CmoCh18G002240 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh18G002240
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	MADS-box transcription factor 6
Location	Cmo_Chr18 : 1462698 .. 1464779 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGAGCCTCATAGTTTTATCTATTTTTGTAATAAAAAAATAAATAAATAAAATAAAAGAATGGGAAGAGGCAAAGTTGAGGTGAAGAGAATTGAAAATCCGACAAGTCGGCAAGTGAGCTTCTCGAAACGTCGGAATGGCGTTTTGAAGAAAGCTTATGAGCTGGCCGTTCTCTGCGACGCCGAGGTCGCCGTCGTCATCTTTTCCCCCTCCGGCAAGGCCTACCAGTTCTCCAGCCATGAGTTCCTACTTCTTTTTCTCTTTTATTTATTTATTTATTCATCTTTGTATTTCCGAGTTTTATTATTAGATACAAAATTGAAATATATTTACGCTCGGTGTGTGTTTGGTTTAATTTTGCGACAGCATAGACGGAACCCTAGTTAGGTACAGAAAGTACGTCGGCCAATCACAATTCAACCATCCGCTTTCACGAGCTCTGGTATTTCATTAGTTAATTGATTATATATTTTGATTTGGGTTAGGGTGGTTTGAAAAATTCGATGATACTAACAGCCCTTTGGATTTCGTTCAAATAAATGAAAGTTTTTATGGGTTACGAGATACTCCTGGAATTCACGATTATGTCTAGGTTTGCATTAGAAATGATCGAGATGGAAAAAAAAAGAACCCTCTGTTTCATCAAGGGTCTTCTCGGAGACATCCAAGAGTTAGTGGCAGCCCACTTTATAACCGCTTCAACTTTGACCGAGTCTACTGATATACCTTCTTTTGTCTCTTGGATGTTTGAAGATCGATGATGAAATAAAGGGTTATTTTCTTCTTTATGTCGACCATGTTGTTGCAAATTTGGAAAGCATGGGGAACTCCAGGTCGTATCGTACTACTCTATCGTCTTATATCGTTGTTTAGCGCTCAGGAATGTCTTTTGGTTTTTTATACAATTATATATGACATATTTTTATTTTTACTTTAATTCAATATTTAAAAATAAATAAATTGATATTTTAGGTATTAACATTTTACCTTATTTGCGAATCAACTCAATTCAAATATTTTATGATTGGGGTAGGTTCGGTTTATTATTTAGTAATAACCCGAATAAATGGGTTGAATCTAATGCCCTAATCCGACCCGACCCAGCTCATAAACGCCCTGTATAGTTTGAAAAATGTTGAATTCAAGAGCTTAAAGCCCTAGAAACCCAATCCGACCCAACTCATAAACACTTGTATAAGCTTAAAGTCCTAGAAACCCGACCCGACCCAACTCATAAAAGTTCATTATTATTGAATTGTAGGTTTGGAAGAGTGAGATGGAGGACATGAACAGAACAATAAGCAGCTTAGAGGCAAGATTAAGGTACATTTAAATTTAATTTATAATATTTAACTATTTCTCTTTATTAAAAAAATAATAATAATAATAAATTACAGGCATTTTTCGGGTGAGGATCTCGAACCGTTGACAATTAAGGAGTTAAAACGGTTAGAAAGACAACTAAGCGTCGGAATCGAACGTGTTCGCTCTAAAATGGTAAATAGCAGCTAATAAATCCTAAAATTAAATAATTTAAAATTTTATTAAACATTTTTTAAATTTTATTTTCGACAGAGACGAATTATATCAGAACATACAAGTCAGCTCAAGAAGAAGGTAAAATCATCGATTTTTACTGCAAGATTTTTATCCGTTATTGTTAAAATTTAACTGTTGGGTTAAATTAAAATTTACTGCAGTATAAGGGCCTGCAAGAGGAGCATAGCCGTCTGCAGAAGAGAGTAAAAATTTTCCAAAATTTACCTCTAGAATTAATTTTACCGTTTATTTATTATTTATTATTTATTTAATGTTTTATGTATTTTCAGCTGAACCAGCTTAAGGATGTGGCTGACACGACCACAAGAGTCTCAGATGCTGATGGTGTCTCTGTACTTGAAATGTTTGTATAACTAAATATAAATATAATCTTAATTTCGTCTTTAACAATTATTAAAGACGGTTTGAGTTCCACGATAAACATATATATGTAACAATTCAAGATCACCGCTGGTGAATATTATTCTCTTTAGACTTTTCCTTTCGGGCTTCCTCTGAAATTTTTTAAAATGAACGTTTCCAT

