Csa1G043190 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G043190
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionGEM-like protein; contains IPR004182 (GRAM)
LocationChr1 : 4788175 .. 4790467 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGTTCAAAGTTGATGAAGTTGCTTAGGAACTTTCTGCTTCCGCGTTATTATTTTAACTCCACTTGTTCCATGATCTTCTTCCAATTTTCTCTTTCCATAAAATAGAATTTCCTACTCACAAATTCTCCCGTTTCTTTCGATGGAAGTTACGATTCAAAGGTAGAGTTGATTCCATAAATTACAGATTGATTTCCAATCTCTTTGTCCGGTTGATCGTCCTTCCGTCGGAAGGCGATTCCGGCCACTGTTCAGAATTTCGTAGCTTTCGTTGTTCGAAGCCCTATGATGAAATCTTTCGACAAAACGCCGGATAGGAACTCGTCTTTTTCTGAACCTGTCAGCTCAATCCACAGTCCTCTTTATTCCGATGGCTCTCCTTCTTCTTCCGGTAATAATCATTCTTCTCTCGATCTTGGCGCCGTTCTGTTCATCTAAGATTGATGGGGTAGTCATTTTTTGCAGGTAACAATAATTCAAAATCAGGGCGTAAGAAACAATTAATCAGGAAACGAGGTGGATTTGTATTTCGGGTATACGAGCATGGTAAGGATCGATAGTTTTTGCTGTAGAAATGTATTGAACACTACCTGTTTGTGGAAATGCCATCTGAAATTTATCACAATATGATATGATGGAATGAGGGTAATCTTGTGTTTGTGTGAAATCTGTAGTTAAGTTGGGGCCTAAATTCTTGGTAACTGCTAAAGGTAAATTGAGATTAGGGGCAAAAATAATACAACAAGGTGGCAGAAAGAACATATTCAAACAGGTTTTTGGAATTGTAGAAGGAGAGCAGCTTTTGAAGGCCTCTCAATGCTACTTATCAACAAGTGCAGGGCCCATTGCTGGGCTTCTTTTCATATCTACAGAGAAAGTTGCTTTCTGCAGTGAGCAAAGTATCACTTTCTCTTCACCAACTGGTGAATTGCTCAAAACACCTTATAAGGTAATCTCTTTGCACTTAAGCATTCGACTCAGGGTCAGAAAGATGTAAAACATTTATTCTGCTAGACACGTAGTAGATTGCACACAAGTCATGTTTGATTGATTTGATTGATTTGATTTGACCATATATATAACATAAAGTTCTGATTTTCAGAAAATGGAAGTCAAAGATTTTAGGTGTAGAATGGAAGATACACACATAGATACTGACAATTTTGGCTGGTCTTTTTATATAAAAGATCACCAACTTTTCGTTGGGAGAAAGTGATTGAACTAACTGAAAAGTGTCTAGGTGAAAGCTATGATGTAACTATCCATATGTGCTTAGTTCTTATCGAGAATTTTGTTCAGGCTTGGGATCTAGGACCAAGATCGTAATTTCGAACTATCTAATCTGTGAAAGTTTAAACACCATGCGATTCAAAACTTCCATGAGATGCATAATATTACAAGCTAACCTTTTAAGATATATAATACTTCCAAATTAAAGGGGTATATTAAGACCCCTGCTTTGCAGTTTGATGACTTTCCCCCCTTACATAAAGGTGTGTTTAAATAAAGTTCTTTCTTGAGAATAATTTAAAACTCCACAATCTTTCTTTGTATTAAAAGCAAAAAGGAAAAAGAGTTTAACTTTCAAAAAGCTGAGAAGGATCTCTCTAGCACTAAACTACTACTTTTCCCAACCTGTTAGGGCATGTTTACTCTTGTTAGGCCCAAAGTCAATAAAAAAAATGCATGACGAAAGTGACCTTAGTCATTAAAAAATACTTCCAAACATGCAATTCATACCTGCTAAAGATCATACCCTTTGAAAATGACAGTGGTGTGTGATTTTCTACAGGTTTTGATACCATTAAAGAAGATCAGAAAAGCCAATCAAAGTGAGAATGTCAATGATCCAGCAAAAAAGTACATCGAAGTGGTGACAGATGACAACTTTGATTTCTGGTTTATGGGATTTTTGAGATATGAAAAGGCATTTACAAATCTTCAGAAGGCCATTTCCATGGCTAACAATTCAATGCAACAGTTCACAGATATATCATGAAACTAACCAATTCTGGCCGAAGAAGGTGTTGCTTTTCCTTCCCATTCATAGGAGTGAGTGCTTTTTGAACTTAGGAATTTGATAGGTATTTCACATACTCACATCTTGGAGTGTTTCTAATGAATGTATTGCTCTATATTTTGTATGTATATCTGATGACTGTTGTTTAAGTTTAGTTTTCCCACATCCCTGTGCATCGAAGTGGGCTTGATTGAAATATGTAAAATATCTTATTTGCTCCTAAATTGTATTTTACTCGAACTCATCAGGTACTTTTGTTATTTTCTTTTGATTTT

mRNA sequence

ATGATGAAATCTTTCGACAAAACGCCGGATAGGAACTCGTCTTTTTCTGAACCTGTCAGCTCAATCCACAGTCCTCTTTATTCCGATGGCTCTCCTTCTTCTTCCGGTAACAATAATTCAAAATCAGGGCGTAAGAAACAATTAATCAGGAAACGAGGTGGATTTGTATTTCGGGTATACGAGCATGTTAAGTTGGGGCCTAAATTCTTGGTAACTGCTAAAGGTAAATTGAGATTAGGGGCAAAAATAATACAACAAGGTGGCAGAAAGAACATATTCAAACAGGTTTTTGGAATTGTAGAAGGAGAGCAGCTTTTGAAGGCCTCTCAATGCTACTTATCAACAAGTGCAGGGCCCATTGCTGGGCTTCTTTTCATATCTACAGAGAAAGTTGCTTTCTGCAGTGAGCAAAGTATCACTTTCTCTTCACCAACTGGTGAATTGCTCAAAACACCTTATAAGGTTTTGATACCATTAAAGAAGATCAGAAAAGCCAATCAAAGTGAGAATGTCAATGATCCAGCAAAAAAGTACATCGAAGTGGTGACAGATGACAACTTTGATTTCTGGTTTATGGGATTTTTGAGATATGAAAAGGCATTTACAAATCTTCAGAAGGCCATTTCCATGGCTAACAATTCAATGCAACAGTTCACAGATATATCATGA

Coding sequence (CDS)

ATGATGAAATCTTTCGACAAAACGCCGGATAGGAACTCGTCTTTTTCTGAACCTGTCAGCTCAATCCACAGTCCTCTTTATTCCGATGGCTCTCCTTCTTCTTCCGGTAACAATAATTCAAAATCAGGGCGTAAGAAACAATTAATCAGGAAACGAGGTGGATTTGTATTTCGGGTATACGAGCATGTTAAGTTGGGGCCTAAATTCTTGGTAACTGCTAAAGGTAAATTGAGATTAGGGGCAAAAATAATACAACAAGGTGGCAGAAAGAACATATTCAAACAGGTTTTTGGAATTGTAGAAGGAGAGCAGCTTTTGAAGGCCTCTCAATGCTACTTATCAACAAGTGCAGGGCCCATTGCTGGGCTTCTTTTCATATCTACAGAGAAAGTTGCTTTCTGCAGTGAGCAAAGTATCACTTTCTCTTCACCAACTGGTGAATTGCTCAAAACACCTTATAAGGTTTTGATACCATTAAAGAAGATCAGAAAAGCCAATCAAAGTGAGAATGTCAATGATCCAGCAAAAAAGTACATCGAAGTGGTGACAGATGACAACTTTGATTTCTGGTTTATGGGATTTTTGAGATATGAAAAGGCATTTACAAATCTTCAGAAGGCCATTTCCATGGCTAACAATTCAATGCAACAGTTCACAGATATATCATGA

Protein sequence

MMKSFDKTPDRNSSFSEPVSSIHSPLYSDGSPSSSGNNNSKSGRKKQLIRKRGGFVFRVYEHVKLGPKFLVTAKGKLRLGAKIIQQGGRKNIFKQVFGIVEGEQLLKASQCYLSTSAGPIAGLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPLKKIRKANQSENVNDPAKKYIEVVTDDNFDFWFMGFLRYEKAFTNLQKAISMANNSMQQFTDIS*
Homology
[Close]
BLAST of Csa1G043190 vs. Swiss-Prot
Match: GEML4_ARATH (GEM-like protein 4 OS=Arabidopsis thaliana GN=At5g08350 PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.0e-47
Identity = 98/181 (54.14%), Postives = 127/181 (70.17%), Query Frame = 1 

Query: 31  SPSSSGNNNSKSGRKKQLIRKRGGFVFRVYEHVKLGPKFLVTAKGKLRLGAKIIQQGGRK 90
           S   S  +N KS  K+   +K  GF   V +  K+ PK   T K KL LGA+I+Q GG +
Sbjct: 38  SSKKSEQSNVKSILKR---KKTDGFTNGVRDQSKIRPKLTETVKRKLSLGARILQVGGLE 97

Query: 91  NIFKQVFGIVEGEQLLKASQCYLSTSAGPIAGLLFISTEKVAFCSEQSITFSSPTGELLK 150
            IFK++F + EGE+L K  QCYLST+AGPIAGLLFIS++K+AFCSE+SI   SP G++++
Sbjct: 98  KIFKRLFRVSEGEKLFKMYQCYLSTTAGPIAGLLFISSKKMAFCSERSIKVDSPQGDIIR 157

Query: 151 TPYKVLIPLKKIRKANQSENVNDPAKKYIEVVTDDNFDFWFMGFLRYEKAFTNLQKAISM 210
             YKV IPL KI + NQS+N   P++KY+EVVT D FDFWFMGFL Y+KAF  L+KA+S+
Sbjct: 158 VHYKVSIPLCKIDRVNQSQNTKKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEKALSL 215

Query: 211 A 212
           +
Sbjct: 218 S 215

[Close]
BLAST of Csa1G043190 vs. Swiss-Prot
Match: GEML8_ARATH (Putative GEM-like protein 8 OS=Arabidopsis thaliana GN=At5g23370 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 3.0e-47
Identity = 95/172 (55.23%), Postives = 125/172 (72.67%), Query Frame = 1 

Query: 42  SGRKKQLIRKR--GGFVFRVYEHVKLGPKFLVTAKGKLRLGAKIIQQGGRKNIFKQVFGI 101
           +G+ K ++RK+    F   V +  KLGPK   T K KL LGA+I+Q GG + I+K++F +
Sbjct: 45  TGKGKSMLRKKKNDSFTNGVRDQDKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKV 104

Query: 102 VEGEQLLKASQCYLSTSAGPIAGLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPL 161
            + E+L KA QCYLST+AGPIAGLLFIS++K+AFCSE+SI  +SP GEL +  YKV IPL
Sbjct: 105 SDEEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGELNRVHYKVSIPL 164

Query: 162 KKIRKANQSENVNDPAKKYIEVVTDDNFDFWFMGFLRYEKAFTNLQKAISMA 212
            KI   NQS+N   P++KY+EVVT D FDFWFMGFL Y+KAF  L++A+S++
Sbjct: 165 CKINGVNQSQNTTKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEQALSLS 216

[Close]
BLAST of Csa1G043190 vs. Swiss-Prot
Match: GEML6_ARATH (GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g23350 PE=2 SV=2)

HSP 1 Score: 187.6 bits (475), Expect = 1.5e-46
Identity = 93/170 (54.71%), Postives = 122/170 (71.76%), Query Frame = 1 

Query: 42  SGRKKQLIRKR--GGFVFRVYEHVKLGPKFLVTAKGKLRLGAKIIQQGGRKNIFKQVFGI 101
           +G+ K ++RK+    F     +  KLGPK   T K KL LGAKI+Q GG + I+K++F +
Sbjct: 45  TGKGKSMLRKKKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKV 104

Query: 102 VEGEQLLKASQCYLSTSAGPIAGLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPL 161
            + E+L KA QCYLST+AGPIAGLLFIS++K+AFCSE+SI  +SP G L +  YKV IPL
Sbjct: 105 CDQEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGVLSRVHYKVSIPL 164

Query: 162 KKIRKANQSENVNDPAKKYIEVVTDDNFDFWFMGFLRYEKAFTNLQKAIS 210
            KI   NQS+N   P++KY+E+VT DNFDFWFMGF+ Y+KAF  L+KA++
Sbjct: 165 CKINGVNQSQNTKKPSQKYLEIVTIDNFDFWFMGFVSYQKAFNCLEKALN 214

[Close]
BLAST of Csa1G043190 vs. Swiss-Prot
Match: GEML7_ARATH (GEM-like protein 7 OS=Arabidopsis thaliana GN=At5g23360 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 5.3e-44
Identity = 87/160 (54.37%), Postives = 114/160 (71.25%), Query Frame = 1 

Query: 50  RKRGGFVFRVYEHVKLGPKFLVTAKGKLRLGAKIIQQGGRKNIFKQVFGIVEGEQLLKAS 109
           +K   F     +  KLGPK   T K KL LGAKI+Q GG + I+K++F + + E+L KA 
Sbjct: 47  KKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAY 106

Query: 110 QCYLSTSAGPIAGLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPLKKIRKANQSE 169
           QCYLST+ G IAGLLFIS++K+AFCSE+SI  +SP G+L +  YKV IPL KI   NQS+
Sbjct: 107 QCYLSTTEGSIAGLLFISSKKIAFCSERSIKVTSPQGDLTRVHYKVSIPLCKINGVNQSQ 166

Query: 170 NVNDPAKKYIEVVTDDNFDFWFMGFLRYEKAFTNLQKAIS 210
           N   P+++Y+EVVT DN+DFWFMGF+ Y+KAF  L+KA++
Sbjct: 167 NTKKPSQRYLEVVTVDNYDFWFMGFVSYQKAFNCLEKALN 206

[Close]
BLAST of Csa1G043190 vs. Swiss-Prot
Match: GEM_ARATH (GLABRA2 expression modulator OS=Arabidopsis thaliana GN=GEM PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.5e-30
Identity = 64/166 (38.55%), Postives = 105/166 (63.25%), Query Frame = 1 

Query: 44  RKKQLIRKRGGFVFRVYEHVKLGPKFLVTAKGKLRLGAKIIQQGGRKNIFKQVFGIVEGE 103
           R  +  +K        ++H++  P F   A G++    K+  +GG + IF+Q F     E
Sbjct: 128 RVAEAAKKTESLAGNTWQHLRTAPSFADAAMGRIAQSTKVFAEGGYEKIFRQTFETDPEE 187

Query: 104 QLLKASQCYLSTSAGPIAGLLFISTEKVAFCSEQSITFSSPTGELLK-TPYKVLIPLKKI 163
           QLL +  CYLSTSAGP+ G+L+IS+ K+A+CS+  +++ +  G+  + + YKV+IPL ++
Sbjct: 188 QLLNSFACYLSTSAGPVMGVLYISSAKLAYCSDNPLSYKN--GDQTEWSYYKVVIPLHQL 247

Query: 164 RKANQSENVNDPAKKYIEVVTDDNFDFWFMGFLRYEKAFTNLQKAI 209
           +  N S ++ +PA+KYI+V++ DN +FWFMGFL Y+ A T+LQ ++
Sbjct: 248 KAVNPSASIVNPAEKYIQVISVDNHEFWFMGFLNYDGAVTSLQDSL 291

[Close]
BLAST of Csa1G043190 vs. TrEMBL
Match: A0A0A0LW01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043190 PE=4 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 6.4e-121
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 1 

Query: 1   MMKSFDKTPDRNSSFSEPVSSIHSPLYSDGSPSSSGNNNSKSGRKKQLIRKRGGFVFRVY 60
           MMKSFDKTPDRNSSFSEPVSSIHSPLYSDGSPSSSGNNNSKSGRKKQLIRKRGGFVFRVY
Sbjct: 1   MMKSFDKTPDRNSSFSEPVSSIHSPLYSDGSPSSSGNNNSKSGRKKQLIRKRGGFVFRVY 60

Query: 61  EHVKLGPKFLVTAKGKLRLGAKIIQQGGRKNIFKQVFGIVEGEQLLKASQCYLSTSAGPI 120
           EHVKLGPKFLVTAKGKLRLGAKIIQQGGRKNIFKQVFGIVEGEQLLKASQCYLSTSAGPI
Sbjct: 61  EHVKLGPKFLVTAKGKLRLGAKIIQQGGRKNIFKQVFGIVEGEQLLKASQCYLSTSAGPI 120

Query: 121 AGLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPLKKIRKANQSENVNDPAKKYIE 180
           AGLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPLKKIRKANQSENVNDPAKKYIE
Sbjct: 121 AGLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPLKKIRKANQSENVNDPAKKYIE 180

Query: 181 VVTDDNFDFWFMGFLRYEKAFTNLQKAISMANNSMQQFTDIS 223
           VVTDDNFDFWFMGFLRYEKAFTNLQKAISMANNSMQQFTDIS
Sbjct: 181 VVTDDNFDFWFMGFLRYEKAFTNLQKAISMANNSMQQFTDIS 222

[Close]
BLAST of Csa1G043190 vs. TrEMBL
Match: W9REP8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005402 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 4.5e-74
Identity = 137/213 (64.32%), Postives = 173/213 (81.22%), Query Frame = 1 

Query: 1   MMKSFDKTPDRNSSFSEPVSSIHSPLYSDGSPS-SSGNNNSKSGRKKQLIRKRGGFVFRV 60
           +  S+  TP+R SS SEPVS   SP YSD S S ++     K G KK   RK   F +R+
Sbjct: 14  LTNSYGTTPERPSSLSEPVSLCQSPSYSDASSSFNTDEAGPKKGHKKNFGRKNASFTYRI 73

Query: 61  YEHVKLGPKFLVTAKGKLRLGAKIIQQGGRKNIFKQVFGIVEGEQLLKASQCYLSTSAGP 120
            EHVKLG +F  T KGKL LGAK+I++GGR NIFKQ+FG+ EGE+LLKASQCYLST+ GP
Sbjct: 74  REHVKLGSRFSETVKGKLSLGAKVIKEGGRGNIFKQIFGVKEGEELLKASQCYLSTTGGP 133

Query: 121 IAGLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPLKKIRKANQSENVNDPAKKYI 180
           IAGLLFISTEK+AFCSE++ITF S TG+L++TPY+V+IP+KKI++ANQSENVN+PA+KY+
Sbjct: 134 IAGLLFISTEKIAFCSERAITFPSATGQLIRTPYRVVIPIKKIKRANQSENVNNPAQKYM 193

Query: 181 EVVTDDNFDFWFMGFLRYEKAFTNLQKAISMAN 213
           E+VT+D+F+FWFMGFLRYEKA+ NL KA++MAN
Sbjct: 194 EIVTEDDFEFWFMGFLRYEKAYRNLIKALTMAN 226

[Close]
BLAST of Csa1G043190 vs. TrEMBL
Match: F6HW67_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0119g00110 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 4.7e-71
Identity = 140/214 (65.42%), Postives = 169/214 (78.97%), Query Frame = 1 

Query: 2   MKSFDKTPDRN-SSFSEPVSSIHSPLYSDGSPS--SSGNNNSKSGRKKQLIRKRGGFVFR 61
           M     TP+R  SS SEP S I SP  SD S +   + N NS  GR  +L +K   F FR
Sbjct: 15  MSPLGTTPERRPSSLSEPASRIQSPSSSDDSSNFIKTKNRNSVVGRMNKLGKKTHSFAFR 74

Query: 62  VYEHVKLGPKFLVTAKGKLRLGAKIIQQGGRKNIFKQVFGIVEGEQLLKASQCYLSTSAG 121
           V EHV+LGPK   T KGKL LGA+IIQ+GGR+ IFK +F + EGE+LLKASQCYLST+AG
Sbjct: 75  VREHVRLGPKLSETVKGKLSLGARIIQEGGREKIFKHIFSVNEGEELLKASQCYLSTTAG 134

Query: 122 PIAGLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPLKKIRKANQSENVNDPAKKY 181
           PIAGLLFISTEKVAFCSE+SI+ +SP+GE++++PYKVLIP++KI++ANQSENVN PA+KY
Sbjct: 135 PIAGLLFISTEKVAFCSERSISLTSPSGEIVRSPYKVLIPVRKIKRANQSENVNKPAQKY 194

Query: 182 IEVVTDDNFDFWFMGFLRYEKAFTNLQKAISMAN 213
           IE+VT D F+FWFMGFLRYEKAF NL+KAISM N
Sbjct: 195 IEIVTTDGFEFWFMGFLRYEKAFKNLEKAISMYN 228

[Close]
BLAST of Csa1G043190 vs. TrEMBL
Match: A0A059A3H7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02322 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 4.7e-71
Identity = 135/212 (63.68%), Postives = 173/212 (81.60%), Query Frame = 1 

Query: 2   MKSFDKTPDRNSSFSEPVSSIHSPLYSDGSPSSSGNNNS-KSGRKKQLIRKRGGFVFRVY 61
           M+S++ TP+R  S SEPVS + SP  SDG  S   +      G +++L RK   F FRV 
Sbjct: 12  MRSYESTPERPFSVSEPVSVLQSPSSSDGFNSFKIDEEEIYPGHQRKLGRKSSSFTFRVR 71

Query: 62  EHVKLGPKFLVTAKGKLRLGAKIIQQGGRKNIFKQVFGIVEGEQLLKASQCYLSTSAGPI 121
           +HVKLGPK   T KGKLRLGAKI+Q GGR++IFK+VFG+ EGE+ LKASQCYLSTSAGPI
Sbjct: 72  DHVKLGPKLSETVKGKLRLGAKIVQGGGRESIFKRVFGMEEGEEFLKASQCYLSTSAGPI 131

Query: 122 AGLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPLKKIRKANQSENVNDPAKKYIE 181
           AGLLFIST+K+AFCSE+SITF SP G+L+++PYKVLIP +KI++AN+SEN N+PA+KYIE
Sbjct: 132 AGLLFISTQKIAFCSERSITFPSPNGKLVRSPYKVLIPTEKIKRANRSENENNPAQKYIE 191

