Carg05005 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05005
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Transmembrane protein
Location	Cucurbita_argyrosperma_scaffold_060 : 769566 .. 772053 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTTAATTCATTCTATAATTCTTCACTTTTCCGCTGGATAAGGTCCCATATGATCCGGACTCCTCTAAATCCCGCTTGACCTGCTCTCCACCGTGTCTAATCCACGCGTTGTTCTTCTCTGAGTTTTCCATTTTTGGCTTCCTCGATTCTCGGTGCGGATAATTTTCCTTTTTCTTTTAGTTTCCTTTCTTTCCATCCAAACAGACTTTAATCCGAGAAAATCCATTAACTGGACTCGGATTCCTTTCGCCGCACCATTTCACAGCCTACTTCTCTCTCTAATTTACTCCCATTTTCCGTTTCCCAGCTCGTTAATCCAACCTTCTCTTTGCACTCTCTTCTGATCGAAGCCGCTATGATTTTCACCACCAAAACCGTTCTGGGATTTCGTTGATTTGATTGGTTCATCGTTTATAGTTAGCCAATTGTCTCGGATTTAGCGATCTCCGGAGATCGTTTGATTTTGCGCTCTTTGTTGGGGTTTTCTTCTTGTTGTTCTTGTTTCGAGGTGAAGGATAGTGATGATGAGTAGGTCTCAAGAAGATCCGCAATCTGGAGTTGGGGTTTTGCATGAGGTTTCGTCTCTGCTTTTGAAAATTCTCCGATCGCCGCCCCCGCCGGTGGCTTTTTCCGATCATGTTCTGGAATTGTCTTCCGTTATTTCGTCGTCGTCGTCGAGAATTTTGCCTTCGTCGCAGATGACATCAGCTGGATTTGCGTCGCTGCTTTTGGGGATTTCGCTGGCTTTGATGCTCTGTGGATCGGTTACTTTCTTTCTGGGCTTCATCTTGATGCCTTGGATTCTCGTTTTCGCGATGATTTTCTATGTGGTTGGGATCGTTTCTAGCCTCTCGATGTTGGGACGCTCTATGCTTTGCTGTTTAACCGCTCCAATGCCCCGGAAAGATTTCAATGGTGAATTTCTCATCTGCCTCTGTTTCCTTCTTCTATTGGATTTTATTTTTGCTTCATTTCCTTATCTGAATGTTCTTGCTGGATGTTTGTTATCATCAATACTTGCATATTATCTTTATCTCTGAATTCTCTTATGGCTTCTGCTTGTGAAATATTCGTTGTATCTTGTTCATTGCCTTGCCAATTATCTTGTCAATAATTGATGTTTACTTCGTTTCTTGGATTGATATTGGTACGATCTGACTCATTACTAAAGGTATCCTGAACCTGACACATCTCGCCCATTTCTGATATACAAAGTATCAGATTTTGTGGGAAATTTTGAACCAGACCATTTATACATCGTGGGGCTTCTTCGATAGAAGAGCTTTTTTTGTCTCAGTCCCAATTCAAGAATAAACAAGTCCGAACTAATTGAATTCAATTTTCTCTAAGGCTTGTTAGATATGGTAGGTGTGGCTGTGTGGTAAGGGCTTGAGATGGGGATACCCTCTAAGATCTGTGGGTTCAAGTTGTTGAAAATATGATAGCACTTTGGAGCTTTTATGTGAATTAATGAGGTGGGCCGTGAGAATAATTCACAGAATGGGTCTAGATGACCCCGATATTCAATAACTTGTTCATTAACTTGTGAACTTTCCTTCCAATAAATTGATGTGATTTTGCTCTGTGATTTTTCTTAATGAATGCACACGCATATATAAATCTGAAAGGGAAATTTAGCTAGGCTAGTTCTTTATCAAGTGGAAGAGTGAGAAATATCACCCATACGTTGGCGTTTATTTTCTCGTGCTTCCATCGATGCATTTGAATTCCTTGCAGTCGCCTAGTACGAGCATGCTTGAATGTTTAGGTCAGGTATATGGGGGTGGTTTTTTTGTAAGCATAAAGTGAATTGTGCCTCTGCTTTTGTCCAAAGATTGTTGTTTGAAGTTGCTAAAGCAATTTTCTGCGGTATCGACGAATTTGATTGTTTTGTGGGCTTGTGTGATCGGTGCTTGTTCTCAACGAAAGCTCGGTTTCTTATAAATGCGTATGTTCGTGTGACTGGTGCTTAGAATATTGTAGGTTATTGAGTTTGTTTATTTGTTATTATTGTTGCTGCAGCTTGGAAACAAATGTAAATATGAAGAAACCTTGGTTCAACCGAACCAGATAGTTGAATTGTTTGCGAGAGGATGGAGCGCGCGGGGCTTACAGGAGAAACCGAGTAAAGGTGCCCTTGTGAATGAATGGTGCTGCCTCTAGAAACATATAGGCAAGATGAAGTTTGAATTATTTACCACCGTTTGTTGTTTTTTTGAGGTTGTGGAGTGACATTGTGTTGTGTATCTTCCTGCTTTTAAGACTTTTTTGAGTCCATATGTGTAACTGCCACTGTTTGAAATGCCTGTTAGGCTATAAAACAAAAAGAAATAAAAAATGTCGTAACAATTGTGAAGGTTCATTTTCATGGTGTCGGAGGTTTTGTGATGTCCCATGCGATGTCCCACGTTGGTTGGGGAGGAGACCAAAACACCCGTTATAGGGTGTGAAAACCTTTCCCTAGCAAACGCGTTTTAAAACTTTGAGG

mRNA sequence

CGTTAATTCATTCTATAATTCTTCACTTTTCCGCTGGATAAGGTCCCATATGATCCGGACTCCTCTAAATCCCGCTTGACCTGCTCTCCACCGTGTCTAATCCACGCGTTGTTCTTCTCTGAGTTTTCCATTTTTGGCTTCCTCGATTCTCGGTGCGGATAATTTTCCTTTTTCTTTTAGTTTCCTTTCTTTCCATCCAAACAGACTTTAATCCGAGAAAATCCATTAACTGGACTCGGATTCCTTTCGCCGCACCATTTCACAGCCTACTTCTCTCTCTAATTTACTCCCATTTTCCGTTTCCCAGCTCGTTAATCCAACCTTCTCTTTGCACTCTCTTCTGATCGAAGCCGCTATGATTTTCACCACCAAAACCGTTCTGGGATTTCGTTGATTTGATTGGTTCATCGTTTATAGTTAGCCAATTGTCTCGGATTTAGCGATCTCCGGAGATCGTTTGATTTTGCGCTCTTTGTTGGGGTTTTCTTCTTGTTGTTCTTGTTTCGAGGTGAAGGATAGTGATGATGAGTAGGTCTCAAGAAGATCCGCAATCTGGAGTTGGGGTTTTGCATGAGGTTTCGTCTCTGCTTTTGAAAATTCTCCGATCGCCGCCCCCGCCGGTGGCTTTTTCCGATCATGTTCTGGAATTGTCTTCCGTTATTTCGTCGTCGTCGTCGAGAATTTTGCCTTCGTCGCAGATGACATCAGCTGGATTTGCGTCGCTGCTTTTGGGGATTTCGCTGGCTTTGATGCTCTGTGGATCGGTTACTTTCTTTCTGGGCTTCATCTTGATGCCTTGGATTCTCGTTTTCGCGATGATTTTCTATGTGGTTGGGATCGTTTCTAGCCTCTCGATGTTGGGACGCTCTATGCTTTGCTGTTTAACCGCTCCAATGCCCCGGAAAGATTTCAATGTTGCTAAAGCAATTTTCTGCGGTATCGACGAATTTGATTGTTTTCTTGGAAACAAATGTAAATATGAAGAAACCTTGGTTCAACCGAACCAGATAGTTGAATTGTTTGCGAGAGGATGGAGCGCGCGGGGCTTACAGGAGAAACCGAGTAAAGGTGCCCTTGTGAATGAATGGTGCTGCCTCTAGAAACATATAGGCAAGATGAAGTTTGAATTATTTACCACCGTTTGTTGTTTTTTTGAGGTTGTGGAGTGACATTGTGTTGTGTATCTTCCTGCTTTTAAGACTTTTTTGAGTCCATATGTGTAACTGCCACTGTTTGAAATGCCTGTTAGGCTATAAAACAAAAAGAAATAAAAAATGTCGTAACAATTGTGAAGGTTCATTTTCATGGTGTCGGAGGTTTTGTGATGTCCCATGCGATGTCCCACGTTGGTTGGGGAGGAGACCAAAACACCCGTTATAGGGTGTGAAAACCTTTCCCTAGCAAACGCGTTTTAAAACTTTGAGG

Coding sequence (CDS)

ATGATGAGTAGGTCTCAAGAAGATCCGCAATCTGGAGTTGGGGTTTTGCATGAGGTTTCGTCTCTGCTTTTGAAAATTCTCCGATCGCCGCCCCCGCCGGTGGCTTTTTCCGATCATGTTCTGGAATTGTCTTCCGTTATTTCGTCGTCGTCGTCGAGAATTTTGCCTTCGTCGCAGATGACATCAGCTGGATTTGCGTCGCTGCTTTTGGGGATTTCGCTGGCTTTGATGCTCTGTGGATCGGTTACTTTCTTTCTGGGCTTCATCTTGATGCCTTGGATTCTCGTTTTCGCGATGATTTTCTATGTGGTTGGGATCGTTTCTAGCCTCTCGATGTTGGGACGCTCTATGCTTTGCTGTTTAACCGCTCCAATGCCCCGGAAAGATTTCAATGTTGCTAAAGCAATTTTCTGCGGTATCGACGAATTTGATTGTTTTCTTGGAAACAAATGTAAATATGAAGAAACCTTGGTTCAACCGAACCAGATAGTTGAATTGTTTGCGAGAGGATGGAGCGCGCGGGGCTTACAGGAGAAACCGAGTAAAGGTGCCCTTGTGAATGAATGGTGCTGCCTCTAG

Protein sequence

MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCCLTAPMPRKDFNVAKAIFCGIDEFDCFLGNKCKYEETLVQPNQIVELFARGWSARGLQEKPSKGALVNEWCCL

Homology

[Close]

BLAST of Carg05005 vs. NCBI nr
Match: XP_022960441.1 (uncharacterized protein LOC111461173 [Cucurbita moschata])

HSP 1 Score: 242.3 bits (617), Expect = 1.4e-60
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQM 60
           MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQM
Sbjct: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQM 60

Query: 61  TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC 120
           TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC
Sbjct: 61  TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC 120

Query: 121 LTAPMPRKDFNVAK 135
           LTAPMPRKDFN  K
Sbjct: 121 LTAPMPRKDFNAWK 134

[Close]

BLAST of Carg05005 vs. NCBI nr
Match: XP_023515244.1 (uncharacterized protein LOC111779335 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240.4 bits (612), Expect = 5.2e-60
Identity = 131/134 (97.76%), Postives = 131/134 (97.76%), Query Frame = 0


Query: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQM 60
           MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPV FSDHVLELSSVISSSSSRILPSSQM
Sbjct: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQM 60

Query: 61  TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC 120
           TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC
Sbjct: 61  TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC 120

Query: 121 LTAPMPRKDFNVAK 135
           LTAPMPRKDFN  K
Sbjct: 121 LTAPMPRKDFNAWK 134

[Close]

BLAST of Carg05005 vs. NCBI nr
Match: XP_023004228.1 (uncharacterized protein LOC111497622 [Cucurbita maxima])

HSP 1 Score: 235.0 bits (598), Expect = 2.2e-58
Identity = 128/134 (95.52%), Postives = 129/134 (96.27%), Query Frame = 0


Query: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQM 60
           MMSR QEDPQSGV +LHEVSSLLLKILRSPPPPV FSDHVLELSSVISSSSSRILPSSQM
Sbjct: 1   MMSRPQEDPQSGVEILHEVSSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQM 60

Query: 61  TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC 120
           TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC
Sbjct: 61  TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC 120

Query: 121 LTAPMPRKDFNVAK 135
           LTAPMPRKDFN  K
Sbjct: 121 LTAPMPRKDFNAWK 134

[Close]

