CmaCh18G006490 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G006490
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Senescence regulator
Location	Cma_Chr18 : 5914160 .. 5914891 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTCTCCCCTCCTTCCTCCCGTTTCCGCCACCGGAAATCCCCCCCCTCCGAGCGCTTCCTTCTCTCCTTCTCTTCTCCCTCCCCCCGCCCTTCTAACCCTACCTCCGCCAACGCCCTCGACGACGACAACAACAGCGAGCTCAACGAGGACGACGTCTTCTGGACTGGCGATTTCGCCGCTGATTCTGCCCACCATACCCACTCCACTCCCTCCTCCTCCTCCTCCTCCACTCCTCGCCACCATATTCATCACCTCCAGCATCACAAGGGCTTCCCCCAGTCTGAGACCTTCGGTATTCTCGCTGCCCTCCCTGAGAACGAGGCCTCCTCCAGCCTTCGGAACTCCTCGCATTTCTACCACAAGGCCTCCGTTTCCTCCTCCTCTTCCTCTTCCCCTTCCTCTTCGCGGATGATTCCGACGATCCCTAAACCTCCTCTCGAGCGGTTGCCCTTGACGATTTCTTCCTCGTTGAAGTACCAGTCCGCTCCGGTCAATGTGCCAATGATGTCCAAGGCGGCGGTTCAGAGACACCAAGAGATAGATGTGGATGATGTTGATGAAAGTGATGGGGAGATGTTGCCGCCTCATGAAATTGTCGCTAGAAGTTTGGCTCAATCGCCATTGTTGTCTTGCTCCGTGCTTGAGGGTGCTGGAAGGACGTTAAAGGGCAGGGATCTTCGCCAGGTTCGAAATGCTGTTTGGAGACGAACAGGTTTTCTTGATTAA

mRNA sequence

ATGGAGCTCTCCCCTCCTTCCTCCCGTTTCCGCCACCGGAAATCCCCCCCCTCCGAGCGCTTCCTTCTCTCCTTCTCTTCTCCCTCCCCCCGCCCTTCTAACCCTACCTCCGCCAACGCCCTCGACGACGACAACAACAGCGAGCTCAACGAGGACGACGTCTTCTGGACTGGCGATTTCGCCGCTGATTCTGCCCACCATACCCACTCCACTCCCTCCTCCTCCTCCTCCTCCACTCCTCGCCACCATATTCATCACCTCCAGCATCACAAGGGCTTCCCCCAGTCTGAGACCTTCGGTATTCTCGCTGCCCTCCCTGAGAACGAGGCCTCCTCCAGCCTTCGGAACTCCTCGCATTTCTACCACAAGGCCTCCGTTTCCTCCTCCTCTTCCTCTTCCCCTTCCTCTTCGCGGATGATTCCGACGATCCCTAAACCTCCTCTCGAGCGGTTGCCCTTGACGATTTCTTCCTCGTTGAAGTACCAGTCCGCTCCGGTCAATGTGCCAATGATGTCCAAGGCGGCGGTTCAGAGACACCAAGAGATAGATGTGGATGATGTTGATGAAAGTGATGGGGAGATGTTGCCGCCTCATGAAATTGTCGCTAGAAGTTTGGCTCAATCGCCATTGTTGTCTTGCTCCGTGCTTGAGGGTGCTGGAAGGACGTTAAAGGGCAGGGATCTTCGCCAGGTTCGAAATGCTGTTTGGAGACGAACAGGTTTTCTTGATTAA

Coding sequence (CDS)

ATGGAGCTCTCCCCTCCTTCCTCCCGTTTCCGCCACCGGAAATCCCCCCCCTCCGAGCGCTTCCTTCTCTCCTTCTCTTCTCCCTCCCCCCGCCCTTCTAACCCTACCTCCGCCAACGCCCTCGACGACGACAACAACAGCGAGCTCAACGAGGACGACGTCTTCTGGACTGGCGATTTCGCCGCTGATTCTGCCCACCATACCCACTCCACTCCCTCCTCCTCCTCCTCCTCCACTCCTCGCCACCATATTCATCACCTCCAGCATCACAAGGGCTTCCCCCAGTCTGAGACCTTCGGTATTCTCGCTGCCCTCCCTGAGAACGAGGCCTCCTCCAGCCTTCGGAACTCCTCGCATTTCTACCACAAGGCCTCCGTTTCCTCCTCCTCTTCCTCTTCCCCTTCCTCTTCGCGGATGATTCCGACGATCCCTAAACCTCCTCTCGAGCGGTTGCCCTTGACGATTTCTTCCTCGTTGAAGTACCAGTCCGCTCCGGTCAATGTGCCAATGATGTCCAAGGCGGCGGTTCAGAGACACCAAGAGATAGATGTGGATGATGTTGATGAAAGTGATGGGGAGATGTTGCCGCCTCATGAAATTGTCGCTAGAAGTTTGGCTCAATCGCCATTGTTGTCTTGCTCCGTGCTTGAGGGTGCTGGAAGGACGTTAAAGGGCAGGGATCTTCGCCAGGTTCGAAATGCTGTTTGGAGACGAACAGGTTTTCTTGATTAA

