CmoCh17G005680 (gene) Cucurbita moschata (Rifu)

NameCmoCh17G005680
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUbiquitin carboxyl-terminal hydrolase family protein
LocationCmo_Chr17 : 5838498 .. 5839772 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAGTTGGTTGTTTAGCAGGGTTAAGTTCTGTGGTTTCCCATGTAAAAACCAGAGAGGATCGAATTTAAATCACCTACAAAGTCGTTATCTGGTAAACATAAAACTGAAATGGGTGAAAGATAAAGACTTAGATTCTGTAGTGAGTGCTGAGAAGGACCTCAAGGCTGTTTGCTTTCTTGTATCCATAATCTCTTCAAGTCTTGAACAATGCGTACCGATCTACCGTCTGCGTTGCCATCGTCGGCAGCTTGGTCTTCCGAATGATGTCAAGATGTCTACCTTTATTAGGAGATACCCTTCTATCTTTCATGAGTCACATATTCGTGACAGTGCAGGCACTCCTGTGCCATCTTTTGGCTTAACTCCAGAGGCTAGGGAACTTTATGAGGAAGAAATCGTTGTCGTTCGACAATGTTGGACGGATATTCGATCTAGGCTTTGCAGATTGCTAATGCTCACGAGTGGTACGACACTTCCTTTACAGACAATTGACCAGTTGAGATGGGACATGGGGCTGCCATATGATTATCGGAACTCTTTCATTCCATATAACCATGACTTGTTTTCATTTGTCCAGCTCCGTGATGATCGAGTCGGGTTGAAACTTCTATCCTGGGATGATGATCTTGCTGTTTCTGAACTGCAGAAGAACGCTGGTTCCCAACAGGTGGAAGAAGACGTAAGAAATGGCTGTTTGGCCTTTCCAATTGGATTCACAAGAGGTTTTGGATTGAGGAGAAAATGTATGGATTGGTTAAAAGAATGGCAGAAGCTTCCTTACACTTCTCCATATTGTGATGCCTCCCATTTGGATCCCCGTACCGATGCGTCCGAAAAGAGGATTGTCGGAGTCTTTCATGAACTTCTCCACCTTACCTTGCAAAAGAAAACCGAACGCAAGAATGTAAGCAACCTCCGCAAACCGTTCTCTATGCCTCAGAAGTTCACAAAAGTGTTCGAGCGTCATCCTGGTATCTTTTACATCTCTAAGAAGAATGACACACAGACTGTAATTCTTCGAGAAGCATACGACGGTGACAAGCTTCTGCAGAAGCACCCTCTTGTTAGCATCAGGGAAAAATTTGCAAACATGTCGAGGAAAGGTCAACTAGATAGAAGCAGAGGTTTATACAAAAAGGAAGATCCATTTGGACATTTTCATCATGATGAAGTAGATGAAACTCGATACAGTTCCGAAGAAATGTCCGACTATAACTTGCTTTCGGAATATGATTCGGAATCAGATGACCCGATCGACAACAACTGCTGA

mRNA sequence

ATGGTGAGTTGGTTGTTTAGCAGGGTTAAGTTCTGTGGTTTCCCATGTAAAAACCAGAGAGGATCGAATTTAAATCACCTACAAAGTCGTTATCTGGTAAACATAAAACTGAAATGGGTGAAAGATAAAGACTTAGATTCTGTAGTGAGTGCTGAGAAGGACCTCAAGGCTGTTTGCTTTCTTGTATCCATAATCTCTTCAAGTCTTGAACAATGCGTACCGATCTACCGTCTGCGTTGCCATCGTCGGCAGCTTGGTCTTCCGAATGATGTCAAGATGTCTACCTTTATTAGGAGATACCCTTCTATCTTTCATGAGTCACATATTCGTGACAGTGCAGGCACTCCTGTGCCATCTTTTGGCTTAACTCCAGAGGCTAGGGAACTTTATGAGGAAGAAATCGTTGTCGTTCGACAATGTTGGACGGATATTCGATCTAGGCTTTGCAGATTGCTAATGCTCACGAGTGGTACGACACTTCCTTTACAGACAATTGACCAGTTGAGATGGGACATGGGGCTGCCATATGATTATCGGAACTCTTTCATTCCATATAACCATGACTTGTTTTCATTTGTCCAGCTCCGTGATGATCGAGTCGGGTTGAAACTTCTATCCTGGGATGATGATCTTGCTGTTTCTGAACTGCAGAAGAACGCTGGTTCCCAACAGGTGGAAGAAGACGTAAGAAATGGCTGTTTGGCCTTTCCAATTGGATTCACAAGAGGTTTTGGATTGAGGAGAAAATGTATGGATTGGTTAAAAGAATGGCAGAAGCTTCCTTACACTTCTCCATATTGTGATGCCTCCCATTTGGATCCCCGTACCGATGCGTCCGAAAAGAGGATTGTCGGAGTCTTTCATGAACTTCTCCACCTTACCTTGCAAAAGAAAACCGAACGCAAGAATGTAAGCAACCTCCGCAAACCGTTCTCTATGCCTCAGAAGTTCACAAAAGTGTTCGAGCGTCATCCTGGTATCTTTTACATCTCTAAGAAGAATGACACACAGACTGTAATTCTTCGAGAAGCATACGACGGTGACAAGCTTCTGCAGAAGCACCCTCTTGTTAGCATCAGGGAAAAATTTGCAAACATGTCGAGGAAAGGTCAACTAGATAGAAGCAGAGGTTTATACAAAAAGGAAGATCCATTTGGACATTTTCATCATGATGAAGTAGATGAAACTCGATACAGTTCCGAAGAAATGTCCGACTATAACTTGCTTTCGGAATATGATTCGGAATCAGATGACCCGATCGACAACAACTGCTGA

Coding sequence (CDS)

ATGGTGAGTTGGTTGTTTAGCAGGGTTAAGTTCTGTGGTTTCCCATGTAAAAACCAGAGAGGATCGAATTTAAATCACCTACAAAGTCGTTATCTGGTAAACATAAAACTGAAATGGGTGAAAGATAAAGACTTAGATTCTGTAGTGAGTGCTGAGAAGGACCTCAAGGCTGTTTGCTTTCTTGTATCCATAATCTCTTCAAGTCTTGAACAATGCGTACCGATCTACCGTCTGCGTTGCCATCGTCGGCAGCTTGGTCTTCCGAATGATGTCAAGATGTCTACCTTTATTAGGAGATACCCTTCTATCTTTCATGAGTCACATATTCGTGACAGTGCAGGCACTCCTGTGCCATCTTTTGGCTTAACTCCAGAGGCTAGGGAACTTTATGAGGAAGAAATCGTTGTCGTTCGACAATGTTGGACGGATATTCGATCTAGGCTTTGCAGATTGCTAATGCTCACGAGTGGTACGACACTTCCTTTACAGACAATTGACCAGTTGAGATGGGACATGGGGCTGCCATATGATTATCGGAACTCTTTCATTCCATATAACCATGACTTGTTTTCATTTGTCCAGCTCCGTGATGATCGAGTCGGGTTGAAACTTCTATCCTGGGATGATGATCTTGCTGTTTCTGAACTGCAGAAGAACGCTGGTTCCCAACAGGTGGAAGAAGACGTAAGAAATGGCTGTTTGGCCTTTCCAATTGGATTCACAAGAGGTTTTGGATTGAGGAGAAAATGTATGGATTGGTTAAAAGAATGGCAGAAGCTTCCTTACACTTCTCCATATTGTGATGCCTCCCATTTGGATCCCCGTACCGATGCGTCCGAAAAGAGGATTGTCGGAGTCTTTCATGAACTTCTCCACCTTACCTTGCAAAAGAAAACCGAACGCAAGAATGTAAGCAACCTCCGCAAACCGTTCTCTATGCCTCAGAAGTTCACAAAAGTGTTCGAGCGTCATCCTGGTATCTTTTACATCTCTAAGAAGAATGACACACAGACTGTAATTCTTCGAGAAGCATACGACGGTGACAAGCTTCTGCAGAAGCACCCTCTTGTTAGCATCAGGGAAAAATTTGCAAACATGTCGAGGAAAGGTCAACTAGATAGAAGCAGAGGTTTATACAAAAAGGAAGATCCATTTGGACATTTTCATCATGATGAAGTAGATGAAACTCGATACAGTTCCGAAGAAATGTCCGACTATAACTTGCTTTCGGAATATGATTCGGAATCAGATGACCCGATCGACAACAACTGCTGA
BLAST of CmoCh17G005680 vs. Swiss-Prot
Match: RPD1_ARATH (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.5e-26
Identity = 97/362 (26.80%), Postives = 173/362 (47.79%), Query Frame = 1

