Cla007187 (gene) Watermelon (97103) v1

Overview
NameCla007187
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionA_IG002N01.30 protein (Fragment) (AHRD V1 **-- O04624_ARATH); contains Interpro domain(s) IPR001578 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1
LocationChr8 : 7590062 .. 7591336 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGACTTGGTTGTTTAGCAGGGTTAAACTCTTTGGTTTCCCATGTAAAAATCAGAGAGGATTGAATTTAAATTACCTGCAAGGTCGTTATCTGGTAAACATAAAACTGAAATGGGTGAAAGATAAATACTTAGACACTGTAGTGAGTGCTGAGAAGGACCTCAGGGCTGTTTGCTTTCTTGTGTCCATAATCTCTTCAAGTCCTGAACATTGCTTACCGGTCTACCATCTGCGTTGCCATCGTCGGCAGCTTGGTCTTCCAAATGATGTCAAGATGTCTACCTTCATTAGGAGATACCCTTCTATCTTTCATGAGTCACATATTCTTGACAGCGGAGGCACTCGTGTGCCATCTTTTTGCTTAACTCCAGAAGCTAGGGAACTTCATGAGGAGGAAATCATTGTCCTTCGGCAGTGTTGGACGGATCTTCGATCTAGGCTTTGCAGATTGCTAATGCTTACCAGTGATTCAACACTTCCTTTACAGACAATTGACCAGTTGAGATGGGACATGGGGCTGCCATATGATTATCAGAACTCTTTCATTCCATATAACCATGACTTGTTTTCATTCGTCCATCTCCGAGATGATCGCATTGGGTTGAAACTTCTTTCCTGGGATAATGATCTTGCTGTTTCTGAACTGCAGAAGAATGCTGCTTCCCAACAGATGGAAGAAGACATAAGAAATGGCTGTTTGGCCTTTCCAATTGGATTCACAAGGGGTTTTGGACTCAGGAGAAAATGTATGGATTGGTTAAAGGAATGGCAGAAGCTCCCTTACACTTCTCCATATTGTGATGCCTCCCATTTGGATCCCCGTACTGATGTATCTGAAAAGAGGATTGTCGGAGTCTTTCATGAGCTTCTTCACCTTACCTTGCAAAAGAAAACCGAACGAAAGAATGTAAGCAACCTGCGCAAACCATTCTCTATGCCTCAGAAGTTCACAAAAGTGTTCGAGCGCCATCCTGGTATCTTTTACATCTCTAAGAAGGACGACACGCAGACTGTAATCCTTCGAGAAGCATATGATGGTGACAAGCTTCTGCAGAAGCACCCTCTTGTTAGCATCAGGGAAAGATTTACAAGCATGTTGAGGAAAGGCCAACTAGATAGAAGCAGAGGTTTGTACAAAAAAGAAAATCCATTCGGTCACTTTCATCATCATGAATTGGATGAAACTCGATATAGTTCCGAAGAAGTGTCCGACTATAATTTGCTTTCAGAATATGATTCGGAATCAGATGGCCTGATTGACAACAACTGCTGA

mRNA sequence

ATGGTGACTTGGTTGTTTAGCAGGGTTAAACTCTTTGGTTTCCCATGTAAAAATCAGAGAGGATTGAATTTAAATTACCTGCAAGGTCGTTATCTGGTAAACATAAAACTGAAATGGGTGAAAGATAAATACTTAGACACTGTAGTGAGTGCTGAGAAGGACCTCAGGGCTGTTTGCTTTCTTGTGTCCATAATCTCTTCAAGTCCTGAACATTGCTTACCGGTCTACCATCTGCGTTGCCATCGTCGGCAGCTTGGTCTTCCAAATGATGTCAAGATGTCTACCTTCATTAGGAGATACCCTTCTATCTTTCATGAGTCACATATTCTTGACAGCGGAGGCACTCGTGTGCCATCTTTTTGCTTAACTCCAGAAGCTAGGGAACTTCATGAGGAGGAAATCATTGTCCTTCGGCAGTGTTGGACGGATCTTCGATCTAGGCTTTGCAGATTGCTAATGCTTACCAGTGATTCAACACTTCCTTTACAGACAATTGACCAGTTGAGATGGGACATGGGGCTGCCATATGATTATCAGAACTCTTTCATTCCATATAACCATGACTTGTTTTCATTCGTCCATCTCCGAGATGATCGCATTGGGTTGAAACTTCTTTCCTGGGATAATGATCTTