CmoCh08G001780 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh08G001780
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Transmembrane protein, putative
Location	Cmo_Chr08 : 1051479 .. 1053847 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATCCGGACTCCTCTAAATCCCGCTTGACCTGCTCTCCACCGTGTCTAATCCACGCGTTGTTCTTCTCTGAATTTTCCATTTTTGGCTTCCTCGATTCTCGGTGCGGATAGTTTTCCTTTTTCTTTTAGTTTCCTTTCTTTCCATCCAAACAGACTTTAATCCGAGAAAATCCATTAACTGGACTCGGATTCCTTTCGCCGCACCATTTCACACCCTACTTCTCTCTCTAATTTACTCCCATTTTCCGTTTCCCAGCTCGTTAATCCAACCTTCTCTTTGCACTCTCTTCTGATCGAAGCCGCTATGAATTTCACCACCAAAACCGTTCTGGGATTTCGTTGATTTGATTGGTTCATCGTTTATGGTTAGCCAATCGTCTCGGCTTTAGCGATCTGCGGAGATCGTTTGATTTTGCGCTCTTTGTTGGGGTTTTCTTCTTGTTGTTCTTGTTTCTAGGTGAAGGATAGTGATGATGAGTAGGTCTCAAGAAGATCCGCAATCTGGAGTTGGGGTTTTGCATGAGGTTTCGTCTCTGCTTTTGAAAATTCTCCGATCGCCGCCCCCGCCGGTAGCTTTTTCCGATCATGTTCTGGAATTGTCTTCCGTTATTTCGTCGTCGTCGTCGAGAATTTTGCCTTCGTCGCAGATGACATCGGCTGGATTTGCGTCGCTGCTTTTGGGGATTTCGCTGGCTTTGATGCTCTGTGGATCGGTTACTTTCTTTCTGGGCTTCATCTTGATGCCTTGGATTCTCGTTTTCGCGATGATTTTCTATGTGGTTGGGATCGTTTCTAGCCTCTCGATGTTGGGACGCTCTATGCTTTGTTGTTTAACCGCTCCAATGCCCCGGAAAGATTTCAATGGTGAATTTCTCATCTGCCTCTGTTTCCTTCTGCTAGTGGATTTTATTTTTGTTTCATTTCCTTATCTGAATTTTCTTGCTGGATGTTTGTTATCATCAATACTTGCATATTATCTTTATCTCTGAATTCTCTTATGGCTTCTGCTTGTGAAATATTCGTTGTATCTTGTTCATTGCCTTGCCAATTATCTTGTCAATAATTGATGTTTACTTCGTTTCTTGGATTGATATTGGTGCAATCTGACTCATTATTAAAGATATCCTGAACCTGACACATCTTGCCCATTTCTGATATACAAAGTATCAGATTTTGTGGGAAATTTTGAACCCGACCATTTATACGTCGTGGGGCTTCTTCGATAGAAGAGCTTTTTTTGTCTCGGTCCCAATTCAAGAATAAACAAGTCCGAACTAATTGAATTCAATTTTCTCTAAGGCTTGTCAGATATGGTAGGTGTGGCTGTGTGGTAAGGGCTTGAGATGGGGATACCCTCTAAGATCTGTGGGTTCAAGTTGTTGAAAATATGATAGCACTTTGGAGCTTTTATGTGAATTAATGAGGTGGGCCGTGAGAATAATTCGCAGGATGGGTCTAGATGACCCCGATATTCAATAACTTGTTCAATAACTTGTGAACTTTCCTTCCAATAAATTGATGTGATTTTGCTCTGTGATTTTTCTTAATGAATGCACACGCATATATAAATCTGAAAGGGAAATTTAGCTAGGCTAGTTCTTTATCAAGTGGAAGAGTGAGAAATATCGCCCATACGTTGGCATTTATTTTCTCGTGCTTCCATCGATGCATTTGAATTCCTTGCAGTCGCCTAGTACGAGCATGCTTGAATGTTTAGGTCAGGTATTTGGGGGTAGTTTTTTTGTAAGCATAAAGTGAATTGTGCCTCTGCTTTTGTCCAAAGATTGATGTTTGAAGTTGCTAAAGCAATTTTCTGCGGTATCGACGAATTTGATTGTTTTGTGGGCTTGTGTGATCGGTGCTTGTTCTCAACGAAAGCTCGGTTTCTTATAAATGCGTATGTTCGTGTGACTGGTGCTTAGAATATTGTAGGTTATTGAGTTTGTTTATTTGTTATTATTGTTGCTGCAGCTTGGAAACAAATGTAAATATGAAGAAACCTTGGTTCAACCGAACCAGATAGTTGAATTGTTTGCGAGAGGATGGAGCGCGCGGGGCTTACAGGAGAAACCGAGTAAAGGTGCCCTTGTGAATGAATAGTGCTGCCTCTAGAAACATATAGGCAAGATGAAGTTTGAATTATTTACCACCGTTTGTTGTTTTTTGAGGTTGTGGAGTGACATTGTGTTGTGTATCTTCCTGCTTTTAAGACTTTGAGTCCATATGTGTAACTGCCACTGTTTGAAATGCCTGTTAGGCTATAAAACAAAAAGAAATAAAAAATGTCGTAACAATTGTGAAGGTTCATTTTCATGGTGTCGGAGGTTTTGTGATGTCCCATGTGATGTCCCACGTTGGTTGGGGAGGAG

mRNA sequence

GATCCGGACTCCTCTAAATCCCGCTTGACCTGCTCTCCACCGTGTCTAATCCACGCGTTGTTCTTCTCTGAATTTTCCATTTTTGGCTTCCTCGATTCTCGGTGCGGATAGTTTTCCTTTTTCTTTTAGTTTCCTTTCTTTCCATCCAAACAGACTTTAATCCGAGAAAATCCATTAACTGGACTCGGATTCCTTTCGCCGCACCATTTCACACCCTACTTCTCTCTCTAATTTACTCCCATTTTCCGTTTCCCAGCTCGTTAATCCAACCTTCTCTTTGCACTCTCTTCTGATCGAAGCCGCTATGAATTTCACCACCAAAACCGTTCTGGGATTTCGTTGATTTGATTGGTTCATCGTTTATGGTTAGCCAATCGTCTCGGCTTTAGCGATCTGCGGAGATCGTTTGATTTTGCGCTCTTTGTTGGGGTTTTCTTCTTGTTGTTCTTGTTTCTAGGTGAAGGATAGTGATGATGAGTAGGTCTCAAGAAGATCCGCAATCTGGAGTTGGGGTTTTGCATGAGGTTTCGTCTCTGCTTTTGAAAATTCTCCGATCGCCGCCCCCGCCGGTAGCTTTTTCCGATCATGTTCTGGAATTGTCTTCCGTTATTTCGTCGTCGTCGTCGAGAATTTTGCCTTCGTCGCAGATGACATCGGCTGGATTTGCGTCGCTGCTTTTGGGGATTTCGCTGGCTTTGATGCTCTGTGGATCGGTTACTTTCTTTCTGGGCTTCATCTTGATGCCTTGGATTCTCGTTTTCGCGATGATTTTCTATGTGGTTGGGATCGTTTCTAGCCTCTCGATGTTGGGACGCTCTATGCTTTGTTGTTTAACCGCTCCAATGCCCCGGAAAGATTTCAATGGTCAGCTTGGAAACAAATGTAAATATGAAGAAACCTTGGTTCAACCGAACCAGATAGTTGAATTGTTTGCGAGAGGATGGAGCGCGCGGGGCTTACAGGAGAAACCGAGTAAAGGTGCCCTTGTGAATGAATAGTGCTGCCTCTAGAAACATATAGGCAAGATGAAGTTTGAATTATTTACCACCGTTTGTTGTTTTTTGAGGTTGTGGAGTGACATTGTGTTGTGTATCTTCCTGCTTTTAAGACTTTGAGTCCATATGTGTAACTGCCACTGTTTGAAATGCCTGTTAGGCTATAAAACAAAAAGAAATAAAAAATGTCGTAACAATTGTGAAGGTTCATTTTCATGGTGTCGGAGGTTTTGTGATGTCCCATGTGATGTCCCACGTTGGTTGGGGAGGAG

Coding sequence (CDS)

ATGATGAGTAGGTCTCAAGAAGATCCGCAATCTGGAGTTGGGGTTTTGCATGAGGTTTCGTCTCTGCTTTTGAAAATTCTCCGATCGCCGCCCCCGCCGGTAGCTTTTTCCGATCATGTTCTGGAATTGTCTTCCGTTATTTCGTCGTCGTCGTCGAGAATTTTGCCTTCGTCGCAGATGACATCGGCTGGATTTGCGTCGCTGCTTTTGGGGATTTCGCTGGCTTTGATGCTCTGTGGATCGGTTACTTTCTTTCTGGGCTTCATCTTGATGCCTTGGATTCTCGTTTTCGCGATGATTTTCTATGTGGTTGGGATCGTTTCTAGCCTCTCGATGTTGGGACGCTCTATGCTTTGTTGTTTAACCGCTCCAATGCCCCGGAAAGATTTCAATGGTCAGCTTGGAAACAAATGTAAATATGAAGAAACCTTGGTTCAACCGAACCAGATAGTTGAATTGTTTGCGAGAGGATGGAGCGCGCGGGGCTTACAGGAGAAACCGAGTAAAGGTGCCCTTGTGAATGAATAG

Homology

[Close]

BLAST of CmoCh08G001780 vs. TrEMBL
Match: A0A0A0KDL5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G095290 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 7.4e-48
Identity = 107/131 (81.68%), Postives = 119/131 (90.84%), Query Frame = 1


Query: 2   MSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMT 61
           M  +++DP+SGV   +E+SSLLLKILRSPPPPV FSDHVLELSS I+SSSSRILPSSQMT
Sbjct: 1   MIMARQDPRSGV--FYEISSLLLKILRSPPPPVPFSDHVLELSSAITSSSSRILPSSQMT 60

Query: 62  SAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCCL 121
            AGFA+LLLGISLALMLCGSVTFFLGF+LMPWILV  MIFYVVGIVSSLSMLGRS++CC 
Sbjct: 61  PAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMIFYVVGIVSSLSMLGRSLICCF 120

Query: 122 TAPMPRKDFNG 133
           TAP PRKDF+G
Sbjct: 121 TAPTPRKDFHG 129

[Close]

BLAST of CmoCh08G001780 vs. TrEMBL
Match: W9QTR9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017445 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.4e-30
Identity = 86/132 (65.15%), Postives = 99/132 (75.00%), Query Frame = 1


Query: 2   MSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMT 61
           M R Q+D QSGV  L+E+SSL+L ILRSPP P+ FSDH L   +  S  SSR     Q++
Sbjct: 1   MMRRQQDQQSGV--LYELSSLVLNILRSPPSPIPFSDHSLPAPAPASVQSSR-RSLQQIS 60

Query: 62  SAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCCL 121
            AGFASLLLGISLALMLCGSVTFF+GFILMPW+L   M+FYV GIVSSLSMLGRS+LC  
Sbjct: 61  PAGFASLLLGISLALMLCGSVTFFIGFILMPWVLGLVMVFYVAGIVSSLSMLGRSLLCYA 120

Query: 122 TAP-MPRKDFNG 133
           TAP   RK+  G
Sbjct: 121 TAPSTQRKEIPG 129

[Close]

BLAST of CmoCh08G001780 vs. TrEMBL
Match: A0A164THQ7_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_024672 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 7.2e-27
Identity = 78/133 (58.65%), Postives = 97/133 (72.93%), Query Frame = 1


Query: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQM 60
           MM+R  +D QS V   HE+S+L+L ILRSPP P+ FSDH        S +S R     Q+
Sbjct: 1   MMTR--QDQQSRV--FHELSALILNILRSPPTPIHFSDH--------SPASPRRPSLPQL 60

Query: 61  TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLC- 120
           T AGFASLLLGISLA+MLCGSVTFF+GF+LMPW++   ++FY VGIVSSLSM+GR++LC 
Sbjct: 61  TPAGFASLLLGISLAMMLCGSVTFFIGFLLMPWVIGLVLVFYFVGIVSSLSMIGRAILCY 120

Query: 121 CLTAPMPRKDFNG 133
            L+ P PRKD  G
Sbjct: 121 TLSPPSPRKDVPG 121

[Close]

BLAST of CmoCh08G001780 vs. TrEMBL
Match: A0A0A0KW01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G011660 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.2e-26
Identity = 76/129 (58.91%), Postives = 96/129 (74.42%), Query Frame = 1


Query: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQM 60
           MM R Q D      V +E+SSL++ ILRSPPP + F DH   +S+  +SSS R +P+ Q+
Sbjct: 1   MMQRHQRDGGES-SVFYELSSLVMNILRSPPPSIPFPDHSPVVST--ASSSRRTIPA-QI 60

Query: 61  TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCC 120
           T AGFASLLLGISLALMLCGSVTFF+GF++MPW++   M FYV  +VS LSM+GRS++C 
Sbjct: 61  TPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLIMFFYVAAVVSCLSMIGRSIICY 120

Query: 121 LTAPMPRKD 130
            TAP PRKD
Sbjct: 121 ATAP-PRKD 124

[Close]

BLAST of CmoCh08G001780 vs. TrEMBL
Match: A0A067JS94_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17984 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.6e-26
Identity = 75/130 (57.69%), Postives = 96/130 (73.85%), Query Frame = 1


Query: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQM 60
           MM   Q+D QS +   +E+SSL+L +LRSPP P+  SD  L + S  S+   R   ++Q+
Sbjct: 1   MMRSQQQDQQSRI--FYELSSLVLNLLRSPPSPIPLSDQALPVPSD-STVRRRSSATTQI 60

Query: 61  TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLC- 120
           + AGFASL+LGISLALMLCGSVTFF+GF+LMPW+L   M+FYV GIVS++SMLGRS+LC 
Sbjct: 61  SPAGFASLMLGISLALMLCGSVTFFIGFMLMPWVLGLVMVFYVAGIVSTISMLGRSLLCY 120

Query: 121 CLTAPMPRKD 130
            L  P PRKD
Sbjct: 121 ALAPPSPRKD 127

[Close]

BLAST of CmoCh08G001780 vs. TAIR10
Match: AT1G27290.1 (AT1G27290.1 unknown protein)

HSP 1 Score: 113.2 bits (282), Expect = 1.6e-25
Identity = 71/135 (52.59%), Postives = 96/135 (71.11%), Query Frame = 1


Query: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLE--------LSSVISSSSS 60
           MM R +++ QS V   +++SSL+L +LRSPP P++  DH  +         SS   SSSS
Sbjct: 1   MMRRQRDEQQSRV--FYDLSSLVLNLLRSPPMPISLPDHFPDPPARIRPPFSSHRFSSSS 60

Query: 61  RILPSSQMTSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSM 120
             L  + ++ +GFASLLLGIS+ALMLCGSVTFF+GF+LMPW+L   ++FYV GIVS++SM
Sbjct: 61  PSL--AHISPSGFASLLLGISVALMLCGSVTFFIGFLLMPWVLALILVFYVAGIVSAISM 120

Query: 121 LGRSMLC-CLTAPMP 127
           +GRS+LC  LT P P
Sbjct: 121 VGRSILCYVLTPPSP 131

[Close]

BLAST of CmoCh08G001780 vs. NCBI nr
Match: gi|659119789|ref|XP_008459845.1| (PREDICTED: uncharacterized protein LOC103498845 [Cucumis melo])

HSP 1 Score: 204.5 bits (519), Expect = 1.5e-49
Identity = 110/131 (83.97%), Postives = 121/131 (92.37%), Query Frame = 1


Query: 2   MSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMT 61
           M+ +Q+DP+SGV   HE+SSLLLKILRSPPPPV FSDHVLELSSVISSSSSRILPSSQMT
Sbjct: 1   MNMAQQDPRSGV--FHEISSLLLKILRSPPPPVPFSDHVLELSSVISSSSSRILPSSQMT 60

Query: 62  SAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCCL 121
            AGFA+LLLGISLALMLCGSVTFFLGF+LMPWILV  MIFYVVGIVSSLS+LGRS++CC 
Sbjct: 61  PAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMIFYVVGIVSSLSVLGRSLICCF 120

Query: 122 TAPMPRKDFNG 133
           TAP PRKDF+G
Sbjct: 121 TAPTPRKDFHG 129

[Close]

BLAST of CmoCh08G001780 vs. NCBI nr
Match: gi|449467041|ref|XP_004151234.1| (PREDICTED: uncharacterized protein LOC101208751 [Cucumis sativus])

HSP 1 Score: 198.4 bits (503), Expect = 1.1e-47
Identity = 107/131 (81.68%), Postives = 119/131 (90.84%), Query Frame = 1


Query: 2   MSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMT 61
           M  +++DP+SGV   +E+SSLLLKILRSPPPPV FSDHVLELSS I+SSSSRILPSSQMT
Sbjct: 1   MIMARQDPRSGV--FYEISSLLLKILRSPPPPVPFSDHVLELSSAITSSSSRILPSSQMT 60

Query: 62  SAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCCL 121
            AGFA+LLLGISLALMLCGSVTFFLGF+LMPWILV  MIFYVVGIVSSLSMLGRS++CC 
Sbjct: 61  PAGFAALLLGISLALMLCGSVTFFLGFMLMPWILVLVMIFYVVGIVSSLSMLGRSLICCF 120

Query: 122 TAPMPRKDFNG 133
           TAP PRKDF+G
Sbjct: 121 TAPTPRKDFHG 129

[Close]

BLAST of CmoCh08G001780 vs. NCBI nr
Match: gi|703077639|ref|XP_010090643.1| (hypothetical protein L484_017445 [Morus notabilis])

HSP 1 Score: 141.0 bits (354), Expect = 2.0e-30
Identity = 86/132 (65.15%), Postives = 99/132 (75.00%), Query Frame = 1


Query: 2   MSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMT 61
           M R Q+D QSGV  L+E+SSL+L ILRSPP P+ FSDH L   +  S  SSR     Q++
Sbjct: 1   MMRRQQDQQSGV--LYELSSLVLNILRSPPSPIPFSDHSLPAPAPASVQSSR-RSLQQIS 60

Query: 62  SAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCCL 121
            AGFASLLLGISLALMLCGSVTFF+GFILMPW+L   M+FYV GIVSSLSMLGRS+LC  
Sbjct: 61  PAGFASLLLGISLALMLCGSVTFFIGFILMPWVLGLVMVFYVAGIVSSLSMLGRSLLCYA 120

Query: 122 TAP-MPRKDFNG 133
           TAP   RK+  G
Sbjct: 121 TAPSTQRKEIPG 129

[Close]

BLAST of CmoCh08G001780 vs. NCBI nr
Match: gi|1009152850|ref|XP_015894320.1| (PREDICTED: uncharacterized protein LOC107428312 [Ziziphus jujuba])

HSP 1 Score: 133.7 bits (335), Expect = 3.2e-28
Identity = 79/129 (61.24%), Postives = 100/129 (77.52%), Query Frame = 1


Query: 2   MSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQMT 61
           M R Q+D QS V   +E+S+L+L ILRSPP P+ FSDH   ++     SS+R  P++Q++
Sbjct: 1   MMRRQQDQQSRV--FYELSALVLNILRSPPSPIPFSDHS-PVTPPPPVSSTRRSPAAQIS 60

Query: 62  SAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLCCL 121
            AGFASLLLGISLALMLCGSVTFF+GFILMPW+L   M+FYV G++S+LSMLGRS+LC  
Sbjct: 61  PAGFASLLLGISLALMLCGSVTFFIGFILMPWVLGLVMVFYVAGMISALSMLGRSILCYA 120

Query: 122 TAP-MPRKD 130
           TAP  PRK+
Sbjct: 121 TAPSTPRKE 126

[Close]

BLAST of CmoCh08G001780 vs. NCBI nr
Match: gi|1021029753|gb|KZM87538.1| (hypothetical protein DCAR_024672 [Daucus carota subsp. sativus])

HSP 1 Score: 128.6 bits (322), Expect = 1.0e-26
Identity = 78/133 (58.65%), Postives = 97/133 (72.93%), Query Frame = 1


Query: 1   MMSRSQEDPQSGVGVLHEVSSLLLKILRSPPPPVAFSDHVLELSSVISSSSSRILPSSQM 60
           MM+R  +D QS V   HE+S+L+L ILRSPP P+ FSDH        S +S R     Q+
Sbjct: 1   MMTR--QDQQSRV--FHELSALILNILRSPPTPIHFSDH--------SPASPRRPSLPQL 60

Query: 61  TSAGFASLLLGISLALMLCGSVTFFLGFILMPWILVFAMIFYVVGIVSSLSMLGRSMLC- 120
           T AGFASLLLGISLA+MLCGSVTFF+GF+LMPW++   ++FY VGIVSSLSM+GR++LC 
Sbjct: 61  TPAGFASLLLGISLAMMLCGSVTFFIGFLLMPWVIGLVLVFYFVGIVSSLSMIGRAILCY 120

Query: 121 CLTAPMPRKDFNG 133
            L+ P PRKD  G
Sbjct: 121 TLSPPSPRKDVPG 121

The following BLAST results are available for this feature:

BLAST of CmoCh08G001780 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh08G001780 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDL5_CUCSA	7.4e-48	81.68	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G095290 PE=4 SV=1	[more]
W9QTR9_9ROSA	1.4e-30	65.15	Uncharacterized protein OS=Morus notabilis GN=L484_017445 PE=4 SV=1	[more]
A0A164THQ7_DAUCA	7.2e-27	58.65	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_024672 PE=4 SV=1	[more]
A0A0A0KW01_CUCSA	1.2e-26	58.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G011660 PE=4 SV=1	[more]
A0A067JS94_JATCU	1.6e-26	57.69	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17984 PE=4 SV=1	[more]

BLAST of CmoCh08G001780 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G27290.1	1.6e-25	52.59	unknown protein	[more]

BLAST of CmoCh08G001780 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119789\|ref\|XP_008459845.1\|	1.5e-49	83.97	PREDICTED: uncharacterized protein LOC103498845 [Cucumis melo]	[more]
gi\|449467041\|ref\|XP_004151234.1\|	1.1e-47	81.68	PREDICTED: uncharacterized protein LOC101208751 [Cucumis sativus]	[more]
gi\|703077639\|ref\|XP_010090643.1\|	2.0e-30	65.15	hypothetical protein L484_017445 [Morus notabilis]	[more]
gi\|1009152850\|ref\|XP_015894320.1\|	3.2e-28	61.24	PREDICTED: uncharacterized protein LOC107428312 [Ziziphus jujuba]	[more]
gi\|1021029753\|gb\|KZM87538.1\|	1.0e-26	58.65	hypothetical protein DCAR_024672 [Daucus carota subsp. sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G001780.1	CmoCh08G001780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34781	FAMILY NOT NAMED	coord: 1..150 score: 3.8
None	No IPR available	PANTHER	PTHR34781:SF2	SUBFAMILY NOT NAMED	coord: 1..150 score: 3.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh08G001780	Cucsa.349670	Cucumber (Gy14) v1	cgycmoB0953
CmoCh08G001780	CmaCh17G014390	Cucurbita maxima (Rimu)	cmacmoB370
CmoCh08G001780	CmaCh08G001750	Cucurbita maxima (Rimu)	cmacmoB913
CmoCh08G001780	Cla000690	Watermelon (97103) v1	cmowmB873
CmoCh08G001780	Csa6G095290	Cucumber (Chinese Long) v2	cmocuB883
CmoCh08G001780	MELO3C022314	Melon (DHL92) v3.5.1	cmomeB807
CmoCh08G001780	CSPI06G07840	Wild cucumber (PI 183967)	cmocpiB896
CmoCh08G001780	Lsi09G017240	Bottle gourd (USVL1VR-Ls)	cmolsiB800
CmoCh08G001780	Cp4.1LG17g10670	Cucurbita pepo (Zucchini)	cmocpeB851
CmoCh08G001780	Cp4.1LG01g11830	Cucurbita pepo (Zucchini)	cmocpeB856
CmoCh08G001780	MELO3C022314.2	Melon (DHL92) v3.6.1	cmomedB906
CmoCh08G001780	CsaV3_6G008230	Cucumber (Chinese Long) v3	cmocucB1051
CmoCh08G001780	Cla97C06G111480	Watermelon (97103) v2	cmowmbB899
CmoCh08G001780	Bhi12G002181	Wax gourd	cmowgoB1086
CmoCh08G001780	CsGy6G007900	Cucumber (Gy14) v2	cgybcmoB850
CmoCh08G001780	Carg05005	Silver-seed gourd	carcmoB0119
CmoCh08G001780	Carg11599	Silver-seed gourd	carcmoB0023

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh08G001780	CmoCh17G013800	Cucurbita moschata (Rifu)	cmocmoB315

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh08G001780	Watermelon (97103) v2	cmowmbB894
CmoCh08G001780	Watermelon (Charleston Gray)	cmowcgB798
CmoCh08G001780	Watermelon (Charleston Gray)	cmowcgB802
CmoCh08G001780	Watermelon (97103) v1	cmowmB865
CmoCh08G001780	Bottle gourd (USVL1VR-Ls)	cmolsiB806
CmoCh08G001780	Melon (DHL92) v3.6.1	cmomedB910