CmoCh18G012400 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh18G012400
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	TraB family protein
Location	Cmo_Chr18 : 12228726 .. 12232274 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCAAACTCTATGGCCGTTAAAGCTCCCTTCTTTTTCTTATCTTCTTCATCCATGGAGTCTCTCAAATCCACGCCTATTCCCATTTTCAGGCCCTACCCATTTTCAATCGCGACCAAATCTGTGAAACCCATCAAGGTTTCCATTAGGCCGCCTCCATCGGACTTCGATTTCCGAGTTGAAATCTCTCGGGATTCCAGAGCCGCCATTGCTGAAGCTCACCCTGAGTTGCTTGATTTGGTTGACGATGGCACGTTGGTTTTGGTCGAGAAGAGGAGATTCGGCCCTGTCCCTGCTTGGAGAGCCGAATTTGTGGAGCCGGAAGCGATATGGTTGGTCGCAACTTCGCATATTTCGCCCAAATCGGTTAAGGATGTCGAGCGAGTGGTTCGAGCAGTGAAGCCCGATAATGTGGTCGTCGAGCTTTGCCGGAGCAGGCAAGTTTGATTTCCAATTTGGGGTTTTTTTTTTTGTCAGTAATTCAATATCCAAATCAAGCAAAGTAGTCTACATTGTTCTGAATTCATTCTTGTTCTGTATTTGCTTTCATTTACCAATTAAAAAGAATCAACATATCTGATGTGTTGAATTATTGCTTTGCTTTAAAAGAATGAACATCTTAAAACGATTCCAGACATTTGTTCCAGAGCTGGAATCATGTATACATTAGAAACTGGTGAGCCACACCAAAAACTAAAGTCCAACATGTTCTCCTTGAGTGGAGATGGTTTCTTGGGTGCTGTTGGTCGCAGCATAAACCTAGGTGAGGCTAACATTTTGTTTGTTTTTTTTGTTGGTTGTTGGCATATAAGCTGTCTAAAACTTGTCAATAATTCTTCAGGAGGCCAAACAGCTCTCGCTTTGCGCCTGCTTTTAGCTGCTTTTTCCTCCAAAATTTCTTCAGATGTCAACCGTCCTTTTGGCAGTGAGGTAACAGATCTTCAATTCACCAAGTAATGTTTAGACTAAGTTCATGAAACTCTCATCAATCATGCAGTTTCGGGCTGCTCGTAAAGCTTCTGAAGAAGTTGGTGCTCAAATAGTTCTAGGGGATCGACCAATTGAAATAACTGTATGTGCTTTTTTCCTGCAAGATTACACAATTTCTTGCTTTTCCTTTCCCTCTCAGTCACTTCAATTTGATTTGTTACACAATTTCTTGCTTTTCCTTTCCCTCTCAGTCACTTCAATTTGATTTGTTGATTGTGCAGCTAGAAAGGGCATGGAACGCTTTGACATGGAACCAGAAGTTGAGCTTAGTAAGCTCAGTTATCCGTGGAATAACTTCACAATCTAATGTTTCTCGGAGCAATGATGAGGTTCTTTCCCACCTGAAATCTTGTGAATTGTTTCTCAAAAAATTTAACTCGGCTTTAAACACGTCAATCATAAAGTATCTTGTTGATGATTGTTGGGAGGGAGTCCCACGTTGGCTAATTAGGGGTATGATCATGAGTTTCTAAGTAAACAACACTATCTCCACTAGATTGAGGCCTTTTGGGAACATGGATATAAAGCCATGAGAGCTTATACTCAAAGTTGACAATATCATACCACGGTAGAGAGCCGTGGTTCCAAACCTATCTCAGAAGTGATTCAGCCTTGGTTGCAAGATGTGAAGAAAATTTGTGTCCATAGCCATGCTTCCTAAGTTTTGAATAATAGGCCGGTTGAGATAGGAACTGGAGTCGGATGCAAAAGAAATGCATAGACTGGCTTACATACCATATCAGGAACATCCGACATAGATTTAAACATGTCTTTCTCAGGAGTTGAATCTAAGCTTTAAACATAGAGATCTGTATAATTAGACAATTCCTGTTACTATTTTCTTTTTTCTCATTTGCGATGATACATCGCTTCTTTTACTTAGGATCTTGTTTATTAATGTGAGATCTCACATCGATTGGAGAGAGGAACGAGTGTCAGCGAAGACGCTGGGACTCGAAGGGGGTGGATTGTGAGATCCCACATCGAATGGAGAGAGAAGTGAGTGTCAGCGAGGACGCTGGGTCCCGAAGGGGGTGGATCGTGAGATCCCACATCAGTTGGAGAGGGGAACGAAGCATTCTTTACAAGGGTGTTGAAACCTCTCCCCTCCCTAGCAAACGCGTTTTAAAAGCCTTGAGGAGAAACCCGAAAGGGAAAACCCAAAGATGACGATATCTGCTAGTTGTGTGCTTGAGCTGTTACAAATAGTATCAGAGCCAGACATTGGGCGATGTGCCAACGAGGACGCTGGTTCTCGAAGAGGGGTGAATTGTGAGATCCCACGTCGATTGGAGAGAGGAATGAAACATTCTTTATAAGAGTGTTGAAACTTCTCTCTAGAAACGCGTTTTAGAAACCTTGAGGGGAAACCCGAAAGGGAAAGTCCAAAGAAGACAATATTTGCTAGTGGTAAGCTTGGGTTGTTACAAATGGAATCAGAGCCGGACACCGAGCGGTGTGCCAACAAGGACGTTGAGCCTCGAAAGGGGGTGGACGCGGCGGTGTGCCAGTGAGGACGTTGGGCCTTGAAGGGGTTTGGATTATGAGATCCCACCTCGATTGGAGAGAGGAATGAAACATTGTTTATAAGAATGTTGAAACTTCTCCCTAGCAAATCGGTTTTAGAAACCTTGAGGGGAAACCCAAAAGGGAAAGTCCAAAGAGGACAATATCTATTAGTAGTGCGCTTGGGCTGTTATAAATGGCATCAGAGCCGGACACCGGGCGGTATGCTAACGAGGACGTTAAGCTCCGAAATGGGGTGGACACGATGGTGTGCTAGCGAGGACGCTGAGCCCCAAAGGGAGGTGAATTGTGAGATCCCACATCGATTGGAGAGGGAGAACGAAGAATTGTTTATAAGGGTGTTGAAACCTCTCCCTAGCAGACTCGTGGACGAATCATCATATCCTTCTTTTTCTTGAAGTTCGAATGTCGGTGCATGAATCACCATATCCTTCGTTTTGTGAATGTGCTTTTCAGGAAGCAGGTAGAGATGGGAGTTCCTTGCAGCTGTATGAGCAGCTCAGTTTTTCATATCCATCTCTTCTTCAACCTCTTATTCATGAACGAGACACTGTAAGTATAATCACATAATGCATTTACAGCTCTTACTTCTTACCTCTGTAAAGTTGTTAATAGCTGCATTTTCAGTACCTTGCATGGTCTCTAAAGCGAAGCAAGGCGGTGAACAAGAGTAAAAGGGTGGTGGGGGTGATTGGAAGAGGCCATATGAGCGGCGTCATCTATGCGATCATATCGGATCAAGGAGACTTGCGATTTCGAGACGTTGCAGGTAAGAGAGCTGGGGAAAGCTCCAATGGCTTTGTTAGCAGTCTGTTGCAGAGCTTGGTTAGAGACACTATCATTGGTGTTGTCTTCTGGGTTTTATATGAACAATTGAAACAACAACATTTAGTGCCTTAGCTGATCATCTTTCCAAACCATACCTCTGTAGAAAATCAATCCAAAAGTATACCATTCAAAACTTACATGTAAAGAGATGATTTGATCCTTATGTGTATTAGTCCATTTTTCAATAAATCATTTGAAAATTGAT

mRNA sequence

CCCCAAACTCTATGGCCGTTAAAGCTCCCTTCTTTTTCTTATCTTCTTCATCCATGGAGTCTCTCAAATCCACGCCTATTCCCATTTTCAGGCCCTACCCATTTTCAATCGCGACCAAATCTGTGAAACCCATCAAGGTTTCCATTAGGCCGCCTCCATCGGACTTCGATTTCCGAGTTGAAATCTCTCGGGATTCCAGAGCCGCCATTGCTGAAGCTCACCCTGAGTTGCTTGATTTGGTTGACGATGGCACGTTGGTTTTGGTCGAGAAGAGGAGATTCGGCCCTGTCCCTGCTTGGAGAGCCGAATTTGTGGAGCCGGAAGCGATATGGTTGGTCGCAACTTCGCATATTTCGCCCAAATCGGTTAAGGATGTCGAGCGAGTGGTTCGAGCAGTGAAGCCCGATAATGTGGTCGTCGAGCTTTGCCGGAGCAGAGCTGGAATCATGTATACATTAGAAACTGGTGAGCCACACCAAAAACTAAAGTCCAACATGTTCTCCTTGAGTGGAGATGGTTTCTTGGGTGCTGTTGGTCGCAGCATAAACCTAGGAGGCCAAACAGCTCTCGCTTTGCGCCTGCTTTTAGCTGCTTTTTCCTCCAAAATTTCTTCAGATGTCAACCGTCCTTTTGGCAGTGAGTTTCGGGCTGCTCGTAAAGCTTCTGAAGAAGTTGGTGCTCAAATAGTTCTAGGGGATCGACCAATTGAAATAACTCTAGAAAGGGCATGGAACGCTTTGACATGGAACCAGAAGTTGAGCTTAGTAAGCTCAGTTATCCGTGGAATAACTTCACAATCTAATGTTTCTCGGAGCAATGATGAGGAAGCAGGTAGAGATGGGAGTTCCTTGCAGCTGTATGAGCAGCTCAGTTTTTCATATCCATCTCTTCTTCAACCTCTTATTCATGAACGAGACACTTACCTTGCATGGTCTCTAAAGCGAAGCAAGGCGGTGAACAAGAGTAAAAGGGTGGTGGGGGTGATTGGAAGAGGCCATATGAGCGGCGTCATCTATGCGATCATATCGGATCAAGGAGACTTGCGATTTCGAGACGTTGCAGGTAAGAGAGCTGGGGAAAGCTCCAATGGCTTTGTTAGCAGTCTGTTGCAGAGCTTGGTTAGAGACACTATCATTGGTGTTGTCTTCTGGGTTTTATATGAACAATTGAAACAACAACATTTAGTGCCTTAGCTGATCATCTTTCCAAACCATACCTCTGTAGAAAATCAATCCAAAAGTATACCATTCAAAACTTACATGTAAAGAGATGATTTGATCCTTATGTGTATTAGTCCATTTTTCAATAAATCATTTGAAAATTGAT

Coding sequence (CDS)

ATGGCCGTTAAAGCTCCCTTCTTTTTCTTATCTTCTTCATCCATGGAGTCTCTCAAATCCACGCCTATTCCCATTTTCAGGCCCTACCCATTTTCAATCGCGACCAAATCTGTGAAACCCATCAAGGTTTCCATTAGGCCGCCTCCATCGGACTTCGATTTCCGAGTTGAAATCTCTCGGGATTCCAGAGCCGCCATTGCTGAAGCTCACCCTGAGTTGCTTGATTTGGTTGACGATGGCACGTTGGTTTTGGTCGAGAAGAGGAGATTCGGCCCTGTCCCTGCTTGGAGAGCCGAATTTGTGGAGCCGGAAGCGATATGGTTGGTCGCAACTTCGCATATTTCGCCCAAATCGGTTAAGGATGTCGAGCGAGTGGTTCGAGCAGTGAAGCCCGATAATGTGGTCGTCGAGCTTTGCCGGAGCAGAGCTGGAATCATGTATACATTAGAAACTGGTGAGCCACACCAAAAACTAAAGTCCAACATGTTCTCCTTGAGTGGAGATGGTTTCTTGGGTGCTGTTGGTCGCAGCATAAACCTAGGAGGCCAAACAGCTCTCGCTTTGCGCCTGCTTTTAGCTGCTTTTTCCTCCAAAATTTCTTCAGATGTCAACCGTCCTTTTGGCAGTGAGTTTCGGGCTGCTCGTAAAGCTTCTGAAGAAGTTGGTGCTCAAATAGTTCTAGGGGATCGACCAATTGAAATAACTCTAGAAAGGGCATGGAACGCTTTGACATGGAACCAGAAGTTGAGCTTAGTAAGCTCAGTTATCCGTGGAATAACTTCACAATCTAATGTTTCTCGGAGCAATGATGAGGAAGCAGGTAGAGATGGGAGTTCCTTGCAGCTGTATGAGCAGCTCAGTTTTTCATATCCATCTCTTCTTCAACCTCTTATTCATGAACGAGACACTTACCTTGCATGGTCTCTAAAGCGAAGCAAGGCGGTGAACAAGAGTAAAAGGGTGGTGGGGGTGATTGGAAGAGGCCATATGAGCGGCGTCATCTATGCGATCATATCGGATCAAGGAGACTTGCGATTTCGAGACGTTGCAGGTAAGAGAGCTGGGGAAAGCTCCAATGGCTTTGTTAGCAGTCTGTTGCAGAGCTTGGTTAGAGACACTATCATTGGTGTTGTCTTCTGGGTTTTATATGAACAATTGAAACAACAACATTTAGTGCCTTAG

Homology

[Close]

BLAST of CmoCh18G012400 vs. Swiss-Prot
Match: TRABD_BOVIN (TraB domain-containing protein OS=Bos taurus GN=TRABD PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 6.8e-18
Identity = 89/310 (28.71%), Postives = 151/310 (48.71%), Query Frame = 1


Query: 48  PPSDFDFRVEISRDSRAAIAEA---HPELLDLVDDGTLVL---VEKRRFGP-VPAWRAEF 107
           PP + D    ++  +  A+       P+ L  VD   L+L   +++RR  P +P    E 
Sbjct: 8   PPHEADTEPVVTSGASEAVPRVLPGDPQNLSDVDAFNLLLEMKLKRRRERPNLPHTVTEL 67

Query: 108 VEPEA--IWLVATSHISPKSVKDVERVVRAVKPDNVVVELCRSRAGIMYTLETGEPHQKL 167
           V  +   +++V T+H S  S +DV + +R V+PD VVVELC+ R  +   L+  E     
Sbjct: 68  VAEDGSRVYVVGTAHFSDDSKRDVVKTIREVQPDVVVVELCQYRVSM---LKMDERTLLR 127

Query: 168 KSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAAFSSKISSDVNRPFGSEFRAA-RKA 227
           ++   SL        + ++I   G  +  +++LL   S+ I+  +    G EFR A ++A
Sbjct: 128 EAKEISLE------KLQQAIRQNGVASGLMQMLLLKVSAHITEQLGVAPGGEFREAFKEA 187

Query: 228 SEEVGAQIVLGDRPIEITLERAWNALTWNQKLSLVSSVIRGITSQSNVSRSNDEEAGRDG 287
           S     +  LGDRPI +T +RA  AL+  QK+ L      G+   S+    +D E  +  
Sbjct: 188 SRVPFCKFHLGDRPIPVTFKRAIAALSLWQKVKLA----WGLCFLSDPISKDDVERCKQK 247

Query: 288 SSL-QLYEQLSFSYPSLLQPLIHERDTYLAWSLKRS-------KAVNKSKR------VVG 334
             L Q+  ++   +P L + ++ ERD YL + L+++       +A +   R      VVG
Sbjct: 248 DLLEQMMAEMVGEFPDLHRTIVSERDVYLTYMLRQAARRLELPRASDAEPRKCVPSVVVG 304

[Close]

BLAST of CmoCh18G012400 vs. Swiss-Prot
Match: TRABD_HUMAN (TraB domain-containing protein OS=Homo sapiens GN=TRABD PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.2e-17
Identity = 82/289 (28.37%), Postives = 145/289 (50.17%), Query Frame = 1


Query: 66  IAEAHPELLDLVDDGTLVL---VEKRRFGP-VPAWRAEFVEPEA--IWLVATSHISPKSV 125
           +    P+ L  VD   L+L   +++RR  P +P    + V  +   +++V T+H S  S 
Sbjct: 29  VLSGDPQNLSDVDAFNLLLEMKLKRRRQRPNLPRTVTQLVAEDGSRVYVVGTAHFSDDSK 88

Query: 126 KDVERVVRAVKPDNVVVELCRSRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSIN 185
           +DV + +R V+PD VVVELC+ R  ++   E         S +   + +  L  + +++ 
Sbjct: 89  RDVVKTIREVQPDVVVVELCQYRVSMLKMDE---------STLLREAQELSLEKLQQAVR 148

Query: 186 LGGQTALALRLLLAAFSSKISSDVNRPFGSEFRAA-RKASEEVGAQIVLGDRPIEITLER 245
             G  +  +++LL   S+ I+  +    G EFR A ++AS+    +  LGDRPI +T +R
Sbjct: 149 QNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFKR 208

Query: 246 AWNALTWNQKLSLVSSVIRGITSQSNVSRSNDEEAGRDGSSL-QLYEQLSFSYPSLLQPL 305
           A  AL++ QK+ L      G+   S+    +D E  +    L Q+  ++   +P L + +
Sbjct: 209 AIAALSFWQKVRLA----WGLCFLSDPISKDDVERCKQKDLLEQMMAEMIGEFPDLHRTI 268

Query: 306 IHERDTYLAWSLKRS-------KAVNKSKR------VVGVIGRGHMSGV 334
           + ERD YL + L+++       +A +   R      VVGV+G GH+ G+
Sbjct: 269 VSERDVYLTYMLRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGI 304

[Close]

BLAST of CmoCh18G012400 vs. Swiss-Prot
Match: TRABD_MOUSE (TraB domain-containing protein OS=Mus musculus GN=Trabd PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.6e-17
Identity = 80/284 (28.17%), Postives = 142/284 (50.00%), Query Frame = 1


Query: 71  PELLDLVDDGTLVL---VEKRRFGP-VPAWRAEFVEPEA--IWLVATSHISPKSVKDVER 130
           P+ +  VD   L+L   +++RR  P +P    + V  +   +++V T+H S  S +DV +
Sbjct: 33  PQNISDVDAFNLLLEMKLKRRRERPNLPRTVTQLVAEDGSRVYVVGTAHFSDDSKRDVVK 92

Query: 131 VVRAVKPDNVVVELCRSRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINLGGQT 190
            +R V+PD VVVELC+ R  ++   E     +  + ++  L          +++   G  
Sbjct: 93  TIREVQPDVVVVELCQYRVSMLKMDERTLLREAKEVSLEKLQ---------QAVRQNGLM 152

Query: 191 ALALRLLLAAFSSKISSDVNRPFGSEFRAARKASEEVG-AQIVLGDRPIEITLERAWNAL 250
           +  +++LL   S+ I+  +    G EFR A K + +V   +  LGDRPI +T +RA  AL
Sbjct: 153 SGLMQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAAL 212

Query: 251 TWNQKLSLVSSVIRGITSQSNVSRSNDEEAGRDGSSL-QLYEQLSFSYPSLLQPLIHERD 310
           ++ QK+ L      G+   S+    +D E  +    L Q+  ++   +P L + ++ ERD
Sbjct: 213 SFWQKVKLA----WGLCFLSDPISKDDVERCKQKDLLEQMMAEMIGEFPDLHRTIVSERD 272

Query: 311 TYLAWSLKRS-------KAVNKSKR------VVGVIGRGHMSGV 334
            YL + L+++       +A +   R      VVGV+G GH+ G+
Sbjct: 273 VYLTYMLRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGI 303

[Close]

BLAST of CmoCh18G012400 vs. Swiss-Prot
Match: Y1365_METJA (Uncharacterized protein MJ1365 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1365 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 8.6e-13
Identity = 69/293 (23.55%), Postives = 140/293 (47.78%), Query Frame = 1


Query: 106 IWLVATSHISPKSVKDVERVVRAVKPDNVVVELCRSRAGIMYTLETGEPHQKLKSNMFSL 165
           I+L+ T+H+S  S+++VE+++ +V P+ + VEL   R   + T E  E    LK      
Sbjct: 19  IYLIGTAHVSKDSIEEVEKIISSVSPEGIAVELDDRRFFSLITNE--EKKVDLK------ 78

Query: 166 SGDGFLGAVGRSINLGGQTALALRLLLAAFSSKISSDVNRPFGSEFRAARKASEEVGAQI 225
                     + +  G      + L+LA    KI        GSE + A + + + G  I
Sbjct: 79  ----------KVLKEGNFLKFFIYLILANSQKKIGESFGIKPGSEMKKAIEIASKYGLPI 138

Query: 226 VLGDRPIEITLERAWNALTWNQKLSLVSSVIRGITSQSNVSRSND---EEAGRDGSSLQL 285
            L DR I+ITL R  + +T+ +K+ +   ++   + + ++   +D   +        ++L
Sbjct: 139 YLIDRDIDITLSRLMDRMTFKEKMKIFWELLN--SDEEDLELDDDLLNDMVKNPEKFIKL 198

Query: 286 YEQLSFSYPSLLQPLIHERDTYLAWSLKRSKAVNKSKR-VVGVIGRGHMSGVIYAI--IS 345
            +++S   P++ + L+ ERD ++A   KR   ++K+K  +V V+G GH+ G++  +  + 
Sbjct: 199 LKEIS---PTIYEVLVDERDRFMA---KRLFELSKNKNSLVAVVGAGHVEGIVRYLKKLE 258

Query: 346 DQGDLRFRDVAGKRAGESSNGFVSSLLQSLVRDTIIGVVFWVLYEQLKQQHLV 393
           +  D+   ++   +  + S   +  LL   +  TII +  +++   L    L+
Sbjct: 259 NGNDIDLMELIKVKKRKKS---LKKLLTYGISLTIISIFLYMICYALNNPELL 282

[Close]

BLAST of CmoCh18G012400 vs. TrEMBL
Match: V4RLJ8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005112mg PE=4 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 8.0e-151
Identity = 273/379 (72.03%), Postives = 323/379 (85.22%), Query Frame = 1


Query: 10  LSSSSMESLKSTPIPIFRPYPFSIATKSVKPIKVSIRPPPSDFDFRVEISRDSRAAIAEA 69
           L  +SME+ +    PIF   P  ++TK +KP KVSI+PPP DFDFR EI  DS+A IA+A
Sbjct: 16  LRLTSMEAFQKATFPIFSANPNLLSTKPIKPFKVSIKPPPQDFDFRTEILSDSQATIAKA 75

Query: 70  HPELLDLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAV 129
            PELL+L DDGTLVL++KR+FGPVPAWR+EFVEPE IWL+ T+H+S  S  DVERVVRA+
Sbjct: 76  CPELLNLADDGTLVLIQKRQFGPVPAWRSEFVEPENIWLIGTTHLSQDSAADVERVVRAI 135

Query: 130 KPDNVVVELCRSRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALR 189
           KPDNVVVELCRSRAGIMYT   GE  Q+L+SNMFSLSG GF GAVGRSI+LGGQTALALR
Sbjct: 136 KPDNVVVELCRSRAGIMYTSNGGENDQQLRSNMFSLSGTGFFGAVGRSIDLGGQTALALR 195

Query: 190 LLLAAFSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWNQKL 249
           LLLA FSSKISSDVNRPFG EFRAARK +EEVGAQIVLGDRPIEITLERAWN+L WN+KL
Sbjct: 196 LLLALFSSKISSDVNRPFGDEFRAARKVAEEVGAQIVLGDRPIEITLERAWNSLKWNEKL 255

Query: 250 SLVSSVIRGITSQSNVSRSNDEEAGRDGSSLQLYEQLSFSYPSLLQPLIHERDTYLAWSL 309
           +L+ +VIRGIT  S++S  N +E   D S+ QLY++LSFS PSLL PLIHERDTYLAWSL
Sbjct: 256 NLLINVIRGITLPSDMSLDNLKEPSPDDSTFQLYKKLSFSCPSLLLPLIHERDTYLAWSL 315

Query: 310 KRSKAVNKSKRVVGVIGRGHMSGVIYAIISDQGDLRFRDVAGKR-AGESSNGFVSSLLQS 369
           KRSKAVN SK+VVGVIG+GHM+GVIYA++SDQG+LRFRD+AGKR +G+ SNG+++SLL+S
Sbjct: 316 KRSKAVNNSKKVVGVIGKGHMNGVIYALVSDQGNLRFRDLAGKRSSGDGSNGWIASLLKS 375

Query: 370 LVRDTIIGVVFWVLYEQLK 388
           LVRDT+IG++ W LYEQ+K
Sbjct: 376 LVRDTVIGILLWALYEQVK 394

[Close]

BLAST of CmoCh18G012400 vs. TrEMBL
Match: B9I4F6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s13890g PE=4 SV=2)

HSP 1 Score: 540.8 bits (1392), Expect = 1.4e-150
Identity = 272/375 (72.53%), Postives = 318/375 (84.80%), Query Frame = 1


Query: 15  MESLKSTPIPIFRPYPFSIATKSVKPIKVSIRPPPSDFDFRVEISRDSRAAIAEAHPELL 74
           ME+L   P PIF   P  + TK  KP+KVSI+PPP DFDFR EI ++SRA I+  +PELL
Sbjct: 1   METLLKIPFPIFSNNPHILTTKPTKPLKVSIKPPPPDFDFRSEILQESRATISRTYPELL 60

Query: 75  DLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNV 134
           DL +DGTL+L+EK+ FGPVP+WR EFVEPEAIWLV T+HIS +S  +VERVVRAVKPDNV
Sbjct: 61  DLANDGTLLLIEKKIFGPVPSWRTEFVEPEAIWLVGTTHISSQSAAEVERVVRAVKPDNV 120

Query: 135 VVELCRSRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAA 194
           VVELCRSRAGIMY  + GE  Q+L+S+MFSLSG GF GAVGRSINLGGQTALALRLLLA 
Sbjct: 121 VVELCRSRAGIMYISDEGEVGQQLRSSMFSLSGTGFFGAVGRSINLGGQTALALRLLLAL 180

Query: 195 FSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWNQKLSLVSS 254
           FSSKISSDVNRPFG EFRAARK +EE+GAQIVLGDRPIEITLERAWN+L W +KLSLV +
Sbjct: 181 FSSKISSDVNRPFGDEFRAARKVAEEIGAQIVLGDRPIEITLERAWNSLKWREKLSLVIA 240

Query: 255 VIRGITSQSNVSRSNDEEAGRDGSSLQLYEQLSFSYPSLLQPLIHERDTYLAWSLKRSKA 314
           V+RGITS S++S++N + +  D  + QLYEQLSFSYPSLLQPLIHERDTYLAWSLKRSKA
Sbjct: 241 VVRGITSSSDISKNNFKASSTDDRTFQLYEQLSFSYPSLLQPLIHERDTYLAWSLKRSKA 300

Query: 315 VNKSKRVVGVIGRGHMSGVIYAIISDQGDLRFRDVAGKRAG--ESSNGFVSSLLQSLVRD 374
           VN  KRVVGVIG+GHM+GVIYA+ISDQG+LRFRD+AG+R+   + SNGFV+ L++SLV D
Sbjct: 301 VNNGKRVVGVIGKGHMNGVIYALISDQGNLRFRDLAGRRSSGDDGSNGFVAGLVKSLVID 360

Query: 375 TIIGVVFWVLYEQLK 388
           T IG++ W LYEQLK
Sbjct: 361 TAIGILLWQLYEQLK 375

[Close]

BLAST of CmoCh18G012400 vs. TrEMBL
Match: A0A067FA70_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017036mg PE=4 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 3.1e-150
Identity = 271/374 (72.46%), Postives = 320/374 (85.56%), Query Frame = 1


Query: 15  MESLKSTPIPIFRPYPFSIATKSVKPIKVSIRPPPSDFDFRVEISRDSRAAIAEAHPELL 74
           ME+ +    PIF   P  ++TK +KP KVSI+PPP DFDFR EI  DS+A IA+A PELL
Sbjct: 1   MEAFQKATFPIFSANPNLLSTKPIKPFKVSIKPPPQDFDFRTEILSDSQATIAKACPELL 60

Query: 75  DLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNV 134
           +L DDGTLVL++KR+FGPVPAWR+EFVEPE IWL+ T+H+S  S  DVERVVRA+KPDNV
Sbjct: 61  NLADDGTLVLIQKRQFGPVPAWRSEFVEPENIWLIGTTHLSQDSAADVERVVRAIKPDNV 120

Query: 135 VVELCRSRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAA 194
           VVELCRSRAGIMYT   GE  Q+L+SNMFSLSG GF GAVGRSI+LGGQTALALRLLLA 
Sbjct: 121 VVELCRSRAGIMYTSNGGENDQQLRSNMFSLSGTGFFGAVGRSIDLGGQTALALRLLLAL 180

Query: 195 FSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWNQKLSLVSS 254
           FSSKISSDVNRPFG EFRAARK +EEVGAQIVLGDRPIEITLERAWN+L WN+KL+L+ +
Sbjct: 181 FSSKISSDVNRPFGDEFRAARKVAEEVGAQIVLGDRPIEITLERAWNSLKWNEKLNLLIN 240

Query: 255 VIRGITSQSNVSRSNDEEAGRDGSSLQLYEQLSFSYPSLLQPLIHERDTYLAWSLKRSKA 314
           VIRGITS S++S  N +E   D S+ QLY++LSFS PSLL PLIHERD YLAWSLKRSKA
Sbjct: 241 VIRGITSPSDMSLDNLKEPSPDDSTFQLYKKLSFSCPSLLLPLIHERDKYLAWSLKRSKA 300

Query: 315 VNKSKRVVGVIGRGHMSGVIYAIISDQGDLRFRDVAGKR-AGESSNGFVSSLLQSLVRDT 374
           VN SK+VVGVIG+GHM+GVIYA++SDQG+LRFRD+AGKR +G+ SNG+++SLL+SLVRDT
Sbjct: 301 VNNSKKVVGVIGKGHMNGVIYALVSDQGNLRFRDLAGKRPSGDGSNGWIASLLKSLVRDT 360

Query: 375 IIGVVFWVLYEQLK 388
           +IG++ W LYEQ+K
Sbjct: 361 VIGILLWALYEQVK 374

[Close]

BLAST of CmoCh18G012400 vs. TrEMBL
Match: B9R9G9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1497430 PE=4 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 1.1e-147
Identity = 274/387 (70.80%), Postives = 313/387 (80.88%), Query Frame = 1


Query: 15  MESLKSTPIPIFRPYPFSIATKSVKPIKVSIRPPPSDFDFRVEISRDSRAAIAEAHPELL 74
           M++L ++  PIF  YP    +K  KP+KVSI+PPP DFDFR EI ++SR  IA+ HP+LL
Sbjct: 1   MDTLLNSTFPIFSKYPNFPISKPAKPLKVSIKPPPPDFDFRSEILQESRTTIAKNHPDLL 60

Query: 75  DLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNV 134
           DL D G L+L+EKR FGPVPAWR EFVEPEAIWLV TSHIS +S   VERVVRAVKPDNV
Sbjct: 61  DLADSGNLILIEKRLFGPVPAWRTEFVEPEAIWLVGTSHISTESATQVERVVRAVKPDNV 120

Query: 135 VVELCRSR-------------AGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINLG 194
           VVELCRSR             AGIMYT   GE +Q+L+SNMFSLSG+GF GAVGRSINLG
Sbjct: 121 VVELCRSRQVLFLFMLIYKIKAGIMYTSNEGEDNQQLRSNMFSLSGNGFFGAVGRSINLG 180

Query: 195 GQTALALRLLLAAFSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAWN 254
           GQTALALRLLLA FSSKIS+DVNRPFG EFRAARK SEE+GAQIVLGDRPIEITLERAWN
Sbjct: 181 GQTALALRLLLALFSSKISNDVNRPFGDEFRAARKVSEEIGAQIVLGDRPIEITLERAWN 240

Query: 255 ALTWNQKLSLVSSVIRGITSQSNVSRSNDEEAGRDGSSLQLYEQLSFSYPSLLQPLIHER 314
           AL W +KLSLVSSV+RGITS S+ S+ + +    D  +  LYE+LSFSYPSLL PLIHER
Sbjct: 241 ALKWKEKLSLVSSVVRGITSSSHTSKKDFKVPDTDDDTFLLYEKLSFSYPSLLPPLIHER 300

Query: 315 DTYLAWSLKRSKAVNKSKRVVGVIGRGHMSGVIYAIISDQGDLRFRDVAGKR-AGESSNG 374
           DTYLAWSLKRSKAVN SKRVVGVIG+GHM+GVIYA++SD G+LRFRD+ G+R +G  S G
Sbjct: 301 DTYLAWSLKRSKAVNNSKRVVGVIGKGHMNGVIYALVSDLGNLRFRDLVGQRQSGSGSKG 360

Query: 375 FVSSLLQSLVRDTIIGVVFWVLYEQLK 388
            V  LL+SLVRDT+IGVV WVLYEQ+K
Sbjct: 361 IVDELLKSLVRDTVIGVVLWVLYEQIK 387

[Close]

BLAST of CmoCh18G012400 vs. TrEMBL
Match: A0A0D2Q3D2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G046300 PE=4 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 6.0e-146
Identity = 266/375 (70.93%), Postives = 317/375 (84.53%), Query Frame = 1


Query: 15  MESLKSTPIPIFRPYPFSIATKSVKPIKVSIRPPPSDFDFRVEISRDSRAAIAEAHPELL 74
           M++L  +  PIF   P  ++TK VKP+KVSI+PPP DFDFR +I  +S A I + +P+L+
Sbjct: 1   MDALLKSSFPIFSANPKFLSTKHVKPLKVSIKPPPPDFDFRADILAESTAKIGQTYPQLV 60

Query: 75  DLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNV 134
           DL ++GTLVLVEKR+FGPVPAWR EFVEPEAIWL+ T+HISP+S  DVERVVRAV+PDNV
Sbjct: 61  DLAENGTLVLVEKRQFGPVPAWRTEFVEPEAIWLLGTTHISPESASDVERVVRAVRPDNV 120

Query: 135 VVELCRSRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAA 194
           VVELCRSRAGIMY     E  ++L+SNMFSLSG GF GAVGRSINLGGQTALALRLLLA 
Sbjct: 121 VVELCRSRAGIMYISSGVENGEQLRSNMFSLSGTGFFGAVGRSINLGGQTALALRLLLAL 180

Query: 195 FSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWNQKLSLVSS 254
           FSSK+SSD+NRPFG EFRAARKASEEVGAQIVLGDRPIEITLERAWN+L W++K+ LV S
Sbjct: 181 FSSKLSSDLNRPFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNSLKWSEKVILVLS 240

Query: 255 VIRGITS-QSNVSRSNDEEAGRDGSSLQLYEQLSFSYPSLLQPLIHERDTYLAWSLKRSK 314
           VIRGITS  S++S+++  E   +  + QLYE+LSFSYPSLLQPL+HERDTYLAWSLKRSK
Sbjct: 241 VIRGITSPSSDISKNDLLEQNYENDTFQLYERLSFSYPSLLQPLVHERDTYLAWSLKRSK 300

Query: 315 AVNKSKRVVGVIGRGHMSGVIYAIISDQGDLRFRDVAGKRAGES-SNGFVSSLLQSLVRD 374
           AVNK K VVGVIG+GHM+GVIYA++SDQG+LRFRD+AGK   E+ SNG+V  LL+SL RD
Sbjct: 301 AVNKCKTVVGVIGKGHMNGVIYALVSDQGNLRFRDLAGKTPSEAESNGWVQRLLKSLARD 360

Query: 375 TIIGVVFWVLYEQLK 388
           T+IG++ W LYEQ+K
Sbjct: 361 TLIGILLWALYEQIK 375

[Close]

BLAST of CmoCh18G012400 vs. TAIR10
Match: AT5G52030.2 (AT5G52030.2 TraB family protein)

HSP 1 Score: 469.9 bits (1208), Expect = 1.5e-132
Identity = 248/385 (64.42%), Postives = 294/385 (76.36%), Query Frame = 1


Query: 21  TPIPIFRPYPFSIATKSVKPIKVSIRPPPSDFDFRVEISRDSRAAIAEAHPELLDLVDDG 80
           T  P F PY      + +K + VS++ PP DFDFR +I+ +SRAAIA+ +PELLDL D+G
Sbjct: 10  TLFPFFTPYTSKHIFRPIK-VSVSVQTPPPDFDFRNDIASESRAAIAKTYPELLDLADNG 69

Query: 81  TLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNVVVELCR 140
           TL+L++K+ FGPVPAWR EFVEPEAIWLV TSHISP+S   VERVVR VKPDNV VELCR
Sbjct: 70  TLILLQKQSFGPVPAWRKEFVEPEAIWLVGTSHISPESASIVERVVRTVKPDNVAVELCR 129

Query: 141 SR-----------AGIMYTLETG-EPHQKLKSNMFSLSGDGFLGAVGRSINLGGQTALAL 200
           SR           AGIMYT   G E  Q LKS   SL+G GFLGAVGRS++LGGQTALAL
Sbjct: 130 SRKVQFFIQTKFGAGIMYTSSVGGEVDQNLKSGELSLTGTGFLGAVGRSLDLGGQTALAL 189

Query: 201 RLLLAAFSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWNQK 260
           RLLLA FSSK+SS  +RPFG EFRAARKASEEVGAQ+VLGDRPIEITL+RAWN+L W +K
Sbjct: 190 RLLLAVFSSKLSSVADRPFGDEFRAARKASEEVGAQLVLGDRPIEITLQRAWNSLKWGEK 249

Query: 261 LSLVSSVIRGITSQSNVSRS--NDEEAGRDGSSLQLYEQLSFSYPSLLQPLIHERDTYLA 320
            +LV +V R ITS S +S +   ++E   +  SLQLYE+LSFSYP+LL PLIHERDTYLA
Sbjct: 250 FNLVMAVTRVITSSSGISAAELKEQETDENSGSLQLYERLSFSYPALLMPLIHERDTYLA 309

Query: 321 WSLKRSKAVNKSKRVVGVIGRGHMSGVIYAIISDQGDLRFRDVAGK------RAGESSNG 380
           WSLKRSKAVN  K VVGVIG+GHM+GVIYA++SD GDLRFRD+ G+        G +SNG
Sbjct: 310 WSLKRSKAVNGCKTVVGVIGKGHMNGVIYALVSDSGDLRFRDLVGRGDSYNGGTGTTSNG 369

Query: 381 FVSSLLQSLVRDTIIGVVFWVLYEQ 386
           ++  +L+S VRDTIIG + W LYEQ
Sbjct: 370 WIQKVLKSFVRDTIIGFLLWELYEQ 393

[Close]

BLAST of CmoCh18G012400 vs. TAIR10
Match: AT2G32340.1 (AT2G32340.1 TraB family protein)

HSP 1 Score: 100.5 bits (249), Expect = 2.4e-21
Identity = 71/235 (30.21%), Postives = 122/235 (51.91%), Query Frame = 1


Query: 106 IWLVATSHISPKSVKDVERVVRAVKPDNVVVELCRSRAGIMYTLETGEPHQKLKSNMFSL 165
           ++LV T+H+S +S ++VE V+ A+KP  V +ELC SR  I+         Q+  + M   
Sbjct: 97  VYLVGTAHVSQESCREVEAVISALKPQAVFLELCSSRLSILTPQTVKVCCQEPPTWM--- 156

Query: 166 SGDGFLGAVGRSINLGGQTALALRLLLAAFSSKISSDVNRPFGSEFRAARKASEEVGAQI 225
                       I +  +      ++     +K +  +    G+EFR   + + + G ++
Sbjct: 157 ----------EMIYMWKKKHNLFEIVYGYILAKAAKKLEVFPGAEFRVGFEEANKYGGRV 216

Query: 226 VLGDRPIEITLERAWNALTWNQKLSLVSSVIRGITSQSNVSRSNDEEAGR------DGSS 285
            LGDR ++ITL+R W  +    K+ LV S++    SQ+ V   N +E  +      DG  
Sbjct: 217 FLGDRSVQITLQRTWGKMPLWHKIKLVYSIV----SQA-VFLPNPKELEKMLKDLGDGDM 276

Query: 286 LQL-YEQLSFSYPSLLQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMSGV 334
           L L  +++S  +P+L++ L+HERD Y+A+ L R  + + S  VV V+GRGH+ G+
Sbjct: 277 LTLAIQEMSTEFPTLMETLVHERDKYMAYQLLRIASEHSS--VVAVVGRGHLQGI 311

[Close]

BLAST of CmoCh18G012400 vs. TAIR10
Match: AT1G05270.1 (AT1G05270.1 TraB family protein)

HSP 1 Score: 99.0 bits (245), Expect = 7.0e-21
Identity = 67/230 (29.13%), Postives = 117/230 (50.87%), Query Frame = 1


Query: 106 IWLVATSHISPKSVKDVERVVRAVKPDNVVVELCRSRAGIMYTLETGEPHQKLKSNMFSL 165
           ++LV T+H+S +S  +VE ++  +KP+ V VELC SR  ++         Q LK      
Sbjct: 111 VYLVGTAHVSKQSCLEVEAIISILKPEVVFVELCSSRLSVLKP-------QTLK------ 170

Query: 166 SGDGFLGAVGRSINLGGQTALALRLLLAAFSSKISSDVNRPFGSEFRAARKASEEVGAQI 225
                +  +   I    Q      +L   F +KI+S +    G+EFR A + + + G ++
Sbjct: 171 -----IPTMSDMIESWKQKQNTFGILYGWFLAKIASHLEVFPGAEFRVAYEEAIKYGGKV 230

Query: 226 VLGDRPIEITLERAWNALTWNQKLSLVSSVIRGITSQSNVSRSNDEEAGRDGSSL--QLY 285
           +LGDRP++ITL+R W  +    K+  + S++                   D   +   + 
Sbjct: 231 ILGDRPVQITLKRTWAKMPLWHKVKFLYSILFQAVFLPGAEELEKMLKDMDNVDMVTLVI 290

Query: 286 EQLSFSYPSLLQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMSGV 334
           +++S  +P+L+  ++HERD Y+A SL R  + + S  VV VIG+GH++G+
Sbjct: 291 QEMSKEFPTLMDTIVHERDQYMASSLLRVASDHSS--VVAVIGKGHINGI 320

[Close]

BLAST of CmoCh18G012400 vs. NCBI nr
Match: gi|449446067|ref|XP_004140793.1| (PREDICTED: traB domain-containing protein isoform X1 [Cucumis sativus])

HSP 1 Score: 643.3 bits (1658), Expect = 2.8e-181
Identity = 336/402 (83.58%), Postives = 361/402 (89.80%), Query Frame = 1


Query: 1   MAVKAPFFFLSSSS--------MESLKSTPIPIFRPYPFSIATKSVKPIKVSIRPPPSDF 60
           MAVK   FFLSSSS        ME+LKST IPIF+  P S  TKS+KPI VSI PPPSDF
Sbjct: 1   MAVKGRSFFLSSSSPSISLLSSMEALKSTAIPIFKSSPLSFPTKSLKPINVSINPPPSDF 60

Query: 61  DFRVEISRDSRAAIAEAHPELLDLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATS 120
           DFR+EISRDSRA IAE HPELLDL DDG LVLV+K +FGPVPAWRAEFVEP+AIWLV TS
Sbjct: 61  DFRLEISRDSRATIAETHPELLDLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTS 120

Query: 121 HISPKSVKDVERVVRAVKPDNVVVELCRSRAGIMYTLETGEPHQKLKSNMFSLSGDGFLG 180
           HISPKSVKDVERVVRAVKPDNVVVELCRSRAGIMYTL+TGEP QKLKSNMFSLSGDGFLG
Sbjct: 121 HISPKSVKDVERVVRAVKPDNVVVELCRSRAGIMYTLDTGEPDQKLKSNMFSLSGDGFLG 180

Query: 181 AVGRSINLGGQTALALRLLLAAFSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPI 240
           AV RSINLGGQTALALRLLLA FSSKISSDVNRPFG EFRAARKASEEVGAQIVLGDRPI
Sbjct: 181 AVVRSINLGGQTALALRLLLAVFSSKISSDVNRPFGDEFRAARKASEEVGAQIVLGDRPI 240

Query: 241 EITLERAWNALTWNQKLSLVSSVIRGITSQSNVSRSNDEEAGRDGSSLQLYEQLSFSYPS 300
           EITLERAWNAL W +KLSLVSSVIRGITS+S+ S++ DEE+  +GSSLQLYE+L FSYPS
Sbjct: 241 EITLERAWNALIWTEKLSLVSSVIRGITSESDFSQNIDEESDGNGSSLQLYEKLGFSYPS 300

Query: 301 LLQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMSGVIYAIISDQGDLRFRDVAGK 360
           LLQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHM+GVIYAI SDQG+LRFRD+AGK
Sbjct: 301 LLQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVIYAITSDQGNLRFRDLAGK 360

Query: 361 RAGE-SSNGFVSSLLQSLVRDTIIGVVFWVLYEQLKQQHLVP 394
           +AGE +SNGFVSSLL+ LVRDTIIGV+ WVLYEQLKQ H++P
Sbjct: 361 KAGEGNSNGFVSSLLKDLVRDTIIGVIVWVLYEQLKQLHIIP 402

[Close]

BLAST of CmoCh18G012400 vs. NCBI nr
Match: gi|659077362|ref|XP_008439166.1| (PREDICTED: traB domain-containing protein isoform X1 [Cucumis melo])

HSP 1 Score: 636.7 bits (1641), Expect = 2.6e-179
Identity = 328/380 (86.32%), Postives = 350/380 (92.11%), Query Frame = 1


Query: 15  MESLKSTPIPIFRPYPFSIATKSVKPIKVSIRPPPSDFDFRVEISRDSRAAIAEAHPELL 74
           ME LK   IPIFR YP S ATK +KPI VSI+PPPSDFDFR EIS DSRAAIAE HPELL
Sbjct: 1   MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISEDSRAAIAETHPELL 60

Query: 75  DLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNV 134
           DL DDG LVLV+K +FGPVPAWRAEFVEP+AIWLV TSHIS KSVKDVERVVRAVKPDNV
Sbjct: 61  DLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHISSKSVKDVERVVRAVKPDNV 120

Query: 135 VVELCRSRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAA 194
           VVELCRSRAGIMYTL+TGEP QKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLA 
Sbjct: 121 VVELCRSRAGIMYTLDTGEPDQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAV 180

Query: 195 FSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWNQKLSLVSS 254
           FSSKISSDVNRPFG EFRAARKASEEVGAQIVLGDRPIEITLERAWNALTW +KLSLVSS
Sbjct: 181 FSSKISSDVNRPFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWTEKLSLVSS 240

Query: 255 VIRGITSQSNVSRSNDEEAGRDGSSLQLYEQLSFSYPSLLQPLIHERDTYLAWSLKRSKA 314
           VIRGITS S+ S++ DEE+  +GSSLQLYE+LSFSYPSLLQPLIHERDTYLAWSLKRSKA
Sbjct: 241 VIRGITSGSDFSQNIDEESDGNGSSLQLYEKLSFSYPSLLQPLIHERDTYLAWSLKRSKA 300

Query: 315 VNKSKRVVGVIGRGHMSGVIYAIISDQGDLRFRDVAGKRAGE-SSNGFVSSLLQSLVRDT 374
           VNKSKRVVGVIGRGHM+GVIYAI SDQG+LRFRD+AGK+AGE +SNGFVSSLL+SLVRDT
Sbjct: 301 VNKSKRVVGVIGRGHMNGVIYAITSDQGNLRFRDLAGKKAGEGNSNGFVSSLLKSLVRDT 360

Query: 375 IIGVVFWVLYEQLKQQHLVP 394
           IIGV+ WVLYEQLKQ H++P
Sbjct: 361 IIGVILWVLYEQLKQLHIIP 380

[Close]

BLAST of CmoCh18G012400 vs. NCBI nr
Match: gi|568874439|ref|XP_006490323.1| (PREDICTED: traB domain-containing protein isoform X1 [Citrus sinensis])

HSP 1 Score: 542.0 bits (1395), Expect = 8.8e-151
Identity = 272/374 (72.73%), Postives = 321/374 (85.83%), Query Frame = 1


Query: 15  MESLKSTPIPIFRPYPFSIATKSVKPIKVSIRPPPSDFDFRVEISRDSRAAIAEAHPELL 74
           ME+ +    PIF   P  ++TK +KP KVSI+PPP DFDFR EI  DS+A IA+A PELL
Sbjct: 1   MEAFQKATFPIFSANPNLLSTKPIKPFKVSIKPPPQDFDFRTEILSDSQATIAKACPELL 60

Query: 75  DLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNV 134
           +L DDGTLVL++KR+FGPVPAWR+EFVEPE IWL+ T+H+S  S  DVERVVRA+KPDNV
Sbjct: 61  NLADDGTLVLIQKRQFGPVPAWRSEFVEPENIWLIGTTHLSQDSAADVERVVRAIKPDNV 120

Query: 135 VVELCRSRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAA 194
           VVELCRSRAGIMYT   GE  Q+L+SNMFSLSG GF GAVGRSI+LGGQTALALRLLLA 
Sbjct: 121 VVELCRSRAGIMYTSNGGENDQQLRSNMFSLSGTGFFGAVGRSIDLGGQTALALRLLLAL 180

Query: 195 FSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWNQKLSLVSS 254
           FSSKISSDVNRPFG EFRAARK +EEVGAQIVLGDRPIEITLERAWN+L WN+KL+L+ +
Sbjct: 181 FSSKISSDVNRPFGDEFRAARKVAEEVGAQIVLGDRPIEITLERAWNSLKWNEKLNLLIN 240

Query: 255 VIRGITSQSNVSRSNDEEAGRDGSSLQLYEQLSFSYPSLLQPLIHERDTYLAWSLKRSKA 314
           VIRGITS S++S  N +E   D S+ QLY++LSFS PSLL PLIHERDTYLAWSLKRSKA
Sbjct: 241 VIRGITSPSDMSLDNLKEPSPDDSTFQLYKKLSFSCPSLLLPLIHERDTYLAWSLKRSKA 300

Query: 315 VNKSKRVVGVIGRGHMSGVIYAIISDQGDLRFRDVAGKR-AGESSNGFVSSLLQSLVRDT 374
           VN SK+VVGVIG+GHM+GVIYA++SDQG+LRFRD+AGKR +G+ SNG+++SLL+SLVRDT
Sbjct: 301 VNNSKKVVGVIGKGHMNGVIYALVSDQGNLRFRDLAGKRPSGDGSNGWIASLLKSLVRDT 360

Query: 375 IIGVVFWVLYEQLK 388
           +IG++ W LYEQ+K
Sbjct: 361 VIGILLWALYEQVK 374

[Close]

BLAST of CmoCh18G012400 vs. NCBI nr
Match: gi|567858330|ref|XP_006421848.1| (hypothetical protein CICLE_v10005112mg [Citrus clementina])

HSP 1 Score: 541.6 bits (1394), Expect = 1.2e-150
Identity = 273/379 (72.03%), Postives = 323/379 (85.22%), Query Frame = 1


Query: 10  LSSSSMESLKSTPIPIFRPYPFSIATKSVKPIKVSIRPPPSDFDFRVEISRDSRAAIAEA 69
           L  +SME+ +    PIF   P  ++TK +KP KVSI+PPP DFDFR EI  DS+A IA+A
Sbjct: 16  LRLTSMEAFQKATFPIFSANPNLLSTKPIKPFKVSIKPPPQDFDFRTEILSDSQATIAKA 75

Query: 70  HPELLDLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAV 129
            PELL+L DDGTLVL++KR+FGPVPAWR+EFVEPE IWL+ T+H+S  S  DVERVVRA+
Sbjct: 76  CPELLNLADDGTLVLIQKRQFGPVPAWRSEFVEPENIWLIGTTHLSQDSAADVERVVRAI 135

Query: 130 KPDNVVVELCRSRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALR 189
           KPDNVVVELCRSRAGIMYT   GE  Q+L+SNMFSLSG GF GAVGRSI+LGGQTALALR
Sbjct: 136 KPDNVVVELCRSRAGIMYTSNGGENDQQLRSNMFSLSGTGFFGAVGRSIDLGGQTALALR 195

Query: 190 LLLAAFSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWNQKL 249
           LLLA FSSKISSDVNRPFG EFRAARK +EEVGAQIVLGDRPIEITLERAWN+L WN+KL
Sbjct: 196 LLLALFSSKISSDVNRPFGDEFRAARKVAEEVGAQIVLGDRPIEITLERAWNSLKWNEKL 255

Query: 250 SLVSSVIRGITSQSNVSRSNDEEAGRDGSSLQLYEQLSFSYPSLLQPLIHERDTYLAWSL 309
           +L+ +VIRGIT  S++S  N +E   D S+ QLY++LSFS PSLL PLIHERDTYLAWSL
Sbjct: 256 NLLINVIRGITLPSDMSLDNLKEPSPDDSTFQLYKKLSFSCPSLLLPLIHERDTYLAWSL 315

Query: 310 KRSKAVNKSKRVVGVIGRGHMSGVIYAIISDQGDLRFRDVAGKR-AGESSNGFVSSLLQS 369
           KRSKAVN SK+VVGVIG+GHM+GVIYA++SDQG+LRFRD+AGKR +G+ SNG+++SLL+S
Sbjct: 316 KRSKAVNNSKKVVGVIGKGHMNGVIYALVSDQGNLRFRDLAGKRSSGDGSNGWIASLLKS 375

Query: 370 LVRDTIIGVVFWVLYEQLK 388
           LVRDT+IG++ W LYEQ+K
Sbjct: 376 LVRDTVIGILLWALYEQVK 394

[Close]

BLAST of CmoCh18G012400 vs. NCBI nr
Match: gi|743856905|ref|XP_011030034.1| (PREDICTED: traB domain-containing protein isoform X1 [Populus euphratica])

HSP 1 Score: 541.2 bits (1393), Expect = 1.5e-150
Identity = 270/375 (72.00%), Postives = 318/375 (84.80%), Query Frame = 1


Query: 15  MESLKSTPIPIFRPYPFSIATKSVKPIKVSIRPPPSDFDFRVEISRDSRAAIAEAHPELL 74
           ME+L   P PIF   P  + TK  KP+KVSI+PPP DFDFR EI ++SRA I+  +PELL
Sbjct: 1   METLLKIPFPIFSNNPHILTTKPTKPLKVSIKPPPPDFDFRSEILQESRATISRTYPELL 60

Query: 75  DLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNV 134
           DL +DGTL+L+EK+ FGPVP+WR EFVEPEAIWLV T+HIS +S  +VERVVRAVKPDN+
Sbjct: 61  DLANDGTLLLIEKKLFGPVPSWRTEFVEPEAIWLVGTTHISSQSAAEVERVVRAVKPDNI 120

Query: 135 VVELCRSRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAA 194
           VVELCRSRAGIMY  + G   Q+L+S+MFSLSG GF GAVGRSINLGGQTALALRLLLA 
Sbjct: 121 VVELCRSRAGIMYISDEGADGQQLRSSMFSLSGTGFFGAVGRSINLGGQTALALRLLLAL 180

Query: 195 FSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWNQKLSLVSS 254
           FSSKISSDVNRPFG EFRAARK +EE+GAQIVLGDRPIEITLERAWN+L W +KLSLV +
Sbjct: 181 FSSKISSDVNRPFGDEFRAARKVAEEIGAQIVLGDRPIEITLERAWNSLKWREKLSLVIA 240

Query: 255 VIRGITSQSNVSRSNDEEAGRDGSSLQLYEQLSFSYPSLLQPLIHERDTYLAWSLKRSKA 314
           V+RGITS S++S++N + +  D  + QLYEQLSFSYPSLLQPLIHERDTYLAWSLKRSKA
Sbjct: 241 VVRGITSSSDISKNNFKASSTDDRTFQLYEQLSFSYPSLLQPLIHERDTYLAWSLKRSKA 300

Query: 315 VNKSKRVVGVIGRGHMSGVIYAIISDQGDLRFRDVAGKRAG--ESSNGFVSSLLQSLVRD 374
           VN  KRVVGVIG+GHM+GVIYA+ISDQG+LRFRD+AG+R+   + SNGFV+ L++SLVRD
Sbjct: 301 VNNGKRVVGVIGKGHMNGVIYALISDQGNLRFRDLAGRRSSGDDGSNGFVAGLVKSLVRD 360

Query: 375 TIIGVVFWVLYEQLK 388
           T IG++ W LYEQ+K
Sbjct: 361 TAIGILLWQLYEQIK 375

The following BLAST results are available for this feature:

BLAST of CmoCh18G012400 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TRABD_BOVIN	6.8e-18	28.71	TraB domain-containing protein OS=Bos taurus GN=TRABD PE=2 SV=1	[more]
TRABD_HUMAN	1.2e-17	28.37	TraB domain-containing protein OS=Homo sapiens GN=TRABD PE=1 SV=1	[more]
TRABD_MOUSE	2.6e-17	28.17	TraB domain-containing protein OS=Mus musculus GN=Trabd PE=1 SV=1	[more]
Y1365_METJA	8.6e-13	23.55	Uncharacterized protein MJ1365 OS=Methanocaldococcus jannaschii (strain ATCC 430...	[more]

BLAST of CmoCh18G012400 vs. TrEMBL


Match Name	E-value	Identity	Description
V4RLJ8_9ROSI	8.0e-151	72.03	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005112mg PE=4 SV=1	[more]
B9I4F6_POPTR	1.4e-150	72.53	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s13890g PE=4 SV=2	[more]
A0A067FA70_CITSI	3.1e-150	72.46	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017036mg PE=4 SV=1	[more]
B9R9G9_RICCO	1.1e-147	70.80	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1497430 PE=4 SV=1	[more]
A0A0D2Q3D2_GOSRA	6.0e-146	70.93	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G046300 PE=4 SV=1	[more]

BLAST of CmoCh18G012400 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G52030.2	1.5e-132	64.42	TraB family protein	[more]
AT2G32340.1	2.4e-21	30.21	TraB family protein	[more]
AT1G05270.1	7.0e-21	29.13	TraB family protein	[more]

BLAST of CmoCh18G012400 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449446067\|ref\|XP_004140793.1\|	2.8e-181	83.58	PREDICTED: traB domain-containing protein isoform X1 [Cucumis sativus]	[more]
gi\|659077362\|ref\|XP_008439166.1\|	2.6e-179	86.32	PREDICTED: traB domain-containing protein isoform X1 [Cucumis melo]	[more]
gi\|568874439\|ref\|XP_006490323.1\|	8.8e-151	72.73	PREDICTED: traB domain-containing protein isoform X1 [Citrus sinensis]	[more]
gi\|567858330\|ref\|XP_006421848.1\|	1.2e-150	72.03	hypothetical protein CICLE_v10005112mg [Citrus clementina]	[more]
gi\|743856905\|ref\|XP_011030034.1\|	1.5e-150	72.00	PREDICTED: traB domain-containing protein isoform X1 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002816	Pheromone_shutdown_TraB

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G012400.1	CmoCh18G012400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002816	Pheromone shutdown, TraB	PFAM	PF01963	TraB	coord: 96..332 score: 1.8
None	No IPR available	PANTHER	PTHR21530	PHEROMONE SHUTDOWN PROTEIN	coord: 4..387 score: 9.1E
None	No IPR available	PANTHER	PTHR21530:SF1	TRAB FAMILY PROTEIN	coord: 4..387 score: 9.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh18G012400	Cucsa.251010	Cucumber (Gy14) v1	cgycmoB0709
CmoCh18G012400	CmaCh18G012190	Cucurbita maxima (Rimu)	cmacmoB406
CmoCh18G012400	Cla006210	Watermelon (97103) v1	cmowmB366
CmoCh18G012400	Csa3G180270	Cucumber (Chinese Long) v2	cmocuB398
CmoCh18G012400	MELO3C006871	Melon (DHL92) v3.5.1	cmomeB368
CmoCh18G012400	ClCG05G007790	Watermelon (Charleston Gray)	cmowcgB359
CmoCh18G012400	CSPI03G16570	Wild cucumber (PI 183967)	cmocpiB401
CmoCh18G012400	Lsi05G012640	Bottle gourd (USVL1VR-Ls)	cmolsiB372
CmoCh18G012400	Cp4.1LG09g01180	Cucurbita pepo (Zucchini)	cmocpeB376
CmoCh18G012400	MELO3C006872.2	Melon (DHL92) v3.6.1	cmomedB421
CmoCh18G012400	CsaV3_3G016780	Cucumber (Chinese Long) v3	cmocucB0476
CmoCh18G012400	Cla97C05G089750	Watermelon (97103) v2	cmowmbB404
CmoCh18G012400	Bhi01G000998	Wax gourd	cmowgoB0506
CmoCh18G012400	CsGy3G016690	Cucumber (Gy14) v2	cgybcmoB324
CmoCh18G012400	Carg26815	Silver-seed gourd	carcmoB0011

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh18G012400	Watermelon (97103) v2	cmowmbB387
CmoCh18G012400	Wax gourd	cmowgoB0500
CmoCh18G012400	Cucurbita moschata (Rifu)	cmocmoB242
CmoCh18G012400	Cucurbita moschata (Rifu)	cmocmoB275
CmoCh18G012400	Cucurbita moschata (Rifu)	cmocmoB333
CmoCh18G012400	Cucurbita maxima (Rimu)	cmacmoB327
CmoCh18G012400	Cucurbita maxima (Rimu)	cmacmoB591
CmoCh18G012400	Wild cucumber (PI 183967)	cmocpiB416
CmoCh18G012400	Cucumber (Chinese Long) v2	cmocuB411
CmoCh18G012400	Melon (DHL92) v3.5.1	cmomeB343
CmoCh18G012400	Watermelon (Charleston Gray)	cmowcgB348
CmoCh18G012400	Cucurbita pepo (Zucchini)	cmocpeB386
CmoCh18G012400	Cucurbita pepo (Zucchini)	cmocpeB414
CmoCh18G012400	Bottle gourd (USVL1VR-Ls)	cmolsiB353
CmoCh18G012400	Cucumber (Gy14) v2	cgybcmoB606
CmoCh18G012400	Melon (DHL92) v3.6.1	cmomedB392
CmoCh18G012400	Silver-seed gourd	carcmoB0968
CmoCh18G012400	Silver-seed gourd	carcmoB1176
CmoCh18G012400	Silver-seed gourd	carcmoB1234
CmoCh18G012400	Silver-seed gourd	carcmoB1253
CmoCh18G012400	Cucumber (Chinese Long) v3	cmocucB0491