CmoCh18G006730 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh18G006730
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Senescence regulator
Location	Cmo_Chr18 : 8576324 .. 8580793 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCTCACCCCTCCTTCCTCCCGTTTCCGCCACCGGAAATCCCCCTCCTCCGAGCGCTTCCTTCTCTCCTTCTCTTCTCCCTCCCCCCGACCTTCTAACCCTACCTCCGCCAACGCCCTCGACAACGACGACAACAACAGCGAGCTCAACGAGGACGACGTCTTCTGGACTGGCGATTTCGCCGCCGATTCCGCCCACCATACCCACTCCACTCCCTCCTCCTCCTCCTCCTCCACTCCTCGCCACCATATTCATCACCTCCAGCATCACAAGGGCTTCCCCCAGTCTGAGACCTTCGGTATTCTCGCTGCCCTCCCTGAGAACGAGGCCTCCTCCAGCCTTCGCAACTCCTCGTATTTCTACCACAAGGCCTCCGTCTCCTCCTCCTCTTCCTCTTCCCCTTCCTCTTCTCGGATGATTCCGACTATCCCTAAACCTCCTCTCGAGCGGTTGCCCTTGCCGATTTCTTCATCGTTGAAGTACCAGTCCGCTCCGGTCAATGTGCCAATGATGTCCAAGGCGGCGGTTCAGAGACACCAAGAGATAGATGTGGATGATGTTGATGAAAGTGATGGGGAGATGTTGCCGCCTCATGAAATTGTCGCCAGAAGTTTGGCTCAATCGCCATTGTTGTCTTGCTCGGTACTCGAGGGTGCGGGAAGGACGTTAAAGGGCAGGGATCTTCGCCAGGTTCGAAATGCTGTTTGGAGACGAACAGGTTTTCTTGATTAGGGATTTGAACTGCTTTAATTACTTTTGGAGAATTGATTTGCTTAGTTCTTCGTCGTTTGACAATATTCGCCAGTCTGCGAGTGTCTGGTTCACTTTGACGACTGTTTGTGTCGCTCTTTTTGGAGTATTGAGGGTCCAGGAATATTTGAATCTGCTTGACACTCATCGTAAGAAGGAATTGGAATTGGAATTGGAATTGGAATTGGAATTGTAATTATCTGAAGGGTGTTTAAGATTTTACTTTGAAGTTTATTTGTAGGTTTGATCATTATCTAAGAACATTTTTCCAATCTATTCATATTAAATTCCCGTAATGTTGTTACATTTGCACCTACTTTTTCAGTTTAAAGTGTTCATATTTGTTCTCTTCCCTTCCATTACACTAGTTCATCCGGAGTTGGTTATTCTACATAGAACTATTTGGTACAAGCCTTGCAAAGAACAATAAACTTCGGTAAAAGAAGTCCCAAATGGAGTGCGTTTAATTTGCTTCATTGTTTCCTTTATCCACTAAAATAGAGGATTTTACCATCCTGTTTATAATTGAGAGCTCAATTATGCTAAACGAAGTTATTAATATGAACACTAGTTGAAACTTTACCAAATTCCTTGGACGAACGCTCGAAATGTGTTTCATGTTTTATACATGGTGTTGAGAGGTGTTTGTTTCTGGTTAGTATTGAGCTTTCGATACCTCTGCAGGAGTGTGATAGTCTTGTGTTTTCTTTATCTGAATGCTGACTAGTTGTGAGTGATTAGATGTGTTATTTATGAAGGGTTCTTGCAGTGATAATTATAACCTTGATGAAATTTAGCCCTACATGTCTGTTCATTGGGGTTTGTAGCACAGGGACCAGAATTATTCGTTTCTGTTCAATGCTATTCCTCAGTTTCTGCATTGGGAGACACATCCTCTTGAGTTTATTTCTATTCTTCTTTTCTTTCCTTTTCTGAGATCAGTGATGCTTAATGTCACATATGAAAGGCCTATATTGAACTTAAGACAGAGTACCTACCGATGCGATGTAGGGAGAGGGAGTAAAGAGGGGAATAATTGGAGAGGAGAGTGAAGGAACATGAGCGAAGAGGGTGAAGGAAGTATGAATGCTGAGAATAAAGAGAAAAATGGTCGAAAGGGAAAAATGGTGAGGAGAGTGAAGGAACATATAATTGGAGAGGAGAGCGAAGGAACATGAGCAATCCATAAAGATCTAGTGAAAATCAAATAACATACAAGGGAAAAGTGGTCGAAACGAATGCTGAGAATCACGGTATATGCTATGAAACTATTTTCAATTCAATTTTTTTTATTATTTACTAGAAAGAATACTAGATCAAATGGTGCTCCAAAATAAGTTCCTGGGTAATCATCTCGATAAGCCGCTACATTAGCGGCGCATAAACTATGTTTGTCAACCAAGTTTGTTCAGTGGTCGTAACGTAATTTATTGGTTAGTGGGGATAAACCGGGCCGGGATTCAAAAGAATTGGGCAAACTGTTTGCTCCCGAACGACAGAAGTGGAAAGACACTAAGGGAGAGGGAGATACTCTTTGATTTTTGTAATCGCCGAAATTGTACGGTTCCAGGCGTACGATCTGATACCATTCTGTGATTCTCTTCCTCAAATGAACATCAAGTTACTTTTTATTATGTTTTCGTTACGTTATCCTGTTTTGGTATGCAGGAAGTTGAGGGAACTAGAGTAGGCTAGGTATGGCTTCCTGTTATCGAACCTATGAAACTTGAATGCTTTTCATTTGGTAGGTGCATTGACTAAAGGTAACAATCTGCATGGATAGAGTAGGATTTGATTGATATATATTCAGTTGTTCTATTAGAATTTTCCACTCTTTTCAGTTTATAAATTTCTTGATAGATCCTTTATAGTGGTAATGTTGCATGACCTACGGAAGTAATTTGTTTGCTTTTTCAGTGTCTTCAGTAAACACTTAGTTGAACTGTTTTCCATGAGATAGGAACTTGATGCAGCGGATTTAACTAGGAAATTCATCCCGAGAACGAAGAAGAAATCCCTCAAATTTGAGAGTAAACTCTTAAGAAACTCTATTGAATAATATGATCAACAGCAAACTATTACAATTCCAAGAGGGGGAATAATCAAATATACTATTATCCCACATCATTTGCCCCAACTTTGAAAAAGAATTCAGTGTTTCGCATCAAAGGTGCTATGAGTCTGTTCTATCTCGACTGAGTTCAATATCATTCTGGGGATGGATTTTCCACCTACTATTGCCCTTAATGTCACCTGCTGCACCTAACTTGTGAATGGAGTACACCTCATTTGAGATTTATTTGTTTGTATCTTAATTATATTCTTATAGATTTGTTATAGGCCGTGTGATAGCTTGACTTTCTTCAAAAAGGAGGCCACTCATCTCTATGATTTCTGGACAGTTATGTTCTTCTTTGTCTCCATCGTCTTGTCCTGTTCTCCATTTCCTTTTTTTTTTCTCCTGTCGTGTATTATTGCTTTTGTCATATTTTGGTTGCTGGAAATTGTGATGAAAGAGAAGTTAATATGCTCGTTTCTTCAACCCTGGCTCCACCATCGTGTTCACGGAAGATTGAAATATCTATCCAATACTGTGTAGACAGACAACTTTCCTTCTCTATGAAGCAGCAGTTACTTCAGAATGACAGTTACAGGTATTTGCAGGCTAGCTGCAAATGATGATACTATATATGCTATTGTAGTATTTCCTAGATCATTTTATCACTGCATGCGAACTATACGTTATTCCTGTATTGACATCCATGAATACCATTCAACAACCTACAAGTTTTTTTTTATAACTTTTTTGTACCTTTCTTGACAAGATTTAAACACATTTTTTAAAGATATATTGATTCAGCTACTAATTTGTAGGTGTATATGGTGAATATTTGAATGACTGTTGCCTGCATCTCGCAGATATTTCTTAACAGATTTACAATCTTCAGCACAGGACTCCAAAGGAGGAGAATCATTTTGTTTGTTAATATTCTTAATAGATTCCACTGGAAGCACGGGAAGAAAGAGGATCGTTATTGTTTGTCGATGTTTTTTGCATCTGAGAAGCGACACTATCAAATTCAGGTTCTTTCTGAATTATGGCTATATGAATCTTGACGTGTTTGTTTCTGGACCTCTAATATAATCAAATCTTCTGATTGTCCCTCTAAAAGACATGAAGTTTGGCTGAAAATTTAGCAGGGGTAATGGCTGTCCTGTCCTGTCTCAGCTCCCTCATTTTCACCATTAATACCCTTTTCTTGCCAAGTCTTAAAGAGAAACAAGTTCAGTTGTTTTGATGAGGCAGGATGTGTACTATTTTATATTGCAATTCACGTATCTCCCTCTTTAGGAATAAGGTAATAAATTGTCTTTTAGACTATAGATACGTTGGGCTGCTAACGGTATTGTCAAATGTAGTGTTAATAGGATCGGTTTTGATGAGGCAGGATGTGTACCGTATCTCCTTCTTCCTTCTTCAGGAATAAGGTAATAAATCATCTTTTGGTATTGTCAAATGTAGTGTTAATAGGATCGGTTTTGATGAGGCAGGATGTGTACTATTTTATTTTGCATTTCACGTATCTCCCTCTTCAGGAATAAGGTAATAAATCGTCTTTTGATATTGTCAATTGTAATGTTAATAGGATCTGTTTTGATGAGCTAGATGCGTACTTTTTTATTTTGCATTTCACGCGTCTCCCTCTTTAGGAATAA

mRNA sequence

ATGGACCTCACCCCTCCTTCCTCCCGTTTCCGCCACCGGAAATCCCCCTCCTCCGAGCGCTTCCTTCTCTCCTTCTCTTCTCCCTCCCCCCGACCTTCTAACCCTACCTCCGCCAACGCCCTCGACAACGACGACAACAACAGCGAGCTCAACGAGGACGACGTCTTCTGGACTGGCGATTTCGCCGCCGATTCCGCCCACCATACCCACTCCACTCCCTCCTCCTCCTCCTCCTCCACTCCTCGCCACCATATTCATCACCTCCAGCATCACAAGGGCTTCCCCCAGTCTGAGACCTTCGGTATTCTCGCTGCCCTCCCTGAGAACGAGGCCTCCTCCAGCCTTCGCAACTCCTCGTATTTCTACCACAAGGCCTCCGTCTCCTCCTCCTCTTCCTCTTCCCCTTCCTCTTCTCGGATGATTCCGACTATCCCTAAACCTCCTCTCGAGCGGTTGCCCTTGCCGATTTCTTCATCGTTGAAGTACCAGTCCGCTCCGGTCAATGTGCCAATGATGTCCAAGGCGGCGGTTCAGAGACACCAAGAGATAGATGTGGATGATGTTGATGAAAGTGATGGGGAGATGTTGCCGCCTCATGAAATTGTCGCCAGAAGTTTGGCTCAATCGCCATTGTTGTCTTGCTCGGTACTCGAGGGTGCGGGAAGGACGTTAAAGGGCAGGGATCTTCGCCAGGTTCGAAATGCTGTTTGGAGACGAACAGACAGACAACTTTCCTTCTCTATGAAGCAGCAGTTACTTCAGAATGACAGTTACAGATTCCACTGGAAGCACGGGAAGAAAGAGGATCGTTATTGTTTGTCGATGTTTTTTGCATCTGAGAAGCGACACTATCAAATTCAGGAATAA

Coding sequence (CDS)

ATGGACCTCACCCCTCCTTCCTCCCGTTTCCGCCACCGGAAATCCCCCTCCTCCGAGCGCTTCCTTCTCTCCTTCTCTTCTCCCTCCCCCCGACCTTCTAACCCTACCTCCGCCAACGCCCTCGACAACGACGACAACAACAGCGAGCTCAACGAGGACGACGTCTTCTGGACTGGCGATTTCGCCGCCGATTCCGCCCACCATACCCACTCCACTCCCTCCTCCTCCTCCTCCTCCACTCCTCGCCACCATATTCATCACCTCCAGCATCACAAGGGCTTCCCCCAGTCTGAGACCTTCGGTATTCTCGCTGCCCTCCCTGAGAACGAGGCCTCCTCCAGCCTTCGCAACTCCTCGTATTTCTACCACAAGGCCTCCGTCTCCTCCTCCTCTTCCTCTTCCCCTTCCTCTTCTCGGATGATTCCGACTATCCCTAAACCTCCTCTCGAGCGGTTGCCCTTGCCGATTTCTTCATCGTTGAAGTACCAGTCCGCTCCGGTCAATGTGCCAATGATGTCCAAGGCGGCGGTTCAGAGACACCAAGAGATAGATGTGGATGATGTTGATGAAAGTGATGGGGAGATGTTGCCGCCTCATGAAATTGTCGCCAGAAGTTTGGCTCAATCGCCATTGTTGTCTTGCTCGGTACTCGAGGGTGCGGGAAGGACGTTAAAGGGCAGGGATCTTCGCCAGGTTCGAAATGCTGTTTGGAGACGAACAGACAGACAACTTTCCTTCTCTATGAAGCAGCAGTTACTTCAGAATGACAGTTACAGATTCCACTGGAAGCACGGGAAGAAAGAGGATCGTTATTGTTTGTCGATGTTTTTTGCATCTGAGAAGCGACACTATCAAATTCAGGAATAA

Homology

[Close]

BLAST of CmoCh18G006730 vs. TrEMBL
Match: A0A0A0LT40_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G165750 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 1.2e-106
Identity = 210/240 (87.50%), Postives = 220/240 (91.67%), Query Frame = 1


Query: 1   MDLTPPSSRFRHRKSPSSERFLLSFSSPSPRPSNPTSANALDNDDNNSELNEDDVFWTGD 60
           MDL  PSSRFRHR SPSSERFL SF SP  R SNP+S  ALD+D   SELNEDDVFWTGD
Sbjct: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDD---SELNEDDVFWTGD 60

Query: 61  FAADSAHHTHSTPSSSSSSTPRHHIHHLQHHKGFPQSETFGILAALPENEASSSLRNSSY 120
           FA+DS HH+HSTPSSSSSSTPRHHIHHLQHHKGFP  ETFGILAALPENEASSSLRNSS+
Sbjct: 61  FASDSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSH 120

Query: 121 FYHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLPISSSLKYQSAPVNVPMMSKAAVQRH 180
           FYHKASVSSSSSSSPSSSRMIPTIPKPPL+RLPLPIS+SLKYQSAPVNVP+MSKA VQR 
Sbjct: 121 FYHKASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQ 180

Query: 181 QEIDVDDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 240
            E+DVDDVDE DGEMLPPHEIVARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRRT
Sbjct: 181 LEVDVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 237

[Close]

BLAST of CmoCh18G006730 vs. TrEMBL
Match: W9RQ25_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016293 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 5.5e-56
Identity = 149/253 (58.89%), Postives = 188/253 (74.31%), Query Frame = 1


Query: 1   MDLTPPSSRFRHRKSPSSERFLLSFSSPSPRPSNPTSANALDNDDNNSELNEDDVFWTGD 60
           MD+T    R RH++S S++RFL +FS   P  + P++++A  +     ELNEDD+FWTGD
Sbjct: 1   MDIT----RIRHKQSTSTDRFLRAFSHSPPDTAGPSTSSAAGD-----ELNEDDIFWTGD 60

Query: 61  FAADSAHH-----THSTPSSSSSSTPR--HHIHHLQHHKG-FPQSETFGILAALPENEAS 120
             A+S  H      +  PSS SS+  R  +H + + H KG F   E FGILAALPENE S
Sbjct: 61  SVAESPRHDGNGQNNHIPSSPSSTASRVNNHSNRIAHSKGGFAPPEGFGILAALPENETS 120

Query: 121 S-SLRNSSYFYHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLPISSSLKY-QSAPVNVP 180
           S +LR+ S+F+ KASVSSSSSSSP+SSR+IP IPKPP +R+  PI+SS+KY QSAPVNVP
Sbjct: 121 SPNLRDLSHFFVKASVSSSSSSSPTSSRLIPVIPKPPQDRI-TPINSSVKYHQSAPVNVP 180

Query: 181 MMSKAAVQRHQEI--DVD-DVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGR 240
           M+S+ A++R ++   +VD D D+ D EMLPPHEIVARSLA SPLLSCSVLEGAGRTLKGR
Sbjct: 181 MLSE-AMRRPRDFFAEVDADADDGDAEMLPPHEIVARSLAHSPLLSCSVLEGAGRTLKGR 240

[Close]

BLAST of CmoCh18G006730 vs. TrEMBL
Match: M5WPD6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011154mg PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.3e-54
Identity = 142/241 (58.92%), Postives = 171/241 (70.95%), Query Frame = 1


Query: 5   PPSSRFRHRKSPS-SERFLLSFSSPSPRPSNPTSANALDNDDNNSELNEDDVFWTGDFAA 64
           P  +R R +KS + SERFL ++  P   P+NP+ A ++ +     ELNEDDVFW+ D AA
Sbjct: 4   PNPTRLRPKKSTTPSERFLGAY--PHALPNNPSPATSIGD-----ELNEDDVFWSNDVAA 63

Query: 65  DSAHHTHSTPSSSSSSTPRHHIHHLQHH--KGFPQSETFGILAALPENEASSSL-RNSSY 124
           +  HH  STPSSS+SSTPRHH HH  HH  KGF Q E+FGILAALPE E SSS  R  S+
Sbjct: 64  EPIHH--STPSSSTSSTPRHHSHHHHHHHHKGFSQPESFGILAALPEREPSSSNHRPHSH 123

Query: 125 FYHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLPISSSLKY-QSAPVNVPMMSKAAVQR 184
           FYHK+SVSSS+SSSPS  ++IP IPKPP +R   P  SS+KY QSAP+NVP         
Sbjct: 124 FYHKSSVSSSASSSPS--QLIPAIPKPPHDRFHHPPLSSVKYHQSAPLNVP--------- 183

Query: 185 HQEIDVDDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRR 241
                  D DE +GEMLPPHEIVARS + +P+L+CSVLEG GRTLKGRDLR+VRNAVWR+
Sbjct: 184 -------DDDEGEGEMLPPHEIVARSSSHTPMLACSVLEGVGRTLKGRDLRRVRNAVWRQ 217

[Close]

BLAST of CmoCh18G006730 vs. TrEMBL
Match: A0A067KQ46_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12706 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 7.4e-53
Identity = 145/243 (59.67%), Postives = 177/243 (72.84%), Query Frame = 1


Query: 7   SSRFRHRKSPSSERFLLSFSSPSPRPSNPTSANALDNDDNNSELNEDDVFWTGDFAADSA 66
           S+RFRHRK+ SS+RFL +F  P     NP +  A +N+DN  ELNEDD+F TGDF+  S 
Sbjct: 6   SARFRHRKTASSDRFLGAF--PRALQDNPATT-AANNEDN--ELNEDDIFSTGDFSEASN 65

Query: 67  HHTHSTPSSSSSSTPRHHIHHLQHHKG-FPQSETFGILAALPENEASSSLRNSSYFYHKA 126
           HH +S PSS+SS  PRHH  H   HKG F Q E+FGILAALPE++++S      + Y K 
Sbjct: 66  HH-NSPPSSTSS--PRHHPLHTHSHKGAFAQPESFGILAALPEHKSNSH----HHLYQKT 125

Query: 127 SVSS--SSSSSPSSSRMIPTIPKPPLERLPLPIS-SSLKY---QSAPVNVPMMSKAAVQR 186
           ++SS  SSSS+ S SR IP++PKPP +RLP+  S +S K+   QSAPVNVP++S A  +R
Sbjct: 126 TISSPTSSSSTTSPSRFIPSVPKPPQDRLPISTSFNSSKFHQPQSAPVNVPVLSMAMRRR 185

Query: 187 HQEIDVDDV--DESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVW 241
           H+E D  D   DE DGEMLPPHEIVAR  AQSP+L+CSVLEG GRTLKGRDLRQVRNAVW
Sbjct: 186 HKEFDEIDENEDEGDGEMLPPHEIVAR--AQSPMLACSVLEGVGRTLKGRDLRQVRNAVW 234

[Close]

BLAST of CmoCh18G006730 vs. TrEMBL
Match: I1LTX0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G185900 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 8.8e-46
Identity = 142/254 (55.91%), Postives = 171/254 (67.32%), Query Frame = 1


Query: 1   MDLTPPSSRFRHRKSP---SSERFLLSFSSPSPRPSNPTSANALDNDDNNSELNEDDVFW 60
           MDL  P+ RFR+RK P   S ERFL    S +PR  NP+S + + +  NN +L EDDV +
Sbjct: 1   MDLLDPN-RFRNRKQPTLSSRERFL-GVPSHAPRLENPSSDDVVFS--NNDDLIEDDVVF 60

Query: 61  TGDFAADSAHHTHSTPSSSSSSTPRHHIH-HLQHHKGF---PQSETFGILAALPENEASS 120
           + +   DS       PSSSSS  P HH H H  HHKGF   P   +FGILAALPEN+ +S
Sbjct: 61  SNN--VDSTE-----PSSSSSPIPNHHNHNHNSHHKGFAYGPSDASFGILAALPENDHAS 120

Query: 121 SLRNSSYFYHK----ASVSSSSSSSPSSSRMIPTIPKPPLERLPLPISSSLKY-QSAPVN 180
               S +F+HK     SVS SSSSS SS+R+IP IPKPP +R P   SSSLK+ QSAPVN
Sbjct: 121 P-NGSHFFHHKPSVSVSVSLSSSSSSSSARLIPAIPKPPPDRTP---SSSLKFHQSAPVN 180

Query: 181 VPMMSKAAVQRHQEIDVDDVDE--SDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKG 240
           VP+M       H+E D DD +E  ++ EMLPPHEIVAR+ AQSP+L+ SVLEG GRTLKG
Sbjct: 181 VPLMPMRR-HHHREFDDDDGNEDAAEEEMLPPHEIVARNSAQSPMLAYSVLEGVGRTLKG 238

[Close]

BLAST of CmoCh18G006730 vs. TAIR10
Match: AT3G15040.1 (AT3G15040.1 Protein of unknown function, DUF584)

HSP 1 Score: 134.8 bits (338), Expect = 8.4e-32
Identity = 97/177 (54.80%), Postives = 117/177 (66.10%), Query Frame = 1


Query: 73  PSSSSSSTPRHHIHHLQHHKGFPQSETFGILAALPENEASSSLRNSSYFYHKASVSSSSS 132
           P SS SS+   ++ H+ HHK           AAL  + +S++  +SS      S   +S+
Sbjct: 81  PESSGSSS---YLSHVFHHKP---------AAALSTSVSSTASSSSS------SGGGASA 140

Query: 133 SSPSSSRMIPTIPKPPLERLPLPIS--SSLKY-QSAPVNVPMMSKAAVQRHQE----IDV 192
            S SS+R IPT PKPP ERLP   S     KY QSAPV VP++S A + RH++     DV
Sbjct: 141 GSSSSARAIPTAPKPPQERLPFSASFVGGGKYPQSAPVQVPLVSSAMMNRHKKEFKLTDV 200

Query: 193 --DDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 241
             DD +E +GEMLPPHEIVARSLAQS LLSCSVLEGAGRTLKGRDLRQVRNAV+RRT
Sbjct: 201 VDDDEEEEEGEMLPPHEIVARSLAQSSLLSCSVLEGAGRTLKGRDLRQVRNAVFRRT 239

[Close]

BLAST of CmoCh18G006730 vs. TAIR10
Match: AT4G04630.1 (AT4G04630.1 Protein of unknown function, DUF584)

HSP 1 Score: 73.2 bits (178), Expect = 3.0e-13
Identity = 61/150 (40.67%), Postives = 78/150 (52.00%), Query Frame = 1


Query: 102 ILAALPENEASSSLRN--SSYFYHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLPISSS 161
           + + L E E SS       S+F    S SSSSSSSP + R    +             S 
Sbjct: 32  VWSVLREGETSSPEMKIPKSHF----SSSSSSSSSPWNIRRSKEV-------------SG 91

Query: 162 LKYQSAPVNVPMMSKA---------AVQRHQEIDVDDVDESDGEMLPPHEIVARSLAQSP 221
           +K  SAP+NVP  SK          +   H     DD ++ DG M+PPHE VAR LA++ 
Sbjct: 92  VKQSSAPMNVPDWSKVYGDSKSNRRSSHLHSHAADDDDEDDDGCMVPPHEWVARKLARTQ 151

Query: 222 LLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 241
           + S S+ EG GRTLKGRDL +VRNAV  +T
Sbjct: 152 ISSFSMCEGVGRTLKGRDLSKVRNAVLSKT 164

[Close]

BLAST of CmoCh18G006730 vs. TAIR10
Match: AT4G21970.1 (AT4G21970.1 Protein of unknown function, DUF584)

HSP 1 Score: 68.9 bits (167), Expect = 5.7e-12
Identity = 58/144 (40.28%), Postives = 76/144 (52.78%), Query Frame = 1


Query: 108 ENEASSSLRNSSYFYHKASVSSS----SSSSPSSSRMIPTIPKPPLERLPLPISSSLKYQ 167
           E E  S LR S     +  +S S    S+SS SS+R IP   +         +S   K  
Sbjct: 9   EEEVWSVLRESETQGPEMKMSKSNNLFSASSSSSARYIPKGNE---------VSGGAKQS 68

Query: 168 SAPVNVPMMSKAAVQRHQEID-------VDDVDESDGEMLPPHEIVARSLAQSPLLSCSV 227
           SAP+N+P  SK      +          +DD DE  G M+PPHE+VA+ LA++ + S S+
Sbjct: 69  SAPMNIPDWSKVYGYSKKNTSSHLHSWAIDDDDE--GSMVPPHELVAKRLARTQISSFSM 128

Query: 228 LEGAGRTLKGRDLRQVRNAVWRRT 241
            EG GRTLKGRDL + RNAV  RT
Sbjct: 129 CEGIGRTLKGRDLSKTRNAVLTRT 141

[Close]

BLAST of CmoCh18G006730 vs. TAIR10
Match: AT1G61930.1 (AT1G61930.1 Protein of unknown function, DUF584)

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-11
Identity = 38/85 (44.71%), Postives = 55/85 (64.71%), Query Frame = 1


Query: 164 SAPVNVPMMSKA----AVQRHQEIDVDDVDESDGEMLPPHEIVARSLAQSPLL----SCS 223
           SAPVNVP  SK     +V+   E+D +D ++ +  M+PPHE +A+S A+          S
Sbjct: 115 SAPVNVPDWSKIYRVDSVESIHELDDEDDEDEESGMMPPHEYLAKSQARRSRKIGGGGAS 174

Query: 224 VLEGAGRTLKGRDLRQVRNAVWRRT 241
           V +G GRTLKGR+LR+VR+A+W +T
Sbjct: 175 VFDGVGRTLKGRELRRVRDAIWSQT 199

[Close]

BLAST of CmoCh18G006730 vs. TAIR10
Match: AT1G11700.1 (AT1G11700.1 Protein of unknown function, DUF584)

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-10
Identity = 40/84 (47.62%), Postives = 54/84 (64.29%), Query Frame = 1


Query: 164 SAPVNVPMMSKA----AVQRHQEIDVDDVDESDGEMLPPHEIVARSLAQSPLLSC---SV 223
           SAPVNVP  SK     +V+   E D ++ +E  G M+PPHE +A+S  +    S    SV
Sbjct: 115 SAPVNVPDWSKIYRVNSVESIHESDEEE-EEDSGMMMPPHEYLAKSQQRRSRKSGGGGSV 174

Query: 224 LEGAGRTLKGRDLRQVRNAVWRRT 241
            EG GRTLKGR+LR+VR+A+W +T
Sbjct: 175 FEGVGRTLKGRELRRVRDAIWSQT 197

[Close]

BLAST of CmoCh18G006730 vs. NCBI nr
Match: gi|778664992|ref|XP_011648459.1| (PREDICTED: uncharacterized protein LOC105434471 [Cucumis sativus])

HSP 1 Score: 394.4 bits (1012), Expect = 1.7e-106
Identity = 210/240 (87.50%), Postives = 220/240 (91.67%), Query Frame = 1


Query: 1   MDLTPPSSRFRHRKSPSSERFLLSFSSPSPRPSNPTSANALDNDDNNSELNEDDVFWTGD 60
           MDL  PSSRFRHR SPSSERFL SF SP  R SNP+S  ALD+D   SELNEDDVFWTGD
Sbjct: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDD---SELNEDDVFWTGD 60

Query: 61  FAADSAHHTHSTPSSSSSSTPRHHIHHLQHHKGFPQSETFGILAALPENEASSSLRNSSY 120
           FA+DS HH+HSTPSSSSSSTPRHHIHHLQHHKGFP  ETFGILAALPENEASSSLRNSS+
Sbjct: 61  FASDSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSH 120

Query: 121 FYHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLPISSSLKYQSAPVNVPMMSKAAVQRH 180
           FYHKASVSSSSSSSPSSSRMIPTIPKPPL+RLPLPIS+SLKYQSAPVNVP+MSKA VQR 
Sbjct: 121 FYHKASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQ 180

Query: 181 QEIDVDDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 240
            E+DVDDVDE DGEMLPPHEIVARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRRT
Sbjct: 181 LEVDVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 237

[Close]

BLAST of CmoCh18G006730 vs. NCBI nr
Match: gi|700209847|gb|KGN64943.1| (hypothetical protein Csa_1G165750 [Cucumis sativus])

HSP 1 Score: 394.4 bits (1012), Expect = 1.7e-106
Identity = 210/240 (87.50%), Postives = 220/240 (91.67%), Query Frame = 1


Query: 1   MDLTPPSSRFRHRKSPSSERFLLSFSSPSPRPSNPTSANALDNDDNNSELNEDDVFWTGD 60
           MDL  PSSRFRHR SPSSERFL SF SP  R SNP+S  ALD+D   SELNEDDVFWTGD
Sbjct: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDD---SELNEDDVFWTGD 60

Query: 61  FAADSAHHTHSTPSSSSSSTPRHHIHHLQHHKGFPQSETFGILAALPENEASSSLRNSSY 120
           FA+DS HH+HSTPSSSSSSTPRHHIHHLQHHKGFP  ETFGILAALPENEASSSLRNSS+
Sbjct: 61  FASDSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSH 120