mRNA sequence

CTGAGCCTCATAGTTTTATCTATTTTTGTAATAAAAAAATAAATAAATAAAATAAAAGAATGGGAAGAGGCAAAGTTGAGGTGAAGAGAATTGAAAATCCGACAAGTCGGCAAGTGAGCTTCTCGAAACGTCGGAATGGCGTTTTGAAGAAAGCTTATGAGCTGGCCGTTCTCTGCGACGCCGAGGTCGCCGTCGTCATCTTTTCCCCCTCCGGCAAGGCCTACCAGTTCTCCAGCCATGACATAGACGGAACCCTAGTTAGGTACAGAAAGTACGTCGGCCAATCACAATTCAACCATCCGCTTTCACGAGCTCTGGTTTGGAAGAGTGAGATGGAGGACATGAACAGAACAATAAGCAGCTTAGAGGCAAGATTAAGGCATTTTTCGGGTGAGGATCTCGAACCGTTGACAATTAAGGAGTTAAAACGGTTAGAAAGACAACTAAGCGTCGGAATCGAACGTGTTCGCTCTAAAATGAGACGAATTATATCAGAACATACAAGTCAGCTCAAGAAGAAGTATAAGGGCCTGCAAGAGGAGCATAGCCGTCTGCAGAAGAGACTGAACCAGCTTAAGGATGTGGCTGACACGACCACAAGAGTCTCAGATGCTGATGGTGTCTCTGTACTTGAAATGTTTGTATAACTAAATATAAATATAATCTTAATTTCGTCTTTAACAATTATTAAAGACGGTTTGAGTTCCACGATAAACATATATATGTAACAATTCAAGATCACCGCTGGTGAATATTATTCTCTTTAGACTTTTCCTTTCGGGCTTCCTCTGAAATTTTTTAAAATGAACGTTTCCAT

Coding sequence (CDS)

ATGGGAAGAGGCAAAGTTGAGGTGAAGAGAATTGAAAATCCGACAAGTCGGCAAGTGAGCTTCTCGAAACGTCGGAATGGCGTTTTGAAGAAAGCTTATGAGCTGGCCGTTCTCTGCGACGCCGAGGTCGCCGTCGTCATCTTTTCCCCCTCCGGCAAGGCCTACCAGTTCTCCAGCCATGACATAGACGGAACCCTAGTTAGGTACAGAAAGTACGTCGGCCAATCACAATTCAACCATCCGCTTTCACGAGCTCTGGTTTGGAAGAGTGAGATGGAGGACATGAACAGAACAATAAGCAGCTTAGAGGCAAGATTAAGGCATTTTTCGGGTGAGGATCTCGAACCGTTGACAATTAAGGAGTTAAAACGGTTAGAAAGACAACTAAGCGTCGGAATCGAACGTGTTCGCTCTAAAATGAGACGAATTATATCAGAACATACAAGTCAGCTCAAGAAGAAGTATAAGGGCCTGCAAGAGGAGCATAGCCGTCTGCAGAAGAGACTGAACCAGCTTAAGGATGTGGCTGACACGACCACAAGAGTCTCAGATGCTGATGGTGTCTCTGTACTTGAAATGTTTGTATAA

Homology

[Close]

BLAST of CmoCh18G002240 vs. Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.5e-34
Identity = 80/170 (47.06%), Postives = 114/170 (67.06%), Query Frame = 1


Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRG+VE+KRIEN  +RQV+FSKRRNG+LKKAYEL+VLCDAEVA++IFS  GK Y+F S 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  DIDGTLVRYRKYVGQSQ-FNHPLSRALVWKSEMEDMNRTISSLEARLRHFSGEDLEPLTI 120
            I  TL RY+     +Q  N+ LS    W  EM  +     +L+   RH  GEDL PL++
Sbjct: 61  GITKTLERYQHCCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSV 120

Query: 121 KELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRL 170
           KEL++LE+QL   + + R +  +++ E   +L++K + L E + +L+ +L
Sbjct: 121 KELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKL 170

[Close]

BLAST of CmoCh18G002240 vs. Swiss-Prot
Match: MAD17_ORYSJ (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 SV=2)

HSP 1 Score: 143.7 bits (361), Expect = 2.2e-33
Identity = 80/188 (42.55%), Postives = 118/188 (62.77%), Query Frame = 1


Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRG+VE+KRIEN  +RQV+FSKRRNG+LKKAYEL+VLCDAEVA++IFS  GK Y+F S 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  DIDGTLVRYRKYVGQSQFNHPL---SRALVWKSEMEDMNRTISSLEARLRHFSGEDLEPL 120
            I+ TL +Y      +Q ++          W  EM  +   +  L+   RH  GEDL PL
Sbjct: 61  GINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPL 120

Query: 121 TIKELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVAD 180
           +IKEL++LE+QL   + + R +  +I+ E    L++K + L E + +L+ +L    D ++
Sbjct: 121 SIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKLEAEADSSN 180

Query: 181 TTTRVSDA 186
             + + D+
Sbjct: 181 CRSAIQDS 188

[Close]

BLAST of CmoCh18G002240 vs. Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3)

HSP 1 Score: 141.7 bits (356), Expect = 8.3e-33
Identity = 76/183 (41.53%), Postives = 122/183 (66.67%), Query Frame = 1


Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRG+VE+KRIEN  +RQV+FSKRR G+LKKA E++VLCDAEV++++FS  GK +++SS 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSE 60

Query: 61  D-IDGTLVRYRKY-VGQSQFNHPLSRALV---WKSEMEDMNRTISSLEARLRHFSGEDLE 120
             ++  L RY +Y   + Q   P S       W  E   +   I  LE   RH+ GE+LE
Sbjct: 61  SCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELE 120

Query: 121 PLTIKELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDV 179
           P+++K+L+ LE+QL   ++ +RS+  ++++E  + L++K K +QEE+S L K++ + +++
Sbjct: 121 PMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENI 180

[Close]

BLAST of CmoCh18G002240 vs. Swiss-Prot
Match: CAL_BRARC (Transcription factor CAULIFLOWER OS=Brassica rapa subsp. chinensis GN=CAL PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.1e-32
Identity = 77/189 (40.74%), Postives = 121/189 (64.02%), Query Frame = 1


Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRG+VE+KRIEN  +RQV+FSKRR G+LKKA+E+++LCDAEV++++FS  GK +++SS 
Sbjct: 1   MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFEYSSE 60

Query: 61  D-IDGTLVRYRKY-VGQSQFNHPLSRALV---WKSEMEDMNRTISSLEARLRHFSGEDLE 120
             ++  L RY +Y   + Q   P S       W  E   +   I  LE   RH+ GEDLE
Sbjct: 61  SCMEKVLERYERYSYAEKQLKAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEDLE 120

Query: 121 PLTIKELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDV 180
            ++IKEL+ LE+QL   ++ +RS+  +++ E  + L++K K + EE+S L K++ + + +
Sbjct: 121 SISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEILEENSMLTKQIKERESI 180

Query: 181 ADTTTRVSD 185
             T    S+
Sbjct: 181 LRTHQNQSE 189

[Close]

BLAST of CmoCh18G002240 vs. Swiss-Prot
Match: CAL_BRARP (Transcription factor CAULIFLOWER OS=Brassica rapa subsp. pekinensis GN=CAL PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.1e-32
Identity = 77/189 (40.74%), Postives = 121/189 (64.02%), Query Frame = 1


Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRG+VE+KRIEN  +RQV+FSKRR G+LKKA+E+++LCDAEV++++FS  GK +++SS 
Sbjct: 1   MGRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFEYSSE 60

Query: 61  D-IDGTLVRYRKY-VGQSQFNHPLSRALV---WKSEMEDMNRTISSLEARLRHFSGEDLE 120
             ++  L RY +Y   + Q   P S       W  E   +   I  LE   RH+ GEDLE
Sbjct: 61  SCMEKVLERYERYSYAEKQLKAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEDLE 120

Query: 121 PLTIKELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDV 180
            ++IKEL+ LE+QL   ++ +RS+  +++ E  + L++K K + EE+S L K++ + + +
Sbjct: 121 SISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEILEENSMLTKQIKERESI 180

Query: 181 ADTTTRVSD 185
             T    S+
Sbjct: 181 LRTHQNQSE 189

[Close]

BLAST of CmoCh18G002240 vs. TrEMBL
Match: Q9AYR8_CUCSA (Putative MADS-box protein OS=Cucumis sativus GN=ERAF17 PE=2 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 3.6e-75
Identity = 150/194 (77.32%), Postives = 173/194 (89.18%), Query Frame = 1


Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRGKVE+KRIENPTSRQV+FSKRRNG+LKKAYEL+VLCDA+VA++IFSPSGKAYQFSSH
Sbjct: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAQVALLIFSPSGKAYQFSSH 60

Query: 61  DIDGTLVRYRKYVGQSQFNHPLSRALVWKSEMEDMNRTISSLEARLRHFSGEDLEPLTIK 120
           D+DGTL RYR  VG  Q NHP SRAL WK+EM+DM R+ISS+EARLRHF GEDLEPL +K
Sbjct: 61  DMDGTLARYRTDVGLPQSNHPHSRALFWKTEMDDMKRSISSMEARLRHFVGEDLEPLNVK 120

Query: 121 ELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADT-T 180
           ELK+LERQ+SVGIER+RSK RRII+EH + LK+KYKGLQEEHSRLQKRLNQLKDV  T +
Sbjct: 121 ELKQLERQMSVGIERIRSKKRRIIAEHINLLKRKYKGLQEEHSRLQKRLNQLKDVVVTNS 180

Query: 181 TRVSDADGVSVLEM 194
           +R SDA+  S LE+
Sbjct: 181 SRNSDANPASALEI 194

[Close]

BLAST of CmoCh18G002240 vs. TrEMBL
Match: Q9M3U2_CUCSA (Putative transcription factor (Fragment) OS=Cucumis sativus GN=cus3 PE=2 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 2.0e-73
Identity = 147/191 (76.96%), Postives = 170/191 (89.01%), Query Frame = 1


Query: 4   GKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSHDID 63
           GKVE+KRIENPTSRQV+FSKRRNG+LKKAYEL+VLCDA+VA++IFSPSGKAYQFSSHD+D
Sbjct: 1   GKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAQVALLIFSPSGKAYQFSSHDMD 60

Query: 64  GTLVRYRKYVGQSQFNHPLSRALVWKSEMEDMNRTISSLEARLRHFSGEDLEPLTIKELK 123
           GTL RYR  VG  Q NHP SRAL WK+EM+DM R+ISS+EARLRHF GEDLEPL +KELK
Sbjct: 61  GTLARYRTDVGLPQSNHPHSRALFWKTEMDDMKRSISSMEARLRHFVGEDLEPLNVKELK 120

Query: 124 RLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADT-TTRV 183
           +LERQ+SVGIER+RSK RRII+EH + LK+KYKGLQEEHSRLQKRLNQLKDV  T ++R 
Sbjct: 121 QLERQMSVGIERIRSKKRRIIAEHINLLKRKYKGLQEEHSRLQKRLNQLKDVVVTNSSRN 180

Query: 184 SDADGVSVLEM 194
           SDA+  S LE+
Sbjct: 181 SDANPASALEI 191

[Close]

BLAST of CmoCh18G002240 vs. TrEMBL
Match: Q0JRW1_9LAMI (Deficiens H7 homologue OS=Misopates orontium GN=defh7 PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 5.4e-55
Identity = 112/195 (57.44%), Postives = 157/195 (80.51%), Query Frame = 1


Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRGKVE+KRIENPT+RQV+FSKRRNG+LKKA+EL+VLCDAEVAV+IFSPSGKAYQ++SH
Sbjct: 1   MGRGKVELKRIENPTNRQVTFSKRRNGLLKKAFELSVLCDAEVAVLIFSPSGKAYQYASH 60

Query: 61  DIDGTLVRYRKYVGQSQ-FNHPLSRALVWKSEMEDMNRTISSLEARLRHFSGEDLEPLTI 120
           D   T+ RY+  VG ++  +  ++   VW++E++D+ RT+ +LEAR  HFSGE+L  L +
Sbjct: 61  DTHRTIARYKSEVGLAKPGDQGITSMEVWRNEIDDLKRTVDALEARDMHFSGENLSGLGM 120

Query: 121 KELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADTT 180
           K+LK+LERQ+ +G+ER+RSK RRII+EH + LKK++K LQEE++ LQKRL++++    + 
Sbjct: 121 KDLKQLERQIRIGVERIRSKKRRIITEHITYLKKRHKDLQEENNNLQKRLHEIQAANTSC 180

Query: 181 TRVSDADGVSVLEMF 195
           + +SD+DG  V   F
Sbjct: 181 SIISDSDGTRVFPGF 195

[Close]

BLAST of CmoCh18G002240 vs. TrEMBL
Match: A0A067JIE7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26434 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 7.7e-54
Identity = 109/175 (62.29%), Postives = 144/175 (82.29%), Query Frame = 1


Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRGKVE+KRIENPT+RQV+FSKRRNG+LKKA+EL++LCDAEV +++FSPSGKAYQF+SH
Sbjct: 1   MGRGKVELKRIENPTNRQVTFSKRRNGLLKKAFELSILCDAEVCLLVFSPSGKAYQFASH 60

Query: 61  DIDGTLVRYRKYVGQSQFNHPLSRAL-VWKSEMEDMNRTISSLEARLRHFSGEDLEPLTI 120
           D+D T+ RYR  VG    N   SR+L  W++E+E++ RT+ + E ++RHF GED+  L +
Sbjct: 61  DMDRTIARYRSEVGLLGSNDQRSRSLEYWRNEIEELKRTMDATETKIRHFCGEDISKLGM 120

Query: 121 KELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKD 175
           +ELK+LERQL   IER+RSKM RIISEH S  K+K+K LQEE++RLQKR+++L D
Sbjct: 121 RELKQLERQLRTAIERIRSKMSRIISEHMSLEKRKHKALQEENARLQKRIHELND 175

[Close]

BLAST of CmoCh18G002240 vs. TrEMBL
Match: A7Y7W6_POPDE (MADS-box protein OS=Populus deltoides GN=MADS1 PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.7e-53
Identity = 111/185 (60.00%), Postives = 150/185 (81.08%), Query Frame = 1


Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRGKVE+KRIEN  SRQV+FSKRRNG+LKKA+EL++LC+AEV+++IFSPSGK YQFSSH
Sbjct: 1   MGRGKVELKRIENSASRQVTFSKRRNGLLKKAFELSILCEAEVSLIIFSPSGKFYQFSSH 60

Query: 61  DIDGTLVRYRKYVGQSQFNHPLSRAL-VWKSEMEDMNRTISSLEARLRHFSGEDLEPLTI 120
           D++ ++ RYR  VG    N   SR+L  W+SE+E++ RTI+  EA+LRHF GED+ PL +
Sbjct: 61  DMERSVARYRSEVGLPGTNDQRSRSLEFWRSEIEELRRTINKTEAQLRHFIGEDIAPLGL 120

Query: 121 KELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADTT 180
           KELK+LERQL  G+ER+RSK +R+ISEH   LK + + LQEE++RLQKRL++L D A+ +
Sbjct: 121 KELKQLERQLKTGVERIRSKKKRVISEHIKLLKSEQRALQEENARLQKRLHELPD-ANVS 180

Query: 181 TRVSD 185
           +R+ +
Sbjct: 181 SRIPE 184

[Close]

BLAST of CmoCh18G002240 vs. TAIR10
Match: AT1G26310.1 (AT1G26310.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 141.7 bits (356), Expect = 4.7e-34
Identity = 76/183 (41.53%), Postives = 122/183 (66.67%), Query Frame = 1


Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRG+VE+KRIEN  +RQV+FSKRR G+LKKA E++VLCDAEV++++FS  GK +++SS 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSE 60

Query: 61  D-IDGTLVRYRKY-VGQSQFNHPLSRALV---WKSEMEDMNRTISSLEARLRHFSGEDLE 120
             ++  L RY +Y   + Q   P S       W  E   +   I  LE   RH+ GE+LE
Sbjct: 61  SCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELE 120

Query: 121 PLTIKELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDV 179
           P+++K+L+ LE+QL   ++ +RS+  ++++E  + L++K K +QEE+S L K++ + +++
Sbjct: 121 PMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENI 180

[Close]

BLAST of CmoCh18G002240 vs. TAIR10
Match: AT2G45660.1 (AT2G45660.1 AGAMOUS-like 20)

HSP 1 Score: 136.3 bits (342), Expect = 2.0e-32
Identity = 74/170 (43.53%), Postives = 113/170 (66.47%), Query Frame = 1


Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           M RGK ++KRIEN TSRQV+FSKRRNG+LKKA+EL+VLCDAEV+++IFSP GK Y+F+S 
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60

Query: 61  DIDGTLVRYRKYVGQSQFNHPLSRALV--WKSEMEDMNRTISSLEARLRHFSGEDLEPLT 120
           ++  T+ RY ++        P+S   +   K E  +M + I  LEA  R   GE +   +
Sbjct: 61  NMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCS 120

Query: 121 IKELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKR 169
           I+EL+++E+QL   ++ +R++  ++  E   QLK+K K L  E+ +L ++
Sbjct: 121 IEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEK 170

[Close]

BLAST of CmoCh18G002240 vs. TAIR10
Match: AT4G11880.1 (AT4G11880.1 AGAMOUS-like 14)

HSP 1 Score: 135.6 bits (340), Expect = 3.3e-32
Identity = 80/170 (47.06%), Postives = 112/170 (65.88%), Query Frame = 1


Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQF-SS 60
           M RGK E+KRIEN TSRQV+FSKRRNG+LKKA+EL+VLCDAEVA++IFSP GK Y+F SS
Sbjct: 1   MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSS 60

Query: 61  HDIDGTLVRYRKYVGQSQFNHPLS-RALVWKSEMEDMNRTISSLEARLRHFSGEDLEPLT 120
             I  T+ RY+K +     NH  +  +   K E   + R I  LE   R   GE L+  +
Sbjct: 61  SSIPKTVERYQKRIQDLGSNHKRNDNSQQSKDETYGLARKIEHLEISTRKMMGEGLDASS 120

Query: 121 IKELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKR 169
           I+EL++LE QL   + ++R+K  +++ E T +LK+K + L  E+  L ++
Sbjct: 121 IEELQQLENQLDRSLMKIRAKKYQLLREETEKLKEKERNLIAENKMLMEK 170

[Close]

BLAST of CmoCh18G002240 vs. TAIR10
Match: AT1G69120.1 (AT1G69120.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 135.6 bits (340), Expect = 3.3e-32
Identity = 74/178 (41.57%), Postives = 119/178 (66.85%), Query Frame = 1


Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRG+V++KRIEN  +RQV+FSKRR G+LKKA+E++VLCDAEVA+V+FS  GK +++S+ 
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60

Query: 61  D-IDGTLVRYRKY-VGQSQFNHPLSRALV-WKSEMEDMNRTISSLEARLRHFSGEDLEPL 120
             ++  L RY +Y   + Q   P S     W  E   +   I  LE   RH+ GEDL+ +
Sbjct: 61  SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAM 120

Query: 121 TIKELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDV 176
           + KEL+ LE+QL   ++ +R++  +++ E  ++L+KK K +QE++S L K++ + + +
Sbjct: 121 SPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKI 178

[Close]

BLAST of CmoCh18G002240 vs. TAIR10
Match: AT3G57230.1 (AT3G57230.1 AGAMOUS-like 16)

HSP 1 Score: 135.6 bits (340), Expect = 3.3e-32
Identity = 77/192 (40.10%), Postives = 117/192 (60.94%), Query Frame = 1


Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRGK+ +KRI N TSRQV+FSKRRNG+LKKA ELA+LCDAEV V+IFS +G+ Y FSS 
Sbjct: 1   MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60

Query: 61  DIDGTLVRYRKYVGQ-SQFNHPLSRALVWKSEMEDMNRTISSLEARLRHFSGEDLEPLTI 120
            +   + RY    G+ S  N P S    W+ E   + R + +L+   R   GE+L  L++
Sbjct: 61  SMKSVIERYSDAKGETSSENDPASEIQFWQKEAAILKRQLHNLQENHRQMMGEELSGLSV 120

Query: 121 KELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQL-KDVADT 180
           + L+ LE QL + +  VR K  +++ E    L ++   + +E+  L K++N + +   + 
Sbjct: 121 EALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKKVNLMHQQNMEL 180

Query: 181 TTRVSDADGVSV 191
             +VS+ +GV +
Sbjct: 181 HEKVSEVEGVKI 192

[Close]

BLAST of CmoCh18G002240 vs. NCBI nr
Match: gi|449454816|ref|XP_004145150.1| (PREDICTED: truncated transcription factor CAULIFLOWER D-like isoform X2 [Cucumis sativus])

HSP 1 Score: 289.3 bits (739), Expect = 5.1e-75
Identity = 150/194 (77.32%), Postives = 173/194 (89.18%), Query Frame = 1


Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRGKVE+KRIENPTSRQV+FSKRRNG+LKKAYEL+VLCDA+VA++IFSPSGKAYQFSSH
Sbjct: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAQVALLIFSPSGKAYQFSSH 60

Query: 61  DIDGTLVRYRKYVGQSQFNHPLSRALVWKSEMEDMNRTISSLEARLRHFSGEDLEPLTIK 120
           D+DGTL RYR  VG  Q NHP SRAL WK+EM+DM R+ISS+EARLRHF GEDLEPL +K
Sbjct: 61  DMDGTLARYRTDVGLPQSNHPHSRALFWKTEMDDMKRSISSMEARLRHFVGEDLEPLNVK 120

Query: 121 ELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADT-T 180
           ELK+LERQ+SVGIER+RSK RRII+EH + LK+KYKGLQEEHSRLQKRLNQLKDV  T +
Sbjct: 121 ELKQLERQMSVGIERIRSKKRRIIAEHINLLKRKYKGLQEEHSRLQKRLNQLKDVVVTNS 180

Query: 181 TRVSDADGVSVLEM 194
           +R SDA+  S LE+
Sbjct: 181 SRNSDANPASALEI 194

[Close]

BLAST of CmoCh18G002240 vs. NCBI nr
Match: gi|778658160|ref|XP_011652201.1| (PREDICTED: truncated transcription factor CAULIFLOWER D-like isoform X1 [Cucumis sativus])

HSP 1 Score: 289.3 bits (739), Expect = 5.1e-75
Identity = 150/194 (77.32%), Postives = 173/194 (89.18%), Query Frame = 1


Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRGKVE+KRIENPTSRQV+FSKRRNG+LKKAYEL+VLCDA+VA++IFSPSGKAYQFSSH
Sbjct: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAQVALLIFSPSGKAYQFSSH 60

Query: 61  DIDGTLVRYRKYVGQSQFNHPLSRALVWKSEMEDMNRTISSLEARLRHFSGEDLEPLTIK 120
           D+DGTL RYR  VG  Q NHP SRAL WK+EM+DM R+ISS+EARLRHF GEDLEPL +K
Sbjct: 61  DMDGTLARYRTDVGLPQSNHPHSRALFWKTEMDDMKRSISSMEARLRHFVGEDLEPLNVK 120

Query: 121 ELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADT-T 180
           ELK+LERQ+SVGIER+RSK RRII+EH + LK+KYKGLQEEHSRLQKRLNQLKDV  T +
Sbjct: 121 ELKQLERQMSVGIERIRSKKRRIIAEHINLLKRKYKGLQEEHSRLQKRLNQLKDVVVTNS 180

Query: 181 TRVSDADGVSVLEM 194
           +R SDA+  S LE+
Sbjct: 181 SRNSDANPASALEI 194

[Close]

BLAST of CmoCh18G002240 vs. NCBI nr
Match: gi|8216957|emb|CAB92396.1| (putative transcription factor [Cucumis sativus])

HSP 1 Score: 283.5 bits (724), Expect = 2.8e-73
Identity = 147/191 (76.96%), Postives = 170/191 (89.01%), Query Frame = 1


Query: 4   GKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSHDID 63
           GKVE+KRIENPTSRQV+FSKRRNG+LKKAYEL+VLCDA+VA++IFSPSGKAYQFSSHD+D
Sbjct: 1   GKVELKRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAQVALLIFSPSGKAYQFSSHDMD 60

Query: 64  GTLVRYRKYVGQSQFNHPLSRALVWKSEMEDMNRTISSLEARLRHFSGEDLEPLTIKELK 123
           GTL RYR  VG  Q NHP SRAL WK+EM+DM R+ISS+EARLRHF GEDLEPL +KELK
Sbjct: 61  GTLARYRTDVGLPQSNHPHSRALFWKTEMDDMKRSISSMEARLRHFVGEDLEPLNVKELK 120

Query: 124 RLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADT-TTRV 183
           +LERQ+SVGIER+RSK RRII+EH + LK+KYKGLQEEHSRLQKRLNQLKDV  T ++R 
Sbjct: 121 QLERQMSVGIERIRSKKRRIIAEHINLLKRKYKGLQEEHSRLQKRLNQLKDVVVTNSSRN 180

Query: 184 SDADGVSVLEM 194
           SDA+  S LE+
Sbjct: 181 SDANPASALEI 191

[Close]

BLAST of CmoCh18G002240 vs. NCBI nr
Match: gi|1000984721|ref|XP_015579361.1| (PREDICTED: truncated transcription factor CAULIFLOWER A [Ricinus communis])

HSP 1 Score: 223.0 bits (567), Expect = 4.5e-55
Identity = 112/175 (64.00%), Postives = 148/175 (84.57%), Query Frame = 1


Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRGKVE+KRIENPTSRQV+FSKRRNG+LKKA+EL++LCDAEV ++IFSP+G+AYQFSSH
Sbjct: 1   MGRGKVELKRIENPTSRQVTFSKRRNGLLKKAFELSILCDAEVCLLIFSPTGRAYQFSSH 60

Query: 61  DIDGTLVRYRKYVGQSQFNHPLSRAL-VWKSEMEDMNRTISSLEARLRHFSGEDLEPLTI 120
           ++D T+ RYR  VG        +R+L  W++E+E++ RTI ++E RL+HFSGED+  L +
Sbjct: 61  EMDRTIARYRSEVGLLGSTDLRTRSLEYWRNEIEELKRTIDTMETRLKHFSGEDISVLGM 120

Query: 121 KELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKD 175
           KELK+LER L VG+ER+RSK RRIISEH + LK+K+K LQEE++RLQKRL++L+D
Sbjct: 121 KELKQLERHLKVGVERIRSKKRRIISEHINSLKRKHKVLQEENNRLQKRLHELQD 175

[Close]

BLAST of CmoCh18G002240 vs. NCBI nr
Match: gi|113207067|emb|CAL36573.1| (deficiens H7 homologue [Misopates orontium])

HSP 1 Score: 222.2 bits (565), Expect = 7.7e-55
Identity = 112/195 (57.44%), Postives = 157/195 (80.51%), Query Frame = 1


Query: 1   MGRGKVEVKRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSSH 60
           MGRGKVE+KRIENPT+RQV+FSKRRNG+LKKA+EL+VLCDAEVAV+IFSPSGKAYQ++SH
Sbjct: 1   MGRGKVELKRIENPTNRQVTFSKRRNGLLKKAFELSVLCDAEVAVLIFSPSGKAYQYASH 60

Query: 61  DIDGTLVRYRKYVGQSQ-FNHPLSRALVWKSEMEDMNRTISSLEARLRHFSGEDLEPLTI 120
           D   T+ RY+  VG ++  +  ++   VW++E++D+ RT+ +LEAR  HFSGE+L  L +
Sbjct: 61  DTHRTIARYKSEVGLAKPGDQGITSMEVWRNEIDDLKRTVDALEARDMHFSGENLSGLGM 120

Query: 121 KELKRLERQLSVGIERVRSKMRRIISEHTSQLKKKYKGLQEEHSRLQKRLNQLKDVADTT 180
           K+LK+LERQ+ +G+ER+RSK RRII+EH + LKK++K LQEE++ LQKRL++++    + 
Sbjct: 121 KDLKQLERQIRIGVERIRSKKRRIITEHITYLKKRHKDLQEENNNLQKRLHEIQAANTSC 180

Query: 181 TRVSDADGVSVLEMF 195
           + +SD+DG  V   F
Sbjct: 181 SIISDSDGTRVFPGF 195

The following BLAST results are available for this feature:

BLAST of CmoCh18G002240 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MADS6_ORYSJ	1.5e-34	47.06	MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV...	[more]
MAD17_ORYSJ	2.2e-33	42.55	MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 ...	[more]
CAL_ARATH	8.3e-33	41.53	Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3	[more]
CAL_BRARC	3.1e-32	40.74	Transcription factor CAULIFLOWER OS=Brassica rapa subsp. chinensis GN=CAL PE=2 S...	[more]
CAL_BRARP	3.1e-32	40.74	Transcription factor CAULIFLOWER OS=Brassica rapa subsp. pekinensis GN=CAL PE=2 ...	[more]

BLAST of CmoCh18G002240 vs. TrEMBL


Match Name	E-value	Identity	Description
Q9AYR8_CUCSA	3.6e-75	77.32	Putative MADS-box protein OS=Cucumis sativus GN=ERAF17 PE=2 SV=1	[more]
Q9M3U2_CUCSA	2.0e-73	76.96	Putative transcription factor (Fragment) OS=Cucumis sativus GN=cus3 PE=2 SV=1	[more]
Q0JRW1_9LAMI	5.4e-55	57.44	Deficiens H7 homologue OS=Misopates orontium GN=defh7 PE=2 SV=1	[more]
A0A067JIE7_JATCU	7.7e-54	62.29	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26434 PE=4 SV=1	[more]
A7Y7W6_POPDE	1.7e-53	60.00	MADS-box protein OS=Populus deltoides GN=MADS1 PE=2 SV=1	[more]

BLAST of CmoCh18G002240 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G26310.1	4.7e-34	41.53	K-box region and MADS-box transcription factor family protein	[more]
AT2G45660.1	2.0e-32	43.53	AGAMOUS-like 20	[more]
AT4G11880.1	3.3e-32	47.06	AGAMOUS-like 14	[more]
AT1G69120.1	3.3e-32	41.57	K-box region and MADS-box transcription factor family protein	[more]
AT3G57230.1	3.3e-32	40.10	AGAMOUS-like 16	[more]

BLAST of CmoCh18G002240 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449454816\|ref\|XP_004145150.1\|	5.1e-75	77.32	PREDICTED: truncated transcription factor CAULIFLOWER D-like isoform X2 [Cucumis...	[more]
gi\|778658160\|ref\|XP_011652201.1\|	5.1e-75	77.32	PREDICTED: truncated transcription factor CAULIFLOWER D-like isoform X1 [Cucumis...	[more]
gi\|8216957\|emb\|CAB92396.1\|	2.8e-73	76.96	putative transcription factor [Cucumis sativus]	[more]
gi\|1000984721\|ref\|XP_015579361.1\|	4.5e-55	64.00	PREDICTED: truncated transcription factor CAULIFLOWER A [Ricinus communis]	[more]
gi\|113207067\|emb\|CAL36573.1\|	7.7e-55	57.44	deficiens H7 homologue [Misopates orontium]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002100	TF_MADSbox
IPR002487	TF_Kbox

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0046983	protein dimerization activity
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription from RNA polymerase II promoter
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G002240.1	CmoCh18G002240.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 38..59 score: 1.1E-28coord: 3..23 score: 1.1E-28coord: 23..38 score: 1.1
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 score: 7.3
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 score: 3.1
IPR002100	Transcription factor, MADS-box	PROFILE	PS50066	MADS_BOX_2	coord: 1..61 score: 31
IPR002100	Transcription factor, MADS-box	unknown	SSF55455	SRF-like	coord: 2..88 score: 2.62
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 87..169 score: 1.5
IPR002487	Transcription factor, K-box	PROFILE	PS51297	K_BOX	coord: 85..175 score: 13
None	No IPR available	unknown	Coil	Coil	coord: 148..175 score: -coord: 92..112 scor
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 2..174 score: 4.1
None	No IPR available	PANTHER	PTHR11945:SF234	SUBFAMILY NOT NAMED	coord: 2..174 score: 4.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh18G002240	Cucsa.392160	Cucumber (Gy14) v1	cgycmoB1082
CmoCh18G002240	CmaCh13G008130	Cucurbita maxima (Rimu)	cmacmoB219
CmoCh18G002240	CmaCh18G003120	Cucurbita maxima (Rimu)	cmacmoB409
CmoCh18G002240	Cla002628	Watermelon (97103) v1	cmowmB360
CmoCh18G002240	Csa1G051580	Cucumber (Chinese Long) v2	cmocuB380
CmoCh18G002240	MELO3C002369	Melon (DHL92) v3.5.1	cmomeB356
CmoCh18G002240	ClCG03G003860	Watermelon (Charleston Gray)	cmowcgB350
CmoCh18G002240	CSPI01G09650	Wild cucumber (PI 183967)	cmocpiB383
CmoCh18G002240	Lsi02G005120	Bottle gourd (USVL1VR-Ls)	cmolsiB356
CmoCh18G002240	Cp4.1LG09g09550	Cucurbita pepo (Zucchini)	cmocpeB377
CmoCh18G002240	Cp4.1LG20g03120	Cucurbita pepo (Zucchini)	cmocpeB405
CmoCh18G002240	MELO3C002369.2	Melon (DHL92) v3.6.1	cmomedB408
CmoCh18G002240	CsaV3_1G009750	Cucumber (Chinese Long) v3	cmocucB0457
CmoCh18G002240	Cla97C03G054980	Watermelon (97103) v2	cmowmbB394
CmoCh18G002240	Bhi08G001236	Wax gourd	cmowgoB0518
CmoCh18G002240	CsGy1G009690	Cucumber (Gy14) v2	cgybcmoB082
CmoCh18G002240	Carg07608	Silver-seed gourd	carcmoB1350
CmoCh18G002240	Carg06802	Silver-seed gourd	carcmoB0673

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh18G002240	CmoCh13G008430	Cucurbita moschata (Rifu)	cmocmoB166

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh18G002240	Cucumber (Gy14) v1	cgycmoB0435
CmoCh18G002240	Wild cucumber (PI 183967)	cmocpiB396
CmoCh18G002240	Cucumber (Chinese Long) v2	cmocuB393
CmoCh18G002240	Melon (DHL92) v3.5.1	cmomeB363
CmoCh18G002240	Watermelon (Charleston Gray)	cmowcgB366
CmoCh18G002240	Watermelon (97103) v1	cmowmB398
CmoCh18G002240	Cucurbita pepo (Zucchini)	cmocpeB389
CmoCh18G002240	Cucurbita pepo (Zucchini)	cmocpeB410
CmoCh18G002240	Bottle gourd (USVL1VR-Ls)	cmolsiB376
CmoCh18G002240	Cucumber (Gy14) v2	cgybcmoB097
CmoCh18G002240	Melon (DHL92) v3.6.1	cmomedB416
CmoCh18G002240	Silver-seed gourd	carcmoB0500
CmoCh18G002240	Cucumber (Chinese Long) v3	cmocucB0470
CmoCh18G002240	Watermelon (97103) v2	cmowmbB413
CmoCh18G002240	Cucurbita moschata (Rifu)	cmocmoB065
CmoCh18G002240	Cucurbita moschata (Rifu)	cmocmoB101