BLAST of Carg05005 vs. NCBI nr
Match: XP_008459845.1 (PREDICTED: uncharacterized protein LOC103498845 [Cucumis melo])

HSP 1 Score: 201.8 bits (512), Expect = 2.1e-48
Identity = 109/130 (83.85%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 2   MSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMT 61
           M+ +Q+DP+S  GV HE+SSLLLKILRSPPPPV FSDHVLELSSVISSSSSRILPSSQMT
Sbjct: 1   MNMAQQDPRS--GVFHEISSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQMT 60

Query: 62  SAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCCL 121
            AGFA+LLLGISLALMLCGSVTFFLGF+LMPWILV  MIFYVVGIVSSLS+LGRS++CC 
Sbjct: 61  PAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMIFYVVGIVSSLSVLGRSLICCF 120

Query: 122 TAPMPRKDFN 132
           TAP PRKDF+
Sbjct: 121 TAPTPRKDFH 128

[Close]

BLAST of Carg05005 vs. NCBI nr
Match: XP_004151234.1 (PREDICTED: uncharacterized protein LOC101208751 [Cucumis sativus] >KGN46462.1 hypothetical protein Csa_6G095290 [Cucumis sativus])

HSP 1 Score: 195.7 bits (496), Expect = 1.5e-46
Identity = 106/130 (81.54%), Postives = 118/130 (90.77%), Query Frame = 0


Query: 2   MSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMT 61
           M  +++DP+S  GV +E+SSLLLKILRSPPPPV FSDHVLELSS I+SSSSRILPSSQMT
Sbjct: 1   MIMARQDPRS--GVFYEISSLLLKILRSPPPPVPFSDHVLELSSAITSSSSRILPSSQMT 60

Query: 62  SAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCCL 121
            AGFA+LLLGISLALMLCGSVTFFLGF+LMPWILV  MIFYVVGIVSSLSMLGRS++CC 
Sbjct: 61  PAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMIFYVVGIVSSLSMLGRSLICCF 120

Query: 122 TAPMPRKDFN 132
           TAP PRKDF+
Sbjct: 121 TAPTPRKDFH 128

[Close]

BLAST of Carg05005 vs. TAIR10
Match: AT1G27290.1 (unknown protein)

HSP 1 Score: 112.5 bits (280), Expect = 3.0e-25
Identity = 71/135 (52.59%), Postives = 96/135 (71.11%), Query Frame = 0


Query: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLE--------LSSVISSSSS 60
           MM R +++ QS   V +++SSL+L +LRSPP P++  DH  +         SS   SSSS
Sbjct: 1   MMRRQRDEQQS--RVFYDLSSLVLNLLRSPPMPISLPDHFPDPPARIRPPFSSHRFSSSS 60

Query: 61  RILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSM 120
             L  + ++ +GFASLLLGIS+ALMLCGSVTFF+GF+LMPW+L   ++FYV GIVS++SM
Sbjct: 61  PSL--AHISPSGFASLLLGISVALMLCGSVTFFIGFLLMPWVLALILVFYVAGIVSAISM 120

Query: 121 LGRSMLC-CLTAPMP 127
           +GRS+LC  LT P P
Sbjct: 121 VGRSILCYVLTPPSP 131

[Close]

BLAST of Carg05005 vs. TrEMBL
Match: tr|A0A1S3CB48|A0A1S3CB48_CUCME (uncharacterized protein LOC103498845 OS=Cucumis melo OX=3656 GN=LOC103498845 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.4e-48
Identity = 109/130 (83.85%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 2   MSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMT 61
           M+ +Q+DP+S  GV HE+SSLLLKILRSPPPPV FSDHVLELSSVISSSSSRILPSSQMT
Sbjct: 1   MNMAQQDPRS--GVFHEISSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQMT 60

Query: 62  SAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCCL 121
            AGFA+LLLGISLALMLCGSVTFFLGF+LMPWILV  MIFYVVGIVSSLS+LGRS++CC 
Sbjct: 61  PAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMIFYVVGIVSSLSVLGRSLICCF 120

Query: 122 TAPMPRKDFN 132
           TAP PRKDF+
Sbjct: 121 TAPTPRKDFH 128

[Close]

BLAST of Carg05005 vs. TrEMBL
Match: tr|A0A0A0KDL5|A0A0A0KDL5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095290 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 9.8e-47
Identity = 106/130 (81.54%), Postives = 118/130 (90.77%), Query Frame = 0


Query: 2   MSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMT 61
           M  +++DP+S  GV +E+SSLLLKILRSPPPPV FSDHVLELSS I+SSSSRILPSSQMT
Sbjct: 1   MIMARQDPRS--GVFYEISSLLLKILRSPPPPVPFSDHVLELSSAITSSSSRILPSSQMT 60

Query: 62  SAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCCL 121
            AGFA+LLLGISLALMLCGSVTFFLGF+LMPWILV  MIFYVVGIVSSLSMLGRS++CC 
Sbjct: 61  PAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMIFYVVGIVSSLSMLGRSLICCF 120

Query: 122 TAPMPRKDFN 132
           TAP PRKDF+
Sbjct: 121 TAPTPRKDFH 128

[Close]

BLAST of Carg05005 vs. TrEMBL
Match: tr|W9QTR9|W9QTR9_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_017445 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.9e-30
Identity = 83/127 (65.35%), Postives = 97/127 (76.38%), Query Frame = 0


Query: 2   MSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMT 61
           M R Q+D QS  GVL+E+SSL+L ILRSPP P+ FSDH L   +  S  SSR     Q++
Sbjct: 1   MMRRQQDQQS--GVLYELSSLVLNILRSPPSPIPFSDHSLPAPAPASVQSSR-RSLQQIS 60

Query: 62  SAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCCL 121
            AGFASLLLGISLALMLCGSVTFF+GFILMPW+L   M+FYV GIVSSLSMLGRS+LC  
Sbjct: 61  PAGFASLLLGISLALMLCGSVTFFIGFILMPWVLGLVMVFYVAGIVSSLSMLGRSLLCYA 120

Query: 122 TAPMPRK 129
           TAP  ++
Sbjct: 121 TAPSTQR 124

[Close]

BLAST of Carg05005 vs. TrEMBL
Match: tr|A0A2I4FYS2|A0A2I4FYS2_9ROSI (uncharacterized protein LOC109003203 OS=Juglans regia OX=51240 GN=LOC109003203 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.9e-27
Identity = 78/132 (59.09%), Postives = 99/132 (75.00%), Query Frame = 0


Query: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILP--SS 60
           MM R  +D QS   + +E+S+L+L ILRSPP P+ FS++    +   SSSS+   P  ++
Sbjct: 1   MMRRQHQDEQS--RIFYELSALVLNILRSPPSPIPFSENSQPAAMTTSSSSASRRPYSAA 60

Query: 61  QMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSML 120
           Q++ AGFASLLLGISLALMLCGSVTFF+GFILMPW+L   M+ YV GIVS++SMLGRS+L
Sbjct: 61  QISPAGFASLLLGISLALMLCGSVTFFIGFILMPWVLGLVMVLYVAGIVSTVSMLGRSLL 120

Query: 121 CCLTA-PMPRKD 130
           C  TA P PRKD
Sbjct: 121 CYATAPPTPRKD 130

[Close]

BLAST of Carg05005 vs. TrEMBL
Match: tr|A0A0A0KW01|A0A0A0KW01_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011660 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.5e-26
Identity = 76/129 (58.91%), Postives = 96/129 (74.42%), Query Frame = 0


Query: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQM 60
           MM R Q D      V +E+SSL++ ILRSPPP + F DH   +S+  +SSS R +P +Q+
Sbjct: 1   MMQRHQRDGGES-SVFYELSSLVMNILRSPPPSIPFPDHSPVVST--ASSSRRTIP-AQI 60

Query: 61  TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC 120
           T AGFASLLLGISLALMLCGSVTFF+GF++MPW++   M FYV  +VS LSM+GRS++C 
Sbjct: 61  TPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLIMFFYVAAVVSCLSMIGRSIICY 120

Query: 121 LTAPMPRKD 130
            TAP PRKD
Sbjct: 121 ATAP-PRKD 124

The following BLAST results are available for this feature:

BLAST of Carg05005 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960441.1	1.4e-60	98.51	uncharacterized protein LOC111461173 [Cucurbita moschata]	[more]
XP_023515244.1	5.2e-60	97.76	uncharacterized protein LOC111779335 [Cucurbita pepo subsp. pepo]	[more]
XP_023004228.1	2.2e-58	95.52	uncharacterized protein LOC111497622 [Cucurbita maxima]	[more]
XP_008459845.1	2.1e-48	83.85	PREDICTED: uncharacterized protein LOC103498845 [Cucumis melo]	[more]
XP_004151234.1	1.5e-46	81.54	PREDICTED: uncharacterized protein LOC101208751 [Cucumis sativus] >KGN46462.1 hy...	[more]

BLAST of Carg05005 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G27290.1	3.0e-25	52.59	unknown protein	[more]

BLAST of Carg05005 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg05005 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CB48\|A0A1S3CB48_CUCME	1.4e-48	83.85	uncharacterized protein LOC103498845 OS=Cucumis melo OX=3656 GN=LOC103498845 PE=...	[more]
tr\|A0A0A0KDL5\|A0A0A0KDL5_CUCSA	9.8e-47	81.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095290 PE=4 SV=1	[more]
tr\|W9QTR9\|W9QTR9_9ROSA	4.9e-30	65.35	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_017445 PE=4 SV=1	[more]
tr\|A0A2I4FYS2\|A0A2I4FYS2_9ROSI	3.9e-27	59.09	uncharacterized protein LOC109003203 OS=Juglans regia OX=51240 GN=LOC109003203 P...	[more]
tr\|A0A0A0KW01\|A0A0A0KW01_CUCSA	2.5e-26	58.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011660 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05005-RA	Carg05005-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34781:SF2	SUBFAMILY NOT NAMED	coord: 1..132
None	No IPR available	PANTHER	PTHR34781	FAMILY NOT NAMED	coord: 1..132

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05005	Csa6G095290	Cucumber (Chinese Long) v2	carcuB0093
Carg05005	MELO3C022314	Melon (DHL92) v3.5.1	carmeB0082
Carg05005	ClCG06G002160	Watermelon (Charleston Gray)	carwcgB0083
Carg05005	CSPI06G07840	Wild cucumber (PI 183967)	carcpiB0097
Carg05005	Cucsa.349670	Cucumber (Gy14) v1	carcgyB0096
Carg05005	CmaCh08G001750	Cucurbita maxima (Rimu)	carcmaB0112
Carg05005	CmaCh17G014390	Cucurbita maxima (Rimu)	carcmaB0106
Carg05005	CmoCh17G013800	Cucurbita moschata (Rifu)	carcmoB0114
Carg05005	CmoCh08G001780	Cucurbita moschata (Rifu)	carcmoB0119
Carg05005	Lsi09G017240	Bottle gourd (USVL1VR-Ls)	carlsiB073
Carg05005	Cp4.1LG01g11830	Cucurbita pepo (Zucchini)	carcpeB0127
Carg05005	Cp4.1LG17g10670	Cucurbita pepo (Zucchini)	carcpeB0125
Carg05005	CsGy6G007900	Cucumber (Gy14) v2	carcgybB0090
Carg05005	MELO3C022314.2	Melon (DHL92) v3.6.1	carmedB0081
Carg05005	CsaV3_6G008230	Cucumber (Chinese Long) v3	carcucB0100
Carg05005	Cla97C06G111480	Watermelon (97103) v2	carwmbB0078
Carg05005	Bhi12G002181	Wax gourd	carwgoB0091

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg05005	Carg11599	Silver-seed gourd	carcarB010

The following block(s) are covering this gene:


Gene	Organism	Block
Carg05005	Wild cucumber (PI 183967)	carcpiB0094
Carg05005	Cucumber (Chinese Long) v2	carcuB0090
Carg05005	Cucumber (Chinese Long) v3	carcucB0097
Carg05005	Melon (DHL92) v3.6.1	carmedB0083
Carg05005	Watermelon (Charleston Gray)	carwcgB0082
Carg05005	Watermelon (97103) v1	carwmB0083
Carg05005	Watermelon (97103) v2	carwmbB0077