAATGGCAGATTCTCCTTCTGTTCATGCAGGCACCAAAGTCTTGCCAATCACTGATACCACTTCAGTAGAGCAATGCAGCAAAAAAGATGTTATCTCCAATGGGGAGACAAAAATCAAAGCCAAATCAAGAATGAAGGAGCTTTTGAGATGGGCTGTGGCTTCAAAATCAAAAAAAGGAGGGAAGTTCATCACTGACAAGGTGATTTCTTAACTTCTTAACAACTTGCCCTTGTTTGGATATTGGATTAGATCATTTTCCTCTTGAACTACCACGAAATTTAATAGCTTAAGCTCATAAGTTAAGGTACTATATTCTCGACACTCTTGTTAAGTGTGGACTCGGGGATTAGCATGATTCGAAGAATCGAAAACGTGAACAATACTAACTTCGGTCGAGAGGAAGTGATATTGCAGGGATTTGAGCTTATGGCTCTAGTTATGATATAATTTTAAATTGCTACCAAACCTGTGGGATCCCACCTCAGTTGGGAGGAGAACAAAACATTCTTTATAAGGGTGTGAAAACCTCTCCCTAACAGACGCGTTTTAAAAACTTTGAGGGGAAGTCCTGGTGTGGGAACCTCTTCCTAATAGACGCGTTTTAAAAACTTTGAGGGAAAGCCCTAGTTTGAAAATCTCTCCTAGGCAGATACGTTTTAAAAACTTTGAGAGAAAGTCTTGGTGTGGAAATCTCTCCTTAGCAAACGTGTTTTAAAAACCTTGATGGAAAACTTGGAAGGGAAAGCTCAAAGAGGACAATATCTGCTAGTAGTAGGCTTGTACTGTTACAAAACCCAAAACTTGAACTCATCGTTTTCTATGTTACTAAATCAATAATTAATGGTGACTGTGATTTGTATCCATGCTGAACATGAAAGAAACAAAAACACTAACATAACTATGTTTTGCTTTCTGATGGTTTATACAGTCTTATTTCACAGTCAATAAGTTTTCTATAGTTGAAAGCTATACACAGTACTGAATGGCTCAAAATTATGCAAATTCTTTCAGGTATCACGAACACGAAACCAAGAAGCTCCTGGCTGGGACGATGATCAAGCGAGCAACGACTCCCGCAAGATCAGTTTCAGATGGGAAGCTGAAAGACGCTCCTCCGTTTCCTCAACCTACTCATCGGTATCGCGAGTTTCCTCCTTCAAGAACTGTTCCATTACCCTTAATTCCACTGCCATTGAAGAAATCAATCACTGTTATCCAAGAAAAGGAAGCTGGATCACTACAGATTCTGAATGTAAGGCTCTAAAACTGACCTATATGAAAATTATTATGAAACAAAAGCATGAGGAACTGACTGAATTCCCTTCTCTACCTTGAAACGGACAGTTGTTGTGCTAGAGCTGTGAAGGAAAAGGAAGACAGATTATCAACTGTTTGATCTCCTTGCAATCTGTGAATTGTCAGAGGATTTTTATGTAAATTTTTTGAAGTATCTGTGAAGAACATGCATCTGAAGTAACATTTTGAGTGTAATTCAAACCATCATCTAAAAGTCTTTAGTGTAACAGGGTAACTGAGCTTCACATCTGCCTTCCTTTTTCACTACGTGAAACTTTTCGGGTTTTCGCAGGTCGAGCTTGAGATCACTCAACAAGCATCTTAGGACAACTGAGCTTCACATTTGCCTCCCTTTTCACTATGTGAAACTTTTCGGGTTTTCGCAGGTCGAGCTTGAGATCACAACAGGCATCTTAGGATAACTGAGCTTCATATCTACCTTCCCTTTTTGCAACGTGAAACTTTTTGAGTTTTCGCAGGTCGAGCTTGAGATAAGAATAGGCATCTTAGGACGAGTATCACTCATTTAGATGTTTCATTCTTTTCTTTCGAGTTCAAGCAATTTTGACATTTCATCTTTTCTATCTATCTAC ATGCAACAATATTGGATCCAAAAGATGATAAACGAAGATATTGCTAAGGGAATGAGAGAGATTGGTCAAATGGCAGATTCTCCTTCTGTTCATGCAGGCACCAAAGTCTTGCCAATCACTGATACCACTTCAGTAGAGCAATGCAGCAAAAAAGATGTTATCTCCAATGGGGAGACAAAAATCAAAGCCAAATCAAGAATGAAGGAGCTTTTGAGATGGGCTGTGGCTTCAAAATCAAAAAAAGGAGGGAAGTTCATCACTGACAAGGTATCACGAACACGAAACCAAGAAGCTCCTGGCTGGGACGATGATCAAGCGAGCAACGACTCCCGCAAGATCAGTTTCAGATGGGAAGCTGAAAGACGCTCCTCCGTTTCCTCAACCTACTCATCGGTATCGCGAGTTTCCTCCTTCAAGAACTGTTCCATTACCCTTAATTCCACTGCCATTGAAGAAATCAATCACTGTTATCCAAGAAAAGGAAGCTGGATCACTACAGATTCTGAATTTGTTGTGCTAGAGCTGTGAAGGAAAAGGAAGACAGATTATCAACTGTTTGATCTCCTTGCAATCTGTGAATTGTCAGAGGATTTTTATGTAAATTTTTTGAAGTATCTGTGAAGAACATGCATCTGAAGTAACATTTTGAGTGTAATTCAAACCATCATCTAAAAGTCTTTAGTGTAACAGGGTAACTGAGCTTCACATCTGCCTTCCTTTTTCACTACGTGAAACTTTTCGGGTTTTCGCAGGTCGAGCTTGAGATCACTCAACAAGCATCTTAGGACAACTGAGCTTCACATTTGCCTCCCTTTTCACTATGTGAAACTTTTCGGGTTTTCGCAGGTCGAGCTTGAGATCACAACAGGCATCTTAGGATAACTGAGCTTCATATCTACCTTCCCTTTTTGCAACGTGAAACTTTTTGAGTTTTCGCAGGTCGAGCTTGAGATAAGAATAGGCATCTTAGGACGAGTATCACTCATTTAGATGTTTCATTCTTTTCTTTCGAGTTCAAGCAATTTTGACATTTCATCTTTTCTATCTATCTAC ATGCAACAATATTGGATCCAAAAGATGATAAACGAAGATATTGCTAAGGGAATGAGAGAGATTGGTCAAATGGCAGATTCTCCTTCTGTTCATGCAGGCACCAAAGTCTTGCCAATCACTGATACCACTTCAGTAGAGCAATGCAGCAAAAAAGATGTTATCTCCAATGGGGAGACAAAAATCAAAGCCAAATCAAGAATGAAGGAGCTTTTGAGATGGGCTGTGGCTTCAAAATCAAAAAAAGGAGGGAAGTTCATCACTGACAAGGTATCACGAACACGAAACCAAGAAGCTCCTGGCTGGGACGATGATCAAGCGAGCAACGACTCCCGCAAGATCAGTTTCAGATGGGAAGCTGAAAGACGCTCCTCCGTTTCCTCAACCTACTCATCGGTATCGCGAGTTTCCTCCTTCAAGAACTGTTCCATTACCCTTAATTCCACTGCCATTGAAGAAATCAATCACTGTTATCCAAGAAAAGGAAGCTGGATCACTACAGATTCTGAATTTGTTGTGCTAGAGCTGTGA MQQYWIQKMINEDIAKGMREIGQMADSPSVHAGTKVLPITDTTSVEQCSKKDVISNGETKIKAKSRMKELLRWAVASKSKKGGKFITDKVSRTRNQEAPGWDDDQASNDSRKISFRWEAERRSSVSSTYSSVSRVSSFKNCSITLNSTAIEEINHCYPRKGSWITTDSEFVVLEL
BLAST of CmaCh02G016920 vs. TrEMBL
Match: A0A0A0L8R0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G624080 PE=4 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 1.1e-59 Identity = 131/180 (72.78%), Postives = 145/180 (80.56%), Query Frame = 1
BLAST of CmaCh02G016920 vs. TrEMBL
Match: F6HZY0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g05640 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.4e-30 Identity = 94/180 (52.22%), Postives = 110/180 (61.11%), Query Frame = 1
BLAST of CmaCh02G016920 vs. TrEMBL
Match: M5VN09_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012203mg PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 2.7e-29 Identity = 96/186 (51.61%), Postives = 118/186 (63.44%), Query Frame = 1
BLAST of CmaCh02G016920 vs. TrEMBL
Match: A0A059AXB9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00807 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 3.5e-29 Identity = 87/182 (47.80%), Postives = 116/182 (63.74%), Query Frame = 1
BLAST of CmaCh02G016920 vs. TrEMBL
Match: B9S549_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1721300 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 3.6e-26 Identity = 86/185 (46.49%), Postives = 110/185 (59.46%), Query Frame = 1
BLAST of CmaCh02G016920 vs. TAIR10
Match: AT3G24750.1 (AT3G24750.1 unknown protein) HSP 1 Score: 63.9 bits (154), Expect = 1.1e-10 Identity = 53/140 (37.86%), Postives = 75/140 (53.57%), Query Frame = 1
BLAST of CmaCh02G016920 vs. NCBI nr
Match: gi|659109027|ref|XP_008454510.1| (PREDICTED: uncharacterized protein LOC103494908 [Cucumis melo]) HSP 1 Score: 242.3 bits (617), Expect = 6.4e-61 Identity = 135/181 (74.59%), Postives = 148/181 (81.77%), Query Frame = 1
BLAST of CmaCh02G016920 vs. NCBI nr
Match: gi|778682082|ref|XP_004152019.2| (PREDICTED: uncharacterized protein LOC101208427 [Cucumis sativus]) HSP 1 Score: 237.7 bits (605), Expect = 1.6e-59 Identity = 131/180 (72.78%), Postives = 145/180 (80.56%), Query Frame = 1
BLAST of CmaCh02G016920 vs. NCBI nr
Match: gi|700203207|gb|KGN58340.1| (hypothetical protein Csa_3G624080 [Cucumis sativus]) HSP 1 Score: 237.7 bits (605), Expect = 1.6e-59 Identity = 131/180 (72.78%), Postives = 145/180 (80.56%), Query Frame = 1
BLAST of CmaCh02G016920 vs. NCBI nr
Match: gi|694314470|ref|XP_009371329.1| (PREDICTED: uncharacterized protein LOC103960559 isoform X1 [Pyrus x bretschneideri]) HSP 1 Score: 144.4 bits (363), Expect = 1.8e-31 Identity = 97/194 (50.00%), Postives = 122/194 (62.89%), Query Frame = 1
BLAST of CmaCh02G016920 vs. NCBI nr
Match: gi|694314472|ref|XP_009371336.1| (PREDICTED: uncharacterized protein LOC103960559 isoform X2 [Pyrus x bretschneideri]) HSP 1 Score: 144.4 bits (363), Expect = 1.8e-31 Identity = 97/194 (50.00%), Postives = 122/194 (62.89%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |