Csa1G165750 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G165750
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	AT3g15040/K15M2_18; contains IPR007608 (Senescence regulator)
Location	Chr1 : 10334857 .. 10336005 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGGAAGAATTATTGTGAAAATTAAAAGAAAAGAAAGCTGCGTTGTTCCCCTCATGGATTGGACGACGGCGCCCTGAATTCCTTCCTTTCTGAAATTCTGATTTTCCGTACGGACCCGCCATTCCCATCATTCATTCATTCTTTCATTCATTCATTCATTCATTCTCATGGACCTCAACCTTCCTTCCTCCCGCTTCCGCCACCGCAATTCCCCTTCCTCCGAACGCTTTCTCGCCTCCTTCCCTTCTCCCCCCGTTCGCTCTTCAAACCCTAGTTCCACCACCGCCCTCGACGACGATTCCGAGCTCAACGAAGACGACGTCTTCTGGACCGGCGATTTTGCTTCCGATTCCGTCCACCATAGCCACTCCACTCCTTCTTCCTCTTCCTCTTCAACTCCTCGTCACCATATTCATCACCTCCAGCATCACAAGGGTTTTCCTCTGCCTGAAACCTTCGGAATTCTCGCTGCTCTTCCCGAGAACGAGGCCTCCTCCAGTCTTAGAAACTCTTCTCATTTCTATCACAAGGCCTCTGTTTCGTCTTCTTCCTCCTCCTCCCCTTCGTCTTCTCGTATGATTCCCACGATCCCCAAACCTCCTCTGGACCGATTGCCTCTTCCCATTTCGACCTCGTTGAAGTACCAGTCTGCACCTGTGAATGTGCCAATAATGTCGAAGGCGGTTGTTCAAAGACAGCTGGAGGTTGATGTGGACGATGTTGATGAAGACGATGGGGAGATGTTGCCGCCGCATGAGATTGTGGCTAGAAGTTTGGCTCAGTCGCCGATGTTGTCGTGCTCTGTGCTTGAGGGAGCTGGAAGGACGTTAAAAGGGAGGGATCTTCGTCAGGTTCGCAACGCGGTTTGGAGACGAACAGGTTTTCTTGATTAAGGAATTGAATTCCAGTAATTATTTTTGGAGAACAGATTTGCACCATTCGCTAAGCTGCTACTGTCTGGTTCACTTTGACCACTTCTTGTGTCGCTCTTTTTAGAAATATATATTGAGGGTCCAGGAATATTTGAATCTGCTTGACACTCATCGTAACGAGGAATTGGAATTGTAATTATCTGAAGGGCGCCTAAGAATTTTCTTTGAAGCTTATTTGTAAGTTTGACTGTTATCTCAAAACGTTTTTCAATCCAT

mRNA sequence

ATGGACCTCAACCTTCCTTCCTCCCGCTTCCGCCACCGCAATTCCCCTTCCTCCGAACGCTTTCTCGCCTCCTTCCCTTCTCCCCCCGTTCGCTCTTCAAACCCTAGTTCCACCACCGCCCTCGACGACGATTCCGAGCTCAACGAAGACGACGTCTTCTGGACCGGCGATTTTGCTTCCGATTCCGTCCACCATAGCCACTCCACTCCTTCTTCCTCTTCCTCTTCAACTCCTCGTCACCATATTCATCACCTCCAGCATCACAAGGGTTTTCCTCTGCCTGAAACCTTCGGAATTCTCGCTGCTCTTCCCGAGAACGAGGCCTCCTCCAGTCTTAGAAACTCTTCTCATTTCTATCACAAGGCCTCTGTTTCGTCTTCTTCCTCCTCCTCCCCTTCGTCTTCTCGTATGATTCCCACGATCCCCAAACCTCCTCTGGACCGATTGCCTCTTCCCATTTCGACCTCGTTGAAGTACCAGTCTGCACCTGTGAATGTGCCAATAATGTCGAAGGCGGTTGTTCAAAGACAGCTGGAGGTTGATGTGGACGATGTTGATGAAGACGATGGGGAGATGTTGCCGCCGCATGAGATTGTGGCTAGAAGTTTGGCTCAGTCGCCGATGTTGTCGTGCTCTGTGCTTGAGGGAGCTGGAAGGACGTTAAAAGGGAGGGATCTTCGTCAGGTTCGCAACGCGGTTTGGAGACGAACAGGTTTTCTTGATTAA

Coding sequence (CDS)

ATGGACCTCAACCTTCCTTCCTCCCGCTTCCGCCACCGCAATTCCCCTTCCTCCGAACGCTTTCTCGCCTCCTTCCCTTCTCCCCCCGTTCGCTCTTCAAACCCTAGTTCCACCACCGCCCTCGACGACGATTCCGAGCTCAACGAAGACGACGTCTTCTGGACCGGCGATTTTGCTTCCGATTCCGTCCACCATAGCCACTCCACTCCTTCTTCCTCTTCCTCTTCAACTCCTCGTCACCATATTCATCACCTCCAGCATCACAAGGGTTTTCCTCTGCCTGAAACCTTCGGAATTCTCGCTGCTCTTCCCGAGAACGAGGCCTCCTCCAGTCTTAGAAACTCTTCTCATTTCTATCACAAGGCCTCTGTTTCGTCTTCTTCCTCCTCCTCCCCTTCGTCTTCTCGTATGATTCCCACGATCCCCAAACCTCCTCTGGACCGATTGCCTCTTCCCATTTCGACCTCGTTGAAGTACCAGTCTGCACCTGTGAATGTGCCAATAATGTCGAAGGCGGTTGTTCAAAGACAGCTGGAGGTTGATGTGGACGATGTTGATGAAGACGATGGGGAGATGTTGCCGCCGCATGAGATTGTGGCTAGAAGTTTGGCTCAGTCGCCGATGTTGTCGTGCTCTGTGCTTGAGGGAGCTGGAAGGACGTTAAAAGGGAGGGATCTTCGTCAGGTTCGCAACGCGGTTTGGAGACGAACAGGTTTTCTTGATTAA

Protein sequence

MDLNLPSSRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDDSELNEDDVFWTGDFASDSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYHKASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEVDVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGFLD*

Homology

[Close]

BLAST of Csa1G165750 vs. TrEMBL
Match: A0A0A0LT40_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G165750 PE=4 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 3.2e-134
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 1


Query: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDDSELNEDDVFWTGDFAS 60
           MDLNLPSSRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDDSELNEDDVFWTGDFAS
Sbjct: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDDSELNEDDVFWTGDFAS 60

Query: 61  DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH 120
           DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH
Sbjct: 61  DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH 120

Query: 121 KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEV 180
           KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEV
Sbjct: 121 KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEV 180

Query: 181 DVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGFL 240
           DVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGFL
Sbjct: 181 DVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGFL 240

Query: 241 D 242
           D
Sbjct: 241 D 241

[Close]

BLAST of Csa1G165750 vs. TrEMBL
Match: W9RQ25_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016293 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.6e-67
Identity = 150/246 (60.98%), Postives = 188/246 (76.42%), Query Frame = 1


Query: 8   SRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDDSELNEDDVFWTGDFASDSVHH-- 67
           +R RH+ S S++RFL +F   P  ++ PS+++A  D  ELNEDD+FWTGD  ++S  H  
Sbjct: 4   TRIRHKQSTSTDRFLRAFSHSPPDTAGPSTSSAAGD--ELNEDDIFWTGDSVAESPRHDG 63

Query: 68  ---SHSTPSSSSSSTPR--HHIHHLQHHKG-FPLPETFGILAALPENEASS-SLRNSSHF 127
              ++  PSS SS+  R  +H + + H KG F  PE FGILAALPENE SS +LR+ SHF
Sbjct: 64  NGQNNHIPSSPSSTASRVNNHSNRIAHSKGGFAPPEGFGILAALPENETSSPNLRDLSHF 123

Query: 128 YHKASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKY-QSAPVNVPIMSKAVVQ-R 187
           + KASVSSSSSSSP+SSR+IP IPKPP DR+  PI++S+KY QSAPVNVP++S+A+ + R
Sbjct: 124 FVKASVSSSSSSSPTSSRLIPVIPKPPQDRIT-PINSSVKYHQSAPVNVPMLSEAMRRPR 183