Query: 40  VKDKDLDSVVSAEKDLKAVCFLVSIISSSLEQCVPIYRLRCHRRQLGLP-NDVKMSTFIR 99
           V+D   D+ +  EK ++ V    S+I S     + I  L    R+LGL     +   F+ 
Sbjct: 47  VRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLL 106

Query: 100 RYPSIFHESHIRDSAGTPVPSFGLTPEARELYEEEIVVVRQCWTDIRSRLCRLLMLTSGT 159
           ++P +F    I +     +    LT +A +    E   V     D  +RL +L+M+++  
Sbjct: 107 KFPHVFE---IYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMSNTG 166

Query: 160 TLPLQTIDQLRWDMGLPYDYRNSFIPYNHDLFSFVQLRDDRVG-LKLLSWDDDLAVSELQ 219
            + L+ +   R + GLP D+  S I  +   F  +   + R   ++++  D +L++  ++
Sbjct: 167 RIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPNLSICAIE 226

Query: 220 KNAGSQQVE--------EDVRNGCLAFPIGFTRGFGLRRKCMDWLKEWQKLPYTSPYCDA 279
           +    +++E        EDVR    +F + F  GF + +     + +WQ+LPY SPY D 
Sbjct: 227 R---VREIEYRTKGIDAEDVR---FSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDI 286

Query: 280 SHLDPRT----DASEKRIVGVFHELLHLTLQKKTERKNVSNLRKPFSMPQKFTKVFERHP 339
           S  D R+    +  EKR V   HELL LT++KK   + +++ R   ++P+K  +   +H 
Sbjct: 287 SGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQ 346

Query: 340 GIFYISKKND---TQTVILREAYDGDKLLQKHPLVSIREKFANM----SRKGQLDRSRGL 381
           GIFYIS + +     TV LRE Y   +L++ + +   R + A +     RK ++D     
Sbjct: 347 GIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAKVDAELVR 399

BLAST of CmoCh17G005680 vs. TrEMBL
Match: A0A0A0KAR1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G022360 PE=4 SV=1)

HSP 1 Score: 756.5 bits (1952), Expect = 1.7e-215
Identity = 363/424 (85.61%), Postives = 395/424 (93.16%), Query Frame = 1

Query: 1   MVSWLFSRVKFCGFPCKNQRGSNLNHLQSRYLVNIKLKWVKDKDLDSVVSAEKDLKAVCF 60
           MV+WLFSR+K  GF CKNQRG NLN+LQ RYLVNI+LKWVKDKDLD+VVSAEKDLKAVCF
Sbjct: 1   MVAWLFSRLKLSGFLCKNQRGLNLNYLQGRYLVNIRLKWVKDKDLDTVVSAEKDLKAVCF 60

Query: 61  LVSIISSSLEQCVPIYRLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHIRDSAGTPVPSF 120
           LVSIISSS E C+P+Y LR HRRQLG+PNDVKMSTFIRRYPSIFHESHI DSAGT VPSF
Sbjct: 61  LVSIISSSPEHCLPVYHLRRHRRQLGIPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120

Query: 121 GLTPEARELYEEEIVVVRQCWTDIRSRLCRLLMLTSGTTLPLQTIDQLRWDMGLPYDYRN 180
            LTPEAREL+ E+I+V+RQCWTD+RSRLCRLLMLTSG TLPLQTIDQLRWDMGLPYDY+N
Sbjct: 121 CLTPEARELHAEQIIVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180

Query: 181 SFIPYNHDLFSFVQLRDDRVGLKLLSWDDDLAVSELQKNAGSQQVEEDVRNGCLAFPIGF 240
           SFIPYNHD+FSF++L+D R+GLKLL WD+DLAVSELQKNA SQQ+EED+RNG LAFPIGF
Sbjct: 181 SFIPYNHDMFSFIRLQDHRIGLKLLKWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240

Query: 241 TRGFGLRRKCMDWLKEWQKLPYTSPYCDASHLDPRTDASEKRIVGVFHELLHLTLQKKTE 300
           TRGFGL RKCMDWLKEWQ LPYTSPYCDASHLDPRTD SEKRIVGVFHELLHLTLQKKTE
Sbjct: 241 TRGFGLNRKCMDWLKEWQTLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300

Query: 301 RKNVSNLRKPFSMPQKFTKVFERHPGIFYISKKNDTQTVILREAYDGDKLLQKHPLVSIR 360
           RKNVSNLRKPFS+PQKFTKVFERHPGIFYISKK+DTQTVILREAYDGDKL+QKHPLVSIR
Sbjct: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLVQKHPLVSIR 360

Query: 361 EKFANMSRKGQLDRSRGLYKKEDPFGHFHHDEVDETRYSSEEMSDYNLLSEYDSESDDPI 420
           E+F +M RKGQLDRSRGLYKK DP GHFH+DEV+ET YSSEE+SD+N+L EYDSESD  I
Sbjct: 361 ERFTSMLRKGQLDRSRGLYKK-DPSGHFHNDEVNETLYSSEEVSDHNMLLEYDSESDGLI 420

Query: 421 DNNC 425
           DNNC
Sbjct: 421 DNNC 423

BLAST of CmoCh17G005680 vs. TrEMBL
Match: M5XWR3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006119mg PE=4 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 2.9e-154
Identity = 277/418 (66.27%), Postives = 327/418 (78.23%), Query Frame = 1

Query: 4   WLFSRVKFCGFPCKNQRGSNLNHLQSRYLVNIKLKWVKDKDLDSVVSAEKDLKAVCFLVS 63
           W F  VK  GF          N+   R LVN+KLKWVKD+ LD+VV+AE+DLKA C LVS
Sbjct: 3   WFFLFVKVGGFGFLRGCQHGFNYQHKRGLVNVKLKWVKDRGLDAVVTAERDLKAACILVS 62

Query: 64  IISSSLEQCVPIYRLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHIRDSAGTPVPSFGLT 123
           IISSS + C+PIYRL CHR QL LP D+K+STFIR++PS+F ESH   S G  VP F LT
Sbjct: 63  IISSSPQCCLPIYRLSCHRGQLSLPCDLKLSTFIRKFPSVFVESHTFWSGGARVPCFSLT 122

Query: 124 PEARELYEEEIVVVRQCWTDIRSRLCRLLMLTSGTTLPLQTIDQLRWDMGLPYDYRNSFI 183
           PEA +LY EE+ V++Q   D+ +RL +LLMLT G TLPLQT+DQL+WD+GLPYDY++S I
Sbjct: 123 PEALQLYHEELNVLQQNQMDLINRLQKLLMLTQGWTLPLQTLDQLKWDLGLPYDYQHSVI 182

Query: 184 PYNHDLFSFVQLRDDRVGLKLLSWDDDLAVSELQKNAGSQQVEEDVRNGCLAFPIGFTRG 243
           P++ DLFSF++L DDRVGLKLLSWD+DLAVS+LQKN+  QQ EED R+GCLAFP+GFTRG
Sbjct: 183 PHHPDLFSFIRLPDDRVGLKLLSWDEDLAVSQLQKNSAIQQKEEDARSGCLAFPVGFTRG 242

Query: 244 FGLRRKCMDWLKEWQKLPYTSPYCDASHLDPRTDASEKRIVGVFHELLHLTLQKKTERKN 303
           FGL+RKCM+WLKEWQ LPYTSPY DAS+LDPRTD SEKRIVGVFHELL LT+ KKTERKN
Sbjct: 243 FGLKRKCMEWLKEWQTLPYTSPYSDASYLDPRTDVSEKRIVGVFHELLQLTIHKKTERKN 302

Query: 304 VSNLRKPFSMPQKFTKVFERHPGIFYISKKNDTQTVILREAYDGDKLLQKHPLVSIREKF 363
           VSNLRKP ++PQKFTKVFERHPGIFYISKK  TQTVILREAY+  +LLQKHP V +RE+F
Sbjct: 303 VSNLRKPLALPQKFTKVFERHPGIFYISKKCATQTVILREAYNHQQLLQKHPTVDLRERF 362

Query: 364 ANMSRKGQLDRSRGLYKKEDPFG---HFHHDEVDETRYSSEEMSDYNLLSEYDSESDD 419
           A + RKG LDRS+GLYKK    G     H D++   + SSEE S   L  EYDS+  D
Sbjct: 363 ARLLRKGLLDRSKGLYKKSKGDGVEVDPHVDDIGNNQSSSEEESVNKLFYEYDSDKPD 420

BLAST of CmoCh17G005680 vs. TrEMBL
Match: W9QX20_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009881 PE=4 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 1.9e-153
Identity = 279/414 (67.39%), Postives = 324/414 (78.26%), Query Frame = 1

Query: 1   MVSW-LFSRVKFCGFPCKNQRGSNLNHLQSRYLVNIKLKWVKDKDLDSVVSAEKDLKAVC 60
           M  W LF +V+  GF CK+Q G   ++ Q   LVN+KLKWVKDK LD+ V  EKDLKA C
Sbjct: 1   MARWFLFGKVESSGFLCKSQSG--FSYQQKCSLVNVKLKWVKDKALDAAVIVEKDLKAAC 60

Query: 61  FLVSIISSSLEQCVPIYRLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHIRDSAGTPVPS 120
            L +IISS+ ++ +PIY L CHR QLGLP D+K+STFIRRYPS+F ESH  D+ GT VP 
Sbjct: 61  TLATIISSTPQRRLPIYHLSCHRGQLGLPKDLKLSTFIRRYPSVFLESHFLDTGGTRVPC 120

Query: 121 FGLTPEARELYEEEIVVVRQCWTDIRSRLCRLLMLTSGTTLPLQTIDQLRWDMGLPYDYR 180
           FGLT EA EL+EEE+ +V Q   D+ +RL +LLMLT   TLPLQTIDQL+WD GLPYDY+
Sbjct: 121 FGLTHEAVELHEEELHLVEQNEMDLLNRLRKLLMLTRDWTLPLQTIDQLKWDFGLPYDYQ 180

Query: 181 NSFIPYNHDLFSFVQLRDDRVGLKLLSWDDDLAVSELQKNAGSQQVEEDVRNGCLAFPIG 240
           +SFIP + DL SFVQL D RVGLKL  WDDD AVSEL KN+ SQ  ++D +N CLAFPIG
Sbjct: 181 HSFIPRHPDLLSFVQLPDKRVGLKLNIWDDDHAVSELLKNSASQPKQQDTKNDCLAFPIG 240

Query: 241 FTRGFGLRRKCMDWLKEWQKLPYTSPYCDASHLDPRTDASEKRIVGVFHELLHLTLQKKT 300
           FTRGFGL+RKCM+WLKEWQ+LPYTSPY +AS+LDPRTD SEKRIVGVFHELLHLT+QKKT
Sbjct: 241 FTRGFGLKRKCMEWLKEWQRLPYTSPYSEASYLDPRTDVSEKRIVGVFHELLHLTIQKKT 300

Query: 301 ERKNVSNLRKPFSMPQKFTKVFERHPGIFYISKKNDTQTVILREAYDGDKLLQKHPLVSI 360
           ERKNVSNLRKP ++PQKFTKVFERHPGIFYISKK DTQTVILREAYDG  LLQ+H L  I
Sbjct: 301 ERKNVSNLRKPLALPQKFTKVFERHPGIFYISKKCDTQTVILREAYDGQNLLQRHSLSEI 360

Query: 361 REKFANMSRKGQLDRSRGLYKK-------EDPFGHFHHDEVDETRYSSEEMSDY 407
           REKFA M R+G LD+S+GLYKK       EDP  +  H EVD +  SSEE  +Y
Sbjct: 361 REKFARMLREGLLDKSKGLYKKTRRDDMVEDPLKYECHFEVDSSESSSEEEFEY 412

BLAST of CmoCh17G005680 vs. TrEMBL
Match: F6I4B7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0062g01420 PE=4 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 1.5e-150
Identity = 277/423 (65.48%), Postives = 322/423 (76.12%), Query Frame = 1

Query: 1   MVSWLF-SRVKFCGFPCKNQRGSNLNHLQSRYLVNIKLKWVKDKDLDSVVSAEKDLKAVC 60
           MV WL   R    GF   +QRG    + Q   LVN+KLKWVKD+ LD+VV+ E++L+A C
Sbjct: 1   MVWWLLLGRAGVSGFLYVHQRG--FIYQQKFSLVNVKLKWVKDRALDAVVAGERNLRATC 60

Query: 61  FLVSIISSSLEQCVPIYRLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHIRDSAGTPVPS 120
            LVSIISS      PIYRL  HR QLGLP+D+K++TFIRR+P+IF E H+ DS GT VP 
Sbjct: 61  TLVSIISSDPHDGFPIYRLSRHRGQLGLPHDIKLATFIRRFPNIFDEFHVLDSGGTRVPW 120

Query: 121 FGLTPEARELYEEEIVVVRQCWTDIRSRLCRLLMLTSGTTLPLQTIDQLRWDMGLPYDYR 180
           F LTPEA  L+ E +  ++Q   D+ +RL +LLMLT    LPLQTIDQL+WD GLPYDY 
Sbjct: 121 FRLTPEALNLHHEALNALQQNEMDLLNRLRKLLMLTCERMLPLQTIDQLKWDFGLPYDYC 180

Query: 181 NSFIPYNHDLFSFVQLRDDRVGLKLLSWDDDLAVSELQKNAGSQQVEEDVRNGCLAFPIG 240
           +S +P   +LFS V L DDRVGLKL+SWDD LAVS+LQKNA   Q EEDVRNGCL FPI 
Sbjct: 181 HSLVPSYPELFSMVHLPDDRVGLKLISWDDRLAVSQLQKNAAFNQKEEDVRNGCLTFPIR 240

