CmoCh17G013120 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh17G013120
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ethylene-responsive transcription factor, putative
Location	Cmo_Chr17 : 10273416 .. 10273841 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGAAAGAAAACAGGAAATGGAGGGAAGAGGTCGACAAACGAAGCTCGTTACCGAGGGATACGGCGGCGTCCATGGGGGAAATTTGCGGCGGAGATTCGTGATCCGTCGAGGAACGGCGCTCGGCTGTGGTTAGGGACATTCGACACGGCGGAGGAAGCGGCAAGAGCGTACGATCAAGCGGCGTATGCGTTCAGAGGACATTTGGCGATTCTGAATTTTCCGAATGAGTACCAAAGTGGAAACCCTCATTTCGCGGCGGCGCCTTCTTCATCAGCGACGACGATCTCTTTCGTCGGAAATTACTCCGGCAGCAATGCGAACTATCGATCGGGGGAAGTGATAGAGTTCGAGTATTTGGATAATGAACTCTTGGAGGAACTTTTGCAGTCGGAAGGAGAAGGATTTGATCGGAACAATTGA

mRNA sequence

ATGGAAGGAAAGAAAACAGGAAATGGAGGGAAGAGGTCGACAAACGAAGCTCGTTACCGAGGGATACGGCGGCGTCCATGGGGGAAATTTGCGGCGGAGATTCGTGATCCGTCGAGGAACGGCGCTCGGCTGTGGTTAGGGACATTCGACACGGCGGAGGAAGCGGCAAGAGCGTACGATCAAGCGGCGTATGCGTTCAGAGGACATTTGGCGATTCTGAATTTTCCGAATGAGTACCAAAGTGGAAACCCTCATTTCGCGGCGGCGCCTTCTTCATCAGCGACGACGATCTCTTTCGTCGGAAATTACTCCGGCAGCAATGCGAACTATCGATCGGGGGAAGTGATAGAGTTCGAGTATTTGGATAATGAACTCTTGGAGGAACTTTTGCAGTCGGAAGGAGAAGGATTTGATCGGAACAATTGA

Coding sequence (CDS)

ATGGAAGGAAAGAAAACAGGAAATGGAGGGAAGAGGTCGACAAACGAAGCTCGTTACCGAGGGATACGGCGGCGTCCATGGGGGAAATTTGCGGCGGAGATTCGTGATCCGTCGAGGAACGGCGCTCGGCTGTGGTTAGGGACATTCGACACGGCGGAGGAAGCGGCAAGAGCGTACGATCAAGCGGCGTATGCGTTCAGAGGACATTTGGCGATTCTGAATTTTCCGAATGAGTACCAAAGTGGAAACCCTCATTTCGCGGCGGCGCCTTCTTCATCAGCGACGACGATCTCTTTCGTCGGAAATTACTCCGGCAGCAATGCGAACTATCGATCGGGGGAAGTGATAGAGTTCGAGTATTTGGATAATGAACTCTTGGAGGAACTTTTGCAGTCGGAAGGAGAAGGATTTGATCGGAACAATTGA

Homology

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BLAST of CmoCh17G013120 vs. Swiss-Prot
Match: ERF98_ARATH (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana GN=ERF098 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 6.4e-35
Identity = 77/130 (59.23%), Postives = 98/130 (75.38%), Query Frame = 1


Query: 5   KTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAY 64
           ++ N   +   +AR+RG+RRRPWGKFAAEIRDPSRNGARLWLGTF+TAEEAARAYD+AA+
Sbjct: 6   RSSNNQSQDDKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAF 65

Query: 65  AFRGHLAILNFPNEYQSGNPHFAAAPS-SSATTISFVGNYSGSNANYRSGEVIEFEYLDN 124
             RGHLAILNFPNEY      ++  P  +S+++ S  G+ S + +     EV EFEYLD+
Sbjct: 66  NLRGHLAILNFPNEYYPRMDDYSLRPPYASSSSSSSSGSTSTNVSRQNQREVFEFEYLDD 125

Query: 125 ELLEELLQSE 134
           ++LEELL SE
Sbjct: 126 KVLEELLDSE 135

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BLAST of CmoCh17G013120 vs. Swiss-Prot
Match: ERF95_ARATH (Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana GN=ERF095 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.1e-30
Identity = 75/135 (55.56%), Postives = 94/135 (69.63%), Query Frame = 1


Query: 13  STNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAI 72
           +TNE +YRG+R+RPWGK+AAEIRD +R+GAR+WLGTF+TAE+AARAYD+AA+  RG  AI
Sbjct: 8   NTNEMKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAI 67

Query: 73  LNFPNEYQ------SGNPHFAAAPSSSATTISFVGNYSGSNANYRSGEVIEFEYLDNELL 132
           LNFP+EYQ      +G+   A A SSS         Y G        EVIEFEYLD+ LL
Sbjct: 68  LNFPHEYQMMKDGPNGSHENAVASSSS--------GYRGGGGGDDGREVIEFEYLDDSLL 127

Query: 133 EELLQSEGEGFDRNN 142
           EELL   GE  +++N
Sbjct: 128 EELL-DYGERSNQDN 133

[Close]

BLAST of CmoCh17G013120 vs. Swiss-Prot
Match: ERF96_ARATH (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana GN=ERF096 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.3e-29
Identity = 70/119 (58.82%), Postives = 89/119 (74.79%), Query Frame = 1


Query: 18  RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAILNFPN 77
           +YRG+RRRPWGK+AAEIRD  ++G R+WLGTFDTAEEAARAYDQAAY+ RG  AILNFP+
Sbjct: 14  KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFPH 73

Query: 78  EYQSGNPHFAAAPSSSATTISFVGNYSGS-NANYRSGEVIEFEYLDNELLEELLQSEGE 136
           EY  G        S  +++ +  G+ S S +A+  S +V EFEYLD+ +LEELL+ EGE
Sbjct: 74  EYNMG--------SGVSSSTAMAGSSSASASASSSSRQVFEFEYLDDSVLEELLE-EGE 123

[Close]

BLAST of CmoCh17G013120 vs. Swiss-Prot
Match: ERF97_ARATH (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana GN=ERF14 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.0e-28
Identity = 68/139 (48.92%), Postives = 95/139 (68.35%), Query Frame = 1


Query: 3   GKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQA 62
           G+ +G+GG     + +YRG+RRRPWGK+AAEIRD  ++G R+WLGTFDTAE+AARAYD+A
Sbjct: 5   GRSSGSGGG-GAEQGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRA 64

Query: 63  AYAFRGHLAILNFPNEYQSGNPHFAAAPSSSATTISFVGNYSGSNANYRSGEVIEFEYLD 122
           AY+ RG  AILNFP+EY  G    + A +SS++                S +V EFEYLD
Sbjct: 65  AYSMRGKAAILNFPHEYNMGTGSSSTAANSSSS----------------SQQVFEFEYLD 124

Query: 123 NELLEELLQSEGEGFDRNN 142
           + +L+ELL+  GE +++ +
Sbjct: 125 DSVLDELLE-YGENYNKTH 125

[Close]

BLAST of CmoCh17G013120 vs. Swiss-Prot
Match: EF101_ARATH (Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana GN=ERF2 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 4.0e-21
Identity = 60/127 (47.24%), Postives = 79/127 (62.20%), Query Frame = 1


Query: 19  YRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAILNFPNE 78
           YRG+R+RPWGKFAAEIRDP++NGAR+WLGTF+TAE+AA AYD AA+  RG  A+LNFP  
Sbjct: 117 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNFPLR 176

Query: 79  YQSGNP---HFAAAPSSSATTISFVGNYSGSNANYR--------SGEVIEF--EYLDNEL 133
             SG P      +  SSS+++ S     S  N   +        + EV++   E  D   
Sbjct: 177 VNSGEPDPVRITSKRSSSSSSSSSSSTSSSENGKLKRRRKAENLTSEVVQVKCEVGDETR 236

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BLAST of CmoCh17G013120 vs. TrEMBL
Match: A0A0A0KAA6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375830 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 9.5e-62
Identity = 126/148 (85.14%), Postives = 134/148 (90.54%), Query Frame = 1


Query: 1   MEGKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60
           MEGK+TGN GKRSTNE+RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD
Sbjct: 1   MEGKRTGNEGKRSTNESRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60

Query: 61  QAAYAFRGHLAILNFPNEYQSGNPHF-------AAAPSSSATTISFVGNYSGSNANYRSG 120
           QAAYAFRGHLAILNFPNEYQSGNP+F       AA+ SSS TTISF GNYSG+NA+  SG
Sbjct: 61  QAAYAFRGHLAILNFPNEYQSGNPNFGAGYGSSAASGSSSTTTISFGGNYSGNNASRGSG 120

Query: 121 EVIEFEYLDNELLEELLQSEGEGFDRNN 142
           EVIEFEYLDNELLEELLQSEGEG++R N
Sbjct: 121 EVIEFEYLDNELLEELLQSEGEGYNRKN 148

[Close]

BLAST of CmoCh17G013120 vs. TrEMBL
Match: F6HZI9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g03220 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.3e-39
Identity = 92/147 (62.59%), Postives = 107/147 (72.79%), Query Frame = 1


Query: 1   MEGKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60
           MEG      G+    E RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD
Sbjct: 1   MEGGGRRREGEDKAREVRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60

Query: 61  QAAYAFRGHLAILNFPNEYQSGNPHFAAAPSSSATTISFVGNYSGSNANY---------- 120
           +AAYAFRGHLAILNFPNE+Q  NP +    SSS+++   +G+ S S+A            
Sbjct: 61  RAAYAFRGHLAILNFPNEHQYQNPGYGQTFSSSSSSSYSLGSSSSSSAGRSTGSGASISS 120

Query: 121 --RSGEVIEFEYLDNELLEELLQSEGE 136
             + G+VIEFEYLDN LLEELL+ +G+
Sbjct: 121 RDQEGQVIEFEYLDNNLLEELLEPQGD 147

[Close]

BLAST of CmoCh17G013120 vs. TrEMBL
Match: A0A061DPX1_THECC (Integrase-type DNA-binding superfamily protein, putative OS=Theobroma cacao GN=TCM_004061 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 8.7e-39
Identity = 90/133 (67.67%), Postives = 106/133 (79.70%), Query Frame = 1


Query: 3   GKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQA 62
           GK TGN GK +  E RYRGIRRRPWGKFAAEIRDP+RNGARLWLGTF+TAEEAARAYD+A
Sbjct: 8   GKNTGNNGKGNA-EVRYRGIRRRPWGKFAAEIRDPTRNGARLWLGTFETAEEAARAYDRA 67

Query: 63  AYAFRGHLAILNFPNEYQSGNPHFAAAPSSSATTISFVGNYSGSNANYRSGEVIEFEYLD 122
           A+AFRGH AILNFPNEYQS NP F  + +SS+T     G   G+    R  EVIEFEYLD
Sbjct: 68  AFAFRGHSAILNFPNEYQSHNPIFPPSLASSST----YGVGRGNPPRGRGSEVIEFEYLD 127

Query: 123 NELLEELLQSEGE 136
           ++LLE+LL+++ +
Sbjct: 128 DKLLEDLLETQDD 135

[Close]

BLAST of CmoCh17G013120 vs. TrEMBL
Match: A5B7V7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001296 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 8.7e-39
Identity = 91/147 (61.90%), Postives = 106/147 (72.11%), Query Frame = 1


Query: 1   MEGKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60
           MEG      G+    E RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD
Sbjct: 1   MEGGGRRRXGEDKAREVRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60

Query: 61  QAAYAFRGHLAILNFPNEYQSGNPHFAAAPSSSATTISFVGNYSGSNANY---------- 120
           +AAYAFRGHLAILNFPNE+Q  NP +    SSS+++   +G+ S S+A            
Sbjct: 61  RAAYAFRGHLAILNFPNEHQYQNPGYGQTFSSSSSSSYSLGSSSSSSAGRSTGSGASISS 120

Query: 121 --RSGEVIEFEYLDNELLEELLQSEGE 136
             + G+VIEFEYLDN LLEELL+ + +
Sbjct: 121 RDQEGQVIEFEYLDNNLLEELLEPQAQ 147

[Close]

BLAST of CmoCh17G013120 vs. TrEMBL
Match: A0A0D2NAN9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G176700 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 4.3e-38
Identity = 89/134 (66.42%), Postives = 103/134 (76.87%), Query Frame = 1


Query: 2   EGKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQ 61
           EGK  GN    +  E RYRGIRRRPWGKFAAEIRDP+RNGARLWLGTF+TAEEAARAYD+
Sbjct: 6   EGKNRGN----NNGEVRYRGIRRRPWGKFAAEIRDPTRNGARLWLGTFETAEEAARAYDR 65

Query: 62  AAYAFRGHLAILNFPNEYQSGNPHFAAAPSSSATTISFVGNYSGSNANYRSGEVIEFEYL 121
           AA+AFRGH AILNFPNEYQ  NP F  +  SS+T  +  GN     AN    EVIEFEYL
Sbjct: 66  AAFAFRGHTAILNFPNEYQYQNPSFPPSSVSSSTYSAGRGNPQRGGAN----EVIEFEYL 125

Query: 122 DNELLEELLQSEGE 136
           D++LLE+LLQ++ +
Sbjct: 126 DDKLLEDLLQTQDD 131

[Close]

BLAST of CmoCh17G013120 vs. TAIR10
Match: AT3G23230.1 (AT3G23230.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 148.3 bits (373), Expect = 3.6e-36
Identity = 77/130 (59.23%), Postives = 98/130 (75.38%), Query Frame = 1


Query: 5   KTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAY 64
           ++ N   +   +AR+RG+RRRPWGKFAAEIRDPSRNGARLWLGTF+TAEEAARAYD+AA+
Sbjct: 6   RSSNNQSQDDKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAF 65

Query: 65  AFRGHLAILNFPNEYQSGNPHFAAAPS-SSATTISFVGNYSGSNANYRSGEVIEFEYLDN 124
             RGHLAILNFPNEY      ++  P  +S+++ S  G+ S + +     EV EFEYLD+
Sbjct: 66  NLRGHLAILNFPNEYYPRMDDYSLRPPYASSSSSSSSGSTSTNVSRQNQREVFEFEYLDD 125

Query: 125 ELLEELLQSE 134
           ++LEELL SE
Sbjct: 126 KVLEELLDSE 135

[Close]

BLAST of CmoCh17G013120 vs. TAIR10
Match: AT3G23220.1 (AT3G23220.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 133.3 bits (334), Expect = 1.2e-31
Identity = 75/135 (55.56%), Postives = 94/135 (69.63%), Query Frame = 1


Query: 13  STNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAI 72
           +TNE +YRG+R+RPWGK+AAEIRD +R+GAR+WLGTF+TAE+AARAYD+AA+  RG  AI
Sbjct: 8   NTNEMKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAI 67

Query: 73  LNFPNEYQ------SGNPHFAAAPSSSATTISFVGNYSGSNANYRSGEVIEFEYLDNELL 132
           LNFP+EYQ      +G+   A A SSS         Y G        EVIEFEYLD+ LL
Sbjct: 68  LNFPHEYQMMKDGPNGSHENAVASSSS--------GYRGGGGGDDGREVIEFEYLDDSLL 127

Query: 133 EELLQSEGEGFDRNN 142
           EELL   GE  +++N
Sbjct: 128 EELL-DYGERSNQDN 133

[Close]

BLAST of CmoCh17G013120 vs. TAIR10
Match: AT5G43410.1 (AT5G43410.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 129.8 bits (325), Expect = 1.3e-30
Identity = 70/119 (58.82%), Postives = 89/119 (74.79%), Query Frame = 1


Query: 18  RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAILNFPN 77
           +YRG+RRRPWGK+AAEIRD  ++G R+WLGTFDTAEEAARAYDQAAY+ RG  AILNFP+
Sbjct: 14  KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFPH 73

Query: 78  EYQSGNPHFAAAPSSSATTISFVGNYSGS-NANYRSGEVIEFEYLDNELLEELLQSEGE 136
           EY  G        S  +++ +  G+ S S +A+  S +V EFEYLD+ +LEELL+ EGE
Sbjct: 74  EYNMG--------SGVSSSTAMAGSSSASASASSSSRQVFEFEYLDDSVLEELLE-EGE 123

[Close]

BLAST of CmoCh17G013120 vs. TAIR10
Match: AT1G04370.1 (AT1G04370.1 Ethylene-responsive element binding factor 14)

HSP 1 Score: 126.7 bits (317), Expect = 1.1e-29
Identity = 68/139 (48.92%), Postives = 95/139 (68.35%), Query Frame = 1


Query: 3   GKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQA 62
           G+ +G+GG     + +YRG+RRRPWGK+AAEIRD  ++G R+WLGTFDTAE+AARAYD+A
Sbjct: 5   GRSSGSGGG-GAEQGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRA 64

Query: 63  AYAFRGHLAILNFPNEYQSGNPHFAAAPSSSATTISFVGNYSGSNANYRSGEVIEFEYLD 122
           AY+ RG  AILNFP+EY  G    + A +SS++                S +V EFEYLD
Sbjct: 65  AYSMRGKAAILNFPHEYNMGTGSSSTAANSSSS----------------SQQVFEFEYLD 124

Query: 123 NELLEELLQSEGEGFDRNN 142
           + +L+ELL+  GE +++ +
Sbjct: 125 DSVLDELLE-YGENYNKTH 125

[Close]

BLAST of CmoCh17G013120 vs. TAIR10
Match: AT5G47220.1 (AT5G47220.1 ethylene responsive element binding factor 2)

HSP 1 Score: 102.4 bits (254), Expect = 2.3e-22
Identity = 60/127 (47.24%), Postives = 79/127 (62.20%), Query Frame = 1


Query: 19  YRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAILNFPNE 78
           YRG+R+RPWGKFAAEIRDP++NGAR+WLGTF+TAE+AA AYD AA+  RG  A+LNFP  
Sbjct: 117 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNFPLR 176

Query: 79  YQSGNP---HFAAAPSSSATTISFVGNYSGSNANYR--------SGEVIEF--EYLDNEL 133
             SG P      +  SSS+++ S     S  N   +        + EV++   E  D   
Sbjct: 177 VNSGEPDPVRITSKRSSSSSSSSSSSTSSSENGKLKRRRKAENLTSEVVQVKCEVGDETR 236

[Close]

BLAST of CmoCh17G013120 vs. NCBI nr
Match: gi|778727429|ref|XP_011659259.1| (PREDICTED: ethylene-responsive transcription factor ERF098-like [Cucumis sativus])

HSP 1 Score: 244.2 bits (622), Expect = 1.4e-61
Identity = 126/148 (85.14%), Postives = 134/148 (90.54%), Query Frame = 1


Query: 1   MEGKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60
           MEGK+TGN GKRSTNE+RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD
Sbjct: 1   MEGKRTGNEGKRSTNESRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60

Query: 61  QAAYAFRGHLAILNFPNEYQSGNPHF-------AAAPSSSATTISFVGNYSGSNANYRSG 120
           QAAYAFRGHLAILNFPNEYQSGNP+F       AA+ SSS TTISF GNYSG+NA+  SG
Sbjct: 61  QAAYAFRGHLAILNFPNEYQSGNPNFGAGYGSSAASGSSSTTTISFGGNYSGNNASRGSG 120

Query: 121 EVIEFEYLDNELLEELLQSEGEGFDRNN 142
           EVIEFEYLDNELLEELLQSEGEG++R N
Sbjct: 121 EVIEFEYLDNELLEELLQSEGEGYNRKN 148

[Close]

BLAST of CmoCh17G013120 vs. NCBI nr
Match: gi|659100764|ref|XP_008451255.1| (PREDICTED: ethylene-responsive transcription factor ERF098-like [Cucumis melo])

HSP 1 Score: 243.0 bits (619), Expect = 3.0e-61
Identity = 126/148 (85.14%), Postives = 132/148 (89.19%), Query Frame = 1


Query: 1   MEGKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60
           MEGK+TGN GKRSTNE+RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD
Sbjct: 65  MEGKRTGNEGKRSTNESRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 124

Query: 61  QAAYAFRGHLAILNFPNEYQSGNPHF-------AAAPSSSATTISFVGNYSGSNANYRSG 120
           QAAYAFRGHLAILNFPNEYQSGNP+F       AA  SSS TTISF GNYSG+NA   SG
Sbjct: 125 QAAYAFRGHLAILNFPNEYQSGNPNFGAGYGSSAAPGSSSTTTISFGGNYSGNNARRGSG 184

Query: 121 EVIEFEYLDNELLEELLQSEGEGFDRNN 142
           EVIEFEYLDNELLEELLQSEGEG++R N
Sbjct: 185 EVIEFEYLDNELLEELLQSEGEGYNRKN 212

[Close]

BLAST of CmoCh17G013120 vs. NCBI nr
Match: gi|359480011|ref|XP_002264390.2| (PREDICTED: ethylene-responsive transcription factor ERF098-like [Vitis vinifera])

HSP 1 Score: 169.9 bits (429), Expect = 3.3e-39
Identity = 92/147 (62.59%), Postives = 107/147 (72.79%), Query Frame = 1


Query: 1   MEGKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60
           MEG      G+    E RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD
Sbjct: 1   MEGGGRRREGEDKAREVRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60

Query: 61  QAAYAFRGHLAILNFPNEYQSGNPHFAAAPSSSATTISFVGNYSGSNANY---------- 120
           +AAYAFRGHLAILNFPNE+Q  NP +    SSS+++   +G+ S S+A            
Sbjct: 61  RAAYAFRGHLAILNFPNEHQYQNPGYGQTFSSSSSSSYSLGSSSSSSAGRSTGSGASISS 120

Query: 121 --RSGEVIEFEYLDNELLEELLQSEGE 136
             + G+VIEFEYLDN LLEELL+ +G+
Sbjct: 121 RDQEGQVIEFEYLDNNLLEELLEPQGD 147

[Close]

BLAST of CmoCh17G013120 vs. NCBI nr
Match: gi|147806362|emb|CAN69802.1| (hypothetical protein VITISV_001296 [Vitis vinifera])

HSP 1 Score: 167.9 bits (424), Expect = 1.2e-38
Identity = 91/147 (61.90%), Postives = 106/147 (72.11%), Query Frame = 1


Query: 1   MEGKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60
           MEG      G+    E RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD
Sbjct: 1   MEGGGRRRXGEDKAREVRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60

Query: 61  QAAYAFRGHLAILNFPNEYQSGNPHFAAAPSSSATTISFVGNYSGSNANY---------- 120
           +AAYAFRGHLAILNFPNE+Q  NP +    SSS+++   +G+ S S+A            
Sbjct: 61  RAAYAFRGHLAILNFPNEHQYQNPGYGQTFSSSSSSSYSLGSSSSSSAGRSTGSGASISS 120

Query: 121 --RSGEVIEFEYLDNELLEELLQSEGE 136
             + G+VIEFEYLDN LLEELL+ + +
Sbjct: 121 RDQEGQVIEFEYLDNNLLEELLEPQAQ 147

[Close]

BLAST of CmoCh17G013120 vs. NCBI nr
Match: gi|590715937|ref|XP_007050315.1| (Integrase-type DNA-binding superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 167.9 bits (424), Expect = 1.2e-38
Identity = 90/133 (67.67%), Postives = 106/133 (79.70%), Query Frame = 1


Query: 3   GKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQA 62
           GK TGN GK +  E RYRGIRRRPWGKFAAEIRDP+RNGARLWLGTF+TAEEAARAYD+A
Sbjct: 8   GKNTGNNGKGNA-EVRYRGIRRRPWGKFAAEIRDPTRNGARLWLGTFETAEEAARAYDRA 67

Query: 63  AYAFRGHLAILNFPNEYQSGNPHFAAAPSSSATTISFVGNYSGSNANYRSGEVIEFEYLD 122
           A+AFRGH AILNFPNEYQS NP F  + +SS+T     G   G+    R  EVIEFEYLD
Sbjct: 68  AFAFRGHSAILNFPNEYQSHNPIFPPSLASSST----YGVGRGNPPRGRGSEVIEFEYLD 127

Query: 123 NELLEELLQSEGE 136
           ++LLE+LL+++ +
Sbjct: 128 DKLLEDLLETQDD 135

The following BLAST results are available for this feature:

BLAST of CmoCh17G013120 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERF98_ARATH	6.4e-35	59.23	Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana GN=ERF09...	[more]
ERF95_ARATH	2.1e-30	55.56	Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana GN=ERF09...	[more]
ERF96_ARATH	2.3e-29	58.82	Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana GN=ERF09...	[more]
ERF97_ARATH	2.0e-28	48.92	Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana GN=ERF14 PE=...	[more]
EF101_ARATH	4.0e-21	47.24	Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana GN=ERF2 PE=2 ...	[more]

BLAST of CmoCh17G013120 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAA6_CUCSA	9.5e-62	85.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375830 PE=4 SV=1	[more]
F6HZI9_VITVI	2.3e-39	62.59	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g03220 PE=4 SV=...	[more]
A0A061DPX1_THECC	8.7e-39	67.67	Integrase-type DNA-binding superfamily protein, putative OS=Theobroma cacao GN=T...	[more]
A5B7V7_VITVI	8.7e-39	61.90	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001296 PE=4 SV=1	[more]
A0A0D2NAN9_GOSRA	4.3e-38	66.42	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G176700 PE=4 SV=1	[more]

BLAST of CmoCh17G013120 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G23230.1	3.6e-36	59.23	Integrase-type DNA-binding superfamily protein	[more]
AT3G23220.1	1.2e-31	55.56	Integrase-type DNA-binding superfamily protein	[more]
AT5G43410.1	1.3e-30	58.82	Integrase-type DNA-binding superfamily protein	[more]
AT1G04370.1	1.1e-29	48.92	Ethylene-responsive element binding factor 14	[more]
AT5G47220.1	2.3e-22	47.24	ethylene responsive element binding factor 2	[more]

BLAST of CmoCh17G013120 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778727429\|ref\|XP_011659259.1\|	1.4e-61	85.14	PREDICTED: ethylene-responsive transcription factor ERF098-like [Cucumis sativus...	[more]
gi\|659100764\|ref\|XP_008451255.1\|	3.0e-61	85.14	PREDICTED: ethylene-responsive transcription factor ERF098-like [Cucumis melo]	[more]
gi\|359480011\|ref\|XP_002264390.2\|	3.3e-39	62.59	PREDICTED: ethylene-responsive transcription factor ERF098-like [Vitis vinifera]	[more]
gi\|147806362\|emb\|CAN69802.1\|	1.2e-38	61.90	hypothetical protein VITISV_001296 [Vitis vinifera]	[more]
gi\|590715937\|ref\|XP_007050315.1\|	1.2e-38	67.67	Integrase-type DNA-binding superfamily protein, putative [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G013120.1	CmoCh17G013120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 19..30 score: 1.2E-11coord: 42..58 score: 1.2
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 18..78 score: 1.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 18..69 score: 1.6
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 18..82 score: 3.0
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 18..76 score: 25
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 18..77 score: 1.77
None	No IPR available	PANTHER	PTHR31190	FAMILY NOT NAMED	coord: 16..138 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh17G013120	Cucsa.388540	Cucumber (Gy14) v1	cgycmoB1076
CmoCh17G013120	CmaCh17G013510	Cucurbita maxima (Rimu)	cmacmoB353
CmoCh17G013120	CmaCh08G002950	Cucurbita maxima (Rimu)	cmacmoB888
CmoCh17G013120	Cla014830	Watermelon (97103) v1	cmowmB325
CmoCh17G013120	Csa7G375830	Cucumber (Chinese Long) v2	cmocuB374
CmoCh17G013120	MELO3C015739	Melon (DHL92) v3.5.1	cmomeB315
CmoCh17G013120	ClCG09G007760	Watermelon (Charleston Gray)	cmowcgB302
CmoCh17G013120	CSPI07G15620	Wild cucumber (PI 183967)	cmocpiB377
CmoCh17G013120	Lsi02G022160	Bottle gourd (USVL1VR-Ls)	cmolsiB334
CmoCh17G013120	MELO3C015739.2	Melon (DHL92) v3.6.1	cmomedB360
CmoCh17G013120	Cla97C09G170370	Watermelon (97103) v2	cmowmbB373
CmoCh17G013120	CsGy7G014130	Cucumber (Gy14) v2	cgybcmoB903
CmoCh17G013120	Carg11524	Silver-seed gourd	carcmoB0021

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh17G013120	CmoCh08G002930	Cucurbita moschata (Rifu)	cmocmoB311

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh17G013120	Cucumber (Chinese Long) v3	cmocucB0450
CmoCh17G013120	Wax gourd	cmowgoB0492
CmoCh17G013120	Cucurbita pepo (Zucchini)	cmocpeB335