Protein sequence

MELSPPSSRFRHRKSPPSERFLLSFSSPSPRPSNPTSANALDDDNNSELNEDDVFWTGDFAADSAHHTHSTPSSSSSSTPRHHIHHLQHHKGFPQSETFGILAALPENEASSSLRNSSHFYHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLTISSSLKYQSAPVNVPMMSKAAVQRHQEIDVDDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGFLD

Homology

[Close]

BLAST of CmaCh18G006490 vs. TrEMBL
Match: A0A0A0LT40_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G165750 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 3.6e-109
Identity = 213/243 (87.65%), Postives = 223/243 (91.77%), Query Frame = 1


Query: 1   MELSPPSSRFRHRKSPPSERFLLSFSSPSPRPSNPTSANALDDDNNSELNEDDVFWTGDF 60
           M+L+ PSSRFRHR SP SERFL SF SP  R SNP+S  ALDDD  SELNEDDVFWTGDF
Sbjct: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDD--SELNEDDVFWTGDF 60

Query: 61  AADSAHHTHSTPSSSSSSTPRHHIHHLQHHKGFPQSETFGILAALPENEASSSLRNSSHF 120
           A+DS HH+HSTPSSSSSSTPRHHIHHLQHHKGFP  ETFGILAALPENEASSSLRNSSHF
Sbjct: 61  ASDSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHF 120

Query: 121 YHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLTISSSLKYQSAPVNVPMMSKAAVQRHQ 180
           YHKASVSSSSSSSPSSSRMIPTIPKPPL+RLPL IS+SLKYQSAPVNVP+MSKA VQR  
Sbjct: 121 YHKASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQL 180

Query: 181 EIDVDDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 240
           E+DVDDVDE DGEMLPPHEIVARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRRTG
Sbjct: 181 EVDVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 240

Query: 241 FLD 244
           FLD
Sbjct: 241 FLD 241

[Close]

BLAST of CmaCh18G006490 vs. TrEMBL
Match: M5WPD6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011154mg PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 7.6e-59
Identity = 148/244 (60.66%), Postives = 174/244 (71.31%), Query Frame = 1


Query: 5   PPSSRFRHRKSP-PSERFLLSFSSPSPRPSNPTSANALDDDNNSELNEDDVFWTGDFAAD 64
           P  +R R +KS  PSERFL ++  P   P+NP+ A ++ D    ELNEDDVFW+ D AA+
Sbjct: 4   PNPTRLRPKKSTTPSERFLGAY--PHALPNNPSPATSIGD----ELNEDDVFWSNDVAAE 63

Query: 65  SAHHTHSTPSSSSSSTPRHHIHHLQHH--KGFPQSETFGILAALPENEASSSL-RNSSHF 124
             HH  STPSSS+SSTPRHH HH  HH  KGF Q E+FGILAALPE E SSS  R  SHF
Sbjct: 64  PIHH--STPSSSTSSTPRHHSHHHHHHHHKGFSQPESFGILAALPEREPSSSNHRPHSHF 123

Query: 125 YHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLTISSSLKY-QSAPVNVPMMSKAAVQRH 184
           YHK+SVSSS+SSSPS  ++IP IPKPP +R      SS+KY QSAP+NVP          
Sbjct: 124 YHKSSVSSSASSSPS--QLIPAIPKPPHDRFHHPPLSSVKYHQSAPLNVP---------- 183

Query: 185 QEIDVDDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRT 244
                 D DE +GEMLPPHEIVARS + +P+L+CSVLEG GRTLKGRDLR+VRNAVWR+T
Sbjct: 184 ------DDDEGEGEMLPPHEIVARSSSHTPMLACSVLEGVGRTLKGRDLRRVRNAVWRQT 221

[Close]

BLAST of CmaCh18G006490 vs. TrEMBL
Match: W9RQ25_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016293 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.7e-58
Identity = 150/249 (60.24%), Postives = 187/249 (75.10%), Query Frame = 1


Query: 8   SRFRHRKSPPSERFLLSFSSPSPRPSNPTSANALDDDNNSELNEDDVFWTGDFAADSAHH 67
           +R RH++S  ++RFL +FS   P  + P++++A  D    ELNEDD+FWTGD  A+S  H
Sbjct: 4   TRIRHKQSTSTDRFLRAFSHSPPDTAGPSTSSAAGD----ELNEDDIFWTGDSVAESPRH 63

Query: 68  -----THSTPSSSSSSTPR--HHIHHLQHHKG-FPQSETFGILAALPENEASS-SLRNSS 127
                 +  PSS SS+  R  +H + + H KG F   E FGILAALPENE SS +LR+ S
Sbjct: 64  DGNGQNNHIPSSPSSTASRVNNHSNRIAHSKGGFAPPEGFGILAALPENETSSPNLRDLS 123

Query: 128 HFYHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLTISSSLKY-QSAPVNVPMMSKAAVQ 187
           HF+ KASVSSSSSSSP+SSR+IP IPKPP +R+   I+SS+KY QSAPVNVPM+S+ A++
Sbjct: 124 HFFVKASVSSSSSSSPTSSRLIPVIPKPPQDRI-TPINSSVKYHQSAPVNVPMLSE-AMR 183

Query: 188 RHQEI--DVD-DVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNA 244
           R ++   +VD D D+ D EMLPPHEIVARSLA SPLLSCSVLEGAGRTLKGRDLRQVRNA
Sbjct: 184 RPRDFFAEVDADADDGDAEMLPPHEIVARSLAHSPLLSCSVLEGAGRTLKGRDLRQVRNA 243

[Close]

BLAST of CmaCh18G006490 vs. TrEMBL
Match: A0A067KQ46_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12706 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.2e-56
Identity = 148/246 (60.16%), Postives = 180/246 (73.17%), Query Frame = 1


Query: 7   SSRFRHRKSPPSERFLLSFSSPSPRPSNPTSANALDDDNNSELNEDDVFWTGDFAADSAH 66
           S+RFRHRK+  S+RFL +F  P     NP +  A ++DN  ELNEDD+F TGDF+  S H
Sbjct: 6   SARFRHRKTASSDRFLGAF--PRALQDNPATTAANNEDN--ELNEDDIFSTGDFSEASNH 65

Query: 67  HTHSTPSSSSSSTPRHHIHHLQHHKG-FPQSETFGILAALPENEASSSLRNSSHFYHKAS 126
           H +S PSS+SS  PRHH  H   HKG F Q E+FGILAALPE++++S      H Y K +
Sbjct: 66  H-NSPPSSTSS--PRHHPLHTHSHKGAFAQPESFGILAALPEHKSNSH----HHLYQKTT 125

Query: 127 VSS--SSSSSPSSSRMIPTIPKPPLERLPLTIS-SSLKY---QSAPVNVPMMSKAAVQRH 186
           +SS  SSSS+ S SR IP++PKPP +RLP++ S +S K+   QSAPVNVP++S A  +RH
Sbjct: 126 ISSPTSSSSTTSPSRFIPSVPKPPQDRLPISTSFNSSKFHQPQSAPVNVPVLSMAMRRRH 185

Query: 187 QEIDVDDV--DESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWR 244
           +E D  D   DE DGEMLPPHEIVAR  AQSP+L+CSVLEG GRTLKGRDLRQVRNAVWR
Sbjct: 186 KEFDEIDENEDEGDGEMLPPHEIVAR--AQSPMLACSVLEGVGRTLKGRDLRQVRNAVWR 238

[Close]

BLAST of CmaCh18G006490 vs. TrEMBL
Match: K7M300_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G315700 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 4.2e-49
Identity = 143/261 (54.79%), Postives = 175/261 (67.05%), Query Frame = 1


Query: 1   MELSPPSSRFRHRKSPPS--ERFLLSFSSPSPRPSNPTSANALDDD-----NNSELNEDD 60
           M+L  P+ RFR+RK   S  ERFL   SS +PR  N +S++A DDD     NN +L EDD
Sbjct: 1   MDLHDPN-RFRNRKQTLSSRERFLGVPSSHAPRIEN-SSSSATDDDVVVFSNNDDLIEDD 60

Query: 61  VFWTGDFAADSAHHTHSTPSSSSSSTPRHHIHHLQHHKGF---PQSETFGILAALPENEA 120
           V ++        ++  ST  SSSS  P  H +H  HHK F   P   +FGILAALPEN+ 
Sbjct: 61  VVFS--------NNDDSTEPSSSSQIPNRHHNHNNHHKAFAFGPSDASFGILAALPENDH 120

Query: 121 SSSLRNSSHFYH-KASVS-------SSSSSSPSSSRMIPTIPKPPLERLPLTISSSLKYQ 180
           +SS  N SHF+H K SVS       SSSSSS +++R+IP IPKPP ER P + SS   +Q
Sbjct: 121 ASS--NGSHFFHHKPSVSVSVSVSLSSSSSSSAAARLIPAIPKPPPERTPSSSSSLKFHQ 180

Query: 181 SAPVNVPMMSKAAVQRHQEIDVDDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRT 240
           SAPVNVP+M    ++RH   D DD D++  EMLPPHEIVAR+ AQSP+L+ SVLEG GRT
Sbjct: 181 SAPVNVPLM---PMRRHHRRDFDDDDDATEEMLPPHEIVARNSAQSPMLAYSVLEGVGRT 240

Query: 241 LKGRDLRQVRNAVWRRTGFLD 244
           LKGRDLRQVRNAVWR+TGFLD
Sbjct: 241 LKGRDLRQVRNAVWRQTGFLD 246

[Close]

BLAST of CmaCh18G006490 vs. TAIR10
Match: AT3G15040.1 (AT3G15040.1 Protein of unknown function, DUF584)

HSP 1 Score: 144.8 bits (364), Expect = 6.9e-35
Identity = 100/181 (55.25%), Postives = 122/181 (67.40%), Query Frame = 1


Query: 72  PSSSSSSTPRHHIHHLQHHKGFPQSETFGILAALPENEASSSLRNSSHFYHKASVSSSSS 131
           P SS SS+   ++ H+ HHK           AAL  + +S++  +SS      S   +S+
Sbjct: 81  PESSGSSS---YLSHVFHHKP---------AAALSTSVSSTASSSSS------SGGGASA 140

Query: 132 SSPSSSRMIPTIPKPPLERLPLTIS--SSLKY-QSAPVNVPMMSKAAVQRHQE----IDV 191
            S SS+R IPT PKPP ERLP + S     KY QSAPV VP++S A + RH++     DV
Sbjct: 141 GSSSSARAIPTAPKPPQERLPFSASFVGGGKYPQSAPVQVPLVSSAMMNRHKKEFKLTDV 200

Query: 192 --DDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGFL 244
             DD +E +GEMLPPHEIVARSLAQS LLSCSVLEGAGRTLKGRDLRQVRNAV+RRTGF+
Sbjct: 201 VDDDEEEEEGEMLPPHEIVARSLAQSSLLSCSVLEGAGRTLKGRDLRQVRNAVFRRTGFI 243

[Close]

BLAST of CmaCh18G006490 vs. TAIR10
Match: AT4G04630.1 (AT4G04630.1 Protein of unknown function, DUF584)

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-16
Identity = 65/154 (42.21%), Postives = 82/154 (53.25%), Query Frame = 1


Query: 101 ILAALPENEASSSLRN--SSHFYHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLTISSS 160
           + + L E E SS       SHF    S SSSSSSSP + R    +             S 
Sbjct: 32  VWSVLREGETSSPEMKIPKSHF----SSSSSSSSSPWNIRRSKEV-------------SG 91

Query: 161 LKYQSAPVNVPMMSKA---------AVQRHQEIDVDDVDESDGEMLPPHEIVARSLAQSP 220
           +K  SAP+NVP  SK          +   H     DD ++ DG M+PPHE VAR LA++ 
Sbjct: 92  VKQSSAPMNVPDWSKVYGDSKSNRRSSHLHSHAADDDDEDDDGCMVPPHEWVARKLARTQ 151

Query: 221 LLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGFLD 244
           + S S+ EG GRTLKGRDL +VRNAV  +TGFL+
Sbjct: 152 ISSFSMCEGVGRTLKGRDLSKVRNAVLSKTGFLE 168

[Close]

BLAST of CmaCh18G006490 vs. TAIR10
Match: AT4G21970.1 (AT4G21970.1 Protein of unknown function, DUF584)

HSP 1 Score: 76.6 bits (187), Expect = 2.3e-14
Identity = 61/148 (41.22%), Postives = 80/148 (54.05%), Query Frame = 1


Query: 107 ENEASSSLRNSSHFYHKASVSSS----SSSSPSSSRMIPTIPKPPLERLPLTISSSLKYQ 166
           E E  S LR S     +  +S S    S+SS SS+R IP   +         +S   K  
Sbjct: 9   EEEVWSVLRESETQGPEMKMSKSNNLFSASSSSSARYIPKGNE---------VSGGAKQS 68

Query: 167 SAPVNVPMMSKAAVQRHQEID-------VDDVDESDGEMLPPHEIVARSLAQSPLLSCSV 226
           SAP+N+P  SK      +          +DD DE  G M+PPHE+VA+ LA++ + S S+
Sbjct: 69  SAPMNIPDWSKVYGYSKKNTSSHLHSWAIDDDDE--GSMVPPHELVAKRLARTQISSFSM 128

Query: 227 LEGAGRTLKGRDLRQVRNAVWRRTGFLD 244
            EG GRTLKGRDL + RNAV  RTGFL+
Sbjct: 129 CEGIGRTLKGRDLSKTRNAVLTRTGFLE 145

[Close]

BLAST of CmaCh18G006490 vs. TAIR10
Match: AT1G61930.1 (AT1G61930.1 Protein of unknown function, DUF584)

HSP 1 Score: 73.2 bits (178), Expect = 2.5e-13
Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 1


Query: 163 SAPVNVPMMSKA----AVQRHQEIDVDDVDESDGEMLPPHEIVARSLAQSPLL----SCS 222
           SAPVNVP  SK     +V+   E+D +D ++ +  M+PPHE +A+S A+          S
Sbjct: 115 SAPVNVPDWSKIYRVDSVESIHELDDEDDEDEESGMMPPHEYLAKSQARRSRKIGGGGAS 174

Query: 223 VLEGAGRTLKGRDLRQVRNAVWRRTGF 242
           V +G GRTLKGR+LR+VR+A+W +TGF
Sbjct: 175 VFDGVGRTLKGRELRRVRDAIWSQTGF 201

[Close]

BLAST of CmaCh18G006490 vs. TAIR10
Match: AT1G11700.1 (AT1G11700.1 Protein of unknown function, DUF584)

HSP 1 Score: 69.7 bits (169), Expect = 2.8e-12
Identity = 42/86 (48.84%), Postives = 56/86 (65.12%), Query Frame = 1


Query: 163 SAPVNVPMMSKA----AVQRHQEIDVDDVDESDGEMLPPHEIVARSLAQSPLLSC---SV 222
           SAPVNVP  SK     +V+   E D ++ +E  G M+PPHE +A+S  +    S    SV
Sbjct: 115 SAPVNVPDWSKIYRVNSVESIHESDEEE-EEDSGMMMPPHEYLAKSQQRRSRKSGGGGSV 174

Query: 223 LEGAGRTLKGRDLRQVRNAVWRRTGF 242
            EG GRTLKGR+LR+VR+A+W +TGF
Sbjct: 175 FEGVGRTLKGRELRRVRDAIWSQTGF 199

[Close]

BLAST of CmaCh18G006490 vs. NCBI nr
Match: gi|700209847|gb|KGN64943.1| (hypothetical protein Csa_1G165750 [Cucumis sativus])

HSP 1 Score: 402.5 bits (1033), Expect = 5.2e-109
Identity = 213/243 (87.65%), Postives = 223/243 (91.77%), Query Frame = 1


Query: 1   MELSPPSSRFRHRKSPPSERFLLSFSSPSPRPSNPTSANALDDDNNSELNEDDVFWTGDF 60
           M+L+ PSSRFRHR SP SERFL SF SP  R SNP+S  ALDDD  SELNEDDVFWTGDF
Sbjct: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDD--SELNEDDVFWTGDF 60

Query: 61  AADSAHHTHSTPSSSSSSTPRHHIHHLQHHKGFPQSETFGILAALPENEASSSLRNSSHF 120
           A+DS HH+HSTPSSSSSSTPRHHIHHLQHHKGFP  ETFGILAALPENEASSSLRNSSHF
Sbjct: 61  ASDSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHF 120

Query: 121 YHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLTISSSLKYQSAPVNVPMMSKAAVQRHQ 180
           YHKASVSSSSSSSPSSSRMIPTIPKPPL+RLPL IS+SLKYQSAPVNVP+MSKA VQR  
Sbjct: 121 YHKASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQL 180

Query: 181 EIDVDDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 240
           E+DVDDVDE DGEMLPPHEIVARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRRTG
Sbjct: 181 EVDVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 240

Query: 241 FLD 244
           FLD
Sbjct: 241 FLD 241

[Close]

BLAST of CmaCh18G006490 vs. NCBI nr
Match: gi|778664992|ref|XP_011648459.1| (PREDICTED: uncharacterized protein LOC105434471 [Cucumis sativus])

HSP 1 Score: 395.6 bits (1015), Expect = 6.3e-107
Identity = 210/240 (87.50%), Postives = 220/240 (91.67%), Query Frame = 1


Query: 1   MELSPPSSRFRHRKSPPSERFLLSFSSPSPRPSNPTSANALDDDNNSELNEDDVFWTGDF 60
           M+L+ PSSRFRHR SP SERFL SF SP  R SNP+S  ALDDD  SELNEDDVFWTGDF
Sbjct: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDD--SELNEDDVFWTGDF 60

Query: 61  AADSAHHTHSTPSSSSSSTPRHHIHHLQHHKGFPQSETFGILAALPENEASSSLRNSSHF 120
           A+DS HH+HSTPSSSSSSTPRHHIHHLQHHKGFP  ETFGILAALPENEASSSLRNSSHF
Sbjct: 61  ASDSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHF 120

Query: 121 YHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLTISSSLKYQSAPVNVPMMSKAAVQRHQ 180
           YHKASVSSSSSSSPSSSRMIPTIPKPPL+RLPL IS+SLKYQSAPVNVP+MSKA VQR  
Sbjct: 121 YHKASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQL 180

Query: 181 EIDVDDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 240
           E+DVDDVDE DGEMLPPHEIVARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRRTG
Sbjct: 181 EVDVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 238

[Close]

BLAST of CmaCh18G006490 vs. NCBI nr
Match: gi|659071654|ref|XP_008461249.1| (PREDICTED: putative protein TPRXL [Cucumis melo])

HSP 1 Score: 395.6 bits (1015), Expect = 6.3e-107
Identity = 211/243 (86.83%), Postives = 221/243 (90.95%), Query Frame = 1


Query: 1   MELSPPSSRFRHRKSPPSERFLLSFSSPSPRPSNPTSANALDDDNNSELNEDDVFWTGDF 60
           M+L+  SSRFRHR SP SERFL SF SP  R SNP+S  ALDDD  SELNEDDVFWTGDF
Sbjct: 1   MDLNLHSSRFRHRNSPSSERFLASFPSPPVRTSNPSSTTALDDD--SELNEDDVFWTGDF 60

Query: 61  AADSAHHTHSTPSSSSSSTPRHHIHHLQHHKGFPQSETFGILAALPENEASSSLRNSSHF 120
           A+DS HH+HSTPSSSSSSTPRHHIHHLQHHKGFP  ETFGILAALPENEASSSLRNSSHF
Sbjct: 61  ASDSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHF 120

Query: 121 YHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLTISSSLKYQSAPVNVPMMSKAAVQRHQ 180
           YHKASVSSSSSSSPSSSRMIPTIPKPPL+RLPL IS+SLKYQSAPVNVP+MSKA VQR  
Sbjct: 121 YHKASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQL 180

Query: 181 EIDVDDVDESDGEMLPPHEIVARSLAQSPLLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 240
           E+DVD VDE DGEMLPPHEIVARSLAQSP+LSCSVLEGAGRTLKGRDLRQVRNAVWRRTG
Sbjct: 181 EVDVDYVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 240

Query: 241 FLD 244
           FLD
Sbjct: 241 FLD 241

[Close]

BLAST of CmaCh18G006490 vs. NCBI nr
Match: gi|1009113353|ref|XP_015873022.1| (PREDICTED: uncharacterized protein LOC107410124 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 249.2 bits (635), Expect = 7.3e-63
Identity = 154/256 (60.16%), Postives = 193/256 (75.39%), Query Frame = 1


Query: 7   SSRFRHRKSPPSERFLLSF--SSPSPRPSNPTSANALDDDNNSELNEDDVFWTGDFAA-D 66
           ++R R++K   ++RFL SF  +SP    ++ TS++A  D    ELNEDDVFW+ DF+A +
Sbjct: 6   TARTRYKKPSSTQRFLGSFPCASPDKATASTTSSSAPAD----ELNEDDVFWSADFSAVE 65

Query: 67  SAHHTHSTPSSSSSSTPRHHIHHLQH----------HKGFPQSETFGILAALPENEASS- 126
             HH +  P+S+S S+   H+HH +H          HKGF Q E+FGILAALPENE SS 
Sbjct: 66  PNHHHNPNPTSTSPSSTPRHLHHNRHSHTTLNHHHLHKGFAQPESFGILAALPENETSSP 125

Query: 127 SLRNSSHFYHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLTISSSLKY-QSAPVNVPMM 186
           +LRNSSHFYHKASVSSSSSSS SSSRMIP IPKPP ER+    SSS+KY QSAP+N+P++
Sbjct: 126 NLRNSSHFYHKASVSSSSSSSSSSSRMIPVIPKPPQERINPAPSSSVKYHQSAPLNIPVL 185

Query: 187 SKAAVQRHQEIDVDDVDESDG--EMLPPHEIVAR--SLAQSPLLSCSVLEGAGRTLKGRD 244
           S+ A++RH++  V++ DE DG  EMLPPHEIVAR  + AQSP+L+CSVLEG GRTLKGRD
Sbjct: 186 SQ-AIRRHRDFFVEEKDEEDGEAEMLPPHEIVARGSAAAQSPMLACSVLEGVGRTLKGRD 245

[Close]

BLAST of CmaCh18G006490 vs. NCBI nr
Match: gi|1009113355|ref|XP_015873027.1| (PREDICTED: uncharacterized protein LOC107410124 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 240.7 bits (613), Expect = 2.6e-60
Identity = 151/256 (58.98%), Postives = 190/256 (74.22%), Query Frame = 1


Query: 7   SSRFRHRKSPPSERFLLSF--SSPSPRPSNPTSANALDDDNNSELNEDDVFWTGDFAA-D 66
           ++R R++K   ++RFL SF  +SP    ++ TS++A  D    ELNEDDVFW+ DF+A +
Sbjct: 6   TARTRYKKPSSTQRFLGSFPCASPDKATASTTSSSAPAD----ELNEDDVFWSADFSAVE 65

Query: 67  SAHHTHSTPSSSSSSTPRHHIHHLQH----------HKGFPQSETFGILAALPENEASS- 126
             HH +  P+S+S S+   H+HH +H          HKGF Q E+FGILAALPENE SS 
Sbjct: 66  PNHHHNPNPTSTSPSSTPRHLHHNRHSHTTLNHHHLHKGFAQPESFGILAALPENETSSP 125

Query: 127 SLRNSSHFYHKASVSSSSSSSPSSSRMIPTIPKPPLERLPLTISSSLKY-QSAPVNVPMM 186
           +LRNSSHFYHKASVSSSSSSS    RMIP IPKPP ER+    SSS+KY QSAP+N+P++
Sbjct: 126 NLRNSSHFYHKASVSSSSSSS----RMIPVIPKPPQERINPAPSSSVKYHQSAPLNIPVL 185

Query: 187 SKAAVQRHQEIDVDDVDESDGE--MLPPHEIVAR--SLAQSPLLSCSVLEGAGRTLKGRD 244
           S+A ++RH++  V++ DE DGE  MLPPHEIVAR  + AQSP+L+CSVLEG GRTLKGRD
Sbjct: 186 SQA-IRRHRDFFVEEKDEEDGEAEMLPPHEIVARGSAAAQSPMLACSVLEGVGRTLKGRD 245

The following BLAST results are available for this feature:

BLAST of CmaCh18G006490 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh18G006490 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT40_CUCSA	3.6e-109	87.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G165750 PE=4 SV=1	[more]
M5WPD6_PRUPE	7.6e-59	60.66	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011154mg PE=4 SV=1	[more]
W9RQ25_9ROSA	1.7e-58	60.24	Uncharacterized protein OS=Morus notabilis GN=L484_016293 PE=4 SV=1	[more]
A0A067KQ46_JATCU	1.2e-56	60.16	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12706 PE=4 SV=1	[more]
K7M300_SOYBN	4.2e-49	54.79	Uncharacterized protein OS=Glycine max GN=GLYMA_13G315700 PE=4 SV=1	[more]

BLAST of CmaCh18G006490 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15040.1	6.9e-35	55.25	Protein of unknown function, DUF584	[more]
AT4G04630.1	1.9e-16	42.21	Protein of unknown function, DUF584	[more]
AT4G21970.1	2.3e-14	41.22	Protein of unknown function, DUF584	[more]
AT1G61930.1	2.5e-13	45.98	Protein of unknown function, DUF584	[more]
AT1G11700.1	2.8e-12	48.84	Protein of unknown function, DUF584	[more]

BLAST of CmaCh18G006490 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700209847\|gb\|KGN64943.1\|	5.2e-109	87.65	hypothetical protein Csa_1G165750 [Cucumis sativus]	[more]
gi\|778664992\|ref\|XP_011648459.1\|	6.3e-107	87.50	PREDICTED: uncharacterized protein LOC105434471 [Cucumis sativus]	[more]
gi\|659071654\|ref\|XP_008461249.1\|	6.3e-107	86.83	PREDICTED: putative protein TPRXL [Cucumis melo]	[more]
gi\|1009113353\|ref\|XP_015873022.1\|	7.3e-63	60.16	PREDICTED: uncharacterized protein LOC107410124 isoform X1 [Ziziphus jujuba]	[more]
gi\|1009113355\|ref\|XP_015873027.1\|	2.6e-60	58.98	PREDICTED: uncharacterized protein LOC107410124 isoform X2 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007608	Senescence_reg_S40

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G006490.1	CmaCh18G006490.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 47..243 score: 3.9
None	No IPR available	PANTHER	PTHR33083	FAMILY NOT NAMED	coord: 39..76 score: 1.2E-61coord: 128..243 score: 1.2
None	No IPR available	PANTHER	PTHR33083:SF16	SUBFAMILY NOT NAMED	coord: 39..76 score: 1.2E-61coord: 128..243 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh18G006490	Cucsa.319820	Cucumber (Gy14) v1	cgycmaB0884
CmaCh18G006490	Cla003044	Watermelon (97103) v1	cmawmB386
CmaCh18G006490	MELO3C004692	Melon (DHL92) v3.5.1	cmameB368
CmaCh18G006490	CmoCh18G006730	Cucurbita moschata (Rifu)	cmacmoB410
CmaCh18G006490	Lsi03G001280	Bottle gourd (USVL1VR-Ls)	cmalsiB378
CmaCh18G006490	Cp4.1LG09g05520	Cucurbita pepo (Zucchini)	cmacpeB415
CmaCh18G006490	CsaV3_1G015860	Cucumber (Chinese Long) v3	cmacucB0468
CmaCh18G006490	CsaV3_1G014950	Cucumber (Chinese Long) v3	cmacucB0473
CmaCh18G006490	Bhi08G000036	Wax gourd	cmawgoB0525
CmaCh18G006490	CsGy1G014670	Cucumber (Gy14) v2	cgybcmaB092
CmaCh18G006490	Carg26265	Silver-seed gourd	carcmaB0000

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh18G006490	Cucurbita pepo (Zucchini)	cmacpeB418
CmaCh18G006490	Cucumber (Gy14) v2	cgybcmaB095
CmaCh18G006490	Melon (DHL92) v3.6.1	cmamedB425
CmaCh18G006490	Cucumber (Chinese Long) v3	cmacucB0476
CmaCh18G006490	Watermelon (97103) v2	cmawmbB394
CmaCh18G006490	Watermelon (97103) v2	cmawmbB412
CmaCh18G006490	Cucurbita maxima (Rimu)	cmacmaB211
CmaCh18G006490	Cucurbita maxima (Rimu)	cmacmaB214
CmaCh18G006490	Wild cucumber (PI 183967)	cmacpiB403
CmaCh18G006490	Cucumber (Chinese Long) v2	cmacuB399
CmaCh18G006490	Melon (DHL92) v3.5.1	cmameB369
CmaCh18G006490	Watermelon (Charleston Gray)	cmawcgB341
CmaCh18G006490	Watermelon (97103) v1	cmawmB383
CmaCh18G006490	Watermelon (97103) v1	cmawmB384