CmoCh17G013800 (gene) Cucurbita moschata (Rifu)

NameCmoCh17G013800
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionTransmembrane protein, putative
LocationCmo_Chr17 : 10713433 .. 10715110 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGATGAGTAGGCCTCAACAAGATCCCCGATCTGGATTTTTGCATGAGATTTCGTCTCTGCTTTTGAAAATTCTCCGATCGCCGCCCCCGCCGGTGCCATTTGCAGATCATGTGCTGGAATTATCTTCCGCTATTTCGTCTTCCTCGATAACTTTTCCTTCGTCCCAGATGTCACCGACTGGATTCGCGGCGCTGCTTTTGGGGATTTCGCTGGCTTTGATGCTCTGTGGATCGGTTACCTTCTTCCTTGGCTTCATGTTGATGCCCTGGATTCTCGTTTTCGTTATGATTTTCTACATGGTTGGGATCGTTTCTAGCGTCTCTATGTTGGGACGCTCTATACTTTGTTGTTTCACAGCTCCAACACCCCGGAAAGATTTTCATGGCGAGTTTCTTTTCTGCCTCTGTTTCCTTGTGTTTATTAGATTTGGTTTTTGCTTCATTTCCTTATCTGAATCTTGTTGCTTGAAGTTTGATTTCACTAATATATGCATATTATCTGCATGTCTGAATTTTCTCAAGGCTTCTGCCTTTTCTTATGCAAAATTCGTATCTATTTGCCCATTGCCTTGCGAAGTATCTTGTCAATAATTGATGTTTACTTCGTTTTGTATGCTTTGTTACCTGAATTTTCTCTATGGAAGTTGTTATTATAGTCAATATAAACACATGTTTGTGTATGTGTCAAAATTTTCAAAGGATTGTGAGATTTGGTAAGTCGGTGTTGTAATGGTTAGGATGGGGATAGCGACTTCGATCTGTGGGTTATAACATATGATAAGCCTTGATGTCTATTGTAGCTACACGTGAATTAATGAGGTGGGCCGTGAGTGTAAATGCAAGGAGTGGATTTAGATACCCCCAATATTAGAAAAAAGAGAGTAGAAGAGGAATATCTGGCTATATCTTGTTCAGTAACGTCAGAATTTTCTTGTCTTTTAATGTTTGCTCTCTTGATTTTGTAGTTTGAATTTTGTTAACGAAGGTTGGCTATATCAATACGCACACATGTATAAATCTGAATTTTCTTAGGCTTCTGTTTCTGGTTGTGCCAGATTCGTTACTACCTTGTACAATAACTAGTGAACGAGTCATTTGCCATATTACAGGAAGAATTTAAAGGAAATTTTAGCTAGGCTAGTACTTTATCAAATGCAAGAATATTAATGCTGTATTGCCTATATGATATCTTGGTAATTATTTTCTCATACTTCCATCGATGCATTCAAATTCCATGTAGACGCCAAGTATGAGAATGCTTAATTATTATTATTATTATTTTTTTTTTTTGAATTTGGGTGTTTTGTGTACATACACGTTCAGCATGCTTGAATTTGTAGGACTTCTTGTACTTGAATTTTTTGGATTTCTGGTACTTGAATTCTTATAATTGGTATTCATCTCTGTTATTTGGAGTTTGGAGGGATTAGGTTGGGTTTGCTCGTAGCGCCAACTGAATTTTATGTATCTGCTCTGTGTCGGAAGCCTACTTTTGAATAGAGGTTGCAGCATATAACTATTGTTTCAAGTTTTAAGCAATTTTTTGCAGTACCGATAAATTTGATCATTTTGTGGCATGCTCTTGTTTATTAACTTTGTTTATTTGTTATTATTGTTGCTGCAGCTTGGGAACAAATGTAAATATGAAGTGGCTTTGGTTCAACCAGAAGGTTAA

mRNA sequence

ATGACGATGAGTAGGCCTCAACAAGATCCCCGATCTGGATTTTTGCATGAGATTTCGTCTCTGCTTTTGAAAATTCTCCGATCGCCGCCCCCGCCGGTGCCATTTGCAGATCATGTGCTGGAATTATCTTCCGCTATTTCGTCTTCCTCGATAACTTTTCCTTCGTCCCAGATGTCACCGACTGGATTCGCGGCGCTGCTTTTGGGGATTTCGCTGGCTTTGATGCTCTGTGGATCGGTTACCTTCTTCCTTGGCTTCATGTTGATGCCCTGGATTCTCGTTTTCGTTATGATTTTCTACATGGTTGGGATCGTTTCTAGCGTCTCTATGTTGGGACGCTCTATACTTTGTTGTTTCACAGCTCCAACACCCCGGAAAGATTTTCATGGCGAGTTTCTTTTCTGCCTCTGTTTCCTTCTTGGGAACAAATGTAAATATGAAGTGGCTTTGGTTCAACCAGAAGGTTAA

Coding sequence (CDS)

ATGACGATGAGTAGGCCTCAACAAGATCCCCGATCTGGATTTTTGCATGAGATTTCGTCTCTGCTTTTGAAAATTCTCCGATCGCCGCCCCCGCCGGTGCCATTTGCAGATCATGTGCTGGAATTATCTTCCGCTATTTCGTCTTCCTCGATAACTTTTCCTTCGTCCCAGATGTCACCGACTGGATTCGCGGCGCTGCTTTTGGGGATTTCGCTGGCTTTGATGCTCTGTGGATCGGTTACCTTCTTCCTTGGCTTCATGTTGATGCCCTGGATTCTCGTTTTCGTTATGATTTTCTACATGGTTGGGATCGTTTCTAGCGTCTCTATGTTGGGACGCTCTATACTTTGTTGTTTCACAGCTCCAACACCCCGGAAAGATTTTCATGGCGAGTTTCTTTTCTGCCTCTGTTTCCTTCTTGGGAACAAATGTAAATATGAAGTGGCTTTGGTTCAACCAGAAGGTTAA
BLAST of CmoCh17G013800 vs. TrEMBL
Match: A0A0A0KDL5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G095290 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 4.1e-50
Identity = 110/129 (85.27%), Postives = 118/129 (91.47%), Query Frame = 1

Query: 3   MSRPQQDPRSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAI-SSSSITFPSSQMSPT 62
           M   +QDPRSG  +EISSLLLKILRSPPPPVPF+DHVLELSSAI SSSS   PSSQM+P 
Sbjct: 1   MIMARQDPRSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAITSSSSRILPSSQMTPA 60

Query: 63  GFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFYMVGIVSSVSMLGRSILCCFTA 122
           GFAALLLGISLALMLCGSVTFFLGFMLMPWILV VMIFY+VGIVSS+SMLGRS++CCFTA
Sbjct: 61  GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMIFYVVGIVSSLSMLGRSLICCFTA 120

Query: 123 PTPRKDFHG 131
           PTPRKDFHG
Sbjct: 121 PTPRKDFHG 129

BLAST of CmoCh17G013800 vs. TrEMBL
Match: W9QTR9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017445 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.0e-32
Identity = 82/129 (63.57%), Postives = 99/129 (76.74%), Query Frame = 1

Query: 3   MSRPQQDPRSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMSPTG 62
           M R QQD +SG L+E+SSL+L ILRSPP P+PF+DH L   +  S  S      Q+SP G
Sbjct: 1   MMRRQQDQQSGVLYELSSLVLNILRSPPSPIPFSDHSLPAPAPASVQSSRRSLQQISPAG 60

Query: 63  FAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFYMVGIVSSVSMLGRSILCCFTAP 122
           FA+LLLGISLALMLCGSVTFF+GF+LMPW+L  VM+FY+ GIVSS+SMLGRS+LC  TAP
Sbjct: 61  FASLLLGISLALMLCGSVTFFIGFILMPWVLGLVMVFYVAGIVSSLSMLGRSLLCYATAP 120

