Cucsa.251160 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGCTCTAGTATTCAATTAATGGTACCAGAGGAAATCCTGATGGAACCATCCCGGCTTAGTTAAGTTTACTTTTTCCTTGAAGTACAAGTTTGAGCCTTCAATTTATGGAGAGGAACCCCGCCTATCTTCTGAGCTAATAGGATCAGTCTTTATCTTTGAAAATGATACCACATTAGAATCGACATTTGGACCTGTTGTGTTAATTACTCCAAGCATGAAATTAGTGAAATGAAGTTGATTATCCTTCATCAAGGTTTTTTATTTTCCCTTTTTACCTATTTCCTTAAACTTGAAATGTTCTTCATGGCCTGGCTTGTTATTTTGTCTAGATGTATTGATGAAAATTTATCTAAAATTCGGGATGTTGAACGGGAATTGGCAAATCTTACAATGGAGATGAAACTCACATCTGGGCCTAAAAAAGCAGGTTGAGCTCACTCTCAGTTGTTTTATTTTGATTAGTGATTTTCTTGAAATAGTTGACTCACCACCAACTGTGGTTGCATATCTCTAGCTCTTGAACTTTTGCGGAAGAAAATAGAAATGTCAACTGAGAGAGTACGTGCAGCTAAGTTGAAGGAAGAACAAGCAAAGAAGGTTTGCCCCTTGTTAAATCTTTTTATTGTATAACTTTGACTTGAAGCTTGCTGTTTGGCATGTCACTTTGTGCCTGCTCCACAAGTTGCACAGTTCTTTGTGATGTTTTGAACCTAGAATTTAGAGGAAGACAAAATATGAAGAATCTATTCAACAGATTTGTTCTGGTCTTGCCAAACCATTCTCCCCTATTTTTGGCCATGTCTATGCATTTTCTCATTTAGATGTTTGAAGAAGATGCTGATAGCATTGTTCCAAAAAAAAAAAGAAAAAGAAAATTGATAGATAAGTTCTGTGAGCGTATAATCTCATGGTTGCCATTTCCTTCTTCTTCTTACTGCATTTCACTCAAGCTATTACATCCTTTCTCTGGGATGTTCACAAAATGGAAGGGTTGTAAACCAATTGCTTCTAAATTTATTGCATGTGTTCAACATTGTACATTCATTTGGGCTTGCATCTTAAGATTGTTAACTGCTATTCCAGGAATCTTATATTATGTTTTTCCTTCAGGTTTGGGAAGCAGCATCAAAGGTAGTGCAAGAAGAGGAAGCAGCTAAGCAAAAATTGTGTGAAGACTTGAATCATCTGGTACATATCTCAGCATTGCTTTTGCTTGTGCCAAACTTATACAATTGCTTGATAACATCATTGTTCCTTCTCCAAAGGTTCAAGAAAGCAGTAACTTCCAGTTGACAAGACTTGAAGAACTAAAAAGGCGCATGGAAGCGTTGAATTCAAGTCGAGTATCAACCTCTGTTTCTCATGTAAGTCTTGCATTACATTGCATATGATGTCTCTAATTCAAATCACAACTATAGTGGCTTCTGCTGGTTAGCCATTAACTTAGCCCAATTGAAATACGATGTAATATGTATGCCTTTTGGGTTGCACAGGATGTCATGACAATGGGAGGTGCTCAGAATAGCAGAGTGTCAGATTCTTCTGGAGTTGCTACAACAACAGAAACTGGTGCAAAACCAAATGAAAATGTCCCCAATCAAACAACCAGTGATGCAGCTCCAGTGATAAATGGGCAAAATCAAAAGCCCCCTTCTGAGACAGAAGGAAGAGGAAAAAAGAAAAATCAGTTTCATGGAAGAGGGAAGGGAATTGGAGCAGTGCCTAAAGGAAGAAGCTCTGCAGACTCTGGCTGGACTGGGTCTGGATTTGATGTGGATGGTAGAGCATGAGCTTAAGCACTACAAAAATCAAGATCCAAATTGTCAATATCAATATAAAAAATGGTTCTTTTATTTGAAAAAAAATAGTACTAAGTGTTATTTTTTCTCCATGTTCACTTTCAGGCCTCAGATGATGGAGTTGTGAGAATATATATTTGACTGGAATAGAAACTATAGATTTAGCCCCGAGTTCTTTGGTATTTCCATTTGGCTCGACTTGCTTTAAAAATTTCTGTGTTGTCACTAACTGCTCTGTTAAGTCGATTCGTTTATTGATGGTGA TTGCTCTAGTATTCAATTAATGGTACCAGAGGAAATCCTGATGGAACCATCCCGGCTTAGTTAAGTTTACTTTTTCCTTGAAGTACAAGTTTGAGCCTTCAATTTATGGAGAGGAACCCCGCCTATCTTCTGAGCTAATAGGATCAGTCTTTATCTTTGAAAATGATACCACATTAGAATCGACATTTGGACCTGTTGTGTTAATTACTCCAAGCATGAAATTAGTGAAATGAAGTTGATTATCCTTCATCAAGGTTTTTTATTTTCCCTTTTTACCTATTTCCTTAAACTTGAAATGTTCTTCATGGCCTGGCTTGTTATTTTGTCTAGATGTATTGATGAAAATTTATCTAAAATTCGGGATGTTGAACGGGAATTGGCAAATCTTACAATGGAGATGAAACTCACATCTGGGCCTAAAAAAGCAGCTCTTGAACTTTTGCGGAAGAAAATAGAAATGTCAACTGAGAGAGTACGTGCAGCTAAGTTGAAGGAAGAACAAGCAAAGAAGGTTTGGGAAGCAGCATCAAAGGTAGTGCAAGAAGAGGAAGCAGCTAAGCAAAAATTGTGTGAAGACTTGAATCATCTGGTTCAAGAAAGCAGTAACTTCCAGTTGACAAGACTTGAAGAACTAAAAAGGCGCATGGAAGCGTTGAATTCAAGTCGAGTATCAACCTCTGTTTCTCATGATGTCATGACAATGGGAGGTGCTCAGAATAGCAGAGTGTCAGATTCTTCTGGAGTTGCTACAACAACAGAAACTGGTGCAAAACCAAATGAAAATGTCCCCAATCAAACAACCAGTGATGCAGCTCCAGTGATAAATGGGCAAAATCAAAAGCCCCCTTCTGAGACAGAAGGAAGAGGAAAAAAGAAAAATCAGTTTCATGGAAGAGGGAAGGGAATTGGAGCAGTGCCTAAAGGAAGAAGCTCTGCAGACTCTGGCTGGACTGGGTCTGGATTTGATGTGGATGGTAGAGCATGAGCTTAAGCACTACAAAAATCAAGATCCAAATTGTCAATATCAATATAAAAAATGGTTCTTTTATTTGAAAAAAAATAGTACTAAGTGTTATTTTTTCTCCATGTTCACTTTCAGGCCTCAGATGATGGAGTTGTGAGAATATATATTTGACTGGAATAGAAACTATAGATTTAGCCCCGAGTTCTTTGGTATTTCCATTTGGCTCGACTTGCTTTAAAAATTTCTGTGTTGTCACTAACTGCTCTGTTAAGTCGATTCGTTTATTGATGGTGA ATGAAGTTGATTATCCTTCATCAAGGTTTTTTATTTTCCCTTTTTACCTATTTCCTTAAACTTGAAATGTTCTTCATGGCCTGGCTTGTTATTTTGTCTAGATGTATTGATGAAAATTTATCTAAAATTCGGGATGTTGAACGGGAATTGGCAAATCTTACAATGGAGATGAAACTCACATCTGGGCCTAAAAAAGCAGCTCTTGAACTTTTGCGGAAGAAAATAGAAATGTCAACTGAGAGAGTACGTGCAGCTAAGTTGAAGGAAGAACAAGCAAAGAAGGTTTGGGAAGCAGCATCAAAGGTAGTGCAAGAAGAGGAAGCAGCTAAGCAAAAATTGTGTGAAGACTTGAATCATCTGGTTCAAGAAAGCAGTAACTTCCAGTTGACAAGACTTGAAGAACTAAAAAGGCGCATGGAAGCGTTGAATTCAAGTCGAGTATCAACCTCTGTTTCTCATGATGTCATGACAATGGGAGGTGCTCAGAATAGCAGAGTGTCAGATTCTTCTGGAGTTGCTACAACAACAGAAACTGGTGCAAAACCAAATGAAAATGTCCCCAATCAAACAACCAGTGATGCAGCTCCAGTGATAAATGGGCAAAATCAAAAGCCCCCTTCTGAGACAGAAGGAAGAGGAAAAAAGAAAAATCAGTTTCATGGAAGAGGGAAGGGAATTGGAGCAGTGCCTAAAGGAAGAAGCTCTGCAGACTCTGGCTGGACTGGGTCTGGATTTGATGTGGATGGTAGAGCATGA MKLIILHQGFLFSLFTYFLKLEMFFMAWLVILSRCIDENLSKIRDVERELANLTMEMKLTSGPKKAALELLRKKIEMSTERVRAAKLKEEQAKKVWEAASKVVQEEEAAKQKLCEDLNHLVQESSNFQLTRLEELKRRMEALNSSRVSTSVSHDVMTMGGAQNSRVSDSSGVATTTETGAKPNENVPNQTTSDAAPVINGQNQKPPSETEGRGKKKNQFHGRGKGIGAVPKGRSSADSGWTGSGFDVDGRA*
BLAST of Cucsa.251160 vs. TrEMBL
Match: A0A0A0L8J1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G179140 PE=4 SV=1) HSP 1 Score: 452.2 bits (1162), Expect = 4.2e-124 Identity = 237/256 (92.58%), Postives = 237/256 (92.58%), Query Frame = 1
BLAST of Cucsa.251160 vs. TrEMBL
Match: A0A061G7M2_THECC (MRNA, cds, clone: RAFL24-31-B07, putative OS=Theobroma cacao GN=TCM_015047 PE=4 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 5.5e-92 Identity = 177/255 (69.41%), Postives = 202/255 (79.22%), Query Frame = 1
BLAST of Cucsa.251160 vs. TrEMBL
Match: W9S9H6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002797 PE=4 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 1.7e-88 Identity = 174/253 (68.77%), Postives = 195/253 (77.08%), Query Frame = 1
BLAST of Cucsa.251160 vs. TrEMBL
Match: D7T1T6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0022g02350 PE=4 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 7.0e-87 Identity = 170/255 (66.67%), Postives = 195/255 (76.47%), Query Frame = 1
BLAST of Cucsa.251160 vs. TrEMBL
Match: B9R9J3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1497870 PE=4 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 1.6e-86 Identity = 172/256 (67.19%), Postives = 199/256 (77.73%), Query Frame = 1
BLAST of Cucsa.251160 vs. TAIR10
Match: AT5G51840.1 (AT5G51840.1 unknown protein) HSP 1 Score: 267.3 bits (682), Expect = 9.7e-72 Identity = 152/257 (59.14%), Postives = 181/257 (70.43%), Query Frame = 1
BLAST of Cucsa.251160 vs. NCBI nr
Match: gi|778679425|ref|XP_011651127.1| (PREDICTED: uncharacterized protein LOC101210795 [Cucumis sativus]) HSP 1 Score: 500.7 bits (1288), Expect = 1.5e-138 Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 1
BLAST of Cucsa.251160 vs. NCBI nr
Match: gi|700202191|gb|KGN57324.1| (hypothetical protein Csa_3G179140 [Cucumis sativus]) HSP 1 Score: 452.2 bits (1162), Expect = 6.0e-124 Identity = 237/256 (92.58%), Postives = 237/256 (92.58%), Query Frame = 1
BLAST of Cucsa.251160 vs. NCBI nr
Match: gi|659077326|ref|XP_008439146.1| (PREDICTED: uncharacterized protein LOC103484029 [Cucumis melo]) HSP 1 Score: 415.2 bits (1066), Expect = 8.1e-113 Identity = 215/229 (93.89%), Postives = 218/229 (95.20%), Query Frame = 1
BLAST of Cucsa.251160 vs. NCBI nr
Match: gi|1009122530|ref|XP_015878050.1| (PREDICTED: uncharacterized protein LOC107414452 [Ziziphus jujuba]) HSP 1 Score: 349.0 bits (894), Expect = 7.2e-93 Identity = 181/252 (71.83%), Postives = 206/252 (81.75%), Query Frame = 1
BLAST of Cucsa.251160 vs. NCBI nr
Match: gi|590672185|ref|XP_007038538.1| (MRNA, cds, clone: RAFL24-31-B07, putative [Theobroma cacao]) HSP 1 Score: 345.5 bits (885), Expect = 7.9e-92 Identity = 177/255 (69.41%), Postives = 202/255 (79.22%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |