CmoCh18G012330 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh18G012330
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionMRNA, cds, clone: RAFL24-31-B07, putative
LocationCmo_Chr18 : 12188055 .. 12191354 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCCGATCCCTTCCTTTTGCCTGAGATTGGTCCTGATGGCCTTGCCAGGGAAGCTCCTGTAATTGCCTACACTGAAAAGGTATTCGATCTGACTTTTGGGCTACAAGATTTTTCTTAATTTAATTCTTATTTTATCTTTTCAGTTTTGCTTATTTGTTATCGGATTATGTTGCAGATAATCGAGGAAGGGCGTCTTCAATTGAGAAAGTACGAATTTCTTTTATTACCTTTACGGATCTGGTTTTTCTCACATTATAACTCTCTTTATGTGTTTATTTGCTTATGATTGGTAAATTAGAAGTATTACTTGTTATTCTATCTTCCCTGTTCACGGAAATTTTAGTGTGGGGCGTTATTCTAGTTACATTCTTACATGGTAACAGATATGGATGCAGTAAGTCTTTGTTTGTAGTTTATCAAGTGTGCAATTAATGAAGGAAGTCTTGAAGGAATCATCTTGGCTTAGTTAATCTTTTTTTCTTCTTGGTGTATTACGAGTTTGTGTTGTAACCAAATGTCGATACCAGTGGTTGTACCAAAAGGTCACAACCATCGTTGCTCTGATACCACTTGTTGTAACCTAATGTCAAAACCTTCAATGCTTTGATACTAATTGTTATGGAGTGGAACGAATGTCTAACCTCTAAGCTCTGTTTAGGTTGAAGGTTAATTAAGTTAAGATCAATGACCTAGTGAATTGTAACAGCTAACCGATATTGTCTATTAAGCCCCTCATCACTTCCTGACGTAGTGAATTTCTTATAAGGGTGTGGCAACTTCTCTTTAGTGGATGTGTATTAAAACCTTGAGGGGAATCCCAGAAGGGAAAGCCCAAAAAGGACAATATCTACTAACGGTGTATTACGAGTTTGTGTTGTAACCTAATGTCAAACCTTTGATGCTTTGATACTGATGGTTGTACCAAAAGATCACAACCATCGTTGCTCTGATACCACTTGTTGTAACCTAATGTCAAAACCCTCAATGCTCTAATACTAATTGGTATGGGGTGGAACAAATGTCTAACCTCTAAGCTATGTTCAGGTTGAAGGTTAATTAAGTTAAGATCAATGACATACTGAATTGTAACGGCTAACAGATATTGTCTATTAAGCCCTCTCATCTCTTTCCAACGTAGTGAATTCCTTATATGGGTGTGGAAACCTCTCTTTAGTGGATGTGTATTAAAACCTTGAGGGAAAGCCCAAAAGGAAAAGCTCAAAGAGGACAATATCTACTAACGGTGAGTTTGGATTGTTACAAATGGTATCAAAGTCAAACATCGGGTGGTGTGTTAGCGAGGACGTTGGCTCCCAAGGGAGTGGATTGTGAGATCCCATGTCGGTTGGAGAGGGGAACGAAACATTCCTTAGGGTGTGGAAGCCTCTCTCTAATAGACGCGTTTTAAAACCTGAAGGAAAAGTCCAAAAATGACAATATCTGCTAGCGGTGGGCTTGGACTATTACATGAACTATAATTTGTATGGAGATTAAGTGAATAATCTGAACATGGGGAATTTTTATGTTTGGAAAAGATTTTTCGCATCATTCTTAAGTTTGAAGTTGGTATAGACGAATGAAGGATAGTGTTGAGGCAAAGTTCAGGAGTGTGTTGATTGGGGTAAATTGAGATATCCGAAGCATTGTAGGATAATGTGATCATTTACCATTGATTAACTCATAATGATATCTCAGACAGAGTTGATATTAGTTCCAACATCTCGTGTTGCTGATGGTTGTGATATTTGACGCCAATACTTCAAGTTGACAAGAACATAGAAGTAGACTCTTCATCAAGTTCTTTGTTTTTCTTTTCTTACCCATATCGTTAAATGGGAAATTTTGTTTATTGTTCGGGTCGTAATTTCATTCAGATACATTGATGAGAATTATTCTAAGATTCGAGATGTTGAACGAGAGTTGGCAGAGCTTACAATGGAGATGAAACTCACATCTGGTCCAAAAAAAGCAGGTTGAGCTTACTGTCAGTTGTTTTATATTCATTATTGATTTTCATTAACTGGCTTTGGCTGACCACCAAGCATGGTTACATATCTCTAGCACTCGAACTTCTGCGGAAGAAAATAGAGATGTCAACGGAAAGAATACATGCAGCCAAGTTGAAGGAAGAACAAGCAAAGAAGGTTTGCCCCTTGTCAATTTTTACACGAGTTTAGTGTAATACATTCATCTAGGCTGAGATCCCACACCGGTTGGAGAGGAGAATGAAAGGGAAAGTCCCTAGCATACGCGTTTTAAAACCTCGAGGGAAAGTCCAAAGAGGACAATATCTGCTAGTGGTGGGCTAGAGTCGTTACATGGGCTTTCTTCTTTAGATCGTTAATTGGAATTTAATGAATTGAGTCTGATGTTCTCCCTTCAGGCTTGGGAAGCAGCGTCGAAGGTAGTGCAGGACGAGGAAGCAATTAAGCAAAAGCTATGTGATGACTTGAATCATCTGGTACATAACTTTGCATTAAATTTGGTTATGTTAGAACTAACAAACACAACTTCTTGATAGTACTGTCGTTTATTCTTAATAGGTTCAAGAAAGCAATAATTCGCAGTTGACGAGGCTCGAAGAACTAAAACGAAGAATGGAAGCTTTGAATTCAAACCGAGTATCGACCTCTGTTTCTCAAGTAATGATTTCTGCTTGTTAGCCATTAACATAGCCCTGTTGAGAGATTTGATGTAAAACATATGGTTTTCAGGTTACACAAGAAGGCCAAACAATGGGGAATGCTCAGAACAGCAGAGTTGCAGATTCTTCTGGAGTTGCTACATCAACAGAAACAACAGGTGCAAAAGCAAATGAAAGTGCACGTATTCAAGCAGTCAGTGGTGATGCTCCAGTGGTGAATGGCCAAAATCAAAAGCCATCTTCTGAGACAGAAGTAAGAGGGAAAAAGAAAAACCAGTTTCATGGAAGAGGGAAGGGAATTGGAGCAGTGCCTAAAGGAAGAAGCTCTGCAGACTCTGGGTGGACTGGCTCTGGGTTTGATGTGGATGGTAGGGTATAAGCCTAAGCTCTATACTATCAACTTTCCAAATGTCAATATCAATATCAATACTCGATCAACTGTCAGAATGGTTCTTTTATTTAAACAACACCAAAAGAAAAATAAGTTTATTATAGGGTGGAATAGGAACTATACTCTTAGCCCCCATTTTTATAGTGTTCTTATTTATGCTTCTTGTTCAACTTGTTCCTGAAAGGTTAGTGTTTTCTGTACTGTCACTAGCTTGCCTGTTGAGTTGATTCTTCCACTAATGATATTTGACCAAACTAAGT