Query: 123 -TPRKDFHG 131
            T RK+  G
Sbjct: 121 STQRKEIPG 129

BLAST of CmoCh17G013800 vs. TrEMBL
Match: A0A067JS94_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17984 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.0e-29
Identity = 72/126 (57.14%), Postives = 95/126 (75.40%), Query Frame = 1

Query: 3   MSRPQQDPRSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMSPTG 62
           M   QQD +S   +E+SSL+L +LRSPP P+P +D  L + S  +    +  ++Q+SP G
Sbjct: 2   MRSQQQDQQSRIFYELSSLVLNLLRSPPSPIPLSDQALPVPSDSTVRRRSSATTQISPAG 61

Query: 63  FAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFYMVGIVSSVSMLGRSILC-CFTA 122
           FA+L+LGISLALMLCGSVTFF+GFMLMPW+L  VM+FY+ GIVS++SMLGRS+LC     
Sbjct: 62  FASLMLGISLALMLCGSVTFFIGFMLMPWVLGLVMVFYVAGIVSTISMLGRSLLCYALAP 121

Query: 123 PTPRKD 128
           P+PRKD
Sbjct: 122 PSPRKD 127

BLAST of CmoCh17G013800 vs. TrEMBL
Match: M5XFV1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013147mg PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 9.9e-28
Identity = 73/130 (56.15%), Postives = 101/130 (77.69%), Query Frame = 1

Query: 1   MTMSRPQQDPRSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSS--QM 60
           M   + QQD +S   +E+S+L+L +LRSPP P+ F+DH   + S+  SSS   P++  Q+
Sbjct: 1   MMRRQDQQDQQSRVFYELSALVLNLLRSPPTPIQFSDHSPVVPSSSPSSSRRPPAAATQI 60

Query: 61  SPTGFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFYMVGIVSSVSMLGRSILCC 120
           SP GFA+L+LGIS+ALMLCGSVTFF+GF+LMPW+L  VM+FY+ GIVSS+S+LG+SILC 
Sbjct: 61  SPAGFASLMLGISMALMLCGSVTFFIGFILMPWVLGLVMVFYVAGIVSSLSVLGKSILCY 120

Query: 121 FTAP-TPRKD 128
            +AP +PRK+
Sbjct: 121 ASAPSSPRKE 130

BLAST of CmoCh17G013800 vs. TrEMBL
Match: A0A164THQ7_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_024672 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 9.9e-28
Identity = 73/128 (57.03%), Postives = 96/128 (75.00%), Query Frame = 1

Query: 7   QQDPRSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPS-SQMSPTGFAA 66
           +QD +S   HE+S+L+L ILRSPP P+ F+DH        S +S   PS  Q++P GFA+
Sbjct: 4   RQDQQSRVFHELSALILNILRSPPTPIHFSDH--------SPASPRRPSLPQLTPAGFAS 63

Query: 67  LLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFYMVGIVSSVSMLGRSILC-CFTAPTP 126
           LLLGISLA+MLCGSVTFF+GF+LMPW++  V++FY VGIVSS+SM+GR+ILC   + P+P
Sbjct: 64  LLLGISLAMMLCGSVTFFIGFLLMPWVIGLVLVFYFVGIVSSLSMIGRAILCYTLSPPSP 123

Query: 127 RKDFHGEF 133
           RKD  G F
Sbjct: 124 RKDVPGTF 123

BLAST of CmoCh17G013800 vs. TAIR10
Match: AT1G27290.1 (AT1G27290.1 unknown protein)

HSP 1 Score: 116.3 bits (290), Expect = 1.7e-26
Identity = 67/130 (51.54%), Postives = 93/130 (71.54%), Query Frame = 1

Query: 3   MSRPQQDPRSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISS--SSITFPSSQ--- 62
           M R + + +S   +++SSL+L +LRSPP P+   DH  +  + I    SS  F SS    
Sbjct: 2   MRRQRDEQQSRVFYDLSSLVLNLLRSPPMPISLPDHFPDPPARIRPPFSSHRFSSSSPSL 61

Query: 63  --MSPTGFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFYMVGIVSSVSMLGRSI 122
             +SP+GFA+LLLGIS+ALMLCGSVTFF+GF+LMPW+L  +++FY+ GIVS++SM+GRSI
Sbjct: 62  AHISPSGFASLLLGISVALMLCGSVTFFIGFLLMPWVLALILVFYVAGIVSAISMVGRSI 121

Query: 123 LC-CFTAPTP 125
           LC   T P+P
Sbjct: 122 LCYVLTPPSP 131

BLAST of CmoCh17G013800 vs. NCBI nr
Match: gi|659119789|ref|XP_008459845.1| (PREDICTED: uncharacterized protein LOC103498845 [Cucumis melo])

HSP 1 Score: 208.0 bits (528), Expect = 1.2e-50
Identity = 110/129 (85.27%), Postives = 118/129 (91.47%), Query Frame = 1

Query: 3   MSRPQQDPRSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITF-PSSQMSPT 62
           M+  QQDPRSG  HEISSLLLKILRSPPPPVPF+DHVLELSS ISSSS    PSSQM+P 
Sbjct: 1   MNMAQQDPRSGVFHEISSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQMTPA 60

Query: 63  GFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFYMVGIVSSVSMLGRSILCCFTA 122
           GFAALLLGISLALMLCGSVTFFLGFMLMPWILV VMIFY+VGIVSS+S+LGRS++CCFTA
Sbjct: 61  GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMIFYVVGIVSSLSVLGRSLICCFTA 120

Query: 123 PTPRKDFHG 131
           PTPRKDFHG
Sbjct: 121 PTPRKDFHG 129

BLAST of CmoCh17G013800 vs. NCBI nr
Match: gi|449467041|ref|XP_004151234.1| (PREDICTED: uncharacterized protein LOC101208751 [Cucumis sativus])

HSP 1 Score: 205.7 bits (522), Expect = 5.9e-50
Identity = 110/129 (85.27%), Postives = 118/129 (91.47%), Query Frame = 1

Query: 3   MSRPQQDPRSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAI-SSSSITFPSSQMSPT 62
           M   +QDPRSG  +EISSLLLKILRSPPPPVPF+DHVLELSSAI SSSS   PSSQM+P 
Sbjct: 1   MIMARQDPRSGVFYEISSLLLKILRSPPPPVPFSDHVLELSSAITSSSSRILPSSQMTPA 60

Query: 63  GFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFYMVGIVSSVSMLGRSILCCFTA 122
           GFAALLLGISLALMLCGSVTFFLGFMLMPWILV VMIFY+VGIVSS+SMLGRS++CCFTA
Sbjct: 61  GFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMIFYVVGIVSSLSMLGRSLICCFTA 120

Query: 123 PTPRKDFHG 131
           PTPRKDFHG
Sbjct: 121 PTPRKDFHG 129

BLAST of CmoCh17G013800 vs. NCBI nr
Match: gi|703077639|ref|XP_010090643.1| (hypothetical protein L484_017445 [Morus notabilis])

HSP 1 Score: 147.9 bits (372), Expect = 1.5e-32
Identity = 82/129 (63.57%), Postives = 99/129 (76.74%), Query Frame = 1

Query: 3   MSRPQQDPRSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMSPTG 62
           M R QQD +SG L+E+SSL+L ILRSPP P+PF+DH L   +  S  S      Q+SP G
Sbjct: 1   MMRRQQDQQSGVLYELSSLVLNILRSPPSPIPFSDHSLPAPAPASVQSSRRSLQQISPAG 60

Query: 63  FAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFYMVGIVSSVSMLGRSILCCFTAP 122
           FA+LLLGISLALMLCGSVTFF+GF+LMPW+L  VM+FY+ GIVSS+SMLGRS+LC  TAP
Sbjct: 61  FASLLLGISLALMLCGSVTFFIGFILMPWVLGLVMVFYVAGIVSSLSMLGRSLLCYATAP 120

Query: 123 -TPRKDFHG 131
            T RK+  G
Sbjct: 121 STQRKEIPG 129

BLAST of CmoCh17G013800 vs. NCBI nr
Match: gi|1009152850|ref|XP_015894320.1| (PREDICTED: uncharacterized protein LOC107428312 [Ziziphus jujuba])

HSP 1 Score: 142.1 bits (357), Expect = 8.0e-31
Identity = 77/126 (61.11%), Postives = 99/126 (78.57%), Query Frame = 1

Query: 3   MSRPQQDPRSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMSPTG 62
           M R QQD +S   +E+S+L+L ILRSPP P+PF+DH         SS+   P++Q+SP G
Sbjct: 1   MMRRQQDQQSRVFYELSALVLNILRSPPSPIPFSDHSPVTPPPPVSSTRRSPAAQISPAG 60

Query: 63  FAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFYMVGIVSSVSMLGRSILCCFTAP 122
           FA+LLLGISLALMLCGSVTFF+GF+LMPW+L  VM+FY+ G++S++SMLGRSILC  TAP
Sbjct: 61  FASLLLGISLALMLCGSVTFFIGFILMPWVLGLVMVFYVAGMISALSMLGRSILCYATAP 120

Query: 123 -TPRKD 128
            TPRK+
Sbjct: 121 STPRKE 126

BLAST of CmoCh17G013800 vs. NCBI nr
Match: gi|643714161|gb|KDP26826.1| (hypothetical protein JCGZ_17984 [Jatropha curcas])

HSP 1 Score: 136.0 bits (341), Expect = 5.8e-29
Identity = 72/126 (57.14%), Postives = 95/126 (75.40%), Query Frame = 1

Query: 3   MSRPQQDPRSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMSPTG 62
           M   QQD +S   +E+SSL+L +LRSPP P+P +D  L + S  +    +  ++Q+SP G
Sbjct: 2   MRSQQQDQQSRIFYELSSLVLNLLRSPPSPIPLSDQALPVPSDSTVRRRSSATTQISPAG 61

Query: 63  FAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFYMVGIVSSVSMLGRSILC-CFTA 122
           FA+L+LGISLALMLCGSVTFF+GFMLMPW+L  VM+FY+ GIVS++SMLGRS+LC     
Sbjct: 62  FASLMLGISLALMLCGSVTFFIGFMLMPWVLGLVMVFYVAGIVSTISMLGRSLLCYALAP 121

Query: 123 PTPRKD 128
           P+PRKD
Sbjct: 122 PSPRKD 127

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KDL5_CUCSA4.1e-5085.27Uncharacterized protein OS=Cucumis sativus GN=Csa_6G095290 PE=4 SV=1[more]
W9QTR9_9ROSA1.0e-3263.57Uncharacterized protein OS=Morus notabilis GN=L484_017445 PE=4 SV=1[more]
A0A067JS94_JATCU4.0e-2957.14Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17984 PE=4 SV=1[more]
M5XFV1_PRUPE9.9e-2856.15Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013147mg PE=4 SV=1[more]
A0A164THQ7_DAUCA9.9e-2857.03Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_024672 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G27290.11.7e-2651.54 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659119789|ref|XP_008459845.1|1.2e-5085.27PREDICTED: uncharacterized protein LOC103498845 [Cucumis melo][more]
gi|449467041|ref|XP_004151234.1|5.9e-5085.27PREDICTED: uncharacterized protein LOC101208751 [Cucumis sativus][more]
gi|703077639|ref|XP_010090643.1|1.5e-3263.57hypothetical protein L484_017445 [Morus notabilis][more]
gi|1009152850|ref|XP_015894320.1|8.0e-3161.11PREDICTED: uncharacterized protein LOC107428312 [Ziziphus jujuba][more]
gi|643714161|gb|KDP26826.1|5.8e-2957.14hypothetical protein JCGZ_17984 [Jatropha curcas][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh17G013800.1CmoCh17G013800.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34781FAMILY NOT NAMEDcoord: 1..127
score: 8.2
NoneNo IPR availablePANTHERPTHR34781:SF2SUBFAMILY NOT NAMEDcoord: 1..127
score: 8.2