Query: 241 FTRGFGLRRKCMDWLKEWQKLPYTSPYCDASHLDPRTDASEKRIVGVFHELLHLTLQKKT 300
           FTRGFGL+RKCM WL+EWQ LPYTSPY DASHLDPRTD SEKRIVGVFHELLHLTLQK+T
Sbjct: 241 FTRGFGLKRKCMKWLEEWQMLPYTSPYTDASHLDPRTDVSEKRIVGVFHELLHLTLQKRT 300

Query: 301 ERKNVSNLRKPFSMPQKFTKVFERHPGIFYISKKNDTQTVILREAYDGDKLLQKHPLVSI 360
           ERKNVSNLRKP S PQKFTKVFERHPGIFYISKK+D+QTV+LREAYD  +LLQKHP+V I
Sbjct: 301 ERKNVSNLRKPLSCPQKFTKVFERHPGIFYISKKSDSQTVVLREAYDQQQLLQKHPIVEI 360

Query: 361 REKFANMSRKGQLDRSRGLYKKE-------DPFGHFHHDEVDETRYSSEEMSDYNLLSEY 416
           RE+FANM  KG LDRSRGLYK+        DP    ++DE+++    SE  SD NLLSEY
Sbjct: 361 RERFANMMEKGLLDRSRGLYKRSGINGLEVDPSKDVYYDELNDNERKSESESDRNLLSEY 420

BLAST of CmoCh17G005680 vs. TrEMBL
Match: A0A0D2PS09_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G127200 PE=4 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 1.6e-149
Identity = 272/418 (65.07%), Postives = 325/418 (77.75%), Query Frame = 1

Query: 4   WLFSRVKFCGFPCKNQRGSNLNHLQSRYLVNIKLKWVKDKDLDSVVSAEKDLKAVCFLVS 63
           +L  + K  GF C  +RG   N+ Q+  LVN+KLKWVKDK LD+V++ E+DL+A C LVS
Sbjct: 5   FLCGKGKVFGFSCGLRRG--FNYQQTFSLVNVKLKWVKDKALDAVIAGERDLRAACNLVS 64

Query: 64  IISSSLEQCVPIYRLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHIRDSAGTPVPSFGLT 123
           I+SS+ + C+PIY L  HR QLGLP+D K+STFIRRYP+IFHES++ DSAGT VP F LT
Sbjct: 65  ILSSAPDFCLPIYHLSRHRGQLGLPHDHKLSTFIRRYPTIFHESYVFDSAGTLVPCFELT 124

Query: 124 PEARELYEEEIVVVRQCWTDIRSRLCRLLMLTSGTTLPLQTIDQLRWDMGLPYDYRNSFI 183
            EA  LY EE+ V+R    D+  RLC+LLMLT    LPLQTIDQL+WD+GLPY Y ++ I
Sbjct: 125 LEALNLYHEELGVIRDNMIDLIDRLCKLLMLTKDRILPLQTIDQLKWDLGLPYFYIDNLI 184

Query: 184 PYNHDLFSFVQLRDDRVGLKLLSWDDDLAVSELQKNAGSQQVEEDVRNGCLAFPIGFTRG 243
           P   DLFS  +L DDR+GLKLLSWDD LAVS+L+KN  +QQ EED++N CLAFPIGFTRG
Sbjct: 185 PNYADLFSLFRLPDDRIGLKLLSWDDTLAVSQLEKNV-AQQTEEDLKNNCLAFPIGFTRG 244

Query: 244 FGLRRKCMDWLKEWQKLPYTSPYCDASHLDPRTDASEKRIVGVFHELLHLTLQKKTERKN 303
           FGL+RKCM WL+EWQKLPYTSPY DASHLDPRTD SEKRIVGVFHEL HLT+QKKTERKN
Sbjct: 245 FGLKRKCMGWLEEWQKLPYTSPYADASHLDPRTDVSEKRIVGVFHELFHLTIQKKTERKN 304

Query: 304 VSNLRKPFSMPQKFTKVFERHPGIFYISKKNDTQTVILREAYDGDKLLQKHPLVSIREKF 363
           VSNLRKP S+PQKFTKVFERHPGIFYISK +DTQTV+LREAYD  +++Q+HPLV IRE+F
Sbjct: 305 VSNLRKPLSLPQKFTKVFERHPGIFYISKMSDTQTVVLREAYDCQRIVQRHPLVDIRERF 364

Query: 364 ANMSRKGQLDRSRGLYKKEDPFGHFHHDEVDE------TRYSSEEMSDYNLLSEYDSE 416
           A+M RKG  DRSRGLYKK    GH    ++ +          SE  SD +L SEY+S+
Sbjct: 365 ASMMRKGFRDRSRGLYKKTAYIGHKDPLKIVQGHKGGGNGLDSEVDSDDDLFSEYNSD 419

BLAST of CmoCh17G005680 vs. TAIR10
Match: AT5G48040.1 (AT5G48040.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 464.5 bits (1194), Expect = 6.8e-131
Identity = 250/418 (59.81%), Postives = 302/418 (72.25%), Query Frame = 1

Query: 4   WLFSR-VKFCGFPCKNQRGSNLNHLQSRYLVNIKLKWVKDKDLDSVVSAEKDLKAVCFLV 63
           WL  R V      CK +   +  + Q   LVN+KLKWVKD++LD+VV  EK L+AVC LV
Sbjct: 3   WLLQRRVSLSTSLCKCRERFDFFYQQRCGLVNVKLKWVKDRELDAVVVREKHLRAVCNLV 62

Query: 64  SIISSSLEQCVPIYRLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHIRDSAGTPVPSFGL 123
           S+IS+S +  +PI++L  HR QLGLP ++K+S FIRRYP+IF E    DSAGT VP FGL
Sbjct: 63  SVISASPDLRLPIFKLLPHRGQLGLPQELKLSAFIRRYPNIFVEHCYWDSAGTSVPCFGL 122

Query: 124 TPEARELYEEEIVVVRQCWTDIRSRLCRLLMLTSGTTLPLQTIDQLRWDMGLPYDYRNSF 183
           T E  +LY EE+ V R    D+  RLC+LLMLT   TL L +ID LRWD+GLPYDYR+S 
Sbjct: 123 TRETIDLYYEEVDVSRVNERDVLVRLCKLLMLTCERTLSLHSIDHLRWDLGLPYDYRDSL 182

Query: 184 IPYNHDLFSFVQLRDDRVGLKLLSWDDDLAVSELQKNAGSQQVEEDVRNG-CLAFPIGFT 243
           I  + DLFS V+L  D  GLKL+ WD+ LAVS++Q       + EDV N   +AFP+ FT
Sbjct: 183 ITKHPDLFSLVKLSSDLDGLKLIHWDEHLAVSQMQ-------LREDVGNDERMAFPVKFT 242

Query: 244 RGFGLRRKCMDWLKEWQKLPYTSPYCDASHLDPRTDASEKRIVGVFHELLHLTLQKKTER 303
           RGFGL+RK ++WL+EWQ+LPYTSPY DASHLDPRTD SEKR VGVFHELLHLT+ KKTER
Sbjct: 243 RGFGLKRKSIEWLQEWQRLPYTSPYVDASHLDPRTDLSEKRNVGVFHELLHLTIGKKTER 302

Query: 304 KNVSNLRKPFSMPQKFTKVFERHPGIFYISKKNDTQTVILREAYDGDKLLQKHPLVSIRE 363
           KNVSNLRKPF++PQKFTKVFERHPGIFYIS K DTQTVILREAYD   L++KHPLV +RE
Sbjct: 303 KNVSNLRKPFALPQKFTKVFERHPGIFYISMKCDTQTVILREAYDRRHLIEKHPLVEVRE 362

Query: 364 KFANMSRKGQLDRSRGLYKKEDPFGHFHHDEVDETRY----SSEEMSDYNLLSEYDSE 416
           KFANM  +G LDRSRGLY+K         + + +T Y      EE  D NL+S YDS+
Sbjct: 363 KFANMMNEGFLDRSRGLYQKSVE-ADLEKNNI-KTSYPVWSDEEEELDNNLISGYDSD 411

BLAST of CmoCh17G005680 vs. TAIR10
Match: AT3G58520.1 (AT3G58520.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 265.4 bits (677), Expect = 6.1e-71
Identity = 155/397 (39.04%), Postives = 232/397 (58.44%), Query Frame = 1

Query: 32  LVNIKLKWVKDKDLDSVVSAEKDLKAVCFLVSIISSSLEQCVPIYRLRCHRRQLGLPNDV 91
           +  ++LKWVK+K+LD V+  E DLKA C L   I  S    +    +   ++ LGL   V
Sbjct: 28  MTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIKRSPTGFLTAKSVADWQKLLGLT--V 87

Query: 92  KMSTFIRRYPSIFHE-SHIRDSAGTPVPSFGLTPEARELYEEEIVVVRQCWTDIRSRLCR 151
            +  F+RRYP++FHE  H R ++   +P F LT  A  L  +E ++ +    D   RLCR
Sbjct: 88  PVLRFLRRYPTLFHEFPHARYAS---LPCFKLTDTALMLDSQEEIIHQSHEADTVERLCR 147

Query: 152 LLMLTSGTTLPLQTIDQLRWDMGLPYDYRNSFIPYNHDLFSFVQLRDDRVGLKLLSWDDD 211
           +LM+    T+ L+++  L++D+GLP +Y  + +    D F FV+  +    LKL+ W D+
Sbjct: 148 VLMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNPCLKLVKWRDE 207

Query: 212 LAVSELQKN------AGSQQVEEDVRNG--CLAFPIGFTRGFGLRRKCMDWLKEWQKLPY 271
            A S LQK       +G +    + + G   L FP+ F RG+G ++K   W+ E+QKLPY
Sbjct: 208 FAFSALQKRNEDNDVSGEESRYREFKRGQSTLTFPMSFPRGYGAQKKVKAWMDEFQKLPY 267

Query: 272 TSPYCDASHLDPRTDASEKRIVGVFHELLHLTLQKKTERKNVSNLRKPFSMPQKFTKVFE 331
            SPY D S++DP +D  EKR V V HELL LT+ KKT+R  + ++R   ++P KFT++F 
Sbjct: 268 ISPYDDPSNIDPESDLMEKRAVAVLHELLSLTIHKKTKRNYLRSMRAELNIPHKFTRLFT 327

Query: 332 RHPGIFYISKKNDTQTVILREAYDGDKLLQKHPLVSIREKFANMSRKGQLDRSRGL--YK 391
           R+PGIFY+S K  T TVIL+E Y   KL+  HPL  +R+KF ++ R G L R+RGL    
Sbjct: 328 RYPGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKFYHVMRTGFLYRARGLGMVS 387

Query: 392 KEDPFGHFHHDEVDETRYSSEEMSDYNLLSEYDSESD 418
           KE+       D+++E     EE+ + + L E DSE++
Sbjct: 388 KEELLLDRPEDDLEEEGSEEEEIVEGSELEE-DSEAE 418

BLAST of CmoCh17G005680 vs. TAIR10
Match: AT2G39120.1 (AT2G39120.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 227.6 bits (579), Expect = 1.4e-59
Identity = 145/387 (37.47%), Postives = 207/387 (53.49%), Query Frame = 1

Query: 17  KNQRGSNLNHLQSRYLVNIKLKWVKDKDLDSV--VSAEKDLKAVCFLVSIISSSLEQCVP 76
           K    S  N  Q R  V++ +KW +D   D++  +     LK+V  L + I     +C+P
Sbjct: 9   KTVASSCTNLTQKRTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIP 68

Query: 77  IYRLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHIRDSAGTPVPSFGLTPEARELYEEEI 136
           I  +    RQ  +    K++ F+R++PSIF E          +P F LTPEA EL  +E 
Sbjct: 69  ISAISKKTRQFDV--STKIAHFLRKFPSIFEEFV---GPEYNLPWFRLTPEATELDRQER 128

Query: 137 VVVRQCWTDIRSRLCRLLMLTSGTTLPLQTIDQLRWDMGLPYDYRNSFIPYNHDL-FSFV 196
           VV +    D+R RL +L++++    LPL  +  ++W +GLP DY   F   N D  F FV
Sbjct: 129 VVYQTSADDLRDRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYLQ-FPDMNLDSSFRFV 188

Query: 197 QLRDDRVGLKLLSWDDDLAVSELQKNA-----GSQQVEEDVRNGCLAFPIGFTRGFGLRR 256
            + D   GL +     D  +S LQKNA     G   +EE      + FP+  ++G  LR 
Sbjct: 189 DMEDGVKGLAVDYNGGDKVLSVLQKNAMKKRRGEVSLEE------IEFPLFPSKGCRLRV 248

Query: 257 KCMDWLKEWQKLPYTSPYCDASHLDPRTDASEKRIVGVFHELLHLTLQKKTERKNVSNLR 316
           K  DWL E+QKLPY SPY D S LDP +D +EKR+VG  HELL L ++   ERK +  L+
Sbjct: 249 KIEDWLMEFQKLPYVSPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLK 308

Query: 317 KPFSMPQKFTKVFERHPGIFYISKKNDTQTVILREAYDGDKLLQKHPLVSIREKFANMSR 376
           K F +PQK  K FERHP IFY+S KN T T ILRE Y     ++ HP++ +R+K+  + +
Sbjct: 309 KHFGLPQKVHKAFERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMK 368

Query: 377 KGQLDRSRGLYKKEDPFGHFHHDEVDE 396
             +L     L  + + FG      VD+
Sbjct: 369 NSELI----LKSRRNSFGFRDEGVVDK 379

BLAST of CmoCh17G005680 vs. TAIR10
Match: AT4G24320.1 (AT4G24320.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 207.2 bits (526), Expect = 2.0e-53
Identity = 129/364 (35.44%), Postives = 191/364 (52.47%), Query Frame = 1

Query: 28  QSRYLVNIKLKWVKDKDLDSVVSAEKDLKAVCFLVSIISSSLEQCVPIYRLRCHRRQLGL 87
           Q R  VN ++KWV D  LD  V  EK+LK V  L   I SS  + +P+  L   +  + L
Sbjct: 14  QRRTFVNARVKWVSDHYLDEAVQREKNLKQVISLKDRIVSSPSKSLPLSSLSLLKPLVNL 73

Query: 88  PNDVKMSTFIRRYPSIF--------HESHIRDSAGTPVPSFGLTPEARELY-EEEIVVVR 147
              +  + F ++YPS+F        H  H+R           LTP+A  L+ EEE + + 
Sbjct: 74  --HITAAAFFQKYPSVFTTFQPSPSHPLHVR-----------LTPQALTLHKEEETIHLS 133

Query: 148 QCWTDIR-SRLCRLLMLTSGTTLPLQTIDQLRWDMGLPYDYRNSFIPYNHDLFSFVQLRD 207
               ++   RL + LMLT   +LPL  +D+ R+D+GLP DY  S I    + F   +++D
Sbjct: 134 PPQRNVTVQRLTKFLMLTGAGSLPLYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTEIKD 193

Query: 208 DRVGLKLL-----SWDDDLAVSELQKNAGSQQVEEDVRNGCLAFPIGFTRGFGLRRKCMD 267
              G K L     S  ++L VSE+++   +       +   + + + F +G+ L ++  +
Sbjct: 194 RLTGEKTLALTISSRRNNLPVSEMERREATIDGSRVKKGLRIRYSMNFPKGYELHKRVKN 253

Query: 268 WLKEWQKLPYTSPYCDASHLDPRTDASEKRIVGVFHELLHLTLQKKTERKNVSNLRKPFS 327
           W+++WQ LPY SPY +A HL   +D +EK  V V HELL L + KKTE  NV  L +   
Sbjct: 254 WVEQWQNLPYISPYENAFHLGSYSDQAEKWAVAVLHELLFLLVSKKTETDNVICLGEYLG 313

Query: 328 MPQKFTKVFERHPGIFYISKKNDTQTVILREAYDGDKLLQKHPLVSIREKFANMSRKGQL 377
              +F K    HPGIFY+S K  TQTV+LREAY    LL+KHPL+ IR ++  +  K   
Sbjct: 314 FGMRFKKALVHHPGIFYMSHKIRTQTVVLREAYHKVFLLEKHPLMGIRHQYIYLMSKSGR 364

BLAST of CmoCh17G005680 vs. TAIR10
Match: AT1G71850.1 (AT1G71850.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 200.3 bits (508), Expect = 2.4e-51
Identity = 127/399 (31.83%), Postives = 212/399 (53.13%), Query Frame = 1

Query: 38  KWVKDKDLDSVVSAEKDLKAVCFLVSIISSSLEQCVPIYRLRCHRRQLGLPNDVKMSTFI 97
           K+V+D+ LD  V  EK+L+ +  +  +I S   + VPI  +   +  L +P  ++   FI
Sbjct: 30  KFVRDRGLDHAVEREKNLRPLLSIKDLIRSEPAKSVPISVITSQKDSLRVP--LRPIEFI 89

Query: 98  RRYPSIFHESHIRDSAGTPVPSFGLTPEA-RELYEEEIVVVRQCWTD-IRSRLCRLLMLT 157
           R +PS+F E  +    G   P   LTPE      +E++V   + +   +  RL +LLM+ 
Sbjct: 90  RSFPSVFQE-FLPGGIGIH-PHISLTPEILNHDADEQLVYGSETYKQGLADRLLKLLMIN 149

Query: 158 SGTTLPLQTIDQLRWDMGLPYDYRNSFIPYNHDLFSFVQ--LRDDRVGLKLLSWDDDLAV 217
               +PL+ +D L+WD+GLP DY  + +P   D F  ++  LR     L+L+ W ++ AV
Sbjct: 150 RINKIPLEILDLLKWDLGLPKDYVETMVPEFPDYFRVIKSKLRGCSGELELVCWSNEHAV 209

Query: 218 SELQKNAGSQQVEEDVRNGCLAFPIGFTRGFGLRRKCMDWLKEWQKLPYTSPYCDASHLD 277
           S L+K A + +  E  +   +AFP+ F+ GF + +K   W+ +WQKLPY SPY +A HL 
Sbjct: 210 SVLEKKARTLRKGEYTKGSAIAFPMKFSNGFVVDKKMKKWIDDWQKLPYISPYENALHLS 269

Query: 278 PRTDASEKRIVGVFHELLHLTLQKKTERKNVSNLRKPFSMPQKFTKVFERHPGIFYISKK 337
             +D S+K    V HE+++L + KK E+  + +L +   +  +F +V   HPGIFY+S K
Sbjct: 270 ATSDESDKWAAAVLHEIMNLFVSKKVEKDAILHLGEFMGLRSRFKRVLHNHPGIFYLSSK 329

Query: 338 NDTQTVILREAYDGDKLLQKHPLVSIREKFANMSRKGQLDRS--RGLYKKEDPFGHFHHD 397
             T TV+LR+ Y    L++ + LV+ R ++  +    + D        KKED  G    +
Sbjct: 330 LRTHTVVLRDGYKRGMLIESNELVTSRNRYMKLMNTVKKDNKAVSSSSKKEDK-GKVEGE 389

Query: 398 EVD-ETRYSSEEMSDYNLLSEY------DSESDDPIDNN 424
             D + +  ++++S  ++  +       D E DD +D N
Sbjct: 390 VCDTDAKAENDDISGSDVEDDRQGDFVDDDEDDDEVDQN 423

BLAST of CmoCh17G005680 vs. NCBI nr
Match: gi|659089626|ref|XP_008445613.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 765.8 bits (1976), Expect = 4.1e-218
Identity = 368/424 (86.79%), Postives = 398/424 (93.87%), Query Frame = 1

Query: 1   MVSWLFSRVKFCGFPCKNQRGSNLNHLQSRYLVNIKLKWVKDKDLDSVVSAEKDLKAVCF 60
           MV+WLFSR+K  GF CKNQ G +LN+LQ R LVNIKLKWVKDKDLD+VVSAEKDLKAVCF
Sbjct: 1   MVAWLFSRLKLFGFSCKNQTGLSLNYLQGRCLVNIKLKWVKDKDLDTVVSAEKDLKAVCF 60

Query: 61  LVSIISSSLEQCVPIYRLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHIRDSAGTPVPSF 120
           LVSIISSS E C+P+Y LRCHRRQLGLPNDVKMSTFIRRYPSIFHESHI DSAGT VPSF
Sbjct: 61  LVSIISSSPENCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120

Query: 121 GLTPEARELYEEEIVVVRQCWTDIRSRLCRLLMLTSGTTLPLQTIDQLRWDMGLPYDYRN 180
            LTPEAREL+EE+IVV+RQCWTD+RSRLCRLLMLTSG TLPLQTIDQLRWDMGLPYDY+N
Sbjct: 121 CLTPEARELHEEQIVVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180

Query: 181 SFIPYNHDLFSFVQLRDDRVGLKLLSWDDDLAVSELQKNAGSQQVEEDVRNGCLAFPIGF 240
           SF+PYNHDLFSF++L+DDR+GLKLL WD+DLAVSELQKNA SQQ+EED+RNG LAFPIGF
Sbjct: 181 SFVPYNHDLFSFIRLQDDRIGLKLLLWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240

Query: 241 TRGFGLRRKCMDWLKEWQKLPYTSPYCDASHLDPRTDASEKRIVGVFHELLHLTLQKKTE 300
           TRGFGL RKCMDWLK+WQKLPYTSPYCDASHLDPRTD SEKRIVGVFHELLHLTLQKKTE
Sbjct: 241 TRGFGLNRKCMDWLKDWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300

Query: 301 RKNVSNLRKPFSMPQKFTKVFERHPGIFYISKKNDTQTVILREAYDGDKLLQKHPLVSIR 360
           RKNVSNLRKPFS+PQKFTKVFERHPGIFYISKK+DTQTVILREAYDGDKLLQKHPLVSIR
Sbjct: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR 360

Query: 361 EKFANMSRKGQLDRSRGLYKKEDPFGHFHHDEVDETRYSSEEMSDYNLLSEYDSESDDPI 420
           E+F +M RKGQLDRSRGLYKK DP GH +HDEV+ETRYSSEE+SD+N+LSEYDSESD  I
Sbjct: 361 ERFTSMLRKGQLDRSRGLYKK-DPSGHVYHDEVNETRYSSEEVSDHNMLSEYDSESDGLI 420

Query: 421 DNNC 425
           DNNC
Sbjct: 421 DNNC 423

BLAST of CmoCh17G005680 vs. NCBI nr
Match: gi|449441530|ref|XP_004138535.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus])

HSP 1 Score: 756.5 bits (1952), Expect = 2.5e-215
Identity = 363/424 (85.61%), Postives = 395/424 (93.16%), Query Frame = 1

Query: 1   MVSWLFSRVKFCGFPCKNQRGSNLNHLQSRYLVNIKLKWVKDKDLDSVVSAEKDLKAVCF 60
           MV+WLFSR+K  GF CKNQRG NLN+LQ RYLVNI+LKWVKDKDLD+VVSAEKDLKAVCF
Sbjct: 1   MVAWLFSRLKLSGFLCKNQRGLNLNYLQGRYLVNIRLKWVKDKDLDTVVSAEKDLKAVCF 60

Query: 61  LVSIISSSLEQCVPIYRLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHIRDSAGTPVPSF 120
           LVSIISSS E C+P+Y LR HRRQLG+PNDVKMSTFIRRYPSIFHESHI DSAGT VPSF
Sbjct: 61  LVSIISSSPEHCLPVYHLRRHRRQLGIPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120

Query: 121 GLTPEARELYEEEIVVVRQCWTDIRSRLCRLLMLTSGTTLPLQTIDQLRWDMGLPYDYRN 180
            LTPEAREL+ E+I+V+RQCWTD+RSRLCRLLMLTSG TLPLQTIDQLRWDMGLPYDY+N
Sbjct: 121 CLTPEARELHAEQIIVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180

Query: 181 SFIPYNHDLFSFVQLRDDRVGLKLLSWDDDLAVSELQKNAGSQQVEEDVRNGCLAFPIGF 240
           SFIPYNHD+FSF++L+D R+GLKLL WD+DLAVSELQKNA SQQ+EED+RNG LAFPIGF
Sbjct: 181 SFIPYNHDMFSFIRLQDHRIGLKLLKWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240

Query: 241 TRGFGLRRKCMDWLKEWQKLPYTSPYCDASHLDPRTDASEKRIVGVFHELLHLTLQKKTE 300
           TRGFGL RKCMDWLKEWQ LPYTSPYCDASHLDPRTD SEKRIVGVFHELLHLTLQKKTE
Sbjct: 241 TRGFGLNRKCMDWLKEWQTLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300

Query: 301 RKNVSNLRKPFSMPQKFTKVFERHPGIFYISKKNDTQTVILREAYDGDKLLQKHPLVSIR 360
           RKNVSNLRKPFS+PQKFTKVFERHPGIFYISKK+DTQTVILREAYDGDKL+QKHPLVSIR
Sbjct: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLVQKHPLVSIR 360

Query: 361 EKFANMSRKGQLDRSRGLYKKEDPFGHFHHDEVDETRYSSEEMSDYNLLSEYDSESDDPI 420
           E+F +M RKGQLDRSRGLYKK DP GHFH+DEV+ET YSSEE+SD+N+L EYDSESD  I
Sbjct: 361 ERFTSMLRKGQLDRSRGLYKK-DPSGHFHNDEVNETLYSSEEVSDHNMLLEYDSESDGLI 420

Query: 421 DNNC 425
           DNNC
Sbjct: 421 DNNC 423

BLAST of CmoCh17G005680 vs. NCBI nr
Match: gi|470121303|ref|XP_004296715.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 565.1 bits (1455), Expect = 1.1e-157
Identity = 283/413 (68.52%), Postives = 331/413 (80.15%), Query Frame = 1

Query: 20  RGSNL-NHLQSRYLVNIKLKWVKDKDLDSVVSAEKDLKAVCFLVSIISSSLEQCVPIYRL 79
           RG+ + NH Q R LVN+KLKWVKD+ LD+VV+AE+DLKA C LVSIISSS   C+PIY L
Sbjct: 16  RGTQVFNHKQKRNLVNVKLKWVKDRALDAVVTAERDLKAACVLVSIISSSSHGCLPIYHL 75

Query: 80  RCHRRQLGLPNDVKMSTFIRRYPSIFHESHIRDSAGTPVPSFGLTPEARELYEEEIVVVR 139
            CHR QL LP ++K+STFIRRYPS+F ESH+ DS GT VP F LTPEA +L++EE  +V+
Sbjct: 76  SCHRGQLNLPYELKVSTFIRRYPSVFLESHVHDSGGTRVPCFSLTPEAIKLHQEESNLVQ 135

Query: 140 QCWTDIRSRLCRLLMLTSGTTLPLQTIDQLRWDMGLPYDYRNSFIPYNHDLFSFVQLRDD 199
           Q   DI +RL +LLMLT G  LPLQTIDQL+WD+GLPYDY++S IP++ DLFSF+ L DD
Sbjct: 136 QNQIDILNRLRKLLMLTRGWKLPLQTIDQLKWDIGLPYDYQHSVIPHHPDLFSFISLPDD 195

Query: 200 RVGLKLLSWDDDLAVSELQKNAGSQQVEEDVRNGCLAFPIGFTRGFGLRRKCMDWLKEWQ 259
           RVGLKLLSWDDDLAVS+LQKN+  QQ +ED+RNGCLAFPIGFTRGFGL+RKCM+WLKEWQ
Sbjct: 196 RVGLKLLSWDDDLAVSQLQKNSAIQQEKEDMRNGCLAFPIGFTRGFGLKRKCMEWLKEWQ 255

Query: 260 KLPYTSPYCDASHLDPRTDASEKRIVGVFHELLHLTLQKKTERKNVSNLRKPFSMPQKFT 319
            LPY SPY D SH+DPRTD SEKR+VGVFHELLHLT+QKKTERKNVSNLRKP ++PQKFT
Sbjct: 256 SLPYNSPYYDTSHIDPRTDESEKRVVGVFHELLHLTIQKKTERKNVSNLRKPLALPQKFT 315

Query: 320 KVFERHPGIFYISKKNDTQTVILREAYDGDKLLQKHPLVSIREKFANMSRKGQLDRSRGL 379
           KVFERHPGIFYISKK DTQTVILREAYD  +LLQKHP   +REKFA + RKG LDRS GL
Sbjct: 316 KVFERHPGIFYISKKCDTQTVILREAYDHQQLLQKHPTAELREKFAMLLRKGLLDRSNGL 375

Query: 380 YKKE-------DPFGHFHHDEVDETRYSSEEMSDYNLLSEYDSESDDPIDNNC 425
           YKK        DP  H   D + + R S +E S+ +LLSEY+S   D + N C
Sbjct: 376 YKKSPGDVSEVDPLKHNIVDNISDYRSSFKEDSENDLLSEYES---DELHNPC 425

BLAST of CmoCh17G005680 vs. NCBI nr
Match: gi|645231844|ref|XP_008222589.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Prunus mume])

HSP 1 Score: 554.3 bits (1427), Expect = 1.9e-154
Identity = 280/418 (66.99%), Postives = 330/418 (78.95%), Query Frame = 1

Query: 4   WLFSRVKFCGFPCKNQRGSNLNHLQSRYLVNIKLKWVKDKDLDSVVSAEKDLKAVCFLVS 63
           +LF +V   GF    Q G N  H   R LVN+KLKWVKD+ LD+VV+A +DLKA C LVS
Sbjct: 5   FLFVKVGGFGFFRGCQHGFNYQH--KRGLVNVKLKWVKDRGLDAVVTAARDLKAACILVS 64

Query: 64  IISSSLEQCVPIYRLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHIRDSAGTPVPSFGLT 123
           IISSS + C+PIYRL CHR QL LP D+K+STFIR++PS+F ESH   S G  VP F LT
Sbjct: 65  IISSSPQCCLPIYRLSCHRGQLSLPCDLKLSTFIRKFPSVFVESHTFWSGGARVPCFSLT 124