mRNA sequence

ATGGGTTCCGATCCCTTCCTTTTGCCTGAGATTGGTCCTGATGGCCTTGCCAGGGAAGCTCCTGTAATTGCCTACACTGAAAAGATAATCGAGGAAGGGCGTCTTCAATTGAGAAAATACATTGATGAGAATTATTCTAAGATTCGAGATGTTGAACGAGAGTTGGCAGAGCTTACAATGGAGATGAAACTCACATCTGGTCCAAAAAAAGCAGCACTCGAACTTCTGCGGAAGAAAATAGAGATGTCAACGGAAAGAATACATGCAGCCAAGTTGAAGGAAGAACAAGCAAAGAAGGCTTGGGAAGCAGCGTCGAAGGTAGTGCAGGACGAGGAAGCAATTAAGCAAAAGCTATGTGATGACTTGAATCATCTGGTTCAAGAAAGCAATAATTCGCAGTTGACGAGGCTCGAAGAACTAAAACGAAGAATGGAAGCTTTGAATTCAAACCGAGTATCGACCTCTGTTTCTCAAGTTACACAAGAAGGCCAAACAATGGGGAATGCTCAGAACAGCAGAGTTGCAGATTCTTCTGGAGTTGCTACATCAACAGAAACAACAGGTGCAAAAGCAAATGAAAGTGCACGTATTCAAGCAGTCAGTGGTGATGCTCCAGTGGTGAATGGCCAAAATCAAAAGCCATCTTCTGAGACAGAAGTAAGAGGGAAAAAGAAAAACCAGTTTCATGGAAGAGGGAAGGGAATTGGAGCAGTGCCTAAAGGAAGAAGCTCTGCAGACTCTGGGTGGACTGGCTCTGGGTTTGATGTGGATGGTAGGGTATAAGCCTAAGCTCTATACTATCAACTTTCCAAATGTCAATATCAATATCAATACTCGATCAACTGTCAGAATGGTTCTTTTATTTAAACAACACCAAAAGAAAAATAAGTTTATTATAGGGTGGAATAGGAACTATACTCTTAGCCCCCATTTTTATAGTGTTCTTATTTATGCTTCTTGTTCAACTTGTTCCTGAAAGGTTAGTGTTTTCTGTACTGTCACTAGCTTGCCTGTTGAGTTGATTCTTCCACTAATGATATTTGACCAAACTAAGT

Coding sequence (CDS)

ATGGGTTCCGATCCCTTCCTTTTGCCTGAGATTGGTCCTGATGGCCTTGCCAGGGAAGCTCCTGTAATTGCCTACACTGAAAAGATAATCGAGGAAGGGCGTCTTCAATTGAGAAAATACATTGATGAGAATTATTCTAAGATTCGAGATGTTGAACGAGAGTTGGCAGAGCTTACAATGGAGATGAAACTCACATCTGGTCCAAAAAAAGCAGCACTCGAACTTCTGCGGAAGAAAATAGAGATGTCAACGGAAAGAATACATGCAGCCAAGTTGAAGGAAGAACAAGCAAAGAAGGCTTGGGAAGCAGCGTCGAAGGTAGTGCAGGACGAGGAAGCAATTAAGCAAAAGCTATGTGATGACTTGAATCATCTGGTTCAAGAAAGCAATAATTCGCAGTTGACGAGGCTCGAAGAACTAAAACGAAGAATGGAAGCTTTGAATTCAAACCGAGTATCGACCTCTGTTTCTCAAGTTACACAAGAAGGCCAAACAATGGGGAATGCTCAGAACAGCAGAGTTGCAGATTCTTCTGGAGTTGCTACATCAACAGAAACAACAGGTGCAAAAGCAAATGAAAGTGCACGTATTCAAGCAGTCAGTGGTGATGCTCCAGTGGTGAATGGCCAAAATCAAAAGCCATCTTCTGAGACAGAAGTAAGAGGGAAAAAGAAAAACCAGTTTCATGGAAGAGGGAAGGGAATTGGAGCAGTGCCTAAAGGAAGAAGCTCTGCAGACTCTGGGTGGACTGGCTCTGGGTTTGATGTGGATGGTAGGGTATAA
Homology
[Close]
BLAST of CmoCh18G012330 vs. TrEMBL
Match: A0A0A0L8J1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G179140 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 1.2e-91
Identity = 203/259 (78.38%), Postives = 213/259 (82.24%), Query Frame = 1 

Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           MGSDP LLP                   IIEEG LQLRK IDEN SKIRDVERELA LTM
Sbjct: 1   MGSDPSLLP-------------------IIEEGSLQLRKCIDENLSKIRDVERELANLTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLTSGPKKAALELLRKKIEMSTER+ AAKLKEEQAKK WEAASKVVQ+EEA KQKLC+
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQEEEAAKQKLCE 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLNHLVQES+N QLTRLEELKRRMEALNS+RVSTSVS    +  TMG AQNSRV+DSSGV
Sbjct: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVS---HDVMTMGGAQNSRVSDSSGV 180

Query: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240
           AT+TE TGAK NE+   Q  S  APV+NGQNQKP SETE RGKKKNQFHGRGKGIGAVPK
Sbjct: 181 ATTTE-TGAKPNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPK 236

Query: 241 GRSSADSGWTGSGFDVDGR 260
           GRSSADSGWTGSGFDVDGR
Sbjct: 241 GRSSADSGWTGSGFDVDGR 236

[Close]
BLAST of CmoCh18G012330 vs. TrEMBL
Match: A0A061G7M2_THECC (MRNA, cds, clone: RAFL24-31-B07, putative OS=Theobroma cacao GN=TCM_015047 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.4e-82
Identity = 177/259 (68.34%), Postives = 210/259 (81.08%), Query Frame = 1 

Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           M S+P L PEIGPDGLAREAPVIAYTEKIIEE +LQL+KYI+ENYSKIRDVEREL+ LTM
Sbjct: 1   MASNPALKPEIGPDGLAREAPVIAYTEKIIEEEQLQLKKYIEENYSKIRDVERELSNLTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLT+GPKKAALE LRKKIEMSTERIH AK KEEQA+K WEAA K + DEEAIKQKLC+
Sbjct: 61  EMKLTAGPKKAALEHLRKKIEMSTERIHIAKQKEEQARKTWEAAVKALNDEEAIKQKLCE 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLN+LVQES+NSQ  RLEELKRR+EALN +R ST       + + +G+AQ +   D+S V
Sbjct: 121 DLNNLVQESSNSQFARLEELKRRLEALNPSRASTLSH---HDRKAIGSAQGAATGDASSV 180

Query: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240
             +T+ +G+ A+E+   Q   G+   +NGQNQ P+++ EV+GKKK+QF GRGKGIGAVPK
Sbjct: 181 PQTTQ-SGSTASENVPNQRNDGNVLAMNGQNQLPTNDGEVKGKKKSQFQGRGKGIGAVPK 240

Query: 241 GRSSADSGWTGSGFDVDGR 260
           GR SA  GWTG+GFDVDGR
Sbjct: 241 GRGSAAPGWTGAGFDVDGR 255

[Close]
BLAST of CmoCh18G012330 vs. TrEMBL
Match: W9S9H6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002797 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 1.7e-80
Identity = 175/256 (68.36%), Postives = 203/256 (79.30%), Query Frame = 1 

Query: 4   DPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTMEMK 63
           +P LLPEIGPDGL REAPVIAYTEKIIEE +LQLRKYI+ENYS+IRDVER+LA LTMEMK
Sbjct: 8   NPSLLPEIGPDGLPREAPVIAYTEKIIEEEQLQLRKYIEENYSRIRDVERKLANLTMEMK 67

Query: 64  LTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCDDLN 123
           LT+GPKKAALE LRKKIE+ TERI  AKLKEEQA+KAWEAASK V+DEE +KQKLC+DLN
Sbjct: 68  LTAGPKKAALEHLRKKIEIQTERIRLAKLKEEQAQKAWEAASKAVKDEEEMKQKLCEDLN 127

Query: 124 HLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGVATS 183
            LV ES+N+Q +RLEELKRR+EALN +R ST+   V  +G+  G AQ     D+S    S
Sbjct: 128 QLVHESSNTQFSRLEELKRRLEALNPSRASTNF--VPHDGKATGPAQTILAPDASSATNS 187

Query: 184 TETTGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPKGRS 243
           TE +G  A ++   +   G+ PV NG NQ+ S E E RGKKK+QFHGRGKGIGAVPKGR 
Sbjct: 188 TEQSGG-ARKTIPNEGNGGNVPVTNGLNQQASVEGEGRGKKKSQFHGRGKGIGAVPKGRG 247

Query: 244 SADSGWTGSGFDVDGR 260
           S   GWTG+GFDVDGR
Sbjct: 248 SPAPGWTGAGFDVDGR 260

[Close]
BLAST of CmoCh18G012330 vs. TrEMBL
Match: D7T1T6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0022g02350 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 4.6e-78
Identity = 169/259 (65.25%), Postives = 202/259 (77.99%), Query Frame = 1 

Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           M  +P L PEIGPDGLAREAPVIAYTE+IIEE +LQL+KYI+ENYSKIRDVEREL+ LT 
Sbjct: 1   MAQNPSLAPEIGPDGLAREAPVIAYTERIIEEEQLQLKKYIEENYSKIRDVERELSNLTF 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           E+KLT+GPKKAALELLRKKIEMSTERI  AK KEEQA+K WEAASK V+DEEA+KQKLCD
Sbjct: 61  ELKLTAGPKKAALELLRKKIEMSTERISVAKQKEEQARKVWEAASKAVKDEEAVKQKLCD 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DL+ LVQES+++Q +RLEELKRR+EALN +R S S S    +G+ +   Q+S V D+S  
Sbjct: 121 DLSQLVQESSHTQFSRLEELKRRLEALNPSRASISGS---HDGKLLPQPQSSTVPDASSA 180

Query: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240
               + +G  A E+   Q   G+ P  NG NQ+P+ E E RGKKK+   GRG+GIGAVPK
Sbjct: 181 PLIVDPSGG-AGENVANQGNGGNVPATNGHNQQPNVEGEGRGKKKSFIQGRGRGIGAVPK 240

Query: 241 GRSSADSGWTGSGFDVDGR 260
           GR S+  GWTG+GFDVDGR
Sbjct: 241 GRGSSAPGWTGAGFDVDGR 255

[Close]
BLAST of CmoCh18G012330 vs. TrEMBL
Match: A0A067F232_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025205mg PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.3e-77
Identity = 169/259 (65.25%), Postives = 204/259 (78.76%), Query Frame = 1 

Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           M SDP L PEIGPDGL+REAPVIAYTE+ IEE +LQLRK+I+ENYSKIRDVERELA LTM
Sbjct: 1   MASDPSLQPEIGPDGLSREAPVIAYTERKIEEEQLQLRKFIEENYSKIRDVERELANLTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLT+GPKKAALE LRKKIEMSTERI  AK KEEQA+K WEAAS+ V+DEEA+KQKLC+
Sbjct: 61  EMKLTAGPKKAALEHLRKKIEMSTERIRVAKQKEEQAQKVWEAASQAVKDEEAMKQKLCE 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLN+LV+ES+++Q +RLEELKRR+EALN +R S   +    +G+ MG AQ S V+D+  +
Sbjct: 121 DLNNLVKESSSTQFSRLEELKRRLEALNPSRAS---APSPYDGKPMGPAQISLVSDTPAL 180

Query: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240
             S    G   N ++  Q   G+APV++G NQ P+ E EV+GKKK  F GRGKG+G VPK
Sbjct: 181 PLSGTGAGVAQNATSN-QGDGGNAPVMSGHNQHPTVEGEVKGKKKTHFQGRGKGVGIVPK 240

Query: 241 GRSSADSGWTGSGFDVDGR 260
           GR +   GWTG+GFDVDGR
Sbjct: 241 GRGTGAPGWTGAGFDVDGR 255

[Close]
BLAST of CmoCh18G012330 vs. TAIR10
Match: AT5G51840.1 (AT5G51840.1 unknown protein)

HSP 1 Score: 259.6 bits (662), Expect = 2.0e-69
Identity = 160/260 (61.54%), Postives = 192/260 (73.85%), Query Frame = 1 

Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           M SDP L  EIG DGLAREAPVIAYTEKIIEE ++QLRKYI+ENY+KIRDVERE   L+M
Sbjct: 2   MASDPKLKAEIGADGLAREAPVIAYTEKIIEEEQVQLRKYIEENYTKIRDVEREFGNLSM 61

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           E+KLT+GPKKAA+E LRKKIE+STERIHAAKLKEE+A+KA+EAASKVV+DEEA KQ LC+
Sbjct: 62  ELKLTAGPKKAAMEHLRKKIEVSTERIHAAKLKEEEARKAFEAASKVVKDEEATKQSLCE 121

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLN LVQ+S+N+Q  RLEELKRR+EALN NR STS+ QV QE +T        V DS+  
Sbjct: 122 DLNSLVQQSSNTQYARLEELKRRLEALNPNRSSTSIQQV-QEPETKS------VVDSAPA 181

Query: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKPSS-ETEVRGKKKNQFHGRGKGIGAVP 240
           A + +T   K   +       G+        Q+P++ E E + KKK Q  GRG+GIG + 
Sbjct: 182 ANANQTHPGKPENN------HGNEEGGKEHGQRPATAEGESKAKKKPQNQGRGRGIGIMN 241

Query: 241 KGRSSADSGWTGSGFDVDGR 260
           KGR     GWTG+GFDVDGR
Sbjct: 242 KGRG----GWTGAGFDVDGR 244

[Close]
BLAST of CmoCh18G012330 vs. NCBI nr
Match: gi|778679425|ref|XP_011651127.1| (PREDICTED: uncharacterized protein LOC101210795 [Cucumis sativus])

HSP 1 Score: 391.0 bits (1003), Expect = 1.7e-105
Identity = 221/259 (85.33%), Postives = 231/259 (89.19%), Query Frame = 1 

Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           MGSDP LLP IGPDGLAREAPVIAYTEKIIEEG LQLRK IDEN SKIRDVERELA LTM
Sbjct: 1   MGSDPSLLPVIGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLTSGPKKAALELLRKKIEMSTER+ AAKLKEEQAKK WEAASKVVQ+EEA KQKLC+
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQEEEAAKQKLCE 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLNHLVQES+N QLTRLEELKRRMEALNS+RVSTSVS    +  TMG AQNSRV+DSSGV
Sbjct: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVS---HDVMTMGGAQNSRVSDSSGV 180

Query: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240
           AT+TE TGAK NE+   Q  S  APV+NGQNQKP SETE RGKKKNQFHGRGKGIGAVPK
Sbjct: 181 ATTTE-TGAKPNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPK 240

Query: 241 GRSSADSGWTGSGFDVDGR 260
           GRSSADSGWTGSGFDVDGR
Sbjct: 241 GRSSADSGWTGSGFDVDGR 255

[Close]
BLAST of CmoCh18G012330 vs. NCBI nr
Match: gi|700202191|gb|KGN57324.1| (hypothetical protein Csa_3G179140 [Cucumis sativus])

HSP 1 Score: 344.4 bits (882), Expect = 1.8e-91
Identity = 203/259 (78.38%), Postives = 213/259 (82.24%), Query Frame = 1 

Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           MGSDP LLP                   IIEEG LQLRK IDEN SKIRDVERELA LTM
Sbjct: 1   MGSDPSLLP-------------------IIEEGSLQLRKCIDENLSKIRDVERELANLTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLTSGPKKAALELLRKKIEMSTER+ AAKLKEEQAKK WEAASKVVQ+EEA KQKLC+
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQEEEAAKQKLCE 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLNHLVQES+N QLTRLEELKRRMEALNS+RVSTSVS    +  TMG AQNSRV+DSSGV
Sbjct: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVS---HDVMTMGGAQNSRVSDSSGV 180

Query: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240
           AT+TE TGAK NE+   Q  S  APV+NGQNQKP SETE RGKKKNQFHGRGKGIGAVPK
Sbjct: 181 ATTTE-TGAKPNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPK 236

Query: 241 GRSSADSGWTGSGFDVDGR 260
           GRSSADSGWTGSGFDVDGR
Sbjct: 241 GRSSADSGWTGSGFDVDGR 236

[Close]
BLAST of CmoCh18G012330 vs. NCBI nr
Match: gi|659077326|ref|XP_008439146.1| (PREDICTED: uncharacterized protein LOC103484029 [Cucumis melo])

HSP 1 Score: 325.1 bits (832), Expect = 1.1e-85
Identity = 188/233 (80.69%), Postives = 200/233 (85.84%), Query Frame = 1 

Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           MGSDP LLPEIGPDGLAREAPVIAYTEKIIEEG LQLRK IDEN SKIRDVERELA LTM
Sbjct: 1   MGSDPSLLPEIGPDGLAREAPVIAYTEKIIEEGSLQLRKCIDENLSKIRDVERELANLTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLTSGPKKAALELLRKKIEMSTER+ AAKLKEEQAKK WEAASKVVQDEEA KQKLC+
Sbjct: 61  EMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQDEEATKQKLCE 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLNHLVQES+N QLTRLEELKRRMEALNS+RVSTSVS    + + MG AQNSRV+DSS V
Sbjct: 121 DLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVS---HDVKAMGGAQNSRVSDSSAV 180

Query: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGK 234
           AT+TE TGAK NE+   Q  S  APV+NGQNQKP SETE RGK+K  F   G+
Sbjct: 181 ATTTE-TGAKTNENVPNQTTSDAAPVINGQNQKPPSETEGRGKRKTSFMEEGR 229

[Close]
BLAST of CmoCh18G012330 vs. NCBI nr
Match: gi|1009122530|ref|XP_015878050.1| (PREDICTED: uncharacterized protein LOC107414452 [Ziziphus jujuba])

HSP 1 Score: 314.7 bits (805), Expect = 1.5e-82
Identity = 181/256 (70.70%), Postives = 211/256 (82.42%), Query Frame = 1 

Query: 4   DPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTMEMK 63
           +P LLPEIGPDGL REAPVIAYTEKIIEE +LQL+KYI+ENYSKIRDVERELA LTME+K
Sbjct: 8   NPSLLPEIGPDGLPREAPVIAYTEKIIEEEQLQLKKYIEENYSKIRDVERELANLTMEVK 67

Query: 64  LTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCDDLN 123
           LT+GPKKAALE +RKKIEMSTERI  AKLKEEQAKKAWEAAS+VV+DEEA+KQKLC+DLN
Sbjct: 68  LTAGPKKAALEHMRKKIEMSTERIRLAKLKEEQAKKAWEAASQVVKDEEAMKQKLCEDLN 127

Query: 124 HLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGVATS 183
           +LVQES+NSQ +RLEELKRR+EALN  R STS   V  +G+++G A +  V D+S V  S
Sbjct: 128 NLVQESSNSQFSRLEELKRRLEALNPGRASTS---VLHDGKSIGPAHSITVPDASSVPHS 187

Query: 184 TETTGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPKGRS 243
            E  GA  NE+   +   G+ P +NG  Q+PS+E E +GKKK+QFHGRGKGIGAVPKGR 
Sbjct: 188 VEAGGA-VNENVPNKGNVGNTPGMNG--QQPSTEGEGKGKKKSQFHGRGKGIGAVPKGRG 247

Query: 244 SADSGWTGSGFDVDGR 260
           S   GWTG+GFDVDGR
Sbjct: 248 SQGPGWTGAGFDVDGR 257

[Close]
BLAST of CmoCh18G012330 vs. NCBI nr
Match: gi|590672185|ref|XP_007038538.1| (MRNA, cds, clone: RAFL24-31-B07, putative [Theobroma cacao])

HSP 1 Score: 314.3 bits (804), Expect = 2.0e-82
Identity = 177/259 (68.34%), Postives = 210/259 (81.08%), Query Frame = 1 

Query: 1   MGSDPFLLPEIGPDGLAREAPVIAYTEKIIEEGRLQLRKYIDENYSKIRDVERELAELTM 60
           M S+P L PEIGPDGLAREAPVIAYTEKIIEE +LQL+KYI+ENYSKIRDVEREL+ LTM
Sbjct: 1   MASNPALKPEIGPDGLAREAPVIAYTEKIIEEEQLQLKKYIEENYSKIRDVERELSNLTM 60

Query: 61  EMKLTSGPKKAALELLRKKIEMSTERIHAAKLKEEQAKKAWEAASKVVQDEEAIKQKLCD 120
           EMKLT+GPKKAALE LRKKIEMSTERIH AK KEEQA+K WEAA K + DEEAIKQKLC+
Sbjct: 61  EMKLTAGPKKAALEHLRKKIEMSTERIHIAKQKEEQARKTWEAAVKALNDEEAIKQKLCE 120

Query: 121 DLNHLVQESNNSQLTRLEELKRRMEALNSNRVSTSVSQVTQEGQTMGNAQNSRVADSSGV 180
           DLN+LVQES+NSQ  RLEELKRR+EALN +R ST       + + +G+AQ +   D+S V
Sbjct: 121 DLNNLVQESSNSQFARLEELKRRLEALNPSRASTLSH---HDRKAIGSAQGAATGDASSV 180

Query: 181 ATSTETTGAKANESARIQAVSGDAPVVNGQNQKPSSETEVRGKKKNQFHGRGKGIGAVPK 240
             +T+ +G+ A+E+   Q   G+   +NGQNQ P+++ EV+GKKK+QF GRGKGIGAVPK
Sbjct: 181 PQTTQ-SGSTASENVPNQRNDGNVLAMNGQNQLPTNDGEVKGKKKSQFQGRGKGIGAVPK 240

