CmoCh18G000800 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTATCAAAGCATCGATCTTCTTATTTTTAAATATAAAAAATTTCCTCTTGAGTTAAGGTTTGGTTGATACCAAACCCTAACTCAATCAATGAAGCCTTTACAACCGCCGATCATCCATCGCAATAAGTATATTCAAATTTCTCATCAAGCTCAAAGGTAGCATATTCAAGATGTTCGTATTTTCTTTCACAACCTCTCGAGATGTTTGTATTCAAGATGATATATACACTCCTAAACACAAGTTGAGTGTTATTGACTTACACTCTCTATTTTCACTACTGGGAAGACAAAAGTGTTATTAACCTACACTCTCTTGTCAAAGACAAATTGGGTGTTATTGACCTACACTCTCTTCTCAAAGACAACTTGGGTGTTATTGATCTACACTTGTAAAGACAACTTAAGTGTTATTGACCTATACACGTAAAGACAAGTTGAATGTAATTAACATACACCCTCCAACTTGAGGGAGAGTGTTGAGATAAAATATTCGGAGAATATATTATTTATGGAATATATTTTAGATATTATATCTTAATATTATTTTCTTTATAATTTGATTTATAGTATATTTTATTTTATTTTCAATATTTAATTATTTTATATTTTATTTAGTAGTGACTATTTCTATTCTATTTAAAGCGGATGAATATGAATCAGAACAAACCATCAATTTCAATTCTATTTATATTTCTCATTCTTAATATAAATAATAATTTTTTTCTTCAAAAATGCCCATTTAGCTTTAAAAATAATATCTCTCATTCTTTCTCTTATTCTTGTTTATATGATATTAAAAGAAATTAAAATTTAGTCTCTATAATTTTAAAATTTAGAATAATTTTTTATAATTTACTAAAATTAAAATTATAGAAATTATTTATGAAGATAAAAGATTAAATTTTGTCAGTAAATTTGTGAGTTCTATTTATATTAAAATATTTATTTATGAGTTGTATTTTTGGCTTAATTTAGATAAATTATAAAGTTTTGTATTTTATTAAATAATGAAGCTTTGTACTAATTAAATAGTTTCCCGGGTTATAATCAACTCGTCCTTGCTTCCTTGTCGTCTTGCTGCTTCACTATGTTCTTCCGTTGATTTTTTTCACACGAAATCAATTTTGAACATGATTTTTGTTTTCGTCATAAAACAGGAGAAGTTGTTGTTCAAAGCTGACGAAATTGCCTGGAAGCTTGTTCGATGATTCCGCGCTATTTTAATTCCACTTGTTCAATGTCCTGATTCGAATTTTTCTCTTTCCAGAAAATAGAATTTTCGACGTACAAATTCTCCCGTTTCTTTCGATGGAAGTTAGAATTTCAAGGAGGAATTGATTTCATAAATTACAGGTCGATTCTTTGATCTCTTTGTACCGTTGGTCGTTTCTCGGTCGGAAGGCGATTCCGGCCGGTGGCCGCGGACCACGATTTCGAAGTCTTGGTGTTCGAAGCCCTCTCATGAACTCTTTCGAGAAAACGCCTGAAAGGCGCGTACCTCTTTATTCCGATGGCTCTCCCTCTTCTTACGGTAATAATCAATCCCCTCTCGATCTTGGCGCCGCTCTGTTCATCTAAATCGATGGAGATTTCATTTTTGCAGGTAAAGATCATTCAAAATTGGGGCACAAGAAGCAATTAATCAGGAAACGAGGCGGAATTGTATTTCGAATTTACGAGCATGGTAAGGATCGAAAGTTTTTGCTGTCCAAATTTATTGCACACCACCTGTTTGTAGAAATGCCACCTGAAATTTATCGCATATATTATGATTGAATCAGCGTAAACTTTGTGTTTTTTTGTGAATCTGTAGTTAAATTGGGGCCTAAATTCTCGGTTACTGCCAAAGGAAAATTGAGATTAGGGGCAAAAATTATACGACAAGGTGGTAGAAAGAACATATTCAAACATGCTTTTGGGATTGTAGAAGGAGAAGAGCTTTTGAAGGCCTCTCAATGTTACTTATCAACAAGCGCAGGACCCATTGCAGGGCTTCTTTTCATGTCCACACACAGGGTTGCTTTCTGCAGTGAGCAAAGTATCACTTTCCCTTCACCAACTGGAGAACTGATCAAAACTCAGTACAAGGTAACCTTTAGATTTAAGCCTTCAGCTGTGGATCATAGGAGATTGCAAATAAATCATGTTTGATTTGATTTGATTTGATTTGATTTAACCATGTTCATAAGAAAGTTTTGCGTTCAGAAAATGGAATTTAAAGCATCTTTGATAGAAACTTAAAGAACTTTTTGGCTGTTGATTGCAGAAAATGGAAAGTTCTAAAGATTTTAGGATTGGAATTGAACATTCATAGATAGATACAGAATATTTTTGGGTAGTCCTTTTTTTCAAAGAAATCCCCAACTTTTTGTTGGAACAAAGTGATTGAACAAGCTAAAAGTCTCTGGAATTTTTCTGCTTAATACATATCCAGAATTTTGATGAAGGCATCTTTGAAACTTTAAGCACCATGTGATGCAAAAATTTTCGTTCGAATACAATCAAAGCGGCGTATTAGACCCCTGCTTTGAATTCTGACTTTGCCCGGAAAGTGAAACTCTAGCCCGAATAGGGGAGGCGAGAACATCTTTAGCCGTTAAAAAGTTCAAGAATTTCTCGAGAACATCTTTAGCCGTTAAAAAGTTCAAGAATTTCTCGAGAACATCTTTAGCCGTTAAAAAGTTCAAGAATTTCTCGAGAACATCTTTAGCCGTTAAAAAGTTCAAGAATTTCTCGAGAACATCTTTAGCCGTTAAAAAGTTCAAGAATTTCTCGAGAACATCTTTAGCCGTTAAAAAGTTCAAGAATTTCTCGAGAACATCTTTAGCCGTTAAAAAGTTCAAGAATTTCTCGAGAACATCTTTAGCCGTTAAAAAGTTCAAGAATTTCTCGAGAACATCTTTAGCCGTTAAAAAGTTCAAGAATTTCTCGAGAACATCTTTAGCCGTTAAAAAGTTCAAGAATTTCTCGAGCTCCAGCCCGAATAGGGGAGGCGAGAACATTTTTAGCCATTCCAAAAACACTCTCAAACTCCAGCCCGAATAGGGGAGGCGAGAACATTTTTAGCCATTCCAAAAACACTCTCAAACTCCAGCCCGAATAGGGGAGGCGAGAACATTTTTAGCCATTCCAAAAACACTCTCAAACTCCAGCCCGAATAGGGGAGGCGAGAACATTTTTAGCCATTCCAAAAACACTCTCAAACTCCAGCCCGAATAGGGGAGGCGAGAACATTTTTAGCCATTCCAAAAACACTCTCAAACTCCAGCCCGAATAGGGGAGGCGAGAACATGTTTAGCCATTCCAAAAACACTCTCAAACTCCAGCCCGAATAGGGGAGGCGAGAACATTTTTAGCCATTCCAAAAACACTCTCAAACTCCAGCCCGAATAGGGGAGGCGAGAACATTTTTAGCCATTCCAAAAACACTCTCAAACTCCAGCCCGAATAGGGGAGGCGAGAACATTTTTAGCCATTCCAAAAACACTCTCAAACTCCAGCCCGAATAGGGGAGGCGAGAACATCTTTAGCCATTCCAAAAACACTCTCAAACTCCAGCCCGAATAGGGGAGGCGAGAACATCTTTAGCCATTCCAAAAACACTCTCAAACTCCAGCCCGAATAGGGGAGGCGAGAACATTTTTAGCCATTCCAAAAACACTCTCAAACTCCAGCCCGAATAGGGGAGGCGAGAACATTTTTAGCCATTCCAAAAACACTCTCAAACTCCAGCCCGAATAGGGGAGGCGAGAACATTTTTAGCCATTCCAAAAACACTCTCAAACTCCAGCCCGAATAGGGGAGGCGAGAACATTTTTAGCCATTCCAAAAACACTCTCAAACTCCAGCCCGAATAGGGGAGGCGAGAACATTTTTAGCCATTCCAAAAACACTCTCAAACTCCAGCCCGAATAGGGGAGGCGAGAACATTTTTAGCCATTCCAAAAACACTCTCAAACTCCAGCCCGAATAGGGGAGGCGAGAACATCTTTAGCCATTCCAAAAACACTCTCAAACTCCAGCCGGAATAGGGGAGGCGAGAACATCTTTAGCCATTCCAAAAACACTCTCAAACTCCAGCCGGAATAGGGGAGGCGAGAACATCTTTAGCCATTCCAAAAACACTCTCAAACTCCAGCCCGAATAGGGGAGGCGAGAACATCTTTAGCCATTCCAAAAACACTCTCAAACTCCAGCCCGAATAGGGGAGGCGAGAACATCTTTAGCCATTCCAAAGTTCAAGAATTTCTCTAGCAATTAGGACATGTTCGTGAGTGATTTTGTAGATGACTAAATTGACTTTGATCATTCCAAAAACACTCTCAAACGTGTTCGTATAAGTGGGGTGTGATTTGATTTTGTGCAGGTTATGATACCATTAAAGAAGGTCATAAAGGCCAACCAAAGCGAGAATGTTAGTGAGCCAGATATGAAGTATATAGAAGTGGTGACGGATGACAACTTTGATTTCTGGTTTATGGGATTCTTGAGATATGAGAAGGCATTTAAAAGTCTCCGGAAGGCCATTTCCATGGCTCACAGATGTTGAAAGAAGATGGTTGCATCACATTCTGGTGTGGTTTTTTGAAAGTTAGAAAATTCTTAGGGATTTCACAAGCCACATCTTTAGTGTCTCTAAGGGATTGTTCTGTATTTTGTAAGATTCAATGAGTGCTAGTTGGATTGAATCATGTTAAATATATATATATATATATTTGTTAAATTACAAATTTGGTCGTTTGAGAACGATAAAATTTTAAGTGTTTGAATTAGTCTATATGTAATAAAATTCTCATGAATTATCCCTTTTGAACATTTTATCAAATCACAACTATATGAGATTTTATGAGATCATAGAGATGTAATTTTAGCGTTTTTAGTTCTCCCACACCCACCTACCCACCAACCTTGATCTTATGAGATGGGTTCGAGTATGAGCATGCTTGTACGGATCCAAAAGATGGTCAACTATGCTTGAGAGGAGCGAAGCTAGAAGAAACTCAAGTGAAGGCCCGCAACGGTATTGACATGTAAATCGTTCGTCTGACTTAGGTATAGGGGCAAATGACTAATCAAACCATCTAGTTATGCTTCAACAGGGCGAAGCCAAAGGACATTCAGGTGGAGGCCCACAACAGTATTGGCATGTAAATCGTCCGTCTGACTTAGGTATAGGGGCAAAAGATTAATCAAACCATCTAGTTATGCATGAGCGGGGCGAAACCAGAAGAAATTCAGGTGGAGACCCACAACGACCCACAACGATATTGACATGTAAATCGTTCGTTTGACTTGGGCATAGGGACAAAAGACAACCATCTAGTTATGCTTGAACGGGGCGAAGCCAGAAGAAACATGATATTGACATGTGAATCGTTTAACTTAGGGGCAAAAGACCAATCAAACTATCGGGGAGTATTGGGGTTGAATGAGGTGAAATATTTAGTTTTCCTTTTGTATTTTACTCTCATATTTTAGTCATTTTTTTATTGACCAAACGTATAATTCAACTATTGTTTTTAATATGAGAGAAGATATAAAGAATGGGTTAGCTCGACTATTTTTATATTTTTAGTAATAATATTTGACTACATGCCGG ATGGTCGATTCTTTGATCTCTTTGTACCGTTGGTCGTTTCTCGGTCGGAAGGCGATTCCGGCCGGTGGCCGCGGACCACGATTTCGAAGTCTTGGTGTTCGAAGCCCTCTCATGAACTCTTTCGAGAAAACGCCTGAAAGGCGCGTACCTCTTTATTCCGATGGCTCTCCCTCTTCTTACGGTAAAGATCATTCAAAATTGGGGCACAAGAAGCAATTAATCAGGAAACGAGGCGGAATTGTATTTCGAATTTACGAGCATGTTAAATTGGGGCCTAAATTCTCGGTTACTGCCAAAGGAAAATTGAGATTAGGGGCAAAAATTATACGACAAGGTGGTAGAAAGAACATATTCAAACATGCTTTTGGGATTGTAGAAGGAGAAGAGCTTTTGAAGGCCTCTCAATGTTACTTATCAACAAGCGCAGGACCCATTGCAGGGCTTCTTTTCATGTCCACACACAGGGTTGCTTTCTGCAGTGAGCAAAGTATCACTTTCCCTTCACCAACTGGAGAACTGATCAAAACTCAGTACAAGGTTATGATACCATTAAAGAAGGTCATAAAGGCCAACCAAAGCGAGAATGTTAGTGAGCCAGATATGAAGTATATAGAAGTGGTGACGGATGACAACTTTGATTTCTGGTTTATGGGATTCTTGAGATATGAGAAGGCATTTAAAAGTCTCCGGAAGGCCATTTCCATGGCTCACAGATGTTGAAAGAAGATGGTTGCATCACATTCTGGTGTGGTTTTTTGAAAGTTAGAAAATTCTTAGGGATTTCACAAGCCACATCTTTAGTGTCTCTAAGGGATTGTTCTGTATTTTGTAAGATTCAATGAGTGCTAGTTGGATTGAATCATGTTAAATATATATATATATATATTTGTTAAATTACAAATTTGGTCGTTTGAGAACGATAAAATTTTAAGTGTTTGAATTAGTCTATATGTAATAAAATTCTCATGAATTATCCCTTTTGAACATTTTATCAAATCACAACTATATGAGATTTTATGAGATCATAGAGATGTAATTTTAGCGTTTTTAGTTCTCCCACACCCACCTACCCACCAACCTTGATCTTATGAGATGGGTTCGAGTATGAGCATGCTTGTACGGATCCAAAAGATGGTCAACTATGCTTGAGAGGAGCGAAGCTAGAAGAAACTCAAGTGAAGGCCCGCAACGGTATTGACATGTAAATCGTTCGTCTGACTTAGGTATAGGGGCAAAAGATTAATCAAACCATCTAGTTATGCATGAGCGGGGCGAAACCAGAAGAAATTCAGGTGGAGACCCACAACGACCCACAACGATATTGACATGTAAATCGTTCGTTTGACTTGGGCATAGGGACAAAAGACAACCATCTAGTTATGCTTGAACGGGGCGAAGCCAGAAGAAACATGATATTGACATGTGAATCGTTTAACTTAGGGGCAAAAGACCAATCAAACTATCGGGGAGTATTGGGGTTGAATGAGGTGAAATATTTAGTTTTCCTTTTGTATTTTACTCTCATATTTTAGTCATTTTTTTATTGACCAAACGTATAATTCAACTATTGTTTTTAATATGAGAGAAGATATAAAGAATGGGTTAGCTCGACTATTTTTATATTTTTAGTAATAATATTTGACTACATGCCGG ATGGTCGATTCTTTGATCTCTTTGTACCGTTGGTCGTTTCTCGGTCGGAAGGCGATTCCGGCCGGTGGCCGCGGACCACGATTTCGAAGTCTTGGTGTTCGAAGCCCTCTCATGAACTCTTTCGAGAAAACGCCTGAAAGGCGCGTACCTCTTTATTCCGATGGCTCTCCCTCTTCTTACGGTAAAGATCATTCAAAATTGGGGCACAAGAAGCAATTAATCAGGAAACGAGGCGGAATTGTATTTCGAATTTACGAGCATGTTAAATTGGGGCCTAAATTCTCGGTTACTGCCAAAGGAAAATTGAGATTAGGGGCAAAAATTATACGACAAGGTGGTAGAAAGAACATATTCAAACATGCTTTTGGGATTGTAGAAGGAGAAGAGCTTTTGAAGGCCTCTCAATGTTACTTATCAACAAGCGCAGGACCCATTGCAGGGCTTCTTTTCATGTCCACACACAGGGTTGCTTTCTGCAGTGAGCAAAGTATCACTTTCCCTTCACCAACTGGAGAACTGATCAAAACTCAGTACAAGGTTATGATACCATTAAAGAAGGTCATAAAGGCCAACCAAAGCGAGAATGTTAGTGAGCCAGATATGAAGTATATAGAAGTGGTGACGGATGACAACTTTGATTTCTGGTTTATGGGATTCTTGAGATATGAGAAGGCATTTAAAAGTCTCCGGAAGGCCATTTCCATGGCTCACAGATGTTGA
BLAST of CmoCh18G000800 vs. Swiss-Prot
Match: GEML4_ARATH (GEM-like protein 4 OS=Arabidopsis thaliana GN=At5g08350 PE=2 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 5.2e-45 Identity = 95/189 (50.26%), Postives = 124/189 (65.61%), Query Frame = 1
BLAST of CmoCh18G000800 vs. Swiss-Prot
Match: GEML8_ARATH (Putative GEM-like protein 8 OS=Arabidopsis thaliana GN=At5g23370 PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 8.8e-45 Identity = 90/173 (52.02%), Postives = 122/173 (70.52%), Query Frame = 1
BLAST of CmoCh18G000800 vs. Swiss-Prot
Match: GEML6_ARATH (GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g23350 PE=2 SV=2) HSP 1 Score: 177.9 bits (450), Expect = 1.3e-43 Identity = 89/169 (52.66%), Postives = 117/169 (69.23%), Query Frame = 1
BLAST of CmoCh18G000800 vs. Swiss-Prot
Match: GEML7_ARATH (GEM-like protein 7 OS=Arabidopsis thaliana GN=At5g23360 PE=2 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 7.0e-42 Identity = 87/180 (48.33%), Postives = 119/180 (66.11%), Query Frame = 1
BLAST of CmoCh18G000800 vs. Swiss-Prot
Match: GEML5_ARATH (GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g13200 PE=1 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.1e-30 Identity = 66/160 (41.25%), Postives = 97/160 (60.62%), Query Frame = 1
BLAST of CmoCh18G000800 vs. TrEMBL
Match: A0A0A0LW01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043190 PE=4 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 6.5e-87 Identity = 165/212 (77.83%), Postives = 183/212 (86.32%), Query Frame = 1
BLAST of CmoCh18G000800 vs. TrEMBL
Match: W9REP8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005402 PE=4 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 4.4e-67 Identity = 131/217 (60.37%), Postives = 167/217 (76.96%), Query Frame = 1
BLAST of CmoCh18G000800 vs. TrEMBL
Match: A0A059AVC1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00655 PE=4 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 4.5e-64 Identity = 127/218 (58.26%), Postives = 160/218 (73.39%), Query Frame = 1
BLAST of CmoCh18G000800 vs. TrEMBL
Match: A0A059A3H7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02322 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 1.3e-63 Identity = 127/218 (58.26%), Postives = 167/218 (76.61%), Query Frame = 1
BLAST of CmoCh18G000800 vs. TrEMBL
Match: F6HW67_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0119g00110 PE=4 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 1.2e-61 Identity = 125/215 (58.14%), Postives = 158/215 (73.49%), Query Frame = 1
BLAST of CmoCh18G000800 vs. TAIR10
Match: AT5G08350.1 (AT5G08350.1 GRAM domain-containing protein / ABA-responsive protein-related) HSP 1 Score: 182.6 bits (462), Expect = 2.9e-46 Identity = 95/189 (50.26%), Postives = 124/189 (65.61%), Query Frame = 1
BLAST of CmoCh18G000800 vs. TAIR10
Match: AT5G23370.1 (AT5G23370.1 GRAM domain-containing protein / ABA-responsive protein-related) HSP 1 Score: 181.8 bits (460), Expect = 5.0e-46 Identity = 90/173 (52.02%), Postives = 122/173 (70.52%), Query Frame = 1
BLAST of CmoCh18G000800 vs. TAIR10
Match: AT5G23350.1 (AT5G23350.1 GRAM domain-containing protein / ABA-responsive protein-related) HSP 1 Score: 177.9 bits (450), Expect = 7.2e-45 Identity = 89/169 (52.66%), Postives = 117/169 (69.23%), Query Frame = 1
BLAST of CmoCh18G000800 vs. TAIR10
Match: AT5G23360.1 (AT5G23360.1 GRAM domain-containing protein / ABA-responsive protein-related) HSP 1 Score: 172.2 bits (435), Expect = 3.9e-43 Identity = 87/180 (48.33%), Postives = 119/180 (66.11%), Query Frame = 1
BLAST of CmoCh18G000800 vs. TAIR10
Match: AT5G13200.1 (AT5G13200.1 GRAM domain family protein) HSP 1 Score: 134.0 bits (336), Expect = 1.2e-31 Identity = 66/160 (41.25%), Postives = 97/160 (60.62%), Query Frame = 1
BLAST of CmoCh18G000800 vs. NCBI nr
Match: gi|659066975|ref|XP_008437022.1| (PREDICTED: GEM-like protein 4 isoform X1 [Cucumis melo]) HSP 1 Score: 334.7 bits (857), Expect = 1.3e-88 Identity = 168/212 (79.25%), Postives = 183/212 (86.32%), Query Frame = 1
BLAST of CmoCh18G000800 vs. NCBI nr
Match: gi|449439517|ref|XP_004137532.1| (PREDICTED: putative GEM-like protein 8 isoform X1 [Cucumis sativus]) HSP 1 Score: 328.6 bits (841), Expect = 9.3e-87 Identity = 165/212 (77.83%), Postives = 183/212 (86.32%), Query Frame = 1
BLAST of CmoCh18G000800 vs. NCBI nr
Match: gi|659066977|ref|XP_008437030.1| (PREDICTED: GEM-like protein 4 isoform X2 [Cucumis melo]) HSP 1 Score: 305.4 bits (781), Expect = 8.5e-80 Identity = 157/212 (74.06%), Postives = 172/212 (81.13%), Query Frame = 1
BLAST of CmoCh18G000800 vs. NCBI nr
Match: gi|778657529|ref|XP_011651054.1| (PREDICTED: GEM-like protein 4 isoform X2 [Cucumis sativus]) HSP 1 Score: 298.9 bits (764), Expect = 7.9e-78 Identity = 154/212 (72.64%), Postives = 172/212 (81.13%), Query Frame = 1
BLAST of CmoCh18G000800 vs. NCBI nr
Match: gi|703116594|ref|XP_010101166.1| (hypothetical protein L484_005402 [Morus notabilis]) HSP 1 Score: 262.7 bits (670), Expect = 6.3e-67 Identity = 131/217 (60.37%), Postives = 167/217 (76.96%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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