Query: 124 PEARELYEEEIVVVRQCWTDIRSRLCRLLMLTSGTTLPLQTIDQLRWDMGLPYDYRNSFI 183
           PEA +LY EE+ V++Q   D+ +RL +LLMLT G TLPLQT+DQL+WD+GLPYDY++S I
Sbjct: 125 PEALQLYHEELNVLQQNQVDLINRLQKLLMLTQGWTLPLQTLDQLKWDLGLPYDYQHSVI 184

Query: 184 PYNHDLFSFVQLRDDRVGLKLLSWDDDLAVSELQKNAGSQQVEEDVRNGCLAFPIGFTRG 243
           P++ DLFSF++L DDRVGLKLLSWD+DLAVS+LQKN+  QQ EED R+GCLAFP+GFTRG
Sbjct: 185 PHHPDLFSFIRLPDDRVGLKLLSWDEDLAVSQLQKNSAIQQKEEDARSGCLAFPVGFTRG 244

Query: 244 FGLRRKCMDWLKEWQKLPYTSPYCDASHLDPRTDASEKRIVGVFHELLHLTLQKKTERKN 303
           FGL+RKCM+WLKEWQ LPYTSPY DASHLDPRTD SEKRIVGVFHELL LT+ KKTERKN
Sbjct: 245 FGLKRKCMEWLKEWQTLPYTSPYSDASHLDPRTDVSEKRIVGVFHELLQLTIHKKTERKN 304

Query: 304 VSNLRKPFSMPQKFTKVFERHPGIFYISKKNDTQTVILREAYDGDKLLQKHPLVSIREKF 363
           VSNLRKP ++PQKFTKVFERHPGIFYISKK  TQTVILREAY+  +LLQKHP V +RE+F
Sbjct: 305 VSNLRKPLALPQKFTKVFERHPGIFYISKKCATQTVILREAYNHQQLLQKHPTVDLRERF 364

Query: 364 ANMSRKGQLDRSRGLYKKEDPFG---HFHHDEVDETRYSSEEMSDYNLLSEYDSESDD 419
           A + RKG LDRS+GLYKK    G     H D++   + SSEE S  NL  EYDS+  D
Sbjct: 365 ARLLRKGLLDRSKGLYKKSKGDGVEVDPHVDDIGNNQSSSEEESVNNLFYEYDSDKPD 420

BLAST of CmoCh17G005680 vs. NCBI nr
Match: gi|596141224|ref|XP_007222436.1| (hypothetical protein PRUPE_ppa006119mg [Prunus persica])

HSP 1 Score: 553.1 bits (1424), Expect = 4.1e-154
Identity = 277/418 (66.27%), Postives = 327/418 (78.23%), Query Frame = 1

Query: 4   WLFSRVKFCGFPCKNQRGSNLNHLQSRYLVNIKLKWVKDKDLDSVVSAEKDLKAVCFLVS 63
           W F  VK  GF          N+   R LVN+KLKWVKD+ LD+VV+AE+DLKA C LVS
Sbjct: 3   WFFLFVKVGGFGFLRGCQHGFNYQHKRGLVNVKLKWVKDRGLDAVVTAERDLKAACILVS 62

Query: 64  IISSSLEQCVPIYRLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHIRDSAGTPVPSFGLT 123
           IISSS + C+PIYRL CHR QL LP D+K+STFIR++PS+F ESH   S G  VP F LT
Sbjct: 63  IISSSPQCCLPIYRLSCHRGQLSLPCDLKLSTFIRKFPSVFVESHTFWSGGARVPCFSLT 122

Query: 124 PEARELYEEEIVVVRQCWTDIRSRLCRLLMLTSGTTLPLQTIDQLRWDMGLPYDYRNSFI 183
           PEA +LY EE+ V++Q   D+ +RL +LLMLT G TLPLQT+DQL+WD+GLPYDY++S I
Sbjct: 123 PEALQLYHEELNVLQQNQMDLINRLQKLLMLTQGWTLPLQTLDQLKWDLGLPYDYQHSVI 182

Query: 184 PYNHDLFSFVQLRDDRVGLKLLSWDDDLAVSELQKNAGSQQVEEDVRNGCLAFPIGFTRG 243
           P++ DLFSF++L DDRVGLKLLSWD+DLAVS+LQKN+  QQ EED R+GCLAFP+GFTRG
Sbjct: 183 PHHPDLFSFIRLPDDRVGLKLLSWDEDLAVSQLQKNSAIQQKEEDARSGCLAFPVGFTRG 242

Query: 244 FGLRRKCMDWLKEWQKLPYTSPYCDASHLDPRTDASEKRIVGVFHELLHLTLQKKTERKN 303
           FGL+RKCM+WLKEWQ LPYTSPY DAS+LDPRTD SEKRIVGVFHELL LT+ KKTERKN
Sbjct: 243 FGLKRKCMEWLKEWQTLPYTSPYSDASYLDPRTDVSEKRIVGVFHELLQLTIHKKTERKN 302

Query: 304 VSNLRKPFSMPQKFTKVFERHPGIFYISKKNDTQTVILREAYDGDKLLQKHPLVSIREKF 363
           VSNLRKP ++PQKFTKVFERHPGIFYISKK  TQTVILREAY+  +LLQKHP V +RE+F
Sbjct: 303 VSNLRKPLALPQKFTKVFERHPGIFYISKKCATQTVILREAYNHQQLLQKHPTVDLRERF 362

Query: 364 ANMSRKGQLDRSRGLYKKEDPFG---HFHHDEVDETRYSSEEMSDYNLLSEYDSESDD 419
           A + RKG LDRS+GLYKK    G     H D++   + SSEE S   L  EYDS+  D
Sbjct: 363 ARLLRKGLLDRSKGLYKKSKGDGVEVDPHVDDIGNNQSSSEEESVNKLFYEYDSDKPD 420

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RPD1_ARATH2.5e-2626.80Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KAR1_CUCSA1.7e-21585.61Uncharacterized protein OS=Cucumis sativus GN=Csa_6G022360 PE=4 SV=1[more]
M5XWR3_PRUPE2.9e-15466.27Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006119mg PE=4 SV=1[more]
W9QX20_9ROSA1.9e-15367.39Uncharacterized protein OS=Morus notabilis GN=L484_009881 PE=4 SV=1[more]
F6I4B7_VITVI1.5e-15065.48Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0062g01420 PE=4 SV=... [more]
A0A0D2PS09_GOSRA1.6e-14965.07Uncharacterized protein OS=Gossypium raimondii GN=B456_005G127200 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G48040.16.8e-13159.81 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT3G58520.16.1e-7139.04 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT2G39120.11.4e-5937.47 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT4G24320.12.0e-5335.44 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT1G71850.12.4e-5131.83 Ubiquitin carboxyl-terminal hydrolase family protein[more]
Match NameE-valueIdentityDescription
gi|659089626|ref|XP_008445613.1|4.1e-21886.79PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo][more]
gi|449441530|ref|XP_004138535.1|2.5e-21585.61PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus][more]
gi|470121303|ref|XP_004296715.1|1.1e-15768.52PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Fragaria vesca subsp. vesca][more]
gi|645231844|ref|XP_008222589.1|1.9e-15466.99PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Prunus mume][more]
gi|596141224|ref|XP_007222436.1|4.1e-15466.27hypothetical protein PRUPE_ppa006119mg [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021099PORR_domain
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh17G005680.1CmoCh17G005680.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 40..370
score: 7.5E
NoneNo IPR availablePANTHERPTHR31476FAMILY NOT NAMEDcoord: 1..418
score: 3.1E

The following gene(s) are paralogous to this gene:

None