CmoCh08G002930 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh08G002930
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ethylene-responsive transcription factor
Location	Cmo_Chr08 : 1804891 .. 1805331 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGAAAAAGATCCACAAACGAACGAAAGAAATCGCCAAACGAAGCTCGTTACCGAGGGATACGGCGGCGGCCATGGGGGAAATTTGCGGCGGAGATTCGAGATCCGTCGAGGAATGGCGCTCGGCTCTGGCTAGGAACGTTCGACACGGCGGAGGAAGCAGCGAGGGCGTACGATCAAGCGGCGTATGCGTTCAGAGGGCATTTAGCGATTCTCAATTTCCCGAATGAGTACCAAAGTGGGAACCCTAATTCTGAGGCGGCGTTTGGTGGTTCTACGGCGGCGCCGTCTTCTTCGACGGCGTTTTCTGGAAATTACTCCGGCAGCAATGGGAGCCATGGATCCAACGAAGTGATTGAGTTGGAGTATTTGGATAATGAGGTTTTGGAAGAGCTTTTGCAATCGGAAGATGAAGGATTCAATCGGAAGAACCGATGA

mRNA sequence

ATGGAAGGAAAAAGATCCACAAACGAACGAAAGAAATCGCCAAACGAAGCTCGTTACCGAGGGATACGGCGGCGGCCATGGGGGAAATTTGCGGCGGAGATTCGAGATCCGTCGAGGAATGGCGCTCGGCTCTGGCTAGGAACGTTCGACACGGCGGAGGAAGCAGCGAGGGCGTACGATCAAGCGGCGTATGCGTTCAGAGGGCATTTAGCGATTCTCAATTTCCCGAATGAGTACCAAAGTGGGAACCCTAATTCTGAGGCGGCGTTTGGTGGTTCTACGGCGGCGCCGTCTTCTTCGACGGCGTTTTCTGGAAATTACTCCGGCAGCAATGGGAGCCATGGATCCAACGAAGTGATTGAGTTGGAGTATTTGGATAATGAGGTTTTGGAAGAGCTTTTGCAATCGGAAGATGAAGGATTCAATCGGAAGAACCGATGA

Coding sequence (CDS)

ATGGAAGGAAAAAGATCCACAAACGAACGAAAGAAATCGCCAAACGAAGCTCGTTACCGAGGGATACGGCGGCGGCCATGGGGGAAATTTGCGGCGGAGATTCGAGATCCGTCGAGGAATGGCGCTCGGCTCTGGCTAGGAACGTTCGACACGGCGGAGGAAGCAGCGAGGGCGTACGATCAAGCGGCGTATGCGTTCAGAGGGCATTTAGCGATTCTCAATTTCCCGAATGAGTACCAAAGTGGGAACCCTAATTCTGAGGCGGCGTTTGGTGGTTCTACGGCGGCGCCGTCTTCTTCGACGGCGTTTTCTGGAAATTACTCCGGCAGCAATGGGAGCCATGGATCCAACGAAGTGATTGAGTTGGAGTATTTGGATAATGAGGTTTTGGAAGAGCTTTTGCAATCGGAAGATGAAGGATTCAATCGGAAGAACCGATGA

Homology

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BLAST of CmoCh08G002930 vs. Swiss-Prot
Match: ERF98_ARATH (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana GN=ERF098 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 8.6e-35
Identity = 82/134 (61.19%), Postives = 99/134 (73.88%), Query Frame = 1


Query: 5   RSTNERKKSPNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAY 64
           RS+N + +   +AR+RG+RRRPWGKFAAEIRDPSRNGARLWLGTF+TAEEAARAYD+AA+
Sbjct: 6   RSSNNQSQDDKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAF 65

Query: 65  AFRGHLAILNFPNEYQSGNPNSEAAFGGSTAAPSSSTAFSGNYSGSNGSHGSNEVIELEY 124
             RGHLAILNFPNEY    P  +        A SSS++ SG+ S +       EV E EY
Sbjct: 66  NLRGHLAILNFPNEYY---PRMDDYSLRPPYASSSSSSSSGSTSTNVSRQNQREVFEFEY 125

Query: 125 LDNEVLEELLQSED 139
           LD++VLEELL SE+
Sbjct: 126 LDDKVLEELLDSEE 136

[Close]

BLAST of CmoCh08G002930 vs. Swiss-Prot
Match: ERF96_ARATH (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana GN=ERF096 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.2e-29
Identity = 71/123 (57.72%), Postives = 88/123 (71.54%), Query Frame = 1


Query: 18  RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAILNFPN 77
           +YRG+RRRPWGK+AAEIRD  ++G R+WLGTFDTAEEAARAYDQAAY+ RG  AILNFP+
Sbjct: 14  KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFPH 73

Query: 78  EYQSGNPNSEAAFGGSTAAPSSSTAFSGNYSGS-NGSHGSNEVIELEYLDNEVLEELLQS 137
           EY  G            +  SSSTA +G+ S S + S  S +V E EYLD+ VLEELL+ 
Sbjct: 74  EYNMG------------SGVSSSTAMAGSSSASASASSSSRQVFEFEYLDDSVLEELLEE 124

Query: 138 EDE 140
            ++
Sbjct: 134 GEK 124

[Close]

BLAST of CmoCh08G002930 vs. Swiss-Prot
Match: ERF95_ARATH (Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana GN=ERF095 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 5.4e-29
Identity = 71/136 (52.21%), Postives = 90/136 (66.18%), Query Frame = 1


Query: 15  NEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAILN 74
           NE +YRG+R+RPWGK+AAEIRD +R+GAR+WLGTF+TAE+AARAYD+AA+  RG  AILN
Sbjct: 10  NEMKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILN 69

Query: 75  FPNEYQSGNPNSEAAFGGSTAAPSSSTAFSGNYSGSNGSHGSNEVIELEYLDNEVLEELL 134
           FP+EYQ        +   + A+ SS       Y G  G     EVIE EYLD+ +LEELL
Sbjct: 70  FPHEYQMMKDGPNGSHENAVASSSS------GYRGGGGGDDGREVIEFEYLDDSLLEELL 129

Query: 135 ----QSEDEGFNRKNR 147
               +S  +  N  NR
Sbjct: 130 DYGERSNQDNCNDANR 139

[Close]

BLAST of CmoCh08G002930 vs. Swiss-Prot
Match: ERF97_ARATH (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana GN=ERF14 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.0e-27
Identity = 72/142 (50.70%), Postives = 93/142 (65.49%), Query Frame = 1


Query: 2   EGKRSTNERKKSPNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQ 61
           +G RS+        + +YRG+RRRPWGK+AAEIRD  ++G R+WLGTFDTAE+AARAYD+
Sbjct: 3   QGGRSSGSGGGGAEQGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDR 62

Query: 62  AAYAFRGHLAILNFPNEYQSGNPNSEAAFGGSTAAPSSSTAFSGNYSGSNGSHGSNEVIE 121
           AAY+ RG  AILNFP+EY  G  +S      STAA SSS+              S +V E
Sbjct: 63  AAYSMRGKAAILNFPHEYNMGTGSS------STAANSSSS--------------SQQVFE 122

Query: 122 LEYLDNEVLEELLQSEDEGFNR 144
            EYLD+ VL+ELL+   E +N+
Sbjct: 123 FEYLDDSVLDELLE-YGENYNK 123

[Close]

BLAST of CmoCh08G002930 vs. Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2)

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-21
Identity = 46/67 (68.66%), Postives = 57/67 (85.07%), Query Frame = 1


Query: 19  YRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAILNFPNE 78
           YRG+R+RPWGKFAAEIRDP++NGAR+WLGTF+TAE+AA AYD+AA+  RG  A+LNFP  
Sbjct: 148 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLR 207

Query: 79  YQSGNPN 86
             SG P+
Sbjct: 208 VNSGEPD 214

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BLAST of CmoCh08G002930 vs. TrEMBL
Match: A0A0A0KAA6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375830 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 8.6e-58
Identity = 121/148 (81.76%), Postives = 130/148 (87.84%), Query Frame = 1


Query: 1   MEGKRSTNERKKSPNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60
           MEGKR+ NE K+S NE+RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD
Sbjct: 1   MEGKRTGNEGKRSTNESRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60

Query: 61  QAAYAFRGHLAILNFPNEYQSGNPNSEAAFGGSTAAPSSST---AFSGNYSGSNGSHGSN 120
           QAAYAFRGHLAILNFPNEYQSGNPN  A +G S A+ SSST   +F GNYSG+N S GS 
Sbjct: 61  QAAYAFRGHLAILNFPNEYQSGNPNFGAGYGSSAASGSSSTTTISFGGNYSGNNASRGSG 120

Query: 121 EVIELEYLDNEVLEELLQSEDEGFNRKN 146
           EVIE EYLDNE+LEELLQSE EG+NRKN
Sbjct: 121 EVIEFEYLDNELLEELLQSEGEGYNRKN 148

[Close]

BLAST of CmoCh08G002930 vs. TrEMBL
Match: B9H8L0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s24450g PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 8.4e-37
Identity = 87/137 (63.50%), Postives = 106/137 (77.37%), Query Frame = 1


Query: 2   EGKRSTNERKKSPNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQ 61
           +G+++T +++K   E  YRGIRRRPWGKFAAEIRDP++NGAR WLGT+DTAEEAARAYD+
Sbjct: 5   QGEKNTKKQEKGRGENAYRGIRRRPWGKFAAEIRDPTKNGARRWLGTYDTAEEAARAYDR 64

Query: 62  AAYAFRGHLAILNFPNEYQSGNPNSEAAFGGSTAAPSSSTAFSGNYSGSNGSHGSNEVIE 121
           AA+AFRGHLAILNFPNEYQ  +P+S  +F  S+   S STA   NY     S G  EVIE
Sbjct: 65  AAFAFRGHLAILNFPNEYQHQDPSSAMSFASSS---SFSTANPVNYGHEVSSTGGQEVIE 124

Query: 122 LEYLDNEVLEELLQSED 139
            EYLDN++LEELL + D
Sbjct: 125 FEYLDNKLLEELLGTND 138

[Close]

BLAST of CmoCh08G002930 vs. TrEMBL
Match: F6HZI9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g03220 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.2e-36
Identity = 95/153 (62.09%), Postives = 108/153 (70.59%), Query Frame = 1


Query: 1   MEGKRSTNERKKSPNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60
           MEG     E +    E RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD
Sbjct: 1   MEGGGRRREGEDKAREVRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60

Query: 61  QAAYAFRGHLAILNFPNEYQSGNPNSEAAFGGSTAAP----SSSTAFSGNYSGSNGSHGS 120
           +AAYAFRGHLAILNFPNE+Q  NP     F  S+++     SSS++ +G  +GS  S  S
Sbjct: 61  RAAYAFRGHLAILNFPNEHQYQNPGYGQTFSSSSSSSYSLGSSSSSSAGRSTGSGASISS 120

Query: 121 ----NEVIELEYLDNEVLEELLQSEDEGFNRKN 146
                +VIE EYLDN +LEELL  E +G  R N
Sbjct: 121 RDQEGQVIEFEYLDNNLLEELL--EPQGDRRGN 151

[Close]

BLAST of CmoCh08G002930 vs. TrEMBL
Match: M5VTS0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020642mg PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.2e-36
Identity = 92/146 (63.01%), Postives = 110/146 (75.34%), Query Frame = 1


Query: 1   MEGKRSTNERK---KSPNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAAR 60
           MEGK   N++K   K  ++ RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTF+TAEEAAR
Sbjct: 1   MEGKGVENQQKEQTKVRDQTRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAAR 60

Query: 61  AYDQAAYAFRGHLAILNFPNEYQSGNPNSEAAFGGSTAAPSSSTAFSGNYSGSNGSHG-- 120
           AYD+AA+ FRGHLAILNFPN+YQ  NP+S      ST++ SSS+ FS    G + + G  
Sbjct: 61  AYDRAAFGFRGHLAILNFPNDYQYHNPSSSLI---STSSSSSSSPFSAADIGKSTNFGRG 120

Query: 121 --SNEVIELEYLDNEVLEELLQSEDE 140
               EVIE EYLDN VLEELL ++++
Sbjct: 121 QEEEEVIEFEYLDNMVLEELLDTKED 143

[Close]

BLAST of CmoCh08G002930 vs. TrEMBL
Match: A0A067JUN2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17701 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 5.4e-36
Identity = 85/139 (61.15%), Postives = 109/139 (78.42%), Query Frame = 1


Query: 5   RSTNERKKSPNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAY 64
           +++ ++ +   E RYRGIRRRPWGKFAAEIRDP+RNGAR WLGTF+TAEEAARAYD+AA+
Sbjct: 11  KNSKKQDRGSAETRYRGIRRRPWGKFAAEIRDPTRNGARRWLGTFETAEEAARAYDRAAF 70

Query: 65  AFRGHLAILNFPNEYQSGNPNSEAAFGGSTAAPSSSTAFSGNYSGSNGSHGSNEVIELEY 124
           AFRGHLAILNFPNEYQ  + +S      S+++ SSS+A   NY G  GS G  EVIE EY
Sbjct: 71  AFRGHLAILNFPNEYQYNSHSSPLPSFASSSSSSSSSAPPANY-GVVGSSGGQEVIEFEY 130

Query: 125 LDNEVLEELLQSEDEGFNR 144
           LDN++LE+LL++++   N+
Sbjct: 131 LDNKLLEDLLETKEVSNNK 148

[Close]

BLAST of CmoCh08G002930 vs. TAIR10
Match: AT3G23230.1 (AT3G23230.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 147.9 bits (372), Expect = 4.9e-36
Identity = 82/134 (61.19%), Postives = 99/134 (73.88%), Query Frame = 1


Query: 5   RSTNERKKSPNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAY 64
           RS+N + +   +AR+RG+RRRPWGKFAAEIRDPSRNGARLWLGTF+TAEEAARAYD+AA+
Sbjct: 6   RSSNNQSQDDKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAF 65

Query: 65  AFRGHLAILNFPNEYQSGNPNSEAAFGGSTAAPSSSTAFSGNYSGSNGSHGSNEVIELEY 124
             RGHLAILNFPNEY    P  +        A SSS++ SG+ S +       EV E EY
Sbjct: 66  NLRGHLAILNFPNEYY---PRMDDYSLRPPYASSSSSSSSGSTSTNVSRQNQREVFEFEY 125

Query: 125 LDNEVLEELLQSED 139
           LD++VLEELL SE+
Sbjct: 126 LDDKVLEELLDSEE 136

[Close]

BLAST of CmoCh08G002930 vs. TAIR10
Match: AT5G43410.1 (AT5G43410.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 129.4 bits (324), Expect = 1.8e-30
Identity = 71/123 (57.72%), Postives = 88/123 (71.54%), Query Frame = 1


Query: 18  RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAILNFPN 77
           +YRG+RRRPWGK+AAEIRD  ++G R+WLGTFDTAEEAARAYDQAAY+ RG  AILNFP+
Sbjct: 14  KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFPH 73

Query: 78  EYQSGNPNSEAAFGGSTAAPSSSTAFSGNYSGS-NGSHGSNEVIELEYLDNEVLEELLQS 137
           EY  G            +  SSSTA +G+ S S + S  S +V E EYLD+ VLEELL+ 
Sbjct: 74  EYNMG------------SGVSSSTAMAGSSSASASASSSSRQVFEFEYLDDSVLEELLEE 124

Query: 138 EDE 140
            ++
Sbjct: 134 GEK 124

[Close]

BLAST of CmoCh08G002930 vs. TAIR10
Match: AT3G23220.1 (AT3G23220.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 128.6 bits (322), Expect = 3.1e-30
Identity = 71/136 (52.21%), Postives = 90/136 (66.18%), Query Frame = 1


Query: 15  NEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAILN 74
           NE +YRG+R+RPWGK+AAEIRD +R+GAR+WLGTF+TAE+AARAYD+AA+  RG  AILN
Sbjct: 10  NEMKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILN 69

Query: 75  FPNEYQSGNPNSEAAFGGSTAAPSSSTAFSGNYSGSNGSHGSNEVIELEYLDNEVLEELL 134
           FP+EYQ        +   + A+ SS       Y G  G     EVIE EYLD+ +LEELL
Sbjct: 70  FPHEYQMMKDGPNGSHENAVASSSS------GYRGGGGGDDGREVIEFEYLDDSLLEELL 129

Query: 135 ----QSEDEGFNRKNR 147
               +S  +  N  NR
Sbjct: 130 DYGERSNQDNCNDANR 139

[Close]

BLAST of CmoCh08G002930 vs. TAIR10
Match: AT1G04370.1 (AT1G04370.1 Ethylene-responsive element binding factor 14)

HSP 1 Score: 122.9 bits (307), Expect = 1.7e-28
Identity = 72/142 (50.70%), Postives = 93/142 (65.49%), Query Frame = 1


Query: 2   EGKRSTNERKKSPNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQ 61
           +G RS+        + +YRG+RRRPWGK+AAEIRD  ++G R+WLGTFDTAE+AARAYD+
Sbjct: 3   QGGRSSGSGGGGAEQGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDR 62

Query: 62  AAYAFRGHLAILNFPNEYQSGNPNSEAAFGGSTAAPSSSTAFSGNYSGSNGSHGSNEVIE 121
           AAY+ RG  AILNFP+EY  G  +S      STAA SSS+              S +V E
Sbjct: 63  AAYSMRGKAAILNFPHEYNMGTGSS------STAANSSSS--------------SQQVFE 122

Query: 122 LEYLDNEVLEELLQSEDEGFNR 144
            EYLD+ VL+ELL+   E +N+
Sbjct: 123 FEYLDDSVLDELLE-YGENYNK 123

[Close]

BLAST of CmoCh08G002930 vs. TAIR10
Match: AT4G17500.1 (AT4G17500.1 ethylene responsive element binding factor 1)

HSP 1 Score: 104.0 bits (258), Expect = 8.1e-23
Identity = 46/67 (68.66%), Postives = 57/67 (85.07%), Query Frame = 1


Query: 19  YRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAILNFPNE 78
           YRG+R+RPWGKFAAEIRDP++NGAR+WLGTF+TAE+AA AYD+AA+  RG  A+LNFP  
Sbjct: 148 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLR 207

Query: 79  YQSGNPN 86
             SG P+
Sbjct: 208 VNSGEPD 214

[Close]

BLAST of CmoCh08G002930 vs. NCBI nr
Match: gi|778727429|ref|XP_011659259.1| (PREDICTED: ethylene-responsive transcription factor ERF098-like [Cucumis sativus])

HSP 1 Score: 231.1 bits (588), Expect = 1.2e-57
Identity = 121/148 (81.76%), Postives = 130/148 (87.84%), Query Frame = 1


Query: 1   MEGKRSTNERKKSPNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60
           MEGKR+ NE K+S NE+RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD
Sbjct: 1   MEGKRTGNEGKRSTNESRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60

Query: 61  QAAYAFRGHLAILNFPNEYQSGNPNSEAAFGGSTAAPSSST---AFSGNYSGSNGSHGSN 120
           QAAYAFRGHLAILNFPNEYQSGNPN  A +G S A+ SSST   +F GNYSG+N S GS 
Sbjct: 61  QAAYAFRGHLAILNFPNEYQSGNPNFGAGYGSSAASGSSSTTTISFGGNYSGNNASRGSG 120

Query: 121 EVIELEYLDNEVLEELLQSEDEGFNRKN 146
           EVIE EYLDNE+LEELLQSE EG+NRKN
Sbjct: 121 EVIEFEYLDNELLEELLQSEGEGYNRKN 148

[Close]

BLAST of CmoCh08G002930 vs. NCBI nr
Match: gi|659100764|ref|XP_008451255.1| (PREDICTED: ethylene-responsive transcription factor ERF098-like [Cucumis melo])

HSP 1 Score: 228.4 bits (581), Expect = 8.0e-57
Identity = 120/148 (81.08%), Postives = 128/148 (86.49%), Query Frame = 1


Query: 1   MEGKRSTNERKKSPNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60
           MEGKR+ NE K+S NE+RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD
Sbjct: 65  MEGKRTGNEGKRSTNESRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 124

Query: 61  QAAYAFRGHLAILNFPNEYQSGNPNSEAAFGGSTAAPSSST---AFSGNYSGSNGSHGSN 120
           QAAYAFRGHLAILNFPNEYQSGNPN  A +G S A  SSST   +F GNYSG+N   GS 
Sbjct: 125 QAAYAFRGHLAILNFPNEYQSGNPNFGAGYGSSAAPGSSSTTTISFGGNYSGNNARRGSG 184

Query: 121 EVIELEYLDNEVLEELLQSEDEGFNRKN 146
           EVIE EYLDNE+LEELLQSE EG+NRKN
Sbjct: 185 EVIEFEYLDNELLEELLQSEGEGYNRKN 212

[Close]

BLAST of CmoCh08G002930 vs. NCBI nr
Match: gi|224085625|ref|XP_002307640.1| (hypothetical protein POPTR_0005s24450g [Populus trichocarpa])

HSP 1 Score: 161.4 bits (407), Expect = 1.2e-36
Identity = 87/137 (63.50%), Postives = 106/137 (77.37%), Query Frame = 1


Query: 2   EGKRSTNERKKSPNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQ 61
           +G+++T +++K   E  YRGIRRRPWGKFAAEIRDP++NGAR WLGT+DTAEEAARAYD+
Sbjct: 5   QGEKNTKKQEKGRGENAYRGIRRRPWGKFAAEIRDPTKNGARRWLGTYDTAEEAARAYDR 64

Query: 62  AAYAFRGHLAILNFPNEYQSGNPNSEAAFGGSTAAPSSSTAFSGNYSGSNGSHGSNEVIE 121
           AA+AFRGHLAILNFPNEYQ  +P+S  +F  S+   S STA   NY     S G  EVIE
Sbjct: 65  AAFAFRGHLAILNFPNEYQHQDPSSAMSFASSS---SFSTANPVNYGHEVSSTGGQEVIE 124

Query: 122 LEYLDNEVLEELLQSED 139
            EYLDN++LEELL + D
Sbjct: 125 FEYLDNKLLEELLGTND 138

[Close]

BLAST of CmoCh08G002930 vs. NCBI nr
Match: gi|645260138|ref|XP_008235691.1| (PREDICTED: ethylene-responsive transcription factor ERF098-like [Prunus mume])

HSP 1 Score: 160.6 bits (405), Expect = 2.1e-36
Identity = 92/146 (63.01%), Postives = 112/146 (76.71%), Query Frame = 1


Query: 1   MEGKRSTNERK---KSPNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAAR 60
           MEGKR  N++K   K  ++ RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTF+TAEEAAR
Sbjct: 21  MEGKRVENQQKEQTKVRDQTRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAAR 80

Query: 61  AYDQAAYAFRGHLAILNFPNEYQSGNPNSE-AAFGGSTAAPSSSTAFSGNYSGSNGSHG- 120
           AYD+AA+ FRGHLAILNFPN+YQ  NP+S   +   S+++ SSS+ FS    G + + G 
Sbjct: 81  AYDRAAFGFRGHLAILNFPNDYQYHNPSSSLISTSSSSSSSSSSSPFSAADIGKSTNFGR 140

Query: 121 ---SNEVIELEYLDNEVLEELLQSED 139
               +EVIE EYLDN VLEELL +++
Sbjct: 141 GQEEDEVIEFEYLDNMVLEELLDTKE 166

[Close]

BLAST of CmoCh08G002930 vs. NCBI nr
Match: gi|1009147486|ref|XP_015891439.1| (PREDICTED: ethylene-responsive transcription factor ERF098-like [Ziziphus jujuba])

HSP 1 Score: 159.8 bits (403), Expect = 3.5e-36
Identity = 91/140 (65.00%), Postives = 106/140 (75.71%), Query Frame = 1


Query: 1   MEGKRSTNERKKSPNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60
           ME KR  NE+K    EARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD
Sbjct: 1   MEPKRPGNEQKGK--EARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60

Query: 61  QAAYAFRGHLAILNFPNEYQSGNPNSEAAFGGSTAAPSSSTAFSGNYSGSNGSHGSN-EV 120
           +AA+AFRGHLAILNFPNEYQ GN +S         +P+ S++ SG       S     EV
Sbjct: 61  RAAFAFRGHLAILNFPNEYQYGNTSS---------SPAESSSVSGGVGKGGMSRAQEVEV 120

Query: 121 IELEYLDNEVLEELLQSEDE 140
           IE EYLD+++LEELL ++++
Sbjct: 121 IEFEYLDDKLLEELLDTQED 129

The following BLAST results are available for this feature:

BLAST of CmoCh08G002930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERF98_ARATH	8.6e-35	61.19	Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana GN=ERF09...	[more]
ERF96_ARATH	3.2e-29	57.72	Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana GN=ERF09...	[more]
ERF95_ARATH	5.4e-29	52.21	Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana GN=ERF09...	[more]
ERF97_ARATH	3.0e-27	50.70	Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana GN=ERF14 PE=...	[more]
EF100_ARATH	1.4e-21	68.66	Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=...	[more]

BLAST of CmoCh08G002930 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAA6_CUCSA	8.6e-58	81.76	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375830 PE=4 SV=1	[more]
B9H8L0_POPTR	8.4e-37	63.50	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s24450g PE=4 SV=1	[more]
F6HZI9_VITVI	3.2e-36	62.09	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g03220 PE=4 SV=...	[more]
M5VTS0_PRUPE	3.2e-36	63.01	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020642mg PE=4 SV=1	[more]
A0A067JUN2_JATCU	5.4e-36	61.15	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17701 PE=4 SV=1	[more]

BLAST of CmoCh08G002930 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G23230.1	4.9e-36	61.19	Integrase-type DNA-binding superfamily protein	[more]
AT5G43410.1	1.8e-30	57.72	Integrase-type DNA-binding superfamily protein	[more]
AT3G23220.1	3.1e-30	52.21	Integrase-type DNA-binding superfamily protein	[more]
AT1G04370.1	1.7e-28	50.70	Ethylene-responsive element binding factor 14	[more]
AT4G17500.1	8.1e-23	68.66	ethylene responsive element binding factor 1	[more]

BLAST of CmoCh08G002930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778727429\|ref\|XP_011659259.1\|	1.2e-57	81.76	PREDICTED: ethylene-responsive transcription factor ERF098-like [Cucumis sativus...	[more]
gi\|659100764\|ref\|XP_008451255.1\|	8.0e-57	81.08	PREDICTED: ethylene-responsive transcription factor ERF098-like [Cucumis melo]	[more]
gi\|224085625\|ref\|XP_002307640.1\|	1.2e-36	63.50	hypothetical protein POPTR_0005s24450g [Populus trichocarpa]	[more]
gi\|645260138\|ref\|XP_008235691.1\|	2.1e-36	63.01	PREDICTED: ethylene-responsive transcription factor ERF098-like [Prunus mume]	[more]
gi\|1009147486\|ref\|XP_015891439.1\|	3.5e-36	65.00	PREDICTED: ethylene-responsive transcription factor ERF098-like [Ziziphus jujuba...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G002930.1	CmoCh08G002930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 42..58 score: 1.2E-11coord: 19..30 score: 1.2
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 18..78 score: 1.5
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 18..69 score: 1.8
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 18..82 score: 3.0
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 18..76 score: 25
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 18..77 score: 1.9
None	No IPR available	PANTHER	PTHR31190	FAMILY NOT NAMED	coord: 2..140 score: 1.9
None	No IPR available	PANTHER	PTHR31190:SF26	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF096	coord: 2..140 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh08G002930	Cucsa.388540	Cucumber (Gy14) v1	cgycmoB1078
CmoCh08G002930	CmaCh17G013510	Cucurbita maxima (Rimu)	cmacmoB366
CmoCh08G002930	CmaCh08G002950	Cucurbita maxima (Rimu)	cmacmoB913
CmoCh08G002930	Cla014830	Watermelon (97103) v1	cmowmB843
CmoCh08G002930	Csa7G375830	Cucumber (Chinese Long) v2	cmocuB900
CmoCh08G002930	MELO3C015739	Melon (DHL92) v3.5.1	cmomeB809
CmoCh08G002930	ClCG09G007760	Watermelon (Charleston Gray)	cmowcgB785
CmoCh08G002930	CSPI07G15620	Wild cucumber (PI 183967)	cmocpiB913
CmoCh08G002930	Lsi02G022160	Bottle gourd (USVL1VR-Ls)	cmolsiB809
CmoCh08G002930	MELO3C015739.2	Melon (DHL92) v3.6.1	cmomedB912
CmoCh08G002930	Cla97C09G170370	Watermelon (97103) v2	cmowmbB916
CmoCh08G002930	CsGy7G014130	Cucumber (Gy14) v2	cgybcmoB955
CmoCh08G002930	Carg11524	Silver-seed gourd	carcmoB0022

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh08G002930	CmoCh17G013120	Cucurbita moschata (Rifu)	cmocmoB311

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh08G002930	Cucurbita pepo (Zucchini)	cmocpeB853
CmoCh08G002930	Silver-seed gourd	carcmoB1290
CmoCh08G002930	Cucumber (Chinese Long) v3	cmocucB1066
CmoCh08G002930	Cucumber (Chinese Long) v3	cmocucB1075
CmoCh08G002930	Wax gourd	cmowgoB1128
CmoCh08G002930	Wax gourd	cmowgoB1131