Query: 241 GRSSADSGWTGSGFDVDGR 260
           GR SA  GWTG+GFDVDGR
Sbjct: 241 GRGSAAPGWTGAGFDVDGR 255

The following BLAST results are available for this feature:
BLAST of CmoCh18G012330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh18G012330 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8J1_CUCSA1.2e-9178.38Uncharacterized protein OS=Cucumis sativus GN=Csa_3G179140 PE=4 SV=1[more]
A0A061G7M2_THECC1.4e-8268.34MRNA, cds, clone: RAFL24-31-B07, putative OS=Theobroma cacao GN=TCM_015047 PE=4 ... [more]
W9S9H6_9ROSA1.7e-8068.36Uncharacterized protein OS=Morus notabilis GN=L484_002797 PE=4 SV=1[more]
D7T1T6_VITVI4.6e-7865.25Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0022g02350 PE=4 SV=... [more]
A0A067F232_CITSI1.3e-7765.25Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025205mg PE=4 SV=1[more]
BLAST of CmoCh18G012330 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G51840.12.0e-6961.54 unknown protein[more]
BLAST of CmoCh18G012330 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778679425|ref|XP_011651127.1|1.7e-10585.33PREDICTED: uncharacterized protein LOC101210795 [Cucumis sativus][more]
gi|700202191|gb|KGN57324.1|1.8e-9178.38hypothetical protein Csa_3G179140 [Cucumis sativus][more]
gi|659077326|ref|XP_008439146.1|1.1e-8580.69PREDICTED: uncharacterized protein LOC103484029 [Cucumis melo][more]
gi|1009122530|ref|XP_015878050.1|1.5e-8270.70PREDICTED: uncharacterized protein LOC107414452 [Ziziphus jujuba][more]
gi|590672185|ref|XP_007038538.1|2.0e-8268.34MRNA, cds, clone: RAFL24-31-B07, putative [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh18G012330.1CmoCh18G012330.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 41..61
score: -coord: 130..157
score: -coord: 73..93
scor
NoneNo IPR availablePANTHERPTHR35315FAMILY NOT NAMEDcoord: 1..260
score: 7.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh18G012330Cucsa.251160Cucumber (Gy14) v1cgycmoB0709
CmoCh18G012330CmaCh16G001600Cucurbita maxima (Rimu)cmacmoB327
CmoCh18G012330CmaCh18G012110Cucurbita maxima (Rimu)cmacmoB406
CmoCh18G012330Cla006224Watermelon (97103) v1cmowmB366
CmoCh18G012330Csa3G179140Cucumber (Chinese Long) v2cmocuB398
CmoCh18G012330MELO3C006858Melon (DHL92) v3.5.1cmomeB368
CmoCh18G012330ClCG05G007690Watermelon (Charleston Gray)cmowcgB359
CmoCh18G012330CSPI03G16430Wild cucumber (PI 183967)cmocpiB401
CmoCh18G012330Lsi05G012790Bottle gourd (USVL1VR-Ls)cmolsiB372
CmoCh18G012330Cp4.1LG09g01260Cucurbita pepo (Zucchini)cmocpeB376
CmoCh18G012330MELO3C006858.2Melon (DHL92) v3.6.1cmomedB421
CmoCh18G012330CsaV3_3G016630Cucumber (Chinese Long) v3cmocucB0476
CmoCh18G012330Cla97C05G089600Watermelon (97103) v2cmowmbB404
CmoCh18G012330Bhi01G001018Wax gourdcmowgoB0506
CmoCh18G012330CsGy3G016540Cucumber (Gy14) v2cgybcmoB324
CmoCh18G012330Carg26805Silver-seed gourdcarcmoB0011
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh18G012330Cucurbita moschata (Rifu)cmocmoB242
CmoCh18G012330Cucurbita moschata (Rifu)cmocmoB275
CmoCh18G012330Cucurbita moschata (Rifu)cmocmoB333
CmoCh18G012330Cucurbita maxima (Rimu)cmacmoB591
CmoCh18G012330Wild cucumber (PI 183967)cmocpiB416
CmoCh18G012330Cucumber (Chinese Long) v2cmocuB411
CmoCh18G012330Melon (DHL92) v3.5.1cmomeB343
CmoCh18G012330Watermelon (Charleston Gray)cmowcgB348
CmoCh18G012330Cucurbita pepo (Zucchini)cmocpeB386
CmoCh18G012330Cucurbita pepo (Zucchini)cmocpeB414
CmoCh18G012330Bottle gourd (USVL1VR-Ls)cmolsiB353
CmoCh18G012330Cucumber (Gy14) v2cgybcmoB606
CmoCh18G012330Melon (DHL92) v3.6.1cmomedB392
CmoCh18G012330Silver-seed gourdcarcmoB0968
CmoCh18G012330Silver-seed gourdcarcmoB1176
CmoCh18G012330Silver-seed gourdcarcmoB1234
CmoCh18G012330Silver-seed gourdcarcmoB1253
CmoCh18G012330Cucumber (Chinese Long) v3cmocucB0491
CmoCh18G012330Watermelon (97103) v2cmowmbB387