CsaV3_1G007560 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TAAATCGTTTCCCGGGTGACCCACTCCTTCCTTGTCCTCTTGCTTCTGCGCTATTTTCCTCCCTTAACCTTTTCTATACATCAAATTTGGATCTATCAACTTCAACATGAATTTTCTTTTATCACAAAACAAGAAAAGAAAATGTTGTTCAAAGTTGATGAAGTTGCTTAGGAACTTTCTGCTTCCGCGTTATTATTTTAACTCCACTTGTTCCATGATCTTCTTCCAATTTTCTCTTTCCATAAAATAGAATTTCCTACTCACAAATTCTCCCGTTTCTTTCGATGGAAGTTACGATTCAAAGGTAGAGTTGATTCCATAAATTACAGATTGATTTCCAATCTCTTTGTCCGGTTGATCGTCCTTCCGTCGGAAGGCGATTCCGGCCACTGTTCAGAATTTCGTAGCTTTCGTTGTTCGAAGCCCTATGATGAAATCTTTCGACAAAACGCCGGATAGGAACTCGTCTTTTTCTGAACCTGTCAGCTCAATCCACAGTCCTCTTTATTCCGATGGCTCTCCTTCTTCTTCCGGTAATAATCATTCTTCTCTCGATCTTGGCGCCGTTCTGTTCATCTAAGATTGATGGGGTAGTCATTTTTTGCAGGTAACAATAATTCAAAATCAGGGCGTAAGAAACAATTAATCAGGAAACGAGGTGGATTTGTATTTCGGGTATACGAGCATGGTAAGGATCGATAGTTTTTGCTGTAGAAATGTATTGAACACTACCTGTTTGTGGAAATGCCATCTGAAATTTATCACAATATGATATGATGGAATGAGGGTAATCTTGTGTTTGTGTGAAATCTGTAGTTAAGTTGGGGCCTAAATTCTTGGTAACTGCTAAAGGTAAATTGAGATTAGGGGCAAAAATAATACAACAAGGTGGCAGAAAGAACATATTCAAACAGGTTTTTGGAATTGTAGAAGGAGAGCAGCTTTTGAAGGCCTCTCAATGCTACTTATCAACAAGTGCAGGGCCCATTGCTGGGCTTCTTTTCATATCTACAGAGAAAGTTGCTTTCTGCAGTGAGCAAAGTATCACTTTCTCTTCACCAACTGGTGAATTGCTCAAAACACCTTATAAGGTAATCTCTTTGCACTTAAGCATTCGACTCAGGGTCAGAAAGATGTAAAACATTTATTCTGCTAGACACGTAGTAGATTGCACACAAGTCATGTTTGATTGATTTGATTGATTTGATTTGACCATATATATAACATAAAGTTCTGATTTTCAGAAAATGGAAGTCAAAGATTTTAGGTGTAGAATGGAAGATACACACATAGATACTGACAATTTTGGCTGGTCTTTTTATATAAAAGATCACCAACTTTTCGTTGGGAGAAAGTGATTGAACTAACTGAAAAGTGTCTAGGTGAAAGCTATGATGTAACTATCCATATGTGCTTAGTTCTTATCGAGAATTTTGTTCAGGCTTGGGATCTAGGACCAAGATCGTAATTTCGAACTATCTAATCTGTGAAAGTTTAAACACCATGCGATTCAAAACTTCCATGAGATGCATAATATTACAAGCTAACCTTTTAAGATATATAATACTTCCAAATTAAAGGGGTATATTAAGACCCCTGCTTTGCAGTTTGATGACTTTCCCCCCTTACATAAAGGTGTGTTTAAATAAAGTTCTTTCTTGAGAATAATTTAAAACTCCACAATCTTTCTTTGTATTAAAAGCAAAAAGGAAAAAGAGTTTAACTTTCAAAAAGCTGAGAAGGATCTCTCTAGCACTAAACTACTACTTTTCCCAACCTGTTAGGGCATGTTTACTCTTGTTAGGCCCAAAGTCAATAAAAAAAATGCATGACGAAAGTGACCTTAGTCATTAAAAAATACTTCCAAACATGCAATTCATACCTGCTAAAGATCATACCCTTTGAAAATGACAGTGGTGTGTGATTTTCTACAGGTTTTGATACCATTAAAGAAGATCAGAAAAGCCAATCAAAGTGAGAATGTCAATGATCCAGCAAAAAAGTACATCGAAGTGGTGACAGATGACAACTTTGATTTCTGGTTTATGGGATTTTTGAGATATGAAAAGGCATTTACAAATCTTCAGAAGGCCATTTCCATGGCTAACAATTCAATGCAACAGTTCACAGATATATCATGAAACTAACCAATTCTGGCCGAAGAAGGTGTTGCTTTTCCTTCCCATTCATAGGAGTGAGTGCTTTTTGAACTTAGGAATTTGATAGGTATTTCACATACTCACATCTTGGAGTGTTTCTAATGAATGTATTGCTCTATATTTTGTATGTATATCTGATGACTGTTGTTTAAGTTTAGTTTTCCCACATCCCTGTGCATCGAAGTGGGCTTGATTGAAATATGTAAAATATCTTATTTGCTCCTAAATTGTATTTTACTCGAACTCATCAGGTACTTTTGTTATTTTCTTTTGATTTTTCATCTTGTTCTCTCGTTAATCTCTAGCAGATTTAGCATGAACCTCAAGACTCGAACTCTCCCAATCTTATCTTATTTATATAATATATAAAGGAAAAACCAATATGATACCG ATGATGAAATCTTTCGACAAAACGCCGGATAGGAACTCGTCTTTTTCTGAACCTGTCAGCTCAATCCACAGTCCTCTTTATTCCGATGGCTCTCCTTCTTCTTCCGGTAACAATAATTCAAAATCAGGGCGTAAGAAACAATTAATCAGGAAACGAGGTGGATTTGTATTTCGGGTATACGAGCATGTTAAGTTGGGGCCTAAATTCTTGGTAACTGCTAAAGGTAAATTGAGATTAGGGGCAAAAATAATACAACAAGGTGGCAGAAAGAACATATTCAAACAGGTTTTTGGAATTGTAGAAGGAGAGCAGCTTTTGAAGGCCTCTCAATGCTACTTATCAACAAGTGCAGGGCCCATTGCTGGGCTTCTTTTCATATCTACAGAGAAAGTTGCTTTCTGCAGTGAGCAAAGTATCACTTTCTCTTCACCAACTGGTGAATTGCTCAAAACACCTTATAAGGTTTTGATACCATTAAAGAAGATCAGAAAAGCCAATCAAAGTGAGAATGTCAATGATCCAGCAAAAAAGTACATCGAAGTGGTGACAGATGACAACTTTGATTTCTGGTTTATGGGATTTTTGAGATATGAAAAGGCATTTACAAATCTTCAGAAGGCCATTTCCATGGCTAACAATTCAATGCAACAGTTCACAGATATATCATGA ATGATGAAATCTTTCGACAAAACGCCGGATAGGAACTCGTCTTTTTCTGAACCTGTCAGCTCAATCCACAGTCCTCTTTATTCCGATGGCTCTCCTTCTTCTTCCGGTAACAATAATTCAAAATCAGGGCGTAAGAAACAATTAATCAGGAAACGAGGTGGATTTGTATTTCGGGTATACGAGCATGTTAAGTTGGGGCCTAAATTCTTGGTAACTGCTAAAGGTAAATTGAGATTAGGGGCAAAAATAATACAACAAGGTGGCAGAAAGAACATATTCAAACAGGTTTTTGGAATTGTAGAAGGAGAGCAGCTTTTGAAGGCCTCTCAATGCTACTTATCAACAAGTGCAGGGCCCATTGCTGGGCTTCTTTTCATATCTACAGAGAAAGTTGCTTTCTGCAGTGAGCAAAGTATCACTTTCTCTTCACCAACTGGTGAATTGCTCAAAACACCTTATAAGGTTTTGATACCATTAAAGAAGATCAGAAAAGCCAATCAAAGTGAGAATGTCAATGATCCAGCAAAAAAGTACATCGAAGTGGTGACAGATGACAACTTTGATTTCTGGTTTATGGGATTTTTGAGATATGAAAAGGCATTTACAAATCTTCAGAAGGCCATTTCCATGGCTAACAATTCAATGCAACAGTTCACAGATATATCATGA MMKSFDKTPDRNSSFSEPVSSIHSPLYSDGSPSSSGNNNSKSGRKKQLIRKRGGFVFRVYEHVKLGPKFLVTAKGKLRLGAKIIQQGGRKNIFKQVFGIVEGEQLLKASQCYLSTSAGPIAGLLFISTEKVAFCSEQSITFSSPTGELLKTPYKVLIPLKKIRKANQSENVNDPAKKYIEVVTDDNFDFWFMGFLRYEKAFTNLQKAISMANNSMQQFTDIS
BLAST of CsaV3_1G007560 vs. NCBI nr
Match: XP_004137532.1 (PREDICTED: putative GEM-like protein 8 isoform X1 [Cucumis sativus] >KGN64216.1 hypothetical protein Csa_1G043190 [Cucumis sativus]) HSP 1 Score: 403.3 bits (1035), Expect = 5.4e-109 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of CsaV3_1G007560 vs. NCBI nr
Match: XP_008437022.1 (PREDICTED: GEM-like protein 4 isoform X1 [Cucumis melo]) HSP 1 Score: 375.9 bits (964), Expect = 9.2e-101 Identity = 207/221 (93.67%), Postives = 208/221 (94.12%), Query Frame = 0
BLAST of CsaV3_1G007560 vs. NCBI nr
Match: XP_011651054.1 (PREDICTED: GEM-like protein 4 isoform X2 [Cucumis sativus]) HSP 1 Score: 371.3 bits (952), Expect = 2.3e-99 Identity = 210/222 (94.59%), Postives = 210/222 (94.59%), Query Frame = 0
BLAST of CsaV3_1G007560 vs. NCBI nr
Match: XP_008437030.1 (PREDICTED: GEM-like protein 4 isoform X2 [Cucumis melo]) HSP 1 Score: 344.0 bits (881), Expect = 3.9e-91 Identity = 195/221 (88.24%), Postives = 196/221 (88.69%), Query Frame = 0
BLAST of CsaV3_1G007560 vs. NCBI nr
Match: XP_022137017.1 (GEM-like protein 4 [Momordica charantia]) HSP 1 Score: 339.0 bits (868), Expect = 1.3e-89 Identity = 169/211 (80.09%), Postives = 184/211 (87.20%), Query Frame = 0
BLAST of CsaV3_1G007560 vs. TAIR10
Match: AT5G08350.1 (GRAM domain-containing protein / ABA-responsive protein-related) HSP 1 Score: 189.1 bits (479), Expect = 2.9e-48 Identity = 92/162 (56.79%), Postives = 121/162 (74.69%), Query Frame = 0
BLAST of CsaV3_1G007560 vs. TAIR10
Match: AT5G23370.1 (GRAM domain-containing protein / ABA-responsive protein-related) HSP 1 Score: 186.8 bits (473), Expect = 1.4e-47 Identity = 92/162 (56.79%), Postives = 120/162 (74.07%), Query Frame = 0
BLAST of CsaV3_1G007560 vs. TAIR10
Match: AT5G23350.1 (GRAM domain-containing protein / ABA-responsive protein-related) HSP 1 Score: 184.1 bits (466), Expect = 9.4e-47 Identity = 90/160 (56.25%), Postives = 117/160 (73.12%), Query Frame = 0
BLAST of CsaV3_1G007560 vs. TAIR10
Match: AT5G23360.1 (GRAM domain-containing protein / ABA-responsive protein-related) HSP 1 Score: 179.1 bits (453), Expect = 3.0e-45 Identity = 87/160 (54.37%), Postives = 116/160 (72.50%), Query Frame = 0
BLAST of CsaV3_1G007560 vs. TAIR10
Match: AT2G22475.1 (GRAM domain family protein) HSP 1 Score: 133.7 bits (335), Expect = 1.4e-31 Identity = 63/160 (39.38%), Postives = 105/160 (65.62%), Query Frame = 0
BLAST of CsaV3_1G007560 vs. Swiss-Prot
Match: sp|Q9FTA0|GEML4_ARATH (GEM-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=At5g08350 PE=2 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 5.2e-47 Identity = 92/162 (56.79%), Postives = 121/162 (74.69%), Query Frame = 0
BLAST of CsaV3_1G007560 vs. Swiss-Prot
Match: sp|Q9FMW4|GEML8_ARATH (Putative GEM-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=At5g23370 PE=3 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 2.6e-46 Identity = 92/162 (56.79%), Postives = 120/162 (74.07%), Query Frame = 0
BLAST of CsaV3_1G007560 vs. Swiss-Prot
Match: sp|Q9FMW6|GEML6_ARATH (GEM-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=At5g23350 PE=2 SV=2) HSP 1 Score: 184.1 bits (466), Expect = 1.7e-45 Identity = 90/160 (56.25%), Postives = 117/160 (73.12%), Query Frame = 0
BLAST of CsaV3_1G007560 vs. Swiss-Prot
Match: sp|Q9FMW5|GEML7_ARATH (GEM-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=At5g23360 PE=2 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 5.4e-44 Identity = 87/160 (54.37%), Postives = 116/160 (72.50%), Query Frame = 0
BLAST of CsaV3_1G007560 vs. Swiss-Prot
Match: sp|Q9LYV6|GEML5_ARATH (GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 2.6e-30 Identity = 64/160 (40.00%), Postives = 100/160 (62.50%), Query Frame = 0
BLAST of CsaV3_1G007560 vs. TrEMBL
Match: tr|A0A0A0LW01|A0A0A0LW01_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G043190 PE=4 SV=1) HSP 1 Score: 403.3 bits (1035), Expect = 3.6e-109 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of CsaV3_1G007560 vs. TrEMBL
Match: tr|A0A1S3AT09|A0A1S3AT09_CUCME (GEM-like protein 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482572 PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 6.1e-101 Identity = 207/221 (93.67%), Postives = 208/221 (94.12%), Query Frame = 0
BLAST of CsaV3_1G007560 vs. TrEMBL
Match: tr|A0A1S3ATK3|A0A1S3ATK3_CUCME (GEM-like protein 4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482572 PE=4 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 2.6e-91 Identity = 195/221 (88.24%), Postives = 196/221 (88.69%), Query Frame = 0
BLAST of CsaV3_1G007560 vs. TrEMBL
Match: tr|A0A2N9HJ01|A0A2N9HJ01_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42079 PE=4 SV=1) HSP 1 Score: 283.5 bits (724), Expect = 4.1e-73 Identity = 144/214 (67.29%), Postives = 169/214 (78.97%), Query Frame = 0
BLAST of CsaV3_1G007560 vs. TrEMBL
Match: tr|W9REP8|W9REP8_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_005402 PE=4 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 6.2e-69 Identity = 131/213 (61.50%), Postives = 166/213 (77.93%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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