CmaCh18G012190 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGTTAAAGCTCCCTTCTTTTTCTTATCTTCTTCATCCATGGAGGCTCTCAAATCCACGGCTATTCCCATTTTCAGGCCCTACCCAGTTTCAATCCCGACTAAATCTATCAAACCCACCAAGGTTTCCATTAGGCCGCCTCCATCGGACTTCGATTTCCGAGTTGAACTTTCTCGGGATTCCAGAGCCGCCATTGCTGAAGCTCACCCCGAGTTGCTTGATTTGGTTGACGATGGCACGTTGGTTTTGGTCGAGAAGAGGAGATTCGGCCCTGTCCCTGCTTGGAGAGCCGAATTTGTGGAGCCGGAAGCGATATGGTTGGTCGCAACTTCGCATATTTCGCCCAAATCGGTTAAGGATGTCGAGCGAGTGGTTCGAGCAGTGAAGCCCGATAATGTGGTCGTCGAACTTTGCCGGAGCAGGCAAGTTTGA ATGGCCGTTAAAGCTCCCTTCTTTTTCTTATCTTCTTCATCCATGGAGGCTCTCAAATCCACGGCTATTCCCATTTTCAGGCCCTACCCAGTTTCAATCCCGACTAAATCTATCAAACCCACCAAGGTTTCCATTAGGCCGCCTCCATCGGACTTCGATTTCCGAGTTGAACTTTCTCGGGATTCCAGAGCCGCCATTGCTGAAGCTCACCCCGAGTTGCTTGATTTGGTTGACGATGGCACGTTGGTTTTGGTCGAGAAGAGGAGATTCGGCCCTGTCCCTGCTTGGAGAGCCGAATTTGTGGAGCCGGAAGCGATATGGTTGGTCGCAACTTCGCATATTTCGCCCAAATCGGTTAAGGATGTCGAGCGAGTGGTTCGAGCAGTGAAGCCCGATAATGTGGTCGTCGAACTTTGCCGGAGCAGGCAAGTTTGA ATGGCCGTTAAAGCTCCCTTCTTTTTCTTATCTTCTTCATCCATGGAGGCTCTCAAATCCACGGCTATTCCCATTTTCAGGCCCTACCCAGTTTCAATCCCGACTAAATCTATCAAACCCACCAAGGTTTCCATTAGGCCGCCTCCATCGGACTTCGATTTCCGAGTTGAACTTTCTCGGGATTCCAGAGCCGCCATTGCTGAAGCTCACCCCGAGTTGCTTGATTTGGTTGACGATGGCACGTTGGTTTTGGTCGAGAAGAGGAGATTCGGCCCTGTCCCTGCTTGGAGAGCCGAATTTGTGGAGCCGGAAGCGATATGGTTGGTCGCAACTTCGCATATTTCGCCCAAATCGGTTAAGGATGTCGAGCGAGTGGTTCGAGCAGTGAAGCCCGATAATGTGGTCGTCGAACTTTGCCGGAGCAGGCAAGTTTGA MAVKAPFFFLSSSSMEALKSTAIPIFRPYPVSIPTKSIKPTKVSIRPPPSDFDFRVELSRDSRAAIAEAHPELLDLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNVVVELCRSRQV
BLAST of CmaCh18G012190 vs. TrEMBL
Match: A0A0A0L8K8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G180270 PE=4 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 1.8e-55 Identity = 110/130 (84.62%), Postives = 118/130 (90.77%), Query Frame = 1
BLAST of CmaCh18G012190 vs. TrEMBL
Match: V4RLJ8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005112mg PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 5.9e-43 Identity = 89/133 (66.92%), Postives = 105/133 (78.95%), Query Frame = 1
BLAST of CmaCh18G012190 vs. TrEMBL
Match: A0A067EYC3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017036mg PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 2.9e-42 Identity = 87/128 (67.97%), Postives = 102/128 (79.69%), Query Frame = 1
BLAST of CmaCh18G012190 vs. TrEMBL
Match: A0A067FA70_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017036mg PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 2.9e-42 Identity = 87/128 (67.97%), Postives = 102/128 (79.69%), Query Frame = 1
BLAST of CmaCh18G012190 vs. TrEMBL
Match: B9R9G9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1497430 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 6.5e-42 Identity = 88/130 (67.69%), Postives = 101/130 (77.69%), Query Frame = 1
BLAST of CmaCh18G012190 vs. TAIR10
Match: AT5G52030.2 (AT5G52030.2 TraB family protein) HSP 1 Score: 160.6 bits (405), Expect = 7.1e-40 Identity = 80/124 (64.52%), Postives = 96/124 (77.42%), Query Frame = 1
BLAST of CmaCh18G012190 vs. NCBI nr
Match: gi|449446067|ref|XP_004140793.1| (PREDICTED: traB domain-containing protein isoform X1 [Cucumis sativus]) HSP 1 Score: 228.8 bits (582), Expect = 6.1e-57 Identity = 119/150 (79.33%), Postives = 127/150 (84.67%), Query Frame = 1
BLAST of CmaCh18G012190 vs. NCBI nr
Match: gi|700202206|gb|KGN57339.1| (hypothetical protein Csa_3G180270 [Cucumis sativus]) HSP 1 Score: 223.4 bits (568), Expect = 2.5e-55 Identity = 110/130 (84.62%), Postives = 118/130 (90.77%), Query Frame = 1
BLAST of CmaCh18G012190 vs. NCBI nr
Match: gi|659077362|ref|XP_008439166.1| (PREDICTED: traB domain-containing protein isoform X1 [Cucumis melo]) HSP 1 Score: 209.5 bits (532), Expect = 3.8e-51 Identity = 104/128 (81.25%), Postives = 111/128 (86.72%), Query Frame = 1
BLAST of CmaCh18G012190 vs. NCBI nr
Match: gi|657944903|ref|XP_008377060.1| (PREDICTED: traB domain-containing protein isoform X1 [Malus domestica]) HSP 1 Score: 185.7 bits (470), Expect = 5.9e-44 Identity = 90/128 (70.31%), Postives = 106/128 (82.81%), Query Frame = 1
BLAST of CmaCh18G012190 vs. NCBI nr
Match: gi|694427253|ref|XP_009341262.1| (PREDICTED: traB domain-containing protein isoform X1 [Pyrus x bretschneideri]) HSP 1 Score: 182.6 bits (462), Expect = 5.0e-43 Identity = 88/128 (68.75%), Postives = 106/128 (82.81%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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