CmaCh17G013510 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G013510
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Ethylene-responsive transcription factor, putative
Location	Cma_Chr17 : 9039745 .. 9040170 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGAAAGAAAACAGGAAATGGAGGGAAGAGGTCGACAAACGAAGCTCGTTACCGAGGGATACGGCGGCGTCCATGGGGGAAATTTGCGGCGGAGATTCGTGATCCGTCGAGGAACGGCGCTCGGCTGTGGTTAGGGACGTTCGACACGGCGGAGGAAGCGGCGAGAGCGTACGATCAAGCGGCGTATGCGTTCAGAGGGCATTTGGCGATTCTGAATTTTCCGAATGAGTACCAAAGTGGAAACCCTCATTTCGCGGCGGCGCCTTCTTCATCAGCGACGGCGATCTCTTTCGCCGGAAATTACTCCGGCGGCAATGCGAACTATCGATCGGGGGAAGTGATAGAGTTCGAGTATTTGGATAATGAACTCTTGGAGGAACTTTTGCAGTCGGAAGGAGAAGGATTTGATCGGAGAAATTGA

mRNA sequence

ATGGAAGGAAAGAAAACAGGAAATGGAGGGAAGAGGTCGACAAACGAAGCTCGTTACCGAGGGATACGGCGGCGTCCATGGGGGAAATTTGCGGCGGAGATTCGTGATCCGTCGAGGAACGGCGCTCGGCTGTGGTTAGGGACGTTCGACACGGCGGAGGAAGCGGCGAGAGCGTACGATCAAGCGGCGTATGCGTTCAGAGGGCATTTGGCGATTCTGAATTTTCCGAATGAGTACCAAAGTGGAAACCCTCATTTCGCGGCGGCGCCTTCTTCATCAGCGACGGCGATCTCTTTCGCCGGAAATTACTCCGGCGGCAATGCGAACTATCGATCGGGGGAAGTGATAGAGTTCGAGTATTTGGATAATGAACTCTTGGAGGAACTTTTGCAGTCGGAAGGAGAAGGATTTGATCGGAGAAATTGA

Coding sequence (CDS)

ATGGAAGGAAAGAAAACAGGAAATGGAGGGAAGAGGTCGACAAACGAAGCTCGTTACCGAGGGATACGGCGGCGTCCATGGGGGAAATTTGCGGCGGAGATTCGTGATCCGTCGAGGAACGGCGCTCGGCTGTGGTTAGGGACGTTCGACACGGCGGAGGAAGCGGCGAGAGCGTACGATCAAGCGGCGTATGCGTTCAGAGGGCATTTGGCGATTCTGAATTTTCCGAATGAGTACCAAAGTGGAAACCCTCATTTCGCGGCGGCGCCTTCTTCATCAGCGACGGCGATCTCTTTCGCCGGAAATTACTCCGGCGGCAATGCGAACTATCGATCGGGGGAAGTGATAGAGTTCGAGTATTTGGATAATGAACTCTTGGAGGAACTTTTGCAGTCGGAAGGAGAAGGATTTGATCGGAGAAATTGA

Protein sequence

MEGKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAILNFPNEYQSGNPHFAAAPSSSATAISFAGNYSGGNANYRSGEVIEFEYLDNELLEELLQSEGEGFDRRN

Homology

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BLAST of CmaCh17G013510 vs. Swiss-Prot
Match: ERF98_ARATH (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana GN=ERF098 PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 4.9e-35
Identity = 77/130 (59.23%), Postives = 98/130 (75.38%), Query Frame = 1


Query: 5   KTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAY 64
           ++ N   +   +AR+RG+RRRPWGKFAAEIRDPSRNGARLWLGTF+TAEEAARAYD+AA+
Sbjct: 6   RSSNNQSQDDKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAF 65

Query: 65  AFRGHLAILNFPNEYQSGNPHFAAAPS-SSATAISFAGNYSGGNANYRSGEVIEFEYLDN 124
             RGHLAILNFPNEY      ++  P  +S+++ S +G+ S   +     EV EFEYLD+
Sbjct: 66  NLRGHLAILNFPNEYYPRMDDYSLRPPYASSSSSSSSGSTSTNVSRQNQREVFEFEYLDD 125

Query: 125 ELLEELLQSE 134
           ++LEELL SE
Sbjct: 126 KVLEELLDSE 135

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BLAST of CmaCh17G013510 vs. Swiss-Prot
Match: ERF95_ARATH (Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana GN=ERF095 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.3e-31
Identity = 73/124 (58.87%), Postives = 89/124 (71.77%), Query Frame = 1


Query: 13  STNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAI 72
           +TNE +YRG+R+RPWGK+AAEIRD +R+GAR+WLGTF+TAE+AARAYD+AA+  RG  AI
Sbjct: 8   NTNEMKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAI 67

Query: 73  LNFPNEYQ------SGNPHFAAAPSSSATAISFAGNYSGGNANYRSGEVIEFEYLDNELL 131
           LNFP+EYQ      +G+   A A SSS         Y GG       EVIEFEYLD+ LL
Sbjct: 68  LNFPHEYQMMKDGPNGSHENAVASSSS--------GYRGGGGGDDGREVIEFEYLDDSLL 123

[Close]

BLAST of CmaCh17G013510 vs. Swiss-Prot
Match: ERF96_ARATH (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana GN=ERF096 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.4e-29
Identity = 71/118 (60.17%), Postives = 91/118 (77.12%), Query Frame = 1


Query: 18  RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAILNFPN 77
           +YRG+RRRPWGK+AAEIRD  ++G R+WLGTFDTAEEAARAYDQAAY+ RG  AILNFP+
Sbjct: 14  KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFPH 73

Query: 78  EYQSGNPHFAAAPSSSATAISFAGNYSGGNANYRSGEVIEFEYLDNELLEELLQSEGE 136
           EY  G+        SS+TA++ + + S  +A+  S +V EFEYLD+ +LEELL+ EGE
Sbjct: 74  EYNMGSG------VSSSTAMAGSSSASA-SASSSSRQVFEFEYLDDSVLEELLE-EGE 123

[Close]

BLAST of CmaCh17G013510 vs. Swiss-Prot
Match: ERF97_ARATH (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana GN=ERF14 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-28
Identity = 70/137 (51.09%), Postives = 95/137 (69.34%), Query Frame = 1


Query: 3   GKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQA 62
           G+ +G+GG     + +YRG+RRRPWGK+AAEIRD  ++G R+WLGTFDTAE+AARAYD+A
Sbjct: 5   GRSSGSGGG-GAEQGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRA 64

Query: 63  AYAFRGHLAILNFPNEYQSGNPHFAAAPSSSATAISFAGNYSGGNANYRSGEVIEFEYLD 122
           AY+ RG  AILNFP+EY  G         SS+TA          N++  S +V EFEYLD
Sbjct: 65  AYSMRGKAAILNFPHEYNMGT-------GSSSTA---------ANSSSSSQQVFEFEYLD 123

Query: 123 NELLEELLQSEGEGFDR 140
           + +L+ELL+  GE +++
Sbjct: 125 DSVLDELLE-YGENYNK 123

[Close]

BLAST of CmaCh17G013510 vs. Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2)

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-21
Identity = 46/66 (69.70%), Postives = 56/66 (84.85%), Query Frame = 1


Query: 19  YRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAILNFPNE 78
           YRG+R+RPWGKFAAEIRDP++NGAR+WLGTF+TAE+AA AYD+AA+  RG  A+LNFP  
Sbjct: 148 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLR 207

Query: 79  YQSGNP 85
             SG P
Sbjct: 208 VNSGEP 213

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BLAST of CmaCh17G013510 vs. TrEMBL
Match: A0A0A0KAA6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375830 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.6e-61
Identity = 125/148 (84.46%), Postives = 133/148 (89.86%), Query Frame = 1


Query: 1   MEGKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60
           MEGK+TGN GKRSTNE+RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD
Sbjct: 1   MEGKRTGNEGKRSTNESRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60

Query: 61  QAAYAFRGHLAILNFPNEYQSGNPHF-------AAAPSSSATAISFAGNYSGGNANYRSG 120
           QAAYAFRGHLAILNFPNEYQSGNP+F       AA+ SSS T ISF GNYSG NA+  SG
Sbjct: 61  QAAYAFRGHLAILNFPNEYQSGNPNFGAGYGSSAASGSSSTTTISFGGNYSGNNASRGSG 120

Query: 121 EVIEFEYLDNELLEELLQSEGEGFDRRN 142
           EVIEFEYLDNELLEELLQSEGEG++R+N
Sbjct: 121 EVIEFEYLDNELLEELLQSEGEGYNRKN 148

[Close]

BLAST of CmaCh17G013510 vs. TrEMBL
Match: F6HZI9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g03220 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 5.1e-39
Identity = 94/147 (63.95%), Postives = 107/147 (72.79%), Query Frame = 1


Query: 1   MEGKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60
           MEG      G+    E RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD
Sbjct: 1   MEGGGRRREGEDKAREVRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60

Query: 61  QAAYAFRGHLAILNFPNEYQSGNPHFAAAPSSS--------ATAISFAGNYSGGNANYRS 120
           +AAYAFRGHLAILNFPNE+Q  NP +    SSS        +++ S AG  +G  A+  S
Sbjct: 61  RAAYAFRGHLAILNFPNEHQYQNPGYGQTFSSSSSSSYSLGSSSSSSAGRSTGSGASISS 120

Query: 121 ----GEVIEFEYLDNELLEELLQSEGE 136
               G+VIEFEYLDN LLEELL+ +G+
Sbjct: 121 RDQEGQVIEFEYLDNNLLEELLEPQGD 147

[Close]

BLAST of CmaCh17G013510 vs. TrEMBL
Match: A0A061DPX1_THECC (Integrase-type DNA-binding superfamily protein, putative OS=Theobroma cacao GN=TCM_004061 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 6.6e-39
Identity = 91/133 (68.42%), Postives = 106/133 (79.70%), Query Frame = 1


Query: 3   GKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQA 62
           GK TGN GK +  E RYRGIRRRPWGKFAAEIRDP+RNGARLWLGTF+TAEEAARAYD+A
Sbjct: 8   GKNTGNNGKGNA-EVRYRGIRRRPWGKFAAEIRDPTRNGARLWLGTFETAEEAARAYDRA 67

Query: 63  AYAFRGHLAILNFPNEYQSGNPHFAAAPSSSATAISFAGNYSGGNANYRSGEVIEFEYLD 122
           A+AFRGH AILNFPNEYQS NP F  + +SS+T     GN   G    R  EVIEFEYLD
Sbjct: 68  AFAFRGHSAILNFPNEYQSHNPIFPPSLASSSTYGVGRGNPPRG----RGSEVIEFEYLD 127

Query: 123 NELLEELLQSEGE 136
           ++LLE+LL+++ +
Sbjct: 128 DKLLEDLLETQDD 135

[Close]

BLAST of CmaCh17G013510 vs. TrEMBL
Match: A0A0D2NAN9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G176700 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 8.7e-39
Identity = 90/134 (67.16%), Postives = 104/134 (77.61%), Query Frame = 1


Query: 2   EGKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQ 61
           EGK  GN    +  E RYRGIRRRPWGKFAAEIRDP+RNGARLWLGTF+TAEEAARAYD+
Sbjct: 6   EGKNRGN----NNGEVRYRGIRRRPWGKFAAEIRDPTRNGARLWLGTFETAEEAARAYDR 65

Query: 62  AAYAFRGHLAILNFPNEYQSGNPHFAAAPSSSATAISFAGNYSGGNANYRSGEVIEFEYL 121
           AA+AFRGH AILNFPNEYQ  NP F  +  SS+T  +  GN   G AN    EVIEFEYL
Sbjct: 66  AAFAFRGHTAILNFPNEYQYQNPSFPPSSVSSSTYSAGRGNPQRGGAN----EVIEFEYL 125

Query: 122 DNELLEELLQSEGE 136
           D++LLE+LLQ++ +
Sbjct: 126 DDKLLEDLLQTQDD 131

[Close]

BLAST of CmaCh17G013510 vs. TrEMBL
Match: A5B7V7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001296 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.9e-38
Identity = 93/147 (63.27%), Postives = 106/147 (72.11%), Query Frame = 1


Query: 1   MEGKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60
           MEG      G+    E RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD
Sbjct: 1   MEGGGRRRXGEDKAREVRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60

Query: 61  QAAYAFRGHLAILNFPNEYQSGNPHFAAAPSSS--------ATAISFAGNYSGGNANYRS 120
           +AAYAFRGHLAILNFPNE+Q  NP +    SSS        +++ S AG  +G  A+  S
Sbjct: 61  RAAYAFRGHLAILNFPNEHQYQNPGYGQTFSSSSSSSYSLGSSSSSSAGRSTGSGASISS 120

Query: 121 ----GEVIEFEYLDNELLEELLQSEGE 136
               G+VIEFEYLDN LLEELL+ + +
Sbjct: 121 RDQEGQVIEFEYLDNNLLEELLEPQAQ 147

[Close]

BLAST of CmaCh17G013510 vs. TAIR10
Match: AT3G23230.1 (AT3G23230.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 148.7 bits (374), Expect = 2.8e-36
Identity = 77/130 (59.23%), Postives = 98/130 (75.38%), Query Frame = 1


Query: 5   KTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAY 64
           ++ N   +   +AR+RG+RRRPWGKFAAEIRDPSRNGARLWLGTF+TAEEAARAYD+AA+
Sbjct: 6   RSSNNQSQDDKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAF 65

Query: 65  AFRGHLAILNFPNEYQSGNPHFAAAPS-SSATAISFAGNYSGGNANYRSGEVIEFEYLDN 124
             RGHLAILNFPNEY      ++  P  +S+++ S +G+ S   +     EV EFEYLD+
Sbjct: 66  NLRGHLAILNFPNEYYPRMDDYSLRPPYASSSSSSSSGSTSTNVSRQNQREVFEFEYLDD 125

Query: 125 ELLEELLQSE 134
           ++LEELL SE
Sbjct: 126 KVLEELLDSE 135

[Close]

BLAST of CmaCh17G013510 vs. TAIR10
Match: AT3G23220.1 (AT3G23220.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 135.6 bits (340), Expect = 2.4e-32
Identity = 73/124 (58.87%), Postives = 89/124 (71.77%), Query Frame = 1


Query: 13  STNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAI 72
           +TNE +YRG+R+RPWGK+AAEIRD +R+GAR+WLGTF+TAE+AARAYD+AA+  RG  AI
Sbjct: 8   NTNEMKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAI 67

Query: 73  LNFPNEYQ------SGNPHFAAAPSSSATAISFAGNYSGGNANYRSGEVIEFEYLDNELL 131
           LNFP+EYQ      +G+   A A SSS         Y GG       EVIEFEYLD+ LL
Sbjct: 68  LNFPHEYQMMKDGPNGSHENAVASSSS--------GYRGGGGGDDGREVIEFEYLDDSLL 123

[Close]

BLAST of CmaCh17G013510 vs. TAIR10
Match: AT5G43410.1 (AT5G43410.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 130.6 bits (327), Expect = 7.8e-31
Identity = 71/118 (60.17%), Postives = 91/118 (77.12%), Query Frame = 1


Query: 18  RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAILNFPN 77
           +YRG+RRRPWGK+AAEIRD  ++G R+WLGTFDTAEEAARAYDQAAY+ RG  AILNFP+
Sbjct: 14  KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFPH 73

Query: 78  EYQSGNPHFAAAPSSSATAISFAGNYSGGNANYRSGEVIEFEYLDNELLEELLQSEGE 136
           EY  G+        SS+TA++ + + S  +A+  S +V EFEYLD+ +LEELL+ EGE
Sbjct: 74  EYNMGSG------VSSSTAMAGSSSASA-SASSSSRQVFEFEYLDDSVLEELLE-EGE 123

[Close]

BLAST of CmaCh17G013510 vs. TAIR10
Match: AT1G04370.1 (AT1G04370.1 Ethylene-responsive element binding factor 14)

HSP 1 Score: 127.5 bits (319), Expect = 6.6e-30
Identity = 70/137 (51.09%), Postives = 95/137 (69.34%), Query Frame = 1


Query: 3   GKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQA 62
           G+ +G+GG     + +YRG+RRRPWGK+AAEIRD  ++G R+WLGTFDTAE+AARAYD+A
Sbjct: 5   GRSSGSGGG-GAEQGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRA 64

Query: 63  AYAFRGHLAILNFPNEYQSGNPHFAAAPSSSATAISFAGNYSGGNANYRSGEVIEFEYLD 122
           AY+ RG  AILNFP+EY  G         SS+TA          N++  S +V EFEYLD
Sbjct: 65  AYSMRGKAAILNFPHEYNMGT-------GSSSTA---------ANSSSSSQQVFEFEYLD 123

Query: 123 NELLEELLQSEGEGFDR 140
           + +L+ELL+  GE +++
Sbjct: 125 DSVLDELLE-YGENYNK 123

[Close]

BLAST of CmaCh17G013510 vs. TAIR10
Match: AT4G17500.1 (AT4G17500.1 ethylene responsive element binding factor 1)

HSP 1 Score: 104.0 bits (258), Expect = 7.8e-23
Identity = 46/66 (69.70%), Postives = 56/66 (84.85%), Query Frame = 1


Query: 19  YRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQAAYAFRGHLAILNFPNE 78
           YRG+R+RPWGKFAAEIRDP++NGAR+WLGTF+TAE+AA AYD+AA+  RG  A+LNFP  
Sbjct: 148 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLR 207

Query: 79  YQSGNP 85
             SG P
Sbjct: 208 VNSGEP 213

[Close]

BLAST of CmaCh17G013510 vs. NCBI nr
Match: gi|778727429|ref|XP_011659259.1| (PREDICTED: ethylene-responsive transcription factor ERF098-like [Cucumis sativus])

HSP 1 Score: 243.4 bits (620), Expect = 2.3e-61
Identity = 125/148 (84.46%), Postives = 133/148 (89.86%), Query Frame = 1


Query: 1   MEGKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60
           MEGK+TGN GKRSTNE+RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD
Sbjct: 1   MEGKRTGNEGKRSTNESRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60

Query: 61  QAAYAFRGHLAILNFPNEYQSGNPHF-------AAAPSSSATAISFAGNYSGGNANYRSG 120
           QAAYAFRGHLAILNFPNEYQSGNP+F       AA+ SSS T ISF GNYSG NA+  SG
Sbjct: 61  QAAYAFRGHLAILNFPNEYQSGNPNFGAGYGSSAASGSSSTTTISFGGNYSGNNASRGSG 120

Query: 121 EVIEFEYLDNELLEELLQSEGEGFDRRN 142
           EVIEFEYLDNELLEELLQSEGEG++R+N
Sbjct: 121 EVIEFEYLDNELLEELLQSEGEGYNRKN 148

[Close]

BLAST of CmaCh17G013510 vs. NCBI nr
Match: gi|659100764|ref|XP_008451255.1| (PREDICTED: ethylene-responsive transcription factor ERF098-like [Cucumis melo])

HSP 1 Score: 242.3 bits (617), Expect = 5.2e-61
Identity = 125/148 (84.46%), Postives = 131/148 (88.51%), Query Frame = 1


Query: 1   MEGKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60
           MEGK+TGN GKRSTNE+RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD
Sbjct: 65  MEGKRTGNEGKRSTNESRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 124

Query: 61  QAAYAFRGHLAILNFPNEYQSGNPHF-------AAAPSSSATAISFAGNYSGGNANYRSG 120
           QAAYAFRGHLAILNFPNEYQSGNP+F       AA  SSS T ISF GNYSG NA   SG
Sbjct: 125 QAAYAFRGHLAILNFPNEYQSGNPNFGAGYGSSAAPGSSSTTTISFGGNYSGNNARRGSG 184

Query: 121 EVIEFEYLDNELLEELLQSEGEGFDRRN 142
           EVIEFEYLDNELLEELLQSEGEG++R+N
Sbjct: 185 EVIEFEYLDNELLEELLQSEGEGYNRKN 212

[Close]

BLAST of CmaCh17G013510 vs. NCBI nr
Match: gi|1009147486|ref|XP_015891439.1| (PREDICTED: ethylene-responsive transcription factor ERF098-like [Ziziphus jujuba])

HSP 1 Score: 168.7 bits (426), Expect = 7.3e-39
Identity = 92/133 (69.17%), Postives = 105/133 (78.95%), Query Frame = 1


Query: 1   MEGKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60
           ME K+ GN  ++   EARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD
Sbjct: 1   MEPKRPGN--EQKGKEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60

Query: 61  QAAYAFRGHLAILNFPNEYQSGNPHFAAAPSSSATAISFAGNYSGGNANYRSGEVIEFEY 120
           +AA+AFRGHLAILNFPNEYQ GN   + A SSS +     G   GG +  +  EVIEFEY
Sbjct: 61  RAAFAFRGHLAILNFPNEYQYGNTSSSPAESSSVS----GGVGKGGMSRAQEVEVIEFEY 120

Query: 121 LDNELLEELLQSE 134
           LD++LLEELL ++
Sbjct: 121 LDDKLLEELLDTQ 127

[Close]

BLAST of CmaCh17G013510 vs. NCBI nr
Match: gi|359480011|ref|XP_002264390.2| (PREDICTED: ethylene-responsive transcription factor ERF098-like [Vitis vinifera])

HSP 1 Score: 168.7 bits (426), Expect = 7.3e-39
Identity = 94/147 (63.95%), Postives = 107/147 (72.79%), Query Frame = 1


Query: 1   MEGKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60
           MEG      G+    E RYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD
Sbjct: 1   MEGGGRRREGEDKAREVRYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYD 60

Query: 61  QAAYAFRGHLAILNFPNEYQSGNPHFAAAPSSS--------ATAISFAGNYSGGNANYRS 120
           +AAYAFRGHLAILNFPNE+Q  NP +    SSS        +++ S AG  +G  A+  S
Sbjct: 61  RAAYAFRGHLAILNFPNEHQYQNPGYGQTFSSSSSSSYSLGSSSSSSAGRSTGSGASISS 120

Query: 121 ----GEVIEFEYLDNELLEELLQSEGE 136
               G+VIEFEYLDN LLEELL+ +G+
Sbjct: 121 RDQEGQVIEFEYLDNNLLEELLEPQGD 147

[Close]

BLAST of CmaCh17G013510 vs. NCBI nr
Match: gi|590715937|ref|XP_007050315.1| (Integrase-type DNA-binding superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 168.3 bits (425), Expect = 9.5e-39
Identity = 91/133 (68.42%), Postives = 106/133 (79.70%), Query Frame = 1


Query: 3   GKKTGNGGKRSTNEARYRGIRRRPWGKFAAEIRDPSRNGARLWLGTFDTAEEAARAYDQA 62
           GK TGN GK +  E RYRGIRRRPWGKFAAEIRDP+RNGARLWLGTF+TAEEAARAYD+A
Sbjct: 8   GKNTGNNGKGNA-EVRYRGIRRRPWGKFAAEIRDPTRNGARLWLGTFETAEEAARAYDRA 67

Query: 63  AYAFRGHLAILNFPNEYQSGNPHFAAAPSSSATAISFAGNYSGGNANYRSGEVIEFEYLD 122
           A+AFRGH AILNFPNEYQS NP F  + +SS+T     GN   G    R  EVIEFEYLD
Sbjct: 68  AFAFRGHSAILNFPNEYQSHNPIFPPSLASSSTYGVGRGNPPRG----RGSEVIEFEYLD 127

Query: 123 NELLEELLQSEGE 136
           ++LLE+LL+++ +
Sbjct: 128 DKLLEDLLETQDD 135

The following BLAST results are available for this feature:

BLAST of CmaCh17G013510 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERF98_ARATH	4.9e-35	59.23	Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana GN=ERF09...	[more]
ERF95_ARATH	4.3e-31	58.87	Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana GN=ERF09...	[more]
ERF96_ARATH	1.4e-29	60.17	Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana GN=ERF09...	[more]
ERF97_ARATH	1.2e-28	51.09	Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana GN=ERF14 PE=...	[more]
EF100_ARATH	1.4e-21	69.70	Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=...	[more]

BLAST of CmaCh17G013510 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAA6_CUCSA	1.6e-61	84.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375830 PE=4 SV=1	[more]
F6HZI9_VITVI	5.1e-39	63.95	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g03220 PE=4 SV=...	[more]
A0A061DPX1_THECC	6.6e-39	68.42	Integrase-type DNA-binding superfamily protein, putative OS=Theobroma cacao GN=T...	[more]
A0A0D2NAN9_GOSRA	8.7e-39	67.16	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G176700 PE=4 SV=1	[more]
A5B7V7_VITVI	1.9e-38	63.27	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001296 PE=4 SV=1	[more]

BLAST of CmaCh17G013510 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G23230.1	2.8e-36	59.23	Integrase-type DNA-binding superfamily protein	[more]
AT3G23220.1	2.4e-32	58.87	Integrase-type DNA-binding superfamily protein	[more]
AT5G43410.1	7.8e-31	60.17	Integrase-type DNA-binding superfamily protein	[more]
AT1G04370.1	6.6e-30	51.09	Ethylene-responsive element binding factor 14	[more]
AT4G17500.1	7.8e-23	69.70	ethylene responsive element binding factor 1	[more]

BLAST of CmaCh17G013510 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778727429\|ref\|XP_011659259.1\|	2.3e-61	84.46	PREDICTED: ethylene-responsive transcription factor ERF098-like [Cucumis sativus...	[more]
gi\|659100764\|ref\|XP_008451255.1\|	5.2e-61	84.46	PREDICTED: ethylene-responsive transcription factor ERF098-like [Cucumis melo]	[more]
gi\|1009147486\|ref\|XP_015891439.1\|	7.3e-39	69.17	PREDICTED: ethylene-responsive transcription factor ERF098-like [Ziziphus jujuba...	[more]
gi\|359480011\|ref\|XP_002264390.2\|	7.3e-39	63.95	PREDICTED: ethylene-responsive transcription factor ERF098-like [Vitis vinifera]	[more]
gi\|590715937\|ref\|XP_007050315.1\|	9.5e-39	68.42	Integrase-type DNA-binding superfamily protein, putative [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G013510.1	CmaCh17G013510.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 19..30 score: 1.2E-11coord: 42..58 score: 1.2
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 18..78 score: 1.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 18..69 score: 1.6
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 18..82 score: 3.0
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 18..76 score: 25
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 18..77 score: 1.77
None	No IPR available	PANTHER	PTHR31190	FAMILY NOT NAMED	coord: 16..138 score: 6.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh17G013510	Cucsa.388540	Cucumber (Gy14) v1	cgycmaB1077
CmaCh17G013510	Cla014831	Watermelon (97103) v1	cmawmB331
CmaCh17G013510	Csa7G375830	Cucumber (Chinese Long) v2	cmacuB384
CmaCh17G013510	MELO3C015739	Melon (DHL92) v3.5.1	cmameB322
CmaCh17G013510	ClCG09G007760	Watermelon (Charleston Gray)	cmawcgB309
CmaCh17G013510	CSPI07G15620	Wild cucumber (PI 183967)	cmacpiB388
CmaCh17G013510	CmoCh08G002930	Cucurbita moschata (Rifu)	cmacmoB366
CmaCh17G013510	CmoCh17G013120	Cucurbita moschata (Rifu)	cmacmoB353
CmaCh17G013510	Lsi02G022160	Bottle gourd (USVL1VR-Ls)	cmalsiB346
CmaCh17G013510	MELO3C015739.2	Melon (DHL92) v3.6.1	cmamedB374
CmaCh17G013510	Cla97C09G170360	Watermelon (97103) v2	cmawmbB390
CmaCh17G013510	CsGy7G014130	Cucumber (Gy14) v2	cgybcmaB920
CmaCh17G013510	Carg11524	Silver-seed gourd	carcmaB0020

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh17G013510	CmaCh08G002950	Cucurbita maxima (Rimu)	cmacmaB374

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh17G013510	Cucumber (Chinese Long) v3	cmacucB0457
CmaCh17G013510	Wax gourd	cmawgoB0493
CmaCh17G013510	Cucurbita pepo (Zucchini)	cmacpeB371