Query: 121 FYHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLPISSSLKYQSAPVNVPMMSKAAVQRH 180
           FYHKASVSSSSSSSPSSSRMIPTIPKPPL+RLPLPIS+SLKYQSAPVNVP+MSKA VQR 
Sbjct: 121 FYHKASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQ 180

Query: 181 QEIDVDDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 240
            E+DVDDVDE DGEMLPPHEIVARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRRT
Sbjct: 181 LEVDVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 237

[Close]

BLAST of CmoCh18G006730 vs. NCBI nr
Match: gi|659071654|ref|XP_008461249.1| (PREDICTED: putative protein TPRXL [Cucumis melo])

HSP 1 Score: 387.5 bits (994), Expect = 2.0e-104
Identity = 208/240 (86.67%), Postives = 218/240 (90.83%), Query Frame = 1


Query: 1   MDLTPPSSRFRHRKSPSSERFLLSFSSPSPRPSNPTSANALDNDDNNSELNEDDVFWTGD 60
           MDL   SSRFRHR SPSSERFL SF SP  R SNP+S  ALD+D   SELNEDDVFWTGD
Sbjct: 1   MDLNLHSSRFRHRNSPSSERFLASFPSPPVRTSNPSSTTALDDD---SELNEDDVFWTGD 60

Query: 61  FAADSAHHTHSTPSSSSSSTPRHHIHHLQHHKGFPQSETFGILAALPENEASSSLRNSSY 120
           FA+DS HH+HSTPSSSSSSTPRHHIHHLQHHKGFP  ETFGILAALPENEASSSLRNSS+
Sbjct: 61  FASDSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSH 120

Query: 121 FYHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLPISSSLKYQSAPVNVPMMSKAAVQRH 180
           FYHKASVSSSSSSSPSSSRMIPTIPKPPL+RLPLPIS+SLKYQSAPVNVP+MSKA VQR 
Sbjct: 121 FYHKASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQ 180

Query: 181 QEIDVDDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 240
            E+DVD VDE DGEMLPPHEIVARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRRT
Sbjct: 181 LEVDVDYVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 237

[Close]

BLAST of CmoCh18G006730 vs. NCBI nr
Match: gi|1009113353|ref|XP_015873022.1| (PREDICTED: uncharacterized protein LOC107410124 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 236.5 bits (602), Expect = 5.8e-59
Identity = 150/257 (58.37%), Postives = 189/257 (73.54%), Query Frame = 1


Query: 1   MDLTPPSSRFRHRKSPSSERFLLSFSSPSPRPSNPTSANALDNDDNNSELNEDDVFWTGD 60
           MDL   ++R R++K  S++RFL SF   SP   +  +A+   +     ELNEDDVFW+ D
Sbjct: 1   MDLNG-TARTRYKKPSSTQRFLGSFPCASP---DKATASTTSSSAPADELNEDDVFWSAD 60

Query: 61  FAA-DSAHHTHSTPSSSSSSTPRHHIHHLQH----------HKGFPQSETFGILAALPEN 120
           F+A +  HH +  P+S+S S+   H+HH +H          HKGF Q E+FGILAALPEN
Sbjct: 61  FSAVEPNHHHNPNPTSTSPSSTPRHLHHNRHSHTTLNHHHLHKGFAQPESFGILAALPEN 120

Query: 121 EASS-SLRNSSYFYHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLPISSSLKY-QSAPV 180
           E SS +LRNSS+FYHKASVSSSSSSS SSSRMIP IPKPP ER+    SSS+KY QSAP+
Sbjct: 121 ETSSPNLRNSSHFYHKASVSSSSSSSSSSSRMIPVIPKPPQERINPAPSSSVKYHQSAPL 180

Query: 181 NVPMMSKAAVQRHQEIDVDDVDESDG--EMLPPHEIVAR--SLAQSPLLSCSVLEGAGRT 240
           N+P++S+ A++RH++  V++ DE DG  EMLPPHEIVAR  + AQSP+L+CSVLEG GRT
Sbjct: 181 NIPVLSQ-AIRRHRDFFVEEKDEEDGEAEMLPPHEIVARGSAAAQSPMLACSVLEGVGRT 240

[Close]

BLAST of CmoCh18G006730 vs. NCBI nr
Match: gi|645218143|ref|XP_008229135.1| (PREDICTED: transcription factor MafB-like [Prunus mume])

HSP 1 Score: 229.6 bits (584), Expect = 7.1e-57
Identity = 146/249 (58.63%), Postives = 185/249 (74.30%), Query Frame = 1


Query: 1   MDLTPPSSRFRHRKSPS-SERFLLSFSSPSPRPSNPTSANALDNDDNNSELNEDDVFWTG 60
           MD   P+ R R +KS + SERFL ++  P   P+NP+ A ++ +     ELNEDDVFW+ 
Sbjct: 1   MDTRNPT-RLRPKKSTTPSERFLGAY--PHALPNNPSPATSIGD-----ELNEDDVFWSN 60

Query: 61  DFAADSAHHTHSTPSSSSSSTPRH--HIHHLQHHKGFPQSETFGILAALPENEASSS-LR 120
           D AA+ ++  HSTPSSS+SSTPRH  H HH  HHKGF Q E+FGILAALPE E SSS  R
Sbjct: 61  DVAAEPSY--HSTPSSSTSSTPRHRSHHHHHHHHKGFSQPESFGILAALPEREPSSSNHR 120

Query: 121 NSSYFYHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLPISSSLKY-QSAPVNVPMMSKA 180
             S+FYHK+SVSSS+SSSP  S++IP IPKPP +R   P  SS+KY QSAP+NVP+++  
Sbjct: 121 PHSHFYHKSSVSSSASSSP--SQLIPAIPKPPHDRFNYPPLSSVKYHQSAPLNVPVLAN- 180

Query: 181 AVQRHQEIDV----DDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQ 240
           A+++H++ D      D DE +GEMLPPHEIVARS + +P+L+CSVLEG GRTLKGRDLR+
Sbjct: 181 AMRKHRKFDAVDDDHDDDEGEGEMLPPHEIVARSSSHTPMLACSVLEGVGRTLKGRDLRR 236

The following BLAST results are available for this feature:

BLAST of CmoCh18G006730 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh18G006730 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT40_CUCSA	1.2e-106	87.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G165750 PE=4 SV=1	[more]
W9RQ25_9ROSA	5.5e-56	58.89	Uncharacterized protein OS=Morus notabilis GN=L484_016293 PE=4 SV=1	[more]
M5WPD6_PRUPE	1.3e-54	58.92	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011154mg PE=4 SV=1	[more]
A0A067KQ46_JATCU	7.4e-53	59.67	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12706 PE=4 SV=1	[more]
I1LTX0_SOYBN	8.8e-46	55.91	Uncharacterized protein OS=Glycine max GN=GLYMA_12G185900 PE=4 SV=1	[more]

BLAST of CmoCh18G006730 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15040.1	8.4e-32	54.80	Protein of unknown function, DUF584	[more]
AT4G04630.1	3.0e-13	40.67	Protein of unknown function, DUF584	[more]
AT4G21970.1	5.7e-12	40.28	Protein of unknown function, DUF584	[more]
AT1G61930.1	1.3e-11	44.71	Protein of unknown function, DUF584	[more]
AT1G11700.1	1.4e-10	47.62	Protein of unknown function, DUF584	[more]

BLAST of CmoCh18G006730 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778664992\|ref\|XP_011648459.1\|	1.7e-106	87.50	PREDICTED: uncharacterized protein LOC105434471 [Cucumis sativus]	[more]
gi\|700209847\|gb\|KGN64943.1\|	1.7e-106	87.50	hypothetical protein Csa_1G165750 [Cucumis sativus]	[more]
gi\|659071654\|ref\|XP_008461249.1\|	2.0e-104	86.67	PREDICTED: putative protein TPRXL [Cucumis melo]	[more]
gi\|1009113353\|ref\|XP_015873022.1\|	5.8e-59	58.37	PREDICTED: uncharacterized protein LOC107410124 isoform X1 [Ziziphus jujuba]	[more]
gi\|645218143\|ref\|XP_008229135.1\|	7.1e-57	58.63	PREDICTED: transcription factor MafB-like [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007608	Senescence_reg_S40

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G006730.1	CmoCh18G006730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 48..240 score: 4.0
None	No IPR available	PANTHER	PTHR33083	FAMILY NOT NAMED	coord: 129..242 score: 1.4E-56coord: 42..77 score: 1.4
None	No IPR available	PANTHER	PTHR33083:SF16	SUBFAMILY NOT NAMED	coord: 129..242 score: 1.4E-56coord: 42..77 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh18G006730	Cucsa.319820	Cucumber (Gy14) v1	cgycmoB0883
CmoCh18G006730	CmaCh18G006490	Cucurbita maxima (Rimu)	cmacmoB410
CmoCh18G006730	Cla003044	Watermelon (97103) v1	cmowmB384
CmoCh18G006730	Csa1G165750	Cucumber (Chinese Long) v2	cmocuB383
CmoCh18G006730	MELO3C004692	Melon (DHL92) v3.5.1	cmomeB353
CmoCh18G006730	CSPI01G14840	Wild cucumber (PI 183967)	cmocpiB386
CmoCh18G006730	Cp4.1LG09g05520	Cucurbita pepo (Zucchini)	cmocpeB374
CmoCh18G006730	MELO3C004692.2	Melon (DHL92) v3.6.1	cmomedB400
CmoCh18G006730	CsaV3_1G014950	Cucumber (Chinese Long) v3	cmocucB0460
CmoCh18G006730	Bhi08G000036	Wax gourd	cmowgoB0532
CmoCh18G006730	CsGy1G014670	Cucumber (Gy14) v2	cgybcmoB085
CmoCh18G006730	Carg26265	Silver-seed gourd	carcmoB0000

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh18G006730	Watermelon (97103) v2	cmowmbB386
CmoCh18G006730	Watermelon (Charleston Gray)	cmowcgB346
CmoCh18G006730	Watermelon (97103) v1	cmowmB376
CmoCh18G006730	Watermelon (97103) v1	cmowmB382
CmoCh18G006730	Bottle gourd (USVL1VR-Ls)	cmolsiB362