Query: 182 VVTDDNFDFWFMGFLRYEKAFTNLQKAISMAN 213
           ++T D+++FWFMGFLRYEKAF NL+KA+++AN
Sbjct: 192 ILTQDDYEFWFMGFLRYEKAFKNLEKAMTVAN 223

[Close]
BLAST of Csa1G043190 vs. TrEMBL
Match: V4VP73_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022077mg PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 6.1e-71
Identity = 135/213 (63.38%), Postives = 170/213 (79.81%), Query Frame = 1 

Query: 1   MMKSFDKTPDRNSSFSEPVSSIHSPLYSDGSPS-SSGNNNSKSGRKKQLIRKRGGFVFRV 60
           M  S+D TP+R SS S+P  S  SP  SD SPS SS   +++ G++K +  K   F  R+
Sbjct: 11  MAVSYDTTPERCSSQSQPFCSFQSPSSSDASPSFSSYEEDTEMGQRKCIESKGSNFACRI 70

Query: 61  YEHVKLGPKFLVTAKGKLRLGAKIIQQGGRKNIFKQVFGIVEGEQLLKASQCYLSTSAGP 120
            +HVK+GPKF  T K KL LGAKIIQ+GGR+NIFKQ+FG+ EGE+ LKASQCYLST+ GP
Sbjct: 71  RDHVKMGPKFSETVKSKLSLGAKIIQKGGRENIFKQIFGLTEGEEFLKASQCYLSTTRGP 130

Query: 121 IAGLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPLKKIRKANQSENVNDPAKKYI 180
           IAGLLFIS +K+AFCSE+SI++SS TGEL++TPYKVLIP++KI+  N+SENV  P +KY+
Sbjct: 131 IAGLLFISNKKIAFCSERSISYSSSTGELIRTPYKVLIPIQKIKSINESENVTKPEQKYV 190

Query: 181 EVVTDDNFDFWFMGFLRYEKAFTNLQKAISMAN 213
           E+VT D+F+FWFMGFLRYEKA+ NLQKAISMAN
Sbjct: 191 EIVTVDDFEFWFMGFLRYEKAYRNLQKAISMAN 223

[Close]
BLAST of Csa1G043190 vs. TAIR10
Match: AT5G08350.1 (AT5G08350.1 GRAM domain-containing protein / ABA-responsive protein-related)

HSP 1 Score: 191.4 bits (485), Expect = 5.9e-49
Identity = 98/181 (54.14%), Postives = 127/181 (70.17%), Query Frame = 1 

Query: 31  SPSSSGNNNSKSGRKKQLIRKRGGFVFRVYEHVKLGPKFLVTAKGKLRLGAKIIQQGGRK 90
           S   S  +N KS  K+   +K  GF   V +  K+ PK   T K KL LGA+I+Q GG +
Sbjct: 38  SSKKSEQSNVKSILKR---KKTDGFTNGVRDQSKIRPKLTETVKRKLSLGARILQVGGLE 97

Query: 91  NIFKQVFGIVEGEQLLKASQCYLSTSAGPIAGLLFISTEKVAFCSEQSITFSSPTGELLK 150
            IFK++F + EGE+L K  QCYLST+AGPIAGLLFIS++K+AFCSE+SI   SP G++++
Sbjct: 98  KIFKRLFRVSEGEKLFKMYQCYLSTTAGPIAGLLFISSKKMAFCSERSIKVDSPQGDIIR 157

Query: 151 TPYKVLIPLKKIRKANQSENVNDPAKKYIEVVTDDNFDFWFMGFLRYEKAFTNLQKAISM 210
             YKV IPL KI + NQS+N   P++KY+EVVT D FDFWFMGFL Y+KAF  L+KA+S+
Sbjct: 158 VHYKVSIPLCKIDRVNQSQNTKKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEKALSL 215

Query: 211 A 212
           +
Sbjct: 218 S 215

[Close]
BLAST of Csa1G043190 vs. TAIR10
Match: AT5G23370.1 (AT5G23370.1 GRAM domain-containing protein / ABA-responsive protein-related)

HSP 1 Score: 189.9 bits (481), Expect = 1.7e-48
Identity = 95/172 (55.23%), Postives = 125/172 (72.67%), Query Frame = 1 

Query: 42  SGRKKQLIRKR--GGFVFRVYEHVKLGPKFLVTAKGKLRLGAKIIQQGGRKNIFKQVFGI 101
           +G+ K ++RK+    F   V +  KLGPK   T K KL LGA+I+Q GG + I+K++F +
Sbjct: 45  TGKGKSMLRKKKNDSFTNGVRDQDKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKV 104

Query: 102 VEGEQLLKASQCYLSTSAGPIAGLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPL 161
            + E+L KA QCYLST+AGPIAGLLFIS++K+AFCSE+SI  +SP GEL +  YKV IPL
Sbjct: 105 SDEEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGELNRVHYKVSIPL 164

Query: 162 KKIRKANQSENVNDPAKKYIEVVTDDNFDFWFMGFLRYEKAFTNLQKAISMA 212
            KI   NQS+N   P++KY+EVVT D FDFWFMGFL Y+KAF  L++A+S++
Sbjct: 165 CKINGVNQSQNTTKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEQALSLS 216

[Close]
BLAST of Csa1G043190 vs. TAIR10
Match: AT5G23350.1 (AT5G23350.1 GRAM domain-containing protein / ABA-responsive protein-related)

HSP 1 Score: 187.6 bits (475), Expect = 8.5e-48
Identity = 93/170 (54.71%), Postives = 122/170 (71.76%), Query Frame = 1 

Query: 42  SGRKKQLIRKR--GGFVFRVYEHVKLGPKFLVTAKGKLRLGAKIIQQGGRKNIFKQVFGI 101
           +G+ K ++RK+    F     +  KLGPK   T K KL LGAKI+Q GG + I+K++F +
Sbjct: 107 TGKGKSMLRKKKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKV 166

Query: 102 VEGEQLLKASQCYLSTSAGPIAGLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPL 161
            + E+L KA QCYLST+AGPIAGLLFIS++K+AFCSE+SI  +SP G L +  YKV IPL
Sbjct: 167 CDQEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGVLSRVHYKVSIPL 226

Query: 162 KKIRKANQSENVNDPAKKYIEVVTDDNFDFWFMGFLRYEKAFTNLQKAIS 210
            KI   NQS+N   P++KY+E+VT DNFDFWFMGF+ Y+KAF  L+KA++
Sbjct: 227 CKINGVNQSQNTKKPSQKYLEIVTIDNFDFWFMGFVSYQKAFNCLEKALN 276

[Close]
BLAST of Csa1G043190 vs. TAIR10
Match: AT5G23360.1 (AT5G23360.1 GRAM domain-containing protein / ABA-responsive protein-related)

HSP 1 Score: 179.1 bits (453), Expect = 3.0e-45
Identity = 87/160 (54.37%), Postives = 114/160 (71.25%), Query Frame = 1 

Query: 50  RKRGGFVFRVYEHVKLGPKFLVTAKGKLRLGAKIIQQGGRKNIFKQVFGIVEGEQLLKAS 109
           +K   F     +  KLGPK   T K KL LGAKI+Q GG + I+K++F + + E+L KA 
Sbjct: 47  KKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAY 106

Query: 110 QCYLSTSAGPIAGLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPLKKIRKANQSE 169
           QCYLST+ G IAGLLFIS++K+AFCSE+SI  +SP G+L +  YKV IPL KI   NQS+
Sbjct: 107 QCYLSTTEGSIAGLLFISSKKIAFCSERSIKVTSPQGDLTRVHYKVSIPLCKINGVNQSQ 166

Query: 170 NVNDPAKKYIEVVTDDNFDFWFMGFLRYEKAFTNLQKAIS 210
           N   P+++Y+EVVT DN+DFWFMGF+ Y+KAF  L+KA++
Sbjct: 167 NTKKPSQRYLEVVTVDNYDFWFMGFVSYQKAFNCLEKALN 206

[Close]
BLAST of Csa1G043190 vs. TAIR10
Match: AT2G22475.1 (AT2G22475.1 GRAM domain family protein)

HSP 1 Score: 134.4 bits (337), Expect = 8.5e-32
Identity = 64/166 (38.55%), Postives = 105/166 (63.25%), Query Frame = 1 

Query: 44  RKKQLIRKRGGFVFRVYEHVKLGPKFLVTAKGKLRLGAKIIQQGGRKNIFKQVFGIVEGE 103
           R  +  +K        ++H++  P F   A G++    K+  +GG + IF+Q F     E
Sbjct: 128 RVAEAAKKTESLAGNTWQHLRTAPSFADAAMGRIAQSTKVFAEGGYEKIFRQTFETDPEE 187

Query: 104 QLLKASQCYLSTSAGPIAGLLFISTEKVAFCSEQSITFSSPTGELLK-TPYKVLIPLKKI 163
           QLL +  CYLSTSAGP+ G+L+IS+ K+A+CS+  +++ +  G+  + + YKV+IPL ++
Sbjct: 188 QLLNSFACYLSTSAGPVMGVLYISSAKLAYCSDNPLSYKN--GDQTEWSYYKVVIPLHQL 247

Query: 164 RKANQSENVNDPAKKYIEVVTDDNFDFWFMGFLRYEKAFTNLQKAI 209
           +  N S ++ +PA+KYI+V++ DN +FWFMGFL Y+ A T+LQ ++
Sbjct: 248 KAVNPSASIVNPAEKYIQVISVDNHEFWFMGFLNYDGAVTSLQDSL 291

[Close]
BLAST of Csa1G043190 vs. NCBI nr
Match: gi|449439517|ref|XP_004137532.1| (PREDICTED: putative GEM-like protein 8 isoform X1 [Cucumis sativus])

HSP 1 Score: 441.4 bits (1134), Expect = 9.2e-121
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 1 

Query: 1   MMKSFDKTPDRNSSFSEPVSSIHSPLYSDGSPSSSGNNNSKSGRKKQLIRKRGGFVFRVY 60
           MMKSFDKTPDRNSSFSEPVSSIHSPLYSDGSPSSSGNNNSKSGRKKQLIRKRGGFVFRVY
Sbjct: 1   MMKSFDKTPDRNSSFSEPVSSIHSPLYSDGSPSSSGNNNSKSGRKKQLIRKRGGFVFRVY 60

Query: 61  EHVKLGPKFLVTAKGKLRLGAKIIQQGGRKNIFKQVFGIVEGEQLLKASQCYLSTSAGPI 120
           EHVKLGPKFLVTAKGKLRLGAKIIQQGGRKNIFKQVFGIVEGEQLLKASQCYLSTSAGPI
Sbjct: 61  EHVKLGPKFLVTAKGKLRLGAKIIQQGGRKNIFKQVFGIVEGEQLLKASQCYLSTSAGPI 120

Query: 121 AGLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPLKKIRKANQSENVNDPAKKYIE 180
           AGLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPLKKIRKANQSENVNDPAKKYIE
Sbjct: 121 AGLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPLKKIRKANQSENVNDPAKKYIE 180

Query: 181 VVTDDNFDFWFMGFLRYEKAFTNLQKAISMANNSMQQFTDIS 223
           VVTDDNFDFWFMGFLRYEKAFTNLQKAISMANNSMQQFTDIS
Sbjct: 181 VVTDDNFDFWFMGFLRYEKAFTNLQKAISMANNSMQQFTDIS 222

[Close]
BLAST of Csa1G043190 vs. NCBI nr
Match: gi|659066975|ref|XP_008437022.1| (PREDICTED: GEM-like protein 4 isoform X1 [Cucumis melo])

HSP 1 Score: 425.6 bits (1093), Expect = 5.2e-116
Identity = 214/221 (96.83%), Postives = 216/221 (97.74%), Query Frame = 1 

Query: 2   MKSFDKTPDRNSSFSEPVSSIHSPLYSDGSPSSSGNNNSKSGRKKQLIRKRGGFVFRVYE 61
           MKSFDKTPDRNSSFSEPVSSIHSPLYSDGSPSSSGN+NSKSG KKQ IRKRGGFVFRVYE
Sbjct: 1   MKSFDKTPDRNSSFSEPVSSIHSPLYSDGSPSSSGNDNSKSGHKKQFIRKRGGFVFRVYE 60

Query: 62  HVKLGPKFLVTAKGKLRLGAKIIQQGGRKNIFKQVFGIVEGEQLLKASQCYLSTSAGPIA 121
           HVKLGPKFLVTAKGKLRLGAKII+QGGRKNIFKQVFGIVEGEQLLKASQCYLSTSAGPIA
Sbjct: 61  HVKLGPKFLVTAKGKLRLGAKIIRQGGRKNIFKQVFGIVEGEQLLKASQCYLSTSAGPIA 120

Query: 122 GLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPLKKIRKANQSENVNDPAKKYIEV 181
           GLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPLKKIRKANQSENVNDP KKYIEV
Sbjct: 121 GLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPLKKIRKANQSENVNDPTKKYIEV 180

Query: 182 VTDDNFDFWFMGFLRYEKAFTNLQKAISMANNSMQQFTDIS 223
           VTDDNFDFWFMGFLRYEKAFTNLQKAISMAN SMQQ TDIS
Sbjct: 181 VTDDNFDFWFMGFLRYEKAFTNLQKAISMANRSMQQSTDIS 221

[Close]
BLAST of Csa1G043190 vs. NCBI nr
Match: gi|778657529|ref|XP_011651054.1| (PREDICTED: GEM-like protein 4 isoform X2 [Cucumis sativus])

HSP 1 Score: 409.8 bits (1052), Expect = 3.0e-111
Identity = 210/222 (94.59%), Postives = 210/222 (94.59%), Query Frame = 1 

Query: 1   MMKSFDKTPDRNSSFSEPVSSIHSPLYSDGSPSSSGNNNSKSGRKKQLIRKRGGFVFRVY 60
           MMKSFDKTPDRNSSFSEPVSSIHSPLYSDGSPSSSGNNNSKSGRKKQLIRKRGGFVFRVY
Sbjct: 1   MMKSFDKTPDRNSSFSEPVSSIHSPLYSDGSPSSSGNNNSKSGRKKQLIRKRGGFVFRVY 60

Query: 61  EHVKLGPKFLVTAKGKLRLGAKIIQQGGRKNIFKQVFGIVEGEQLLKASQCYLSTSAGPI 120
           EH            GKLRLGAKIIQQGGRKNIFKQVFGIVEGEQLLKASQCYLSTSAGPI
Sbjct: 61  EH------------GKLRLGAKIIQQGGRKNIFKQVFGIVEGEQLLKASQCYLSTSAGPI 120

Query: 121 AGLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPLKKIRKANQSENVNDPAKKYIE 180
           AGLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPLKKIRKANQSENVNDPAKKYIE
Sbjct: 121 AGLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPLKKIRKANQSENVNDPAKKYIE 180

Query: 181 VVTDDNFDFWFMGFLRYEKAFTNLQKAISMANNSMQQFTDIS 223
           VVTDDNFDFWFMGFLRYEKAFTNLQKAISMANNSMQQFTDIS
Sbjct: 181 VVTDDNFDFWFMGFLRYEKAFTNLQKAISMANNSMQQFTDIS 210

[Close]
BLAST of Csa1G043190 vs. NCBI nr
Match: gi|659066977|ref|XP_008437030.1| (PREDICTED: GEM-like protein 4 isoform X2 [Cucumis melo])

HSP 1 Score: 394.0 bits (1011), Expect = 1.7e-106
Identity = 202/221 (91.40%), Postives = 204/221 (92.31%), Query Frame = 1 

Query: 2   MKSFDKTPDRNSSFSEPVSSIHSPLYSDGSPSSSGNNNSKSGRKKQLIRKRGGFVFRVYE 61
           MKSFDKTPDRNSSFSEPVSSIHSPLYSDGSPSSSGN+NSKSG KKQ IRKRGGFVFRVYE
Sbjct: 1   MKSFDKTPDRNSSFSEPVSSIHSPLYSDGSPSSSGNDNSKSGHKKQFIRKRGGFVFRVYE 60

Query: 62  HVKLGPKFLVTAKGKLRLGAKIIQQGGRKNIFKQVFGIVEGEQLLKASQCYLSTSAGPIA 121
           H            GKLRLGAKII+QGGRKNIFKQVFGIVEGEQLLKASQCYLSTSAGPIA
Sbjct: 61  H------------GKLRLGAKIIRQGGRKNIFKQVFGIVEGEQLLKASQCYLSTSAGPIA 120

Query: 122 GLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPLKKIRKANQSENVNDPAKKYIEV 181
           GLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPLKKIRKANQSENVNDP KKYIEV
Sbjct: 121 GLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPLKKIRKANQSENVNDPTKKYIEV 180

Query: 182 VTDDNFDFWFMGFLRYEKAFTNLQKAISMANNSMQQFTDIS 223
           VTDDNFDFWFMGFLRYEKAFTNLQKAISMAN SMQQ TDIS
Sbjct: 181 VTDDNFDFWFMGFLRYEKAFTNLQKAISMANRSMQQSTDIS 209

[Close]
BLAST of Csa1G043190 vs. NCBI nr
Match: gi|659066979|ref|XP_008437039.1| (PREDICTED: GEM-like protein 4 isoform X3 [Cucumis melo])

HSP 1 Score: 297.4 bits (760), Expect = 2.1e-77
Identity = 149/153 (97.39%), Postives = 151/153 (98.69%), Query Frame = 1 

Query: 2   MKSFDKTPDRNSSFSEPVSSIHSPLYSDGSPSSSGNNNSKSGRKKQLIRKRGGFVFRVYE 61
           MKSFDKTPDRNSSFSEPVSSIHSPLYSDGSPSSSGN+NSKSG KKQ IRKRGGFVFRVYE
Sbjct: 1   MKSFDKTPDRNSSFSEPVSSIHSPLYSDGSPSSSGNDNSKSGHKKQFIRKRGGFVFRVYE 60

Query: 62  HVKLGPKFLVTAKGKLRLGAKIIQQGGRKNIFKQVFGIVEGEQLLKASQCYLSTSAGPIA 121
           HVKLGPKFLVTAKGKLRLGAKII+QGGRKNIFKQVFGIVEGEQLLKASQCYLSTSAGPIA
Sbjct: 61  HVKLGPKFLVTAKGKLRLGAKIIRQGGRKNIFKQVFGIVEGEQLLKASQCYLSTSAGPIA 120

Query: 122 GLLFISTEKVAFCSEQSITFSSPTGELLKTPYK 155
           GLLFISTEKVAFCSEQSITFSSPTGELLKTPYK
Sbjct: 121 GLLFISTEKVAFCSEQSITFSSPTGELLKTPYK 153

The following BLAST results are available for this feature:
BLAST of Csa1G043190 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GEML4_ARATH1.0e-4754.14GEM-like protein 4 OS=Arabidopsis thaliana GN=At5g08350 PE=2 SV=1[more]
GEML8_ARATH3.0e-4755.23Putative GEM-like protein 8 OS=Arabidopsis thaliana GN=At5g23370 PE=3 SV=1[more]
GEML6_ARATH1.5e-4654.71GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g23350 PE=2 SV=2[more]
GEML7_ARATH5.3e-4454.38GEM-like protein 7 OS=Arabidopsis thaliana GN=At5g23360 PE=2 SV=1[more]
GEM_ARATH1.5e-3038.55GLABRA2 expression modulator OS=Arabidopsis thaliana GN=GEM PE=1 SV=1[more]
BLAST of Csa1G043190 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LW01_CUCSA6.4e-121100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043190 PE=4 SV=1[more]
W9REP8_9ROSA4.5e-7464.32Uncharacterized protein OS=Morus notabilis GN=L484_005402 PE=4 SV=1[more]
F6HW67_VITVI4.7e-7165.42Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0119g00110 PE=4 SV=... [more]
A0A059A3H7_EUCGR4.7e-7163.68Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02322 PE=4 SV=1[more]
V4VP73_9ROSI6.1e-7163.38Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022077mg PE=4 SV=1[more]
BLAST of Csa1G043190 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G08350.15.9e-4954.14 GRAM domain-containing protein / ABA-responsive protein-related[more]
AT5G23370.11.7e-4855.23 GRAM domain-containing protein / ABA-responsive protein-related[more]
AT5G23350.18.5e-4854.71 GRAM domain-containing protein / ABA-responsive protein-related[more]
AT5G23360.13.0e-4554.38 GRAM domain-containing protein / ABA-responsive protein-related[more]
AT2G22475.18.5e-3238.55 GRAM domain family protein[more]
BLAST of Csa1G043190 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449439517|ref|XP_004137532.1|9.2e-121100.00PREDICTED: putative GEM-like protein 8 isoform X1 [Cucumis sativus][more]
gi|659066975|ref|XP_008437022.1|5.2e-11696.83PREDICTED: GEM-like protein 4 isoform X1 [Cucumis melo][more]
gi|778657529|ref|XP_011651054.1|3.0e-11194.59PREDICTED: GEM-like protein 4 isoform X2 [Cucumis sativus][more]
gi|659066977|ref|XP_008437030.1|1.7e-10691.40PREDICTED: GEM-like protein 4 isoform X2 [Cucumis melo][more]
gi|659066979|ref|XP_008437039.1|2.1e-7797.39PREDICTED: GEM-like protein 4 isoform X3 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004182GRAM
IPR004182GRAM
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU118420cucumber EST collection version 3.0transcribed_cluster
CU121991cucumber EST collection version 3.0transcribed_cluster
CU173833cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G043190.1Csa1G043190.1mRNA
Csa1G043190.2Csa1G043190.2mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU118420CU118420transcribed_cluster
CU121991CU121991transcribed_cluster
CU173833CU173833transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004182GRAM domainPFAMPF02893GRAMcoord: 63..128
score: 7.1
IPR004182GRAM domainSMARTSM00568gram2001ccoord: 53..131
score: 4.
NoneNo IPR availablePANTHERPTHR31969FAMILY NOT NAMEDcoord: 63..177
score: 3.2
NoneNo IPR availablePANTHERPTHR31969:SF15SUBFAMILY NOT NAMEDcoord: 63..177
score: 3.2