Query: 188 QLEVDVD-DVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWR 242
               +VD D D+ D EMLPPHEIVARSLA SP+LSCSVLEGAGRTLKGRDLRQVRNAV+R
Sbjct: 184 DFFAEVDADADDGDAEMLPPHEIVARSLAHSPLLSCSVLEGAGRTLKGRDLRQVRNAVFR 243

[Close]

BLAST of Csa1G165750 vs. TrEMBL
Match: A0A067KQ46_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12706 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 2.2e-66
Identity = 152/250 (60.80%), Postives = 184/250 (73.60%), Query Frame = 1


Query: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDDSELNEDDVFWTGDFAS 60
           MD+N  S+RFRHR + SS+RFL +FP       NP++T A ++D+ELNEDD+F TGDF+ 
Sbjct: 1   MDIN-GSARFRHRKTASSDRFLGAFPR--ALQDNPATTAANNEDNELNEDDIFSTGDFSE 60

Query: 61  DSVHHSHSTPSSSSSSTPRHHIHHLQHHKG-FPLPETFGILAALPENEASSSLRNSSHFY 120
            S HH+ S PSS+SS  PRHH  H   HKG F  PE+FGILAALPE++++S      H Y
Sbjct: 61  ASNHHN-SPPSSTSS--PRHHPLHTHSHKGAFAQPESFGILAALPEHKSNSH----HHLY 120

Query: 121 HKASVSS--SSSSSPSSSRMIPTIPKPPLDRLPLPIS-TSLKY---QSAPVNVPIMSKAV 180
            K ++SS  SSSS+ S SR IP++PKPP DRLP+  S  S K+   QSAPVNVP++S A+
Sbjct: 121 QKTTISSPTSSSSTTSPSRFIPSVPKPPQDRLPISTSFNSSKFHQPQSAPVNVPVLSMAM 180

Query: 181 VQRQLEVDVDDVDED--DGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRN 240
            +R  E D  D +ED  DGEMLPPHEIVAR  AQSPML+CSVLEG GRTLKGRDLRQVRN
Sbjct: 181 RRRHKEFDEIDENEDEGDGEMLPPHEIVAR--AQSPMLACSVLEGVGRTLKGRDLRQVRN 238

Query: 241 AVWRRTGFLD 242
           AVWRRTGFLD
Sbjct: 241 AVWRRTGFLD 238

[Close]

BLAST of Csa1G165750 vs. TrEMBL
Match: M5WPD6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011154mg PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 8.4e-66
Identity = 146/245 (59.59%), Postives = 175/245 (71.43%), Query Frame = 1


Query: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDDSELNEDDVFWTGDFAS 60
           MD+  P+     +++  SERFL ++P      +NPS  T++ D  ELNEDDVFW+ D A+
Sbjct: 1   MDVPNPTRLRPKKSTTPSERFLGAYPH--ALPNNPSPATSIGD--ELNEDDVFWSNDVAA 60

Query: 61  DSVHHSHSTPSSSSSSTPRHHIHHLQHH--KGFPLPETFGILAALPENEASSSL-RNSSH 120
           + +HHS  TPSSS+SSTPRHH HH  HH  KGF  PE+FGILAALPE E SSS  R  SH
Sbjct: 61  EPIHHS--TPSSSTSSTPRHHSHHHHHHHHKGFSQPESFGILAALPEREPSSSNHRPHSH 120

Query: 121 FYHKASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKY-QSAPVNVPIMSKAVVQR 180
           FYHK+SVSSS+SSSPS  ++IP IPKPP DR   P  +S+KY QSAP+NVP         
Sbjct: 121 FYHKSSVSSSASSSPS--QLIPAIPKPPHDRFHHPPLSSVKYHQSAPLNVP--------- 180

Query: 181 QLEVDVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRR 240
                  D DE +GEMLPPHEIVARS + +PML+CSVLEG GRTLKGRDLR+VRNAVWR+
Sbjct: 181 -------DDDEGEGEMLPPHEIVARSSSHTPMLACSVLEGVGRTLKGRDLRRVRNAVWRQ 221

Query: 241 TGFLD 242
           TGFLD
Sbjct: 241 TGFLD 221

[Close]

BLAST of Csa1G165750 vs. TrEMBL
Match: A0A0L9V659_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g136200 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 5.1e-55
Identity = 130/241 (53.94%), Postives = 165/241 (68.46%), Query Frame = 1


Query: 7   SSRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDDSELNEDDV-FWTGDFASDSVHH 66
           ++R   R   ++ER+L       V S  P  +  +  + EL EDDV F+ GD+ +D  H+
Sbjct: 6   TNRLPSRKPSATERYLG------VPSHAPPHSPFVATNVELQEDDVVFFNGDYHTDLNHY 65

Query: 67  SHSTPSSSSSS----TPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYHK 126
           + STPSSS+SS    TP HH+ H  H+       + GILAALPENE S SLRN S  +HK
Sbjct: 66  NASTPSSSTSSSASATPNHHLLHHHHNHNH---HSHGILAALPENETSHSLRNVSQHFHK 125

Query: 127 ASVSS--SSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLE 186
           AS+SS  S+SSS SSSR+IP IP+PP    P   S+   +QSAPVNVPI+S    +RQ E
Sbjct: 126 ASISSISSASSSSSSSRVIPAIPRPPPPAQP---SSFKFHQSAPVNVPILSDKARRRQCE 185

Query: 187 VDVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGF 241
            D DD +++DGEM+PPHEIVAR+ AQSP+L+ SV+EG GRTLKGRDLRQVRNAVWR+TGF
Sbjct: 186 FDDDDEEDEDGEMVPPHEIVARNSAQSPILAYSVMEGIGRTLKGRDLRQVRNAVWRQTGF 234

[Close]

BLAST of Csa1G165750 vs. TAIR10
Match: AT3G15040.1 (AT3G15040.1 Protein of unknown function, DUF584)

HSP 1 Score: 153.3 bits (386), Expect = 1.9e-37
Identity = 96/181 (53.04%), Postives = 118/181 (65.19%), Query Frame = 1


Query: 70  PSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYHKASVSSSSS 129
           P SS SS+   ++ H+ HHK           AAL  + +S++  +SS      S   +S+
Sbjct: 81  PESSGSSS---YLSHVFHHKP---------AAALSTSVSSTASSSSS------SGGGASA 140

Query: 130 SSPSSSRMIPTIPKPPLDRLPLPIST--SLKY-QSAPVNVPIMSKAVVQRQ------LEV 189
            S SS+R IPT PKPP +RLP   S     KY QSAPV VP++S A++ R        +V
Sbjct: 141 GSSSSARAIPTAPKPPQERLPFSASFVGGGKYPQSAPVQVPLVSSAMMNRHKKEFKLTDV 200

Query: 190 DVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGFL 242
             DD +E++GEMLPPHEIVARSLAQS +LSCSVLEGAGRTLKGRDLRQVRNAV+RRTGF+
Sbjct: 201 VDDDEEEEEGEMLPPHEIVARSLAQSSLLSCSVLEGAGRTLKGRDLRQVRNAVFRRTGFI 243

[Close]

BLAST of Csa1G165750 vs. TAIR10
Match: AT4G04630.1 (AT4G04630.1 Protein of unknown function, DUF584)

HSP 1 Score: 88.6 bits (218), Expect = 5.8e-18
Identity = 64/154 (41.56%), Postives = 80/154 (51.95%), Query Frame = 1


Query: 99  ILAALPENEASSSLRN--SSHFYHKASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTS 158
           + + L E E SS       SHF    S SSSSSSSP + R    +             + 
Sbjct: 32  VWSVLREGETSSPEMKIPKSHF----SSSSSSSSSPWNIRRSKEV-------------SG 91

Query: 159 LKYQSAPVNVPIMSKAVVQRQLE---------VDVDDVDEDDGEMLPPHEIVARSLAQSP 218
           +K  SAP+NVP  SK     +              DD ++DDG M+PPHE VAR LA++ 
Sbjct: 92  VKQSSAPMNVPDWSKVYGDSKSNRRSSHLHSHAADDDDEDDDGCMVPPHEWVARKLARTQ 151

Query: 219 MLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGFLD 242
           + S S+ EG GRTLKGRDL +VRNAV  +TGFL+
Sbjct: 152 ISSFSMCEGVGRTLKGRDLSKVRNAVLSKTGFLE 168

[Close]

BLAST of Csa1G165750 vs. TAIR10
Match: AT4G21970.1 (AT4G21970.1 Protein of unknown function, DUF584)

HSP 1 Score: 86.3 bits (212), Expect = 2.9e-17
Identity = 60/148 (40.54%), Postives = 79/148 (53.38%), Query Frame = 1


Query: 105 ENEASSSLRNSSHFYHKASVSSS----SSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQ 164
           E E  S LR S     +  +S S    S+SS SS+R IP   +         +S   K  
Sbjct: 9   EEEVWSVLRESETQGPEMKMSKSNNLFSASSSSSARYIPKGNE---------VSGGAKQS 68

Query: 165 SAPVNVPIMSKAVVQRQLEVD-------VDDVDEDDGEMLPPHEIVARSLAQSPMLSCSV 224
           SAP+N+P  SK     +           +DD  +D+G M+PPHE+VA+ LA++ + S S+
Sbjct: 69  SAPMNIPDWSKVYGYSKKNTSSHLHSWAIDD--DDEGSMVPPHELVAKRLARTQISSFSM 128

Query: 225 LEGAGRTLKGRDLRQVRNAVWRRTGFLD 242
            EG GRTLKGRDL + RNAV  RTGFL+
Sbjct: 129 CEGIGRTLKGRDLSKTRNAVLTRTGFLE 145

[Close]

BLAST of Csa1G165750 vs. TAIR10
Match: AT1G61930.1 (AT1G61930.1 Protein of unknown function, DUF584)

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-13
Identity = 68/230 (29.57%), Postives = 105/230 (45.65%), Query Frame = 1


Query: 18  SERFLASFPSPPVRSSNPSSTTALDDDSELNEDDVFWTGDFASDSVHHSHSTPSSSSSST 77
           S+R+L S+      +   S   ++ D+ EL E+D++      S +V H  +T +  S  T
Sbjct: 13  SDRYLGSY------TYGDSHGNSVTDELELGEEDIW------SPAVIHDDTTENEESYGT 72

Query: 78  PRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYHKASVSSSSSSSPSSSRM 137
                              + + A L +N     L   S  +  + V+  SSS     ++
Sbjct: 73  -------------------WNLRATLGKNGRVGGL---SLAFEGSLVAPPSSSPMIVQKI 132

Query: 138 IPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAV----VQRQLEVDVDDVDEDDGEML 197
                +   DR  L         SAPVNVP  SK      V+   E+D +D ++++  M+
Sbjct: 133 HGGGGEGEEDRRKLA-------SSAPVNVPDWSKIYRVDSVESIHELDDEDDEDEESGMM 192

Query: 198 PPHEIVARSLAQSPML----SCSVLEGAGRTLKGRDLRQVRNAVWRRTGF 240
           PPHE +A+S A+          SV +G GRTLKGR+LR+VR+A+W +TGF
Sbjct: 193 PPHEYLAKSQARRSRKIGGGGASVFDGVGRTLKGRELRRVRDAIWSQTGF 201

[Close]

BLAST of Csa1G165750 vs. TAIR10
Match: AT5G60680.1 (AT5G60680.1 Protein of unknown function, DUF584)

HSP 1 Score: 73.9 bits (180), Expect = 1.5e-13
Identity = 55/146 (37.67%), Postives = 74/146 (50.68%), Query Frame = 1


Query: 105 ENEASSSLRNSSHFYHKASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPV 164
           E++  + + + S  + +   SS  S   SS+R             P   S++    S PV
Sbjct: 35  ESDLFNPIHSDSPDFCRKISSSVRSGKKSSNR-------------PSAASSAAAASSLPV 94

Query: 165 NVPIMSKAVV-------QRQLEVDVDDVD--EDDGEMLPPHEIVARSLAQSPMLSCSVLE 224
           NVP  SK +        +R +E + DD D  ED G+ LPPHE     LA++ M S SV E
Sbjct: 95  NVPDWSKILRGEYRDNRRRSIEDNDDDDDDNEDGGDWLPPHEF----LAKTRMASFSVHE 154

Query: 225 GAGRTLKGRDLRQVRNAVWRRTGFLD 242
           G GRTLKGRDL +VRNA++ + GF D
Sbjct: 155 GVGRTLKGRDLSRVRNAIFEKFGFQD 163

[Close]

BLAST of Csa1G165750 vs. NCBI nr
Match: gi|700209847|gb|KGN64943.1| (hypothetical protein Csa_1G165750 [Cucumis sativus])

HSP 1 Score: 485.7 bits (1249), Expect = 4.6e-134
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 1


Query: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDDSELNEDDVFWTGDFAS 60
           MDLNLPSSRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDDSELNEDDVFWTGDFAS
Sbjct: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDDSELNEDDVFWTGDFAS 60

Query: 61  DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH 120
           DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH
Sbjct: 61  DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH 120

Query: 121 KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEV 180
           KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEV
Sbjct: 121 KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEV 180

Query: 181 DVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGFL 240
           DVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGFL
Sbjct: 181 DVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGFL 240

Query: 241 D 242
           D
Sbjct: 241 D 241

[Close]

BLAST of Csa1G165750 vs. NCBI nr
Match: gi|778664992|ref|XP_011648459.1| (PREDICTED: uncharacterized protein LOC105434471 [Cucumis sativus])

HSP 1 Score: 479.6 bits (1233), Expect = 3.3e-132
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 1


Query: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDDSELNEDDVFWTGDFAS 60
           MDLNLPSSRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDDSELNEDDVFWTGDFAS
Sbjct: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDDSELNEDDVFWTGDFAS 60

Query: 61  DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH 120
           DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH
Sbjct: 61  DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH 120

Query: 121 KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEV 180
           KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEV
Sbjct: 121 KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEV 180

Query: 181 DVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 239
           DVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG
Sbjct: 181 DVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTG 238

[Close]

BLAST of Csa1G165750 vs. NCBI nr
Match: gi|659071654|ref|XP_008461249.1| (PREDICTED: putative protein TPRXL [Cucumis melo])

HSP 1 Score: 477.6 bits (1228), Expect = 1.3e-131
Identity = 238/241 (98.76%), Postives = 239/241 (99.17%), Query Frame = 1


Query: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDDSELNEDDVFWTGDFAS 60
           MDLNL SSRFRHRNSPSSERFLASFPSPPVR+SNPSSTTALDDDSELNEDDVFWTGDFAS
Sbjct: 1   MDLNLHSSRFRHRNSPSSERFLASFPSPPVRTSNPSSTTALDDDSELNEDDVFWTGDFAS 60

Query: 61  DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH 120
           DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH
Sbjct: 61  DSVHHSHSTPSSSSSSTPRHHIHHLQHHKGFPLPETFGILAALPENEASSSLRNSSHFYH 120

Query: 121 KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEV 180
           KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEV
Sbjct: 121 KASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKYQSAPVNVPIMSKAVVQRQLEV 180

Query: 181 DVDDVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGFL 240
           DVD VDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGFL
Sbjct: 181 DVDYVDEDDGEMLPPHEIVARSLAQSPMLSCSVLEGAGRTLKGRDLRQVRNAVWRRTGFL 240

Query: 241 D 242
           D
Sbjct: 241 D 241

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BLAST of Csa1G165750 vs. NCBI nr
Match: gi|1009113353|ref|XP_015873022.1| (PREDICTED: uncharacterized protein LOC107410124 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 274.2 bits (700), Expect = 2.1e-70
Identity = 152/258 (58.91%), Postives = 192/258 (74.42%), Query Frame = 1


Query: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDDSELNEDDVFWTGDFAS 60
           MDLN  ++R R++   S++RFL SFP      +  S+T++     ELNEDDVFW+ DF++
Sbjct: 1   MDLN-GTARTRYKKPSSTQRFLGSFPCASPDKATASTTSSSAPADELNEDDVFWSADFSA 60

Query: 61  -DSVHHSHSTPSSSSSSTPRHHIHHLQH----------HKGFPLPETFGILAALPENEAS 120
            +  HH +  P+S+S S+   H+HH +H          HKGF  PE+FGILAALPENE S
Sbjct: 61  VEPNHHHNPNPTSTSPSSTPRHLHHNRHSHTTLNHHHLHKGFAQPESFGILAALPENETS 120

Query: 121 S-SLRNSSHFYHKASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKY-QSAPVNVP 180
           S +LRNSSHFYHKASVSSSSSSS SSSRMIP IPKPP +R+    S+S+KY QSAP+N+P
Sbjct: 121 SPNLRNSSHFYHKASVSSSSSSSSSSSRMIPVIPKPPQERINPAPSSSVKYHQSAPLNIP 180

Query: 181 IMSKAVVQRQLEVDVDDVDEDDG--EMLPPHEIVAR--SLAQSPMLSCSVLEGAGRTLKG 240
           ++S+A ++R  +  V++ DE+DG  EMLPPHEIVAR  + AQSPML+CSVLEG GRTLKG
Sbjct: 181 VLSQA-IRRHRDFFVEEKDEEDGEAEMLPPHEIVARGSAAAQSPMLACSVLEGVGRTLKG 240

Query: 241 RDLRQVRNAVWRRTGFLD 242
           RDLRQVRNAVWR+TGFLD
Sbjct: 241 RDLRQVRNAVWRQTGFLD 256

[Close]

BLAST of Csa1G165750 vs. NCBI nr
Match: gi|1009113355|ref|XP_015873027.1| (PREDICTED: uncharacterized protein LOC107410124 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 264.2 bits (674), Expect = 2.2e-67
Identity = 149/258 (57.75%), Postives = 189/258 (73.26%), Query Frame = 1


Query: 1   MDLNLPSSRFRHRNSPSSERFLASFPSPPVRSSNPSSTTALDDDSELNEDDVFWTGDFAS 60
           MDLN  ++R R++   S++RFL SFP      +  S+T++     ELNEDDVFW+ DF++
Sbjct: 1   MDLN-GTARTRYKKPSSTQRFLGSFPCASPDKATASTTSSSAPADELNEDDVFWSADFSA 60

Query: 61  -DSVHHSHSTPSSSSSSTPRHHIHHLQH----------HKGFPLPETFGILAALPENEAS 120
            +  HH +  P+S+S S+   H+HH +H          HKGF  PE+FGILAALPENE S
Sbjct: 61  VEPNHHHNPNPTSTSPSSTPRHLHHNRHSHTTLNHHHLHKGFAQPESFGILAALPENETS 120

Query: 121 S-SLRNSSHFYHKASVSSSSSSSPSSSRMIPTIPKPPLDRLPLPISTSLKY-QSAPVNVP 180
           S +LRNSSHFYHKASVSSSSSSS    RMIP IPKPP +R+    S+S+KY QSAP+N+P
Sbjct: 121 SPNLRNSSHFYHKASVSSSSSSS----RMIPVIPKPPQERINPAPSSSVKYHQSAPLNIP 180

Query: 181 IMSKAVVQRQLEVDVDDVDEDDGE--MLPPHEIVAR--SLAQSPMLSCSVLEGAGRTLKG 240
           ++S+A+ +R  +  V++ DE+DGE  MLPPHEIVAR  + AQSPML+CSVLEG GRTLKG
Sbjct: 181 VLSQAI-RRHRDFFVEEKDEEDGEAEMLPPHEIVARGSAAAQSPMLACSVLEGVGRTLKG 240

Query: 241 RDLRQVRNAVWRRTGFLD 242
           RDLRQVRNAVWR+TGFLD
Sbjct: 241 RDLRQVRNAVWRQTGFLD 252

The following BLAST results are available for this feature:

BLAST of Csa1G165750 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT40_CUCSA	3.2e-134	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G165750 PE=4 SV=1	[more]
W9RQ25_9ROSA	2.6e-67	60.98	Uncharacterized protein OS=Morus notabilis GN=L484_016293 PE=4 SV=1	[more]
A0A067KQ46_JATCU	2.2e-66	60.80	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12706 PE=4 SV=1	[more]
M5WPD6_PRUPE	8.4e-66	59.59	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011154mg PE=4 SV=1	[more]
A0A0L9V659_PHAAN	5.1e-55	53.94	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g136200 PE=4 SV=1	[more]

BLAST of Csa1G165750 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15040.1	1.9e-37	53.04	Protein of unknown function, DUF584	[more]
AT4G04630.1	5.8e-18	41.56	Protein of unknown function, DUF584	[more]
AT4G21970.1	2.9e-17	40.54	Protein of unknown function, DUF584	[more]
AT1G61930.1	1.1e-13	29.57	Protein of unknown function, DUF584	[more]
AT5G60680.1	1.5e-13	37.67	Protein of unknown function, DUF584	[more]

BLAST of Csa1G165750 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700209847\|gb\|KGN64943.1\|	4.6e-134	100.00	hypothetical protein Csa_1G165750 [Cucumis sativus]	[more]
gi\|778664992\|ref\|XP_011648459.1\|	3.3e-132	100.00	PREDICTED: uncharacterized protein LOC105434471 [Cucumis sativus]	[more]
gi\|659071654\|ref\|XP_008461249.1\|	1.3e-131	98.76	PREDICTED: putative protein TPRXL [Cucumis melo]	[more]
gi\|1009113353\|ref\|XP_015873022.1\|	2.1e-70	58.91	PREDICTED: uncharacterized protein LOC107410124 isoform X1 [Ziziphus jujuba]	[more]
gi\|1009113355\|ref\|XP_015873027.1\|	2.2e-67	57.75	PREDICTED: uncharacterized protein LOC107410124 isoform X2 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007608	Senescence_reg_S40

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU087860	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G165750.1	Csa1G165750.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU087860	CU087860	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 45..241 score: 2.7
None	No IPR available	PANTHER	PTHR33083	FAMILY NOT NAMED	coord: 126..241 score: 2.5E-63coord: 35..76 score: 2.5
None	No IPR available	PANTHER	PTHR33083:SF16	SUBFAMILY NOT NAMED	coord: 35..76 score: 2.5E-63coord: 126..241 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G165750	Cla017672	Watermelon (97103) v1	cuwmB007
Csa1G165750	Cla003044	Watermelon (97103) v1	cuwmB042
Csa1G165750	MELO3C004692	Melon (DHL92) v3.5.1	cumeB015
Csa1G165750	MELO3C009492	Melon (DHL92) v3.5.1	cumeB068
Csa1G165750	ClCG10G018740	Watermelon (Charleston Gray)	cuwcgB006
Csa1G165750	ClCG01G012080	Watermelon (Charleston Gray)	cuwcgB016
Csa1G165750	Lsi03G001280	Bottle gourd (USVL1VR-Ls)	culsiB046
Csa1G165750	MELO3C004692.2	Melon (DHL92) v3.6.1	cumedB010
Csa1G165750	MELO3C009492.2	Melon (DHL92) v3.6.1	cumedB061
Csa1G165750	Cla97C10G201780	Watermelon (97103) v2	cuwmbB018
Csa1G165750	Cla97C01G011480	Watermelon (97103) v2	cuwmbB007
Csa1G165750	Bhi08G000036	Wax gourd	cuwgoB049
Csa1G165750	CSPI03G35130	Wild cucumber (PI 183967)	cpicuB104
Csa1G165750	CSPI01G14840	Wild cucumber (PI 183967)	cpicuB000
Csa1G165750	Cucsa.241360	Cucumber (Gy14) v1	cgycuB342
Csa1G165750	Cucsa.319820	Cucumber (Gy14) v1	cgycuB457
Csa1G165750	CmoCh18G006730	Cucurbita moschata (Rifu)	cmocuB383
Csa1G165750	Cp4.1LG08g10040	Cucurbita pepo (Zucchini)	cpecuB848
Csa1G165750	Cp4.1LG09g05520	Cucurbita pepo (Zucchini)	cpecuB020
Csa1G165750	CsGy1G014670	Cucumber (Gy14) v2	cgybcuB001

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Csa1G165750	Csa3G777630	Cucumber (Chinese Long) v2	cucuB016

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G165750	Watermelon (97103) v2	cuwmbB009
Csa1G165750	Watermelon (97103) v2	cuwmbB026
Csa1G165750	Cucurbita maxima (Rimu)	cmacuB399
Csa1G165750	Cucurbita maxima (Rimu)	cmacuB579
Csa1G165750	Cucurbita moschata (Rifu)	cmocuB569
Csa1G165750	Watermelon (Charleston Gray)	cuwcgB028
Csa1G165750	Watermelon (97103) v1	cuwmB057
Csa1G165750	Watermelon (97103) v1	cuwmB065
Csa1G165750	Bottle gourd (USVL1VR-Ls)	culsiB005
Csa1G165750	Bottle gourd (USVL1VR-Ls)	culsiB021
Csa1G165750	Melon (DHL92) v3.6.1	cumedB078
Csa1G165750	Silver-seed gourd	carcuB0000
Csa1G165750	Silver-seed gourd	carcuB0931