Carg26815 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26815
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	TraB family protein
Location	Cucurbita_argyrosperma_scaffold_340 : 94769 .. 98256 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTCTCTCAAATCCACGCCTATTCCCATTTTCAGGCCCTACCCATTTTCAATCGCGACCAAATCTGTGAAACCCATCAAGGTTTCCATTAGGCCGCCTCCATCGGACTTCGATTTCCGAGTTGAAATCTCTCGGGATTCCAGAGCCGCCATTGCTGAAGCTCACCCTGAGTTGCTTGATTTGGTTGACGATGGCACGTTGGTTTTGGTCGAGAAGAGGAGATTCGGCCCTGTCCCTGCTTGGAGAGCCGAATTTGTGGAGCCGGAAGCGATATGGTTGGTCGCAACTTCGCATATTTCGCCCAAATCGGTTAAGGATGTCGAGCGAGTGGTTCGAGCAGTGAAGCCCGATAATGTGGTCGTCGAGCTTTGCCGGAGCAGGCAAGTTTGATTTCCAATTTGGGGTTTTTTTTTTTGTCAGTAATTCAATATCCAAATCAAGCAAAGTAGTCTACATTGTTCTGAATTCATTCTTGTTCTGTATTTGCTTTCATTTACCAATTAAAAAGAATCAACATATCTGATGTGTTGAATTATTGCTTTGCTTTAAAAGAATGAACATCTTAAAACGATTCCAGACATTTGTTCCAGAGCTGGAATCATGTATACATTAGAAACTGGTGAGCCACACCAAAAACTAAAGTCCAACATGTTCTCCTTGAGTGGAGATGGTTTCTTGGGTGCTGTTGGTCGCAGCATAAACCTAGGTGAGGCTAACATTTTGTTTGTTTTTTTTGTTGGTTGTTGGCATATAAGCTGTCTAAAACTTGTCAATAATTCTTCAGGAGGCCAAACAGCTCTCGCTTTGCGCCTGCTTTTAGCTGCTTTTTCCTCCAAAATTTCTTCAGATGTCAACCGTCCTTTTGGCAGTGAGGTAACAGATCTTCAATTCACCAAGTAATGTTTAGACTAAGTTCATGAAACTCTCATCAATCATGCAGTTTCGGGCTGCTCGTAAAGCTTCTGAAGAAGTTGGTGCTCAAATAGTTCTAGGGGATCGACCAATTGAAATAACTGTATGTGCTTTTTTCCTGCAAGATTACACAATTTCTTGCTTTTCCTTTCCCTCTCAGTCACTTCAATTTGATTTGTTACACAATTTCTTGCTTTTCCTTTCCCTCTCAGTCACTTCAATTTGATTTGTTGATTGTGCAGCTAGAAAGGGCATGGAACGCTTTGACATGGAACCAGAAGTTGAGCTTAGTAAGCTCAGTTATCCGTGGAATAACTTCACAATCTAATGTTTCTCGGAGCAATGATGAGGTTCTTTCCCACCTGAAATCTTGTGAATTGTTTCTCAAAAAATTTAACTCGGCTTTAAACACGTCAATCATAAAGTATCTTGTTGATGATTGTTGGGAGGGAGTCCCACGTTGGCTAATTAGGGGTATGATCATGAGTTTCTAAGTAAACAACACTATCTCCACTAGATTGAGGCCTTTTGGGAACATGGATATAAAGCCATGAGAGCTTATACTCAAAGTTGACAATATCATACCACGGTAGAGAGCCGTGGTTCCAAACCTATCTCAGAAGTGATTCAGCCTTGGTTGCAAGATGTGAAGAAAATTTGTGTCCATAGCCATGCTTCCTAAGTTTTGAATAATAGGCCGGTTGAGATAGGAACTGGAGTCGGATGCAAAAGAAATGCATAGACTGGCTTACATACCATATCAGGAACATCCGACATAGATTTAAACATGTCTTTCTCAGGAGTTGAATCTAAGCTTTAAACATAGAGATCTGTATAATTAGACAATTCCTGTTACTATTTTCTTTTTTCTCATTTGCGATGATACATCGCTTCTTTTACTTAGGATCTTGTTTATTAATGTGAGATCTCACATCGATTGGAGAGAGGAACGAGTGTCAGCGAAGACGCTGGGACTCGAAGGGGGTGGATTGTGAGATCCCACATCGAATGGAGAGAGAAGTGAGTGTCAGCGAGGACGCTGGGTCCCGAAGGGGGTGGATCGTGAGATCCCACATCAGTTGGAGAGGGGAACGAAGCATTCTTTACAAGGGTGTTGAAACCTCTCCCCTCCCTAGCAAACGCGTTTTAAAAGCCTTGAGGAGAAACCCGAAAGGGAAAACCCAAAGATGACGATATCTGCTAGTTGTGTGCTTGAGCTGTTACAAATAGTATCAGAGCCAGACATTGGGCGATGTGCCAACGAGGACGCTGGTTCTCGAAGAGGGGTGAATTGTGAGATCCCACGTCGATTGGAGAGAGGAATGAAACATTCTTTATAAGAGTGTTGAAACTTCTCTCTAGAAACGCGTTTTAGAAACCTTGAGGGGAAACCCGAAAGGGAAAGTCCAAAGAAGACAATATTTGCTAGTGGTAAGCTTGGGTTGTTACAAATGGAATCAGAGCCGGACACCGAGCGGTGTGCCAACAAGGACGTTGAGCCTCGAAAGGGGGTGGACGCGGCGGTGTGCCAGTGAGGACGTTGGGCCTTGAAGGGGTTTGGATTATGAGATCCCACCTCGATTGGAGAGAGGAATGAAACATTGTTTATAAGAATGTTGAAACTTCTCCCTAGCAAATCGGTTTTAGAAACCTTGAGGGGAAACCCAAAAGGGAAAGTCCAAAGAGGACAATATCTATTAGTAGTGCGCTTGGGCTGTTATAAATGGCATCAGAGCCGGACACCGGGCGGTATGCTAACGAGGACGTTAAGCTCCGAAATGGGGTGGACACGATGGTGTGCTAGCGAGGACGCTGAGCCCCAAAGGGAGGTGAATTGTGAGATCCCACATCGATTGGAGAGGGAGAACGAAGAATTGTTTATAAGGGTGTTGAAACCTCTCCCTAGCAGACTCGTGGACGAATCATCATATCCTTCTTTTTCTTGAAGTTCGAATGTCGGTGCATGAATCACCATATCCTTCGTTTTGTGAATGTGCTTTTCAGGAAGCAGGTAGAGATGGGAGTTCCTTGCAGCTGTATGAGCAGCTCAGTTTTTCATATCCATCTCTTCTTCAACCTCTTATTCATGAACGAGACACTGTAAGTATAATCACATAATGCATTTACAGCTCTTACTTCTTACCTCTGTAAAGTTGTTAATAGCTGCATTTTCAGTACCTTGCATGGTCTCTAAAGCGAAGCAAGGCGGTGAACAAGAGTAAAAGGGTGGTGGGGGTGATTGGAAGAGGCCATATGAGCGGCGTCATCTATGCGATCATATCGGATCAAGGAGACTTGCGATTTCGAGACGTTGCAGGTAAGAGAGCTGGGGAAAGCTCCAATGGCTTTGTTAGCAGTCTGTTGCAGAGCTTGGTTAGAGACACTATCATTGGTGTTGTCTTCTGGGTTTTATATGAACAATTGAAACAACAACATTTAGTGCCTTAGCTGATCATCTTTCCAAACCATACCTCTGTAGAAAATCAATCCAAAAGTATACCATTCAAAACTTACATGTAAAGAGATGATTTGATCCTTATGTGTATTAGTCCATTTTTCAATAAATCATTTGA

mRNA sequence

ATGGAGTCTCTCAAATCCACGCCTATTCCCATTTTCAGGCCCTACCCATTTTCAATCGCGACCAAATCTGTGAAACCCATCAAGGTTTCCATTAGGCCGCCTCCATCGGACTTCGATTTCCGAGTTGAAATCTCTCGGGATTCCAGAGCCGCCATTGCTGAAGCTCACCCTGAGTTGCTTGATTTGGTTGACGATGGCACGTTGGTTTTGGTCGAGAAGAGGAGATTCGGCCCTGTCCCTGCTTGGAGAGCCGAATTTGTGGAGCCGGAAGCGATATGGTTGGTCGCAACTTCGCATATTTCGCCCAAATCGGTTAAGGATGTCGAGCGAGTGGTTCGAGCAGTGAAGCCCGATAATGTGGTCGTCGAGCTTTGCCGGAGCAGGCAAAATGAACATCTTAAAACGATTCCAGACATTTGTTCCAGAGCTGGAATCATGTATACATTAGAAACTGGTGAGCCACACCAAAAACTAAAGTCCAACATGTTCTCCTTGAGTGGAGATGGTTTCTTGGGTGCTGTTGGTCGCAGCATAAACCTAGGAGGCCAAACAGCTCTCGCTTTGCGCCTGCTTTTAGCTGCTTTTTCCTCCAAAATTTCTTCAGATGTCAACCGTCCTTTTGGCAGTGAGTTTCGGGCTGCTCGTAAAGCTTCTGAAGAAGTTGGTGCTCAAATAGTTCTAGGGGATCGACCAATTGAAATAACTCTAGAAAGGGCATGGAACGCTTTGACATGGAACCAGAAGTTGAGCTTAGTAAGCTCAGTTATCCGTGGAATAACTTCACAATCTAATGTTTCTCGGAGCAATGATGAGGAAGCAGGTAGAGATGGGAGTTCCTTGCAGCTGTATGAGCAGCTCAGTTTTTCATATCCATCTCTTCTTCAACCTCTTATTCATGAACGAGACACTTACCTTGCATGGTCTCTAAAGCGAAGCAAGGCGGTGAACAAGAGTAAAAGGGTGGTGGGGGTGATTGGAAGAGGCCATATGAGCGGCGTCATCTATGCGATCATATCGGATCAAGGAGACTTGCGATTTCGAGACGTTGCAGGTAAGAGAGCTGGGGAAAGCTCCAATGGCTTTGTTAGCAGTCTGTTGCAGAGCTTGGTTAGAGACACTATCATTGGTGTTGTCTTCTGGGTTTTATATGAACAATTGAAACAACAACATTTAGTGCCTTAGCTGATCATCTTTCCAAACCATACCTCTGTAGAAAATCAATCCAAAAGTATACCATTCAAAACTTACATGTAAAGAGATGATTTGATCCTTATGTGTATTAGTCCATTTTTCAATAAATCATTTGA

Coding sequence (CDS)

ATGGAGTCTCTCAAATCCACGCCTATTCCCATTTTCAGGCCCTACCCATTTTCAATCGCGACCAAATCTGTGAAACCCATCAAGGTTTCCATTAGGCCGCCTCCATCGGACTTCGATTTCCGAGTTGAAATCTCTCGGGATTCCAGAGCCGCCATTGCTGAAGCTCACCCTGAGTTGCTTGATTTGGTTGACGATGGCACGTTGGTTTTGGTCGAGAAGAGGAGATTCGGCCCTGTCCCTGCTTGGAGAGCCGAATTTGTGGAGCCGGAAGCGATATGGTTGGTCGCAACTTCGCATATTTCGCCCAAATCGGTTAAGGATGTCGAGCGAGTGGTTCGAGCAGTGAAGCCCGATAATGTGGTCGTCGAGCTTTGCCGGAGCAGGCAAAATGAACATCTTAAAACGATTCCAGACATTTGTTCCAGAGCTGGAATCATGTATACATTAGAAACTGGTGAGCCACACCAAAAACTAAAGTCCAACATGTTCTCCTTGAGTGGAGATGGTTTCTTGGGTGCTGTTGGTCGCAGCATAAACCTAGGAGGCCAAACAGCTCTCGCTTTGCGCCTGCTTTTAGCTGCTTTTTCCTCCAAAATTTCTTCAGATGTCAACCGTCCTTTTGGCAGTGAGTTTCGGGCTGCTCGTAAAGCTTCTGAAGAAGTTGGTGCTCAAATAGTTCTAGGGGATCGACCAATTGAAATAACTCTAGAAAGGGCATGGAACGCTTTGACATGGAACCAGAAGTTGAGCTTAGTAAGCTCAGTTATCCGTGGAATAACTTCACAATCTAATGTTTCTCGGAGCAATGATGAGGAAGCAGGTAGAGATGGGAGTTCCTTGCAGCTGTATGAGCAGCTCAGTTTTTCATATCCATCTCTTCTTCAACCTCTTATTCATGAACGAGACACTTACCTTGCATGGTCTCTAAAGCGAAGCAAGGCGGTGAACAAGAGTAAAAGGGTGGTGGGGGTGATTGGAAGAGGCCATATGAGCGGCGTCATCTATGCGATCATATCGGATCAAGGAGACTTGCGATTTCGAGACGTTGCAGGTAAGAGAGCTGGGGAAAGCTCCAATGGCTTTGTTAGCAGTCTGTTGCAGAGCTTGGTTAGAGACACTATCATTGGTGTTGTCTTCTGGGTTTTATATGAACAATTGAAACAACAACATTTAGTGCCTTAG

Protein sequence

MESLKSTPIPIFRPYPFSIATKSVKPIKVSIRPPPSDFDFRVEISRDSRAAIAEAHPELLDLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNVVVELCRSRQNEHLKTIPDICSRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAAFSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWNQKLSLVSSVIRGITSQSNVSRSNDEEAGRDGSSLQLYEQLSFSYPSLLQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRGHMSGVIYAIISDQGDLRFRDVAGKRAGESSNGFVSSLLQSLVRDTIIGVVFWVLYEQLKQQHLVP

Homology

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BLAST of Carg26815 vs. NCBI nr
Match: XP_022945049.1 (traB domain-containing protein isoform X1 [Cucurbita moschata])

HSP 1 Score: 725.7 bits (1872), Expect = 8.4e-206
Identity = 379/393 (96.44%), Postives = 379/393 (96.44%), Query Frame = 0


Query: 1   MESLKSTPIPIFRPYPFSIATKSVKPIKVSIRPPPSDFDFRVEISRDSRAAIAEAHPELL 60
           MESLKSTPIPIFRPYPFSIATKSVKPIKVSIRPPPSDFDFRVEISRDSRAAIAEAHPELL
Sbjct: 51  MESLKSTPIPIFRPYPFSIATKSVKPIKVSIRPPPSDFDFRVEISRDSRAAIAEAHPELL 110

Query: 61  DLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNV 120
           DLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNV
Sbjct: 111 DLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNV 170

Query: 121 VVELCRSRQNEHLKTIPDICSRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINL 180
           VVELCR              SRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINL
Sbjct: 171 VVELCR--------------SRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINL 230

Query: 181 GGQTALALRLLLAAFSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAW 240
           GGQTALALRLLLAAFSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAW
Sbjct: 231 GGQTALALRLLLAAFSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAW 290

Query: 241 NALTWNQKLSLVSSVIRGITSQSNVSRSNDEEAGRDGSSLQLYEQLSFSYPSLLQPLIHE 300
           NALTWNQKLSLVSSVIRGITSQSNVSRSNDEEAGRDGSSLQLYEQLSFSYPSLLQPLIHE
Sbjct: 291 NALTWNQKLSLVSSVIRGITSQSNVSRSNDEEAGRDGSSLQLYEQLSFSYPSLLQPLIHE 350

Query: 301 RDTYLAWSLKRSKAVNKSKRVVGVIGRGHMSGVIYAIISDQGDLRFRDVAGKRAGESSNG 360
           RDTYLAWSLKRSKAVNKSKRVVGVIGRGHMSGVIYAIISDQGDLRFRDVAGKRAGESSNG
Sbjct: 351 RDTYLAWSLKRSKAVNKSKRVVGVIGRGHMSGVIYAIISDQGDLRFRDVAGKRAGESSNG 410

Query: 361 FVSSLLQSLVRDTIIGVVFWVLYEQLKQQHLVP 394
           FVSSLLQSLVRDTIIGVVFWVLYEQLKQQHLVP
Sbjct: 411 FVSSLLQSLVRDTIIGVVFWVLYEQLKQQHLVP 429

[Close]

BLAST of Carg26815 vs. NCBI nr
Match: XP_023542003.1 (traB domain-containing protein isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 709.1 bits (1829), Expect = 8.1e-201
Identity = 370/393 (94.15%), Postives = 375/393 (95.42%), Query Frame = 0


Query: 1   MESLKSTPIPIFRPYPFSIATKSVKPIKVSIRPPPSDFDFRVEISRDSRAAIAEAHPELL 60
           ME+LKST IPIFRPYPFSIATKS+KPIKVSIRPPPSDFDFRVEISRDSRAAIAEAHPELL
Sbjct: 15  MEALKSTAIPIFRPYPFSIATKSMKPIKVSIRPPPSDFDFRVEISRDSRAAIAEAHPELL 74

Query: 61  DLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNV 120
           DLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNV
Sbjct: 75  DLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNV 134

Query: 121 VVELCRSRQNEHLKTIPDICSRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINL 180
           VVELCR              SRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINL
Sbjct: 135 VVELCR--------------SRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINL 194

Query: 181 GGQTALALRLLLAAFSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAW 240
           GGQTALALRLLLA FSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAW
Sbjct: 195 GGQTALALRLLLAVFSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAW 254

Query: 241 NALTWNQKLSLVSSVIRGITSQSNVSRSNDEEAGRDGSSLQLYEQLSFSYPSLLQPLIHE 300
           NALTWNQKLSLVSSVIRGITSQSNVS+SNDEEAGRDGSSLQLYEQLS SYPSLLQPLIHE
Sbjct: 255 NALTWNQKLSLVSSVIRGITSQSNVSQSNDEEAGRDGSSLQLYEQLSCSYPSLLQPLIHE 314

Query: 301 RDTYLAWSLKRSKAVNKSKRVVGVIGRGHMSGVIYAIISDQGDLRFRDVAGKRAGESSNG 360
           RDTYLAWSLKRSKAVNKSKRVVGVIGRGHM+GVIYAIISDQGDLRFRDVAGKRAGE+SNG
Sbjct: 315 RDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVIYAIISDQGDLRFRDVAGKRAGETSNG 374

Query: 361 FVSSLLQSLVRDTIIGVVFWVLYEQLKQQHLVP 394
           FVSSLLQSLVRDTIIGVVFWVLYEQLKQ HLVP
Sbjct: 375 FVSSLLQSLVRDTIIGVVFWVLYEQLKQLHLVP 393

[Close]

BLAST of Carg26815 vs. NCBI nr
Match: XP_022968022.1 (traB domain-containing protein isoform X1 [Cucurbita maxima])

HSP 1 Score: 702.2 bits (1811), Expect = 9.9e-199
Identity = 364/393 (92.62%), Postives = 374/393 (95.17%), Query Frame = 0


Query: 1   MESLKSTPIPIFRPYPFSIATKSVKPIKVSIRPPPSDFDFRVEISRDSRAAIAEAHPELL 60
           ME+LKST IPIFRPYP SI TKS+KP KVSIRPPPSDFDFRVE+SRDSRAAIAEAHPELL
Sbjct: 15  MEALKSTAIPIFRPYPVSIPTKSIKPTKVSIRPPPSDFDFRVELSRDSRAAIAEAHPELL 74

Query: 61  DLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNV 120
           DLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNV
Sbjct: 75  DLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNV 134

Query: 121 VVELCRSRQNEHLKTIPDICSRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINL 180
           VVELCR              SRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINL
Sbjct: 135 VVELCR--------------SRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINL 194

Query: 181 GGQTALALRLLLAAFSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAW 240
           GGQTALALRLLLAAFSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAW
Sbjct: 195 GGQTALALRLLLAAFSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAW 254

Query: 241 NALTWNQKLSLVSSVIRGITSQSNVSRSNDEEAGRDGSSLQLYEQLSFSYPSLLQPLIHE 300
           NALTWN+KLSLVSSVIRGITSQSNVS+SNDEEAGRDGSSLQLYEQLSFSYPSLLQPLIHE
Sbjct: 255 NALTWNEKLSLVSSVIRGITSQSNVSQSNDEEAGRDGSSLQLYEQLSFSYPSLLQPLIHE 314

Query: 301 RDTYLAWSLKRSKAVNKSKRVVGVIGRGHMSGVIYAIISDQGDLRFRDVAGKRAGESSNG 360
           RDTY+AWSLKRSKAVNKSKRVVGVIGRGHM+GVIYAIISDQG+LRFRDVAGKRAGE+SNG
Sbjct: 315 RDTYIAWSLKRSKAVNKSKRVVGVIGRGHMNGVIYAIISDQGNLRFRDVAGKRAGETSNG 374

Query: 361 FVSSLLQSLVRDTIIGVVFWVLYEQLKQQHLVP 394
           FVSSLLQSLVRDTIIGV+FWVLYEQLKQ HLVP
Sbjct: 375 FVSSLLQSLVRDTIIGVLFWVLYEQLKQLHLVP 393

[Close]

BLAST of Carg26815 vs. NCBI nr
Match: XP_008439166.1 (PREDICTED: traB domain-containing protein [Cucumis melo])

HSP 1 Score: 627.5 bits (1617), Expect = 3.1e-176
Identity = 328/394 (83.25%), Postives = 350/394 (88.83%), Query Frame = 0


Query: 1   MESLKSTPIPIFRPYPFSIATKSVKPIKVSIRPPPSDFDFRVEISRDSRAAIAEAHPELL 60
           ME LK   IPIFR YP S ATK +KPI VSI+PPPSDFDFR EIS DSRAAIAE HPELL
Sbjct: 1   MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISEDSRAAIAETHPELL 60

Query: 61  DLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNV 120
           DL DDG LVLV+K +FGPVPAWRAEFVEP+AIWLV TSHIS KSVKDVERVVRAVKPDNV
Sbjct: 61  DLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHISSKSVKDVERVVRAVKPDNV 120

Query: 121 VVELCRSRQNEHLKTIPDICSRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINL 180
           VVELCR              SRAGIMYTL+TGEP QKLKSNMFSLSGDGFLGAVGRSINL
Sbjct: 121 VVELCR--------------SRAGIMYTLDTGEPDQKLKSNMFSLSGDGFLGAVGRSINL 180

Query: 181 GGQTALALRLLLAAFSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAW 240
           GGQTALALRLLLA FSSKISSDVNRPFG EFRAARKASEEVGAQIVLGDRPIEITLERAW
Sbjct: 181 GGQTALALRLLLAVFSSKISSDVNRPFGDEFRAARKASEEVGAQIVLGDRPIEITLERAW 240

Query: 241 NALTWNQKLSLVSSVIRGITSQSNVSRSNDEEAGRDGSSLQLYEQLSFSYPSLLQPLIHE 300
           NALTW +KLSLVSSVIRGITS S+ S++ DEE+  +GSSLQLYE+LSFSYPSLLQPLIHE
Sbjct: 241 NALTWTEKLSLVSSVIRGITSGSDFSQNIDEESDGNGSSLQLYEKLSFSYPSLLQPLIHE 300

Query: 301 RDTYLAWSLKRSKAVNKSKRVVGVIGRGHMSGVIYAIISDQGDLRFRDVAGKRAGE-SSN 360
           RDTYLAWSLKRSKAVNKSKRVVGVIGRGHM+GVIYAI SDQG+LRFRD+AGK+AGE +SN
Sbjct: 301 RDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVIYAITSDQGNLRFRDLAGKKAGEGNSN 360

Query: 361 GFVSSLLQSLVRDTIIGVVFWVLYEQLKQQHLVP 394
           GFVSSLL+SLVRDTIIGV+ WVLYEQLKQ H++P
Sbjct: 361 GFVSSLLKSLVRDTIIGVILWVLYEQLKQLHIIP 380

[Close]

BLAST of Carg26815 vs. NCBI nr
Match: XP_004140793.1 (PREDICTED: traB domain-containing protein isoform X1 [Cucumis sativus])

HSP 1 Score: 624.8 bits (1610), Expect = 2.0e-175
Identity = 325/394 (82.49%), Postives = 350/394 (88.83%), Query Frame = 0


Query: 1   MESLKSTPIPIFRPYPFSIATKSVKPIKVSIRPPPSDFDFRVEISRDSRAAIAEAHPELL 60
           ME+LKST IPIF+  P S  TKS+KPI VSI PPPSDFDFR+EISRDSRA IAE HPELL
Sbjct: 23  MEALKSTAIPIFKSSPLSFPTKSLKPINVSINPPPSDFDFRLEISRDSRATIAETHPELL 82

Query: 61  DLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNV 120
           DL DDG LVLV+K +FGPVPAWRAEFVEP+AIWLV TSHISPKSVKDVERVVRAVKPDNV
Sbjct: 83  DLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHISPKSVKDVERVVRAVKPDNV 142

Query: 121 VVELCRSRQNEHLKTIPDICSRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINL 180
           VVELCR              SRAGIMYTL+TGEP QKLKSNMFSLSGDGFLGAV RSINL
Sbjct: 143 VVELCR--------------SRAGIMYTLDTGEPDQKLKSNMFSLSGDGFLGAVVRSINL 202

Query: 181 GGQTALALRLLLAAFSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAW 240
           GGQTALALRLLLA FSSKISSDVNRPFG EFRAARKASEEVGAQIVLGDRPIEITLERAW
Sbjct: 203 GGQTALALRLLLAVFSSKISSDVNRPFGDEFRAARKASEEVGAQIVLGDRPIEITLERAW 262

Query: 241 NALTWNQKLSLVSSVIRGITSQSNVSRSNDEEAGRDGSSLQLYEQLSFSYPSLLQPLIHE 300
           NAL W +KLSLVSSVIRGITS+S+ S++ DEE+  +GSSLQLYE+L FSYPSLLQPLIHE
Sbjct: 263 NALIWTEKLSLVSSVIRGITSESDFSQNIDEESDGNGSSLQLYEKLGFSYPSLLQPLIHE 322

Query: 301 RDTYLAWSLKRSKAVNKSKRVVGVIGRGHMSGVIYAIISDQGDLRFRDVAGKRAGE-SSN 360
           RDTYLAWSLKRSKAVNKSKRVVGVIGRGHM+GVIYAI SDQG+LRFRD+AGK+AGE +SN
Sbjct: 323 RDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVIYAITSDQGNLRFRDLAGKKAGEGNSN 382

Query: 361 GFVSSLLQSLVRDTIIGVVFWVLYEQLKQQHLVP 394
           GFVSSLL+ LVRDTIIGV+ WVLYEQLKQ H++P
Sbjct: 383 GFVSSLLKDLVRDTIIGVIVWVLYEQLKQLHIIP 402

[Close]

BLAST of Carg26815 vs. TAIR10
Match: AT5G52030.2 (TraB family protein)

HSP 1 Score: 469.5 bits (1207), Expect = 2.0e-132
Identity = 248/388 (63.92%), Postives = 297/388 (76.55%), Query Frame = 0


Query: 7   TPIPIFRPYPFSIATKSVKPIKVSIRPPPSDFDFRVEISRDSRAAIAEAHPELLDLVDDG 66
           T  P F PY      + +K + VS++ PP DFDFR +I+ +SRAAIA+ +PELLDL D+G
Sbjct: 10  TLFPFFTPYTSKHIFRPIK-VSVSVQTPPPDFDFRNDIASESRAAIAKTYPELLDLADNG 69

Query: 67  TLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNVVVELCR 126
           TL+L++K+ FGPVPAWR EFVEPEAIWLV TSHISP+S   VERVVR VKPDNV VELCR
Sbjct: 70  TLILLQKQSFGPVPAWRKEFVEPEAIWLVGTSHISPESASIVERVVRTVKPDNVAVELCR 129

Query: 127 SRQNEHLKTIPDICSRAGIMYTLET-GEPHQKLKSNMFSLSGDGFLGAVGRSINLGGQTA 186
           SR+   ++        AGIMYT    GE  Q LKS   SL+G GFLGAVGRS++LGGQTA
Sbjct: 130 SRK---VQFFIQTKFGAGIMYTSSVGGEVDQNLKSGELSLTGTGFLGAVGRSLDLGGQTA 189

Query: 187 LALRLLLAAFSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTW 246
           LALRLLLA FSSK+SS  +RPFG EFRAARKASEEVGAQ+VLGDRPIEITL+RAWN+L W
Sbjct: 190 LALRLLLAVFSSKLSSVADRPFGDEFRAARKASEEVGAQLVLGDRPIEITLQRAWNSLKW 249

Query: 247 NQKLSLVSSVIRGITSQSNVSRS--NDEEAGRDGSSLQLYEQLSFSYPSLLQPLIHERDT 306
            +K +LV +V R ITS S +S +   ++E   +  SLQLYE+LSFSYP+LL PLIHERDT
Sbjct: 250 GEKFNLVMAVTRVITSSSGISAAELKEQETDENSGSLQLYERLSFSYPALLMPLIHERDT 309

Query: 307 YLAWSLKRSKAVNKSKRVVGVIGRGHMSGVIYAIISDQGDLRFRDVAGK------RAGES 366
           YLAWSLKRSKAVN  K VVGVIG+GHM+GVIYA++SD GDLRFRD+ G+        G +
Sbjct: 310 YLAWSLKRSKAVNGCKTVVGVIGKGHMNGVIYALVSDSGDLRFRDLVGRGDSYNGGTGTT 369

Query: 367 SNGFVSSLLQSLVRDTIIGVVFWVLYEQ 386
           SNG++  +L+S VRDTIIG + W LYEQ
Sbjct: 370 SNGWIQKVLKSFVRDTIIGFLLWELYEQ 393

[Close]

BLAST of Carg26815 vs. TAIR10
Match: AT2G32340.1 (TraB family protein)

HSP 1 Score: 98.6 bits (244), Expect = 9.1e-21
Identity = 70/245 (28.57%), Postives = 121/245 (49.39%), Query Frame = 0


Query: 92  IWLVATSHISPKSVKDVERVVRAVKPDNVVVELCRSRQNEHLKTIPDICSRAGIMYTLET 151
           ++LV T+H+S +S ++VE V+ A+KP  V +ELC SR +        +C +    + +E 
Sbjct: 97  VYLVGTAHVSQESCREVEAVISALKPQAVFLELCSSRLSILTPQTVKVCCQEPPTW-MEM 156

Query: 152 GEPHQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAAFSSKISSDVNRPFGSEF 211
               +K K N+F +     L    + + +                           G+EF
Sbjct: 157 IYMWKK-KHNLFEIVYGYILAKAAKKLEVFP-------------------------GAEF 216

Query: 212 RAARKASEEVGAQIVLGDRPIEITLERAWNALTWNQKLSLVSSVIRGITSQSNVSRSND- 271
           R   + + + G ++ LGDR ++ITL+R W  +    K+ LV S++       N       
Sbjct: 217 RVGFEEANKYGGRVFLGDRSVQITLQRTWGKMPLWHKIKLVYSIVSQAVFLPNPKELEKM 276

Query: 272 -EEAGRDGSSLQL-YEQLSFSYPSLLQPLIHERDTYLAWSLKRSKAVNKSKRVVGVIGRG 331
            ++ G DG  L L  +++S  +P+L++ L+HERD Y+A+ L R  + + S  VV V+GRG
Sbjct: 277 LKDLG-DGDMLTLAIQEMSTEFPTLMETLVHERDKYMAYQLLRIASEHSS--VVAVVGRG 311

Query: 332 HMSGV 334
           H+ G+
Sbjct: 337 HLQGI 311

[Close]

BLAST of Carg26815 vs. TAIR10
Match: AT1G05270.1 (TraB family protein)

HSP 1 Score: 94.0 bits (232), Expect = 2.2e-19
Identity = 69/250 (27.60%), Postives = 118/250 (47.20%), Query Frame = 0


Query: 92  IWLVATSHISPKSVKDVERVVRAVKPDNVVVELCRSR------QNEHLKTIPDICSRAGI 151
           ++LV T+H+S +S  +VE ++  +KP+ V VELC SR      Q   + T+ D+      
Sbjct: 111 VYLVGTAHVSKQSCLEVEAIISILKPEVVFVELCSSRLSVLKPQTLKIPTMSDMIE---- 170

Query: 152 MYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAAFSSKISSDVNR 211
                      K K N F                          +L   F +KI+S +  
Sbjct: 171 ---------SWKQKQNTFG-------------------------ILYGWFLAKIASHLEV 230

Query: 212 PFGSEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWNQKLSLVSSVIRGITSQSNV 271
             G+EFR A + + + G +++LGDRP++ITL+R W  +    K+  + S++         
Sbjct: 231 FPGAEFRVAYEEAIKYGGKVILGDRPVQITLKRTWAKMPLWHKVKFLYSILFQAVFLPGA 290

Query: 272 SRSNDEEAGRDGSSL--QLYEQLSFSYPSLLQPLIHERDTYLAWSLKRSKAVNKSKRVVG 331
                     D   +   + +++S  +P+L+  ++HERD Y+A SL R  + + S  VV 
Sbjct: 291 EELEKMLKDMDNVDMVTLVIQEMSKEFPTLMDTIVHERDQYMASSLLRVASDHSS--VVA 320

Query: 332 VIGRGHMSGV 334
           VIG+GH++G+
Sbjct: 351 VIGKGHINGI 320

[Close]

BLAST of Carg26815 vs. Swiss-Prot
Match: sp|Q58DF3|TRABD_BOVIN (TraB domain-containing protein OS=Bos taurus OX=9913 GN=TRABD PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 6.5e-16
Identity = 89/324 (27.47%), Postives = 151/324 (46.60%), Query Frame = 0


Query: 34  PPSDFDFRVEISRDSRAAIAE---AHPELLDLVDDGTLVL---VEKRRFGP-VPAWRAEF 93
           PP + D    ++  +  A+       P+ L  VD   L+L   +++RR  P +P    E 
Sbjct: 8   PPHEADTEPVVTSGASEAVPRVLPGDPQNLSDVDAFNLLLEMKLKRRRERPNLPHTVTEL 67

Query: 94  VEPEA--IWLVATSHISPKSVKDVERVVRAVKPDNVVVELCRSRQNEHLKTIPDICSRAG 153
           V  +   +++V T+H S  S +DV + +R V+PD VVVELC+ R                
Sbjct: 68  VAEDGSRVYVVGTAHFSDDSKRDVVKTIREVQPDVVVVELCQYR---------------- 127

Query: 154 IMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAAFSSKISSDVN 213
            +  L+  E     ++   SL        + ++I   G  +  +++LL   S+ I+  + 
Sbjct: 128 -VSMLKMDERTLLREAKEISLE------KLQQAIRQNGVASGLMQMLLLKVSAHITEQLG 187

Query: 214 RPFGSEFRAA-RKASEEVGAQIVLGDRPIEITLERAWNALTWNQKLSLVSSVIRGITSQS 273
              G EFR A ++AS     +  LGDRPI +T +RA  AL+  QK+ L      G+   S
Sbjct: 188 VAPGGEFREAFKEASRVPFCKFHLGDRPIPVTFKRAIAALSLWQKVKLA----WGLCFLS 247

Query: 274 NVSRSNDEEAGRDGSSL-QLYEQLSFSYPSLLQPLIHERDTYLAWSLKRS-------KAV 333
           +    +D E  +    L Q+  ++   +P L + ++ ERD YL + L+++       +A 
Sbjct: 248 DPISKDDVERCKQKDLLEQMMAEMVGEFPDLHRTIVSERDVYLTYMLRQAARRLELPRAS 304

[Close]

BLAST of Carg26815 vs. Swiss-Prot
Match: sp|Q9H4I3|TRABD_HUMAN (TraB domain-containing protein OS=Homo sapiens OX=9606 GN=TRABD PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.9e-15
Identity = 82/303 (27.06%), Postives = 147/303 (48.51%), Query Frame = 0


Query: 52  IAEAHPELLDLVDDGTLVL---VEKRRFGP-VPAWRAEFVEPEA--IWLVATSHISPKSV 111
           +    P+ L  VD   L+L   +++RR  P +P    + V  +   +++V T+H S  S 
Sbjct: 29  VLSGDPQNLSDVDAFNLLLEMKLKRRRQRPNLPRTVTQLVAEDGSRVYVVGTAHFSDDSK 88

Query: 112 KDVERVVRAVKPDNVVVELCRSRQNEHLKTIPDICSRAGIMYTLETGEPHQKLKSNMFSL 171
           +DV + +R V+PD VVVELC+ R +               M  ++        +S +   
Sbjct: 89  RDVVKTIREVQPDVVVVELCQYRVS---------------MLKMD--------ESTLLRE 148

Query: 172 SGDGFLGAVGRSINLGGQTALALRLLLAAFSSKISSDVNRPFGSEFRAA-RKASEEVGAQ 231
           + +  L  + +++   G  +  +++LL   S+ I+  +    G EFR A ++AS+    +
Sbjct: 149 AQELSLEKLQQAVRQNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCK 208

Query: 232 IVLGDRPIEITLERAWNALTWNQKLSLVSSVIRGITSQSNVSRSNDEEAGRDGSSL-QLY 291
             LGDRPI +T +RA  AL++ QK+ L      G+   S+    +D E  +    L Q+ 
Sbjct: 209 FHLGDRPIPVTFKRAIAALSFWQKVRLA----WGLCFLSDPISKDDVERCKQKDLLEQMM 268

Query: 292 EQLSFSYPSLLQPLIHERDTYLAWSLKRS-------KAVNKSKR------VVGVIGRGHM 334
            ++   +P L + ++ ERD YL + L+++       +A +   R      VVGV+G GH+
Sbjct: 269 AEMIGEFPDLHRTIVSERDVYLTYMLRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHV 304

[Close]

BLAST of Carg26815 vs. Swiss-Prot
Match: sp|Q99JY4|TRABD_MOUSE (TraB domain-containing protein OS=Mus musculus OX=10090 GN=Trabd PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.9e-15
Identity = 85/298 (28.52%), Postives = 145/298 (48.66%), Query Frame = 0


Query: 57  PELLDLVDDGTLVL---VEKRRFGP-VPAWRAEFVEPEA--IWLVATSHISPKSVKDVER 116
           P+ +  VD   L+L   +++RR  P +P    + V  +   +++V T+H S  S +DV +
Sbjct: 33  PQNISDVDAFNLLLEMKLKRRRERPNLPRTVTQLVAEDGSRVYVVGTAHFSDDSKRDVVK 92

Query: 117 VVRAVKPDNVVVELCRSRQNEHLKTIPDICSRAGIMYTLETGEPHQKLKSNMFSLSGDGF 176
            +R V+PD VVVELC+ R +  LK       R     +LE      KL+           
Sbjct: 93  TIREVQPDVVVVELCQYRVS-MLKMDERTLLREAKEVSLE------KLQ----------- 152

Query: 177 LGAVGRSINLGGQTALALRLLLAAFSSKISSDVNRPFGSEFRAA-RKASEEVGAQIVLGD 236
                +++   G  +  +++LL   S+ I+  +    G EFR A ++AS+    +  LGD
Sbjct: 153 -----QAVRQNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCKFHLGD 212

Query: 237 RPIEITLERAWNALTWNQKLSLVSSVIRGITSQSNVSRSNDEEAGRDGSSL-QLYEQLSF 296
           RPI +T +RA  AL++ QK+ L      G+   S+    +D E  +    L Q+  ++  
Sbjct: 213 RPIPVTFKRAIAALSFWQKVKLA----WGLCFLSDPISKDDVERCKQKDLLEQMMAEMIG 272

Query: 297 SYPSLLQPLIHERDTYLAWSLKRS-------KAVNKSKR------VVGVIGRGHMSGV 334
            +P L + ++ ERD YL + L+++       +A +   R      VVGV+G GH+ G+
Sbjct: 273 EFPDLHRTIVSERDVYLTYMLRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGI 303

[Close]

BLAST of Carg26815 vs. Swiss-Prot
Match: sp|Q58760|Y1365_METJA (Uncharacterized protein MJ1365 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1365 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 6.3e-11
Identity = 67/307 (21.82%), Postives = 141/307 (45.93%), Query Frame = 0


Query: 92  IWLVATSHISPKSVKDVERVVRAVKPDNVVVELCRSRQNEHLKTIPDICSRAGIMYTLET 151
           I+L+ T+H+S  S+++VE+++ +V P+ + VEL   R                  ++L T
Sbjct: 19  IYLIGTAHVSKDSIEEVEKIISSVSPEGIAVELDDRR-----------------FFSLIT 78

Query: 152 GEPHQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAAFSSKISSDVNRPFGSEF 211
            E  +                 + + +  G      + L+LA    KI        GSE 
Sbjct: 79  NEEKKV---------------DLKKVLKEGNFLKFFIYLILANSQKKIGESFGIKPGSEM 138

Query: 212 RAARKASEEVGAQIVLGDRPIEITLERAWNALTWNQKLSLVSSVIRGITSQSNVSRSND- 271
           + A + + + G  I L DR I+ITL R  + +T+ +K+ +   ++   + + ++   +D 
Sbjct: 139 KKAIEIASKYGLPIYLIDRDIDITLSRLMDRMTFKEKMKIFWELLN--SDEEDLELDDDL 198

Query: 272 --EEAGRDGSSLQLYEQLSFSYPSLLQPLIHERDTYLAWSLKRSKAVNKSKR-VVGVIGR 331
             +        ++L +++S   P++ + L+ ERD ++A   KR   ++K+K  +V V+G 
Sbjct: 199 LNDMVKNPEKFIKLLKEIS---PTIYEVLVDERDRFMA---KRLFELSKNKNSLVAVVGA 258

Query: 332 GHMSGVIYAI--ISDQGDLRFRDVAGKRAGESSNGFVSSLLQSLVRDTIIGVVFWVLYEQ 391
           GH+ G++  +  + +  D+   ++   +  + S   +  LL   +  TII +  +++   
Sbjct: 259 GHVEGIVRYLKKLENGNDIDLMELIKVKKRKKS---LKKLLTYGISLTIISIFLYMICYA 282

Query: 392 LKQQHLV 393
           L    L+
Sbjct: 319 LNNPELL 282

[Close]

BLAST of Carg26815 vs. TrEMBL
Match: tr|A0A1S3AXQ2|A0A1S3AXQ2_CUCME (traB domain-containing protein OS=Cucumis melo OX=3656 GN=LOC103484044 PE=4 SV=1)

HSP 1 Score: 627.5 bits (1617), Expect = 2.1e-176
Identity = 328/394 (83.25%), Postives = 350/394 (88.83%), Query Frame = 0


Query: 1   MESLKSTPIPIFRPYPFSIATKSVKPIKVSIRPPPSDFDFRVEISRDSRAAIAEAHPELL 60
           ME LK   IPIFR YP S ATK +KPI VSI+PPPSDFDFR EIS DSRAAIAE HPELL
Sbjct: 1   MEVLKFAAIPIFRSYPLSFATKFLKPINVSIKPPPSDFDFRSEISEDSRAAIAETHPELL 60

Query: 61  DLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNV 120
           DL DDG LVLV+K +FGPVPAWRAEFVEP+AIWLV TSHIS KSVKDVERVVRAVKPDNV
Sbjct: 61  DLADDGILVLVDKTKFGPVPAWRAEFVEPQAIWLVGTSHISSKSVKDVERVVRAVKPDNV 120

Query: 121 VVELCRSRQNEHLKTIPDICSRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINL 180
           VVELCR              SRAGIMYTL+TGEP QKLKSNMFSLSGDGFLGAVGRSINL
Sbjct: 121 VVELCR--------------SRAGIMYTLDTGEPDQKLKSNMFSLSGDGFLGAVGRSINL 180

Query: 181 GGQTALALRLLLAAFSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAW 240
           GGQTALALRLLLA FSSKISSDVNRPFG EFRAARKASEEVGAQIVLGDRPIEITLERAW
Sbjct: 181 GGQTALALRLLLAVFSSKISSDVNRPFGDEFRAARKASEEVGAQIVLGDRPIEITLERAW 240

Query: 241 NALTWNQKLSLVSSVIRGITSQSNVSRSNDEEAGRDGSSLQLYEQLSFSYPSLLQPLIHE 300
           NALTW +KLSLVSSVIRGITS S+ S++ DEE+  +GSSLQLYE+LSFSYPSLLQPLIHE
Sbjct: 241 NALTWTEKLSLVSSVIRGITSGSDFSQNIDEESDGNGSSLQLYEKLSFSYPSLLQPLIHE 300

Query: 301 RDTYLAWSLKRSKAVNKSKRVVGVIGRGHMSGVIYAIISDQGDLRFRDVAGKRAGE-SSN 360
           RDTYLAWSLKRSKAVNKSKRVVGVIGRGHM+GVIYAI SDQG+LRFRD+AGK+AGE +SN
Sbjct: 301 RDTYLAWSLKRSKAVNKSKRVVGVIGRGHMNGVIYAITSDQGNLRFRDLAGKKAGEGNSN 360

Query: 361 GFVSSLLQSLVRDTIIGVVFWVLYEQLKQQHLVP 394
           GFVSSLL+SLVRDTIIGV+ WVLYEQLKQ H++P
Sbjct: 361 GFVSSLLKSLVRDTIIGVILWVLYEQLKQLHIIP 380

[Close]

BLAST of Carg26815 vs. TrEMBL
Match: tr|A0A2I4FGJ1|A0A2I4FGJ1_9ROSI (traB domain-containing protein isoform X1 OS=Juglans regia OX=51240 GN=LOC108998613 PE=4 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 2.4e-148
Identity = 278/391 (71.10%), Postives = 317/391 (81.07%), Query Frame = 0


Query: 1   MESLKSTPIPIFRPYPFSIATKSVKPIKVSIRPPPSDFDFRVEISRDSRAAIAEAHPELL 60
           ME+LKS+  PIF   PF ++ K  KP KVSI+PPP DFDFR EI  DSR  IA+ +PELL
Sbjct: 1   METLKSS-FPIFTTNPFCLSKKPRKPSKVSIKPPPPDFDFRTEILDDSRTIIAQTYPELL 60

Query: 61  DLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNV 120
           DL D G LVL+EKRR+GPVPAWR EFVEPE IWLV T+HIS +SV+DVERVVRAVKPDNV
Sbjct: 61  DLADTGNLVLIEKRRYGPVPAWRTEFVEPEKIWLVGTTHISQESVEDVERVVRAVKPDNV 120

Query: 121 VVELCRSRQNEHLKTIPDICSRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINL 180
           VVELCR              SRAGIMYT   G   Q+L+SNMFSLSG  F GAVGRSINL
Sbjct: 121 VVELCR--------------SRAGIMYTSNDGAAVQQLRSNMFSLSGTEFFGAVGRSINL 180

Query: 181 GGQTALALRLLLAAFSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAW 240
           GGQTALALRLLLA FSSKISSD+NRPFG EFR ARK SEE+GAQIVLGDRPIEITLERAW
Sbjct: 181 GGQTALALRLLLAVFSSKISSDINRPFGGEFRVARKVSEEIGAQIVLGDRPIEITLERAW 240

Query: 241 NALTWNQKLSLVSSVIRGITSQSNVSRSNDEEAGRDGSSLQLYEQLSFSYPSLLQPLIHE 300
           N+LTWN+KLSLV+SVIRGITS S++SR+  +E+  D S+ +LYEQLSFSYPSLLQPLIHE
Sbjct: 241 NSLTWNEKLSLVTSVIRGITSSSDMSRNGLKESNSDDSTFRLYEQLSFSYPSLLQPLIHE 300

Query: 301 RDTYLAWSLKRSKAVNKSKRVVGVIGRGHMSGVIYAIISDQGDLRFRDVAGKRAGE---- 360
           RDTYLAWSLKRSKAVN SKRVVGVIG+GHM+GVIYA++SDQG+LRFRD+AG +  +    
Sbjct: 301 RDTYLAWSLKRSKAVNNSKRVVGVIGKGHMNGVIYALVSDQGNLRFRDLAGGKRPDGDDH 360

Query: 361 SSNGFVSSLLQSLVRDTIIGVVFWVLYEQLK 388
            SN  V  LL+SL RDT+IG++ W LYEQ+K
Sbjct: 361 GSNRLVDGLLKSLARDTVIGILLWALYEQIK 376

[Close]

BLAST of Carg26815 vs. TrEMBL
Match: tr|B9R9G9|B9R9G9_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1497430 PE=4 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 2.4e-148
Identity = 276/388 (71.13%), Postives = 317/388 (81.70%), Query Frame = 0


Query: 1   MESLKSTPIPIFRPYPFSIATKSVKPIKVSIRPPPSDFDFRVEISRDSRAAIAEAHPELL 60
           M++L ++  PIF  YP    +K  KP+KVSI+PPP DFDFR EI ++SR  IA+ HP+LL
Sbjct: 1   MDTLLNSTFPIFSKYPNFPISKPAKPLKVSIKPPPPDFDFRSEILQESRTTIAKNHPDLL 60

Query: 61  DLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNV 120
           DL D G L+L+EKR FGPVPAWR EFVEPEAIWLV TSHIS +S   VERVVRAVKPDNV
Sbjct: 61  DLADSGNLILIEKRLFGPVPAWRTEFVEPEAIWLVGTSHISTESATQVERVVRAVKPDNV 120

Query: 121 VVELCRSRQNEHLKTIPDICSRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINL 180
           VVELCRSRQ   L  +     +AGIMYT   GE +Q+L+SNMFSLSG+GF GAVGRSINL
Sbjct: 121 VVELCRSRQVLFLFML-IYKIKAGIMYTSNEGEDNQQLRSNMFSLSGNGFFGAVGRSINL 180

Query: 181 GGQTALALRLLLAAFSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAW 240
           GGQTALALRLLLA FSSKIS+DVNRPFG EFRAARK SEE+GAQIVLGDRPIEITLERAW
Sbjct: 181 GGQTALALRLLLALFSSKISNDVNRPFGDEFRAARKVSEEIGAQIVLGDRPIEITLERAW 240

Query: 241 NALTWNQKLSLVSSVIRGITSQSNVSRSNDEEAGRDGSSLQLYEQLSFSYPSLLQPLIHE 300
           NAL W +KLSLVSSV+RGITS S+ S+ + +    D  +  LYE+LSFSYPSLL PLIHE
Sbjct: 241 NALKWKEKLSLVSSVVRGITSSSHTSKKDFKVPDTDDDTFLLYEKLSFSYPSLLPPLIHE 300

Query: 301 RDTYLAWSLKRSKAVNKSKRVVGVIGRGHMSGVIYAIISDQGDLRFRDVAGKR-AGESSN 360
           RDTYLAWSLKRSKAVN SKRVVGVIG+GHM+GVIYA++SD G+LRFRD+ G+R +G  S 
Sbjct: 301 RDTYLAWSLKRSKAVNNSKRVVGVIGKGHMNGVIYALVSDLGNLRFRDLVGQRQSGSGSK 360

Query: 361 GFVSSLLQSLVRDTIIGVVFWVLYEQLK 388
           G V  LL+SLVRDT+IGVV WVLYEQ+K
Sbjct: 361 GIVDELLKSLVRDTVIGVVLWVLYEQIK 387

[Close]

BLAST of Carg26815 vs. TrEMBL
Match: tr|A0A2K1YD24|A0A2K1YD24_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_012G133900v3 PE=4 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 9.0e-148
Identity = 272/389 (69.92%), Postives = 318/389 (81.75%), Query Frame = 0


Query: 1   MESLKSTPIPIFRPYPFSIATKSVKPIKVSIRPPPSDFDFRVEISRDSRAAIAEAHPELL 60
           ME+L   P PIF   P  + TK  KP+KVSI+PPP DFDFR EI ++SRA I+  +PELL
Sbjct: 1   METLLKIPFPIFSNNPHILTTKPTKPLKVSIKPPPPDFDFRSEILQESRATISRTYPELL 60

Query: 61  DLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNV 120
           DL +DGTL+L+EK+ FGPVP+WR EFVEPEAIWLV T+HIS +S  +VERVVRAVKPDNV
Sbjct: 61  DLANDGTLLLIEKKLFGPVPSWRTEFVEPEAIWLVGTTHISSQSAAEVERVVRAVKPDNV 120

Query: 121 VVELCRSRQNEHLKTIPDICSRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINL 180
           VVELCR              SRAGIMY  + GE  Q+L+S+MFSLSG GF GAVGRSINL
Sbjct: 121 VVELCR--------------SRAGIMYISDEGEVGQQLRSSMFSLSGTGFFGAVGRSINL 180

Query: 181 GGQTALALRLLLAAFSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAW 240
           GGQTALALRLLLA FSSKISSDVNRPFG EFRAARK +EE+GAQIVLGDRPIEITLERAW
Sbjct: 181 GGQTALALRLLLALFSSKISSDVNRPFGDEFRAARKVAEEIGAQIVLGDRPIEITLERAW 240

Query: 241 NALTWNQKLSLVSSVIRGITSQSNVSRSNDEEAGRDGSSLQLYEQLSFSYPSLLQPLIHE 300
           N+L W +KLSLV +V+RGITS S++S++N + +  D  + QLYEQLSFSYPSLLQPLIHE
Sbjct: 241 NSLKWREKLSLVIAVVRGITSSSDISKNNFKASSTDDRTFQLYEQLSFSYPSLLQPLIHE 300

Query: 301 RDTYLAWSLKRSKAVNKSKRVVGVIGRGHMSGVIYAIISDQGDLRFRDVAGKRAG--ESS 360
           RDTYLAWSLKRSKAVN  KRVVGVIG+GHM+GVIYA+ISDQG+LRFRD+AG+R+   + S
Sbjct: 301 RDTYLAWSLKRSKAVNNGKRVVGVIGKGHMNGVIYALISDQGNLRFRDLAGRRSSGDDGS 360

Query: 361 NGFVSSLLQSLVRDTIIGVVFWVLYEQLK 388
           NGFV+ L++SLV DT IG++ W LYEQLK
Sbjct: 361 NGFVAGLVKSLVIDTAIGILLWQLYEQLK 375

[Close]

BLAST of Carg26815 vs. TrEMBL
Match: tr|V4RLJ8|V4RLJ8_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10005112mg PE=4 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 2.6e-147
Identity = 271/388 (69.85%), Postives = 320/388 (82.47%), Query Frame = 0


Query: 1   MESLKSTPIPIFRPYPFSIATKSVKPIKVSIRPPPSDFDFRVEISRDSRAAIAEAHPELL 60
           ME+ +    PIF   P  ++TK +KP KVSI+PPP DFDFR EI  DS+A IA+A PELL
Sbjct: 21  MEAFQKATFPIFSANPNLLSTKPIKPFKVSIKPPPQDFDFRTEILSDSQATIAKACPELL 80

Query: 61  DLVDDGTLVLVEKRRFGPVPAWRAEFVEPEAIWLVATSHISPKSVKDVERVVRAVKPDNV 120
           +L DDGTLVL++KR+FGPVPAWR+EFVEPE IWL+ T+H+S  S  DVERVVRA+KPDNV
Sbjct: 81  NLADDGTLVLIQKRQFGPVPAWRSEFVEPENIWLIGTTHLSQDSAADVERVVRAIKPDNV 140

Query: 121 VVELCRSRQNEHLKTIPDICSRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINL 180
           VVELCR              SRAGIMYT   GE  Q+L+SNMFSLSG GF GAVGRSI+L
Sbjct: 141 VVELCR--------------SRAGIMYTSNGGENDQQLRSNMFSLSGTGFFGAVGRSIDL 200

Query: 181 GGQTALALRLLLAAFSSKISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAW 240
           GGQTALALRLLLA FSSKISSDVNRPFG EFRAARK +EEVGAQIVLGDRPIEITLERAW
Sbjct: 201 GGQTALALRLLLALFSSKISSDVNRPFGDEFRAARKVAEEVGAQIVLGDRPIEITLERAW 260

Query: 241 NALTWNQKLSLVSSVIRGITSQSNVSRSNDEEAGRDGSSLQLYEQLSFSYPSLLQPLIHE 300
           N+L WN+KL+L+ +VIRGIT  S++S  N +E   D S+ QLY++LSFS PSLL PLIHE
Sbjct: 261 NSLKWNEKLNLLINVIRGITLPSDMSLDNLKEPSPDDSTFQLYKKLSFSCPSLLLPLIHE 320

Query: 301 RDTYLAWSLKRSKAVNKSKRVVGVIGRGHMSGVIYAIISDQGDLRFRDVAGKR-AGESSN 360
           RDTYLAWSLKRSKAVN SK+VVGVIG+GHM+GVIYA++SDQG+LRFRD+AGKR +G+ SN
Sbjct: 321 RDTYLAWSLKRSKAVNNSKKVVGVIGKGHMNGVIYALVSDQGNLRFRDLAGKRSSGDGSN 380

Query: 361 GFVSSLLQSLVRDTIIGVVFWVLYEQLK 388
           G+++SLL+SLVRDT+IG++ W LYEQ+K
Sbjct: 381 GWIASLLKSLVRDTVIGILLWALYEQVK 394

The following BLAST results are available for this feature:

BLAST of Carg26815 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022945049.1	8.4e-206	96.44	traB domain-containing protein isoform X1 [Cucurbita moschata]	[more]
XP_023542003.1	8.1e-201	94.15	traB domain-containing protein isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022968022.1	9.9e-199	92.62	traB domain-containing protein isoform X1 [Cucurbita maxima]	[more]
XP_008439166.1	3.1e-176	83.25	PREDICTED: traB domain-containing protein [Cucumis melo]	[more]
XP_004140793.1	2.0e-175	82.49	PREDICTED: traB domain-containing protein isoform X1 [Cucumis sativus]	[more]

BLAST of Carg26815 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G52030.2	2.0e-132	63.92	TraB family protein	[more]
AT2G32340.1	9.1e-21	28.57	TraB family protein	[more]
AT1G05270.1	2.2e-19	27.60	TraB family protein	[more]

BLAST of Carg26815 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q58DF3\|TRABD_BOVIN	6.5e-16	27.47	TraB domain-containing protein OS=Bos taurus OX=9913 GN=TRABD PE=2 SV=1	[more]
sp\|Q9H4I3\|TRABD_HUMAN	1.9e-15	27.06	TraB domain-containing protein OS=Homo sapiens OX=9606 GN=TRABD PE=1 SV=1	[more]
sp\|Q99JY4\|TRABD_MOUSE	1.9e-15	28.52	TraB domain-containing protein OS=Mus musculus OX=10090 GN=Trabd PE=1 SV=1	[more]
sp\|Q58760\|Y1365_METJA	6.3e-11	21.82	Uncharacterized protein MJ1365 OS=Methanocaldococcus jannaschii (strain ATCC 430...	[more]

BLAST of Carg26815 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AXQ2\|A0A1S3AXQ2_CUCME	2.1e-176	83.25	traB domain-containing protein OS=Cucumis melo OX=3656 GN=LOC103484044 PE=4 SV=1	[more]
tr\|A0A2I4FGJ1\|A0A2I4FGJ1_9ROSI	2.4e-148	71.10	traB domain-containing protein isoform X1 OS=Juglans regia OX=51240 GN=LOC108998...	[more]
tr\|B9R9G9\|B9R9G9_RICCO	2.4e-148	71.13	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1497430 PE=4 SV=1	[more]
tr\|A0A2K1YD24\|A0A2K1YD24_POPTR	9.0e-148	69.92	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_012G133900v3 PE=...	[more]
tr\|V4RLJ8\|V4RLJ8_9ROSI	2.6e-147	69.85	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10005112mg PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002816	Pheromone_shutdown_TraB

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26815-RA	Carg26815-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002816	Pheromone shutdown, TraB	PFAM	PF01963	TraB	coord: 82..332 e-value: 9.3E-22 score: 78.1
None	No IPR available	PANTHER	PTHR21530	PHEROMONE SHUTDOWN PROTEIN	coord: 5..388
None	No IPR available	PANTHER	PTHR21530:SF1	TRAB FAMILY PROTEIN	coord: 5..388

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26815	Cla006210	Watermelon (97103) v1	carwmB0009
Carg26815	Csa3G180270	Cucumber (Chinese Long) v2	carcuB0007
Carg26815	MELO3C006871	Melon (DHL92) v3.5.1	carmeB0005
Carg26815	ClCG05G007790	Watermelon (Charleston Gray)	carwcgB0007
Carg26815	CSPI03G16570	Wild cucumber (PI 183967)	carcpiB0007
Carg26815	Cucsa.251010	Cucumber (Gy14) v1	carcgyB0006
Carg26815	CmaCh18G012190	Cucurbita maxima (Rimu)	carcmaB0011
Carg26815	CmoCh18G012400	Cucurbita moschata (Rifu)	carcmoB0011
Carg26815	Lsi05G012640	Bottle gourd (USVL1VR-Ls)	carlsiB006
Carg26815	Cp4.1LG09g01180	Cucurbita pepo (Zucchini)	carcpeB0008
Carg26815	CsGy3G016690	Cucumber (Gy14) v2	carcgybB0006
Carg26815	MELO3C006872.2	Melon (DHL92) v3.6.1	carmedB0006
Carg26815	CsaV3_3G016780	Cucumber (Chinese Long) v3	carcucB0007
Carg26815	Cla97C05G089750	Watermelon (97103) v2	carwmbB0006
Carg26815	Bhi01G000998	Wax gourd	carwgoB0008

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg26815	Silver-seed gourd	carcarB005
Carg26815	Cucurbita maxima (Rimu)	carcmaB0010
Carg26815	Cucurbita moschata (Rifu)	carcmoB0010
Carg26815	Cucurbita pepo (Zucchini)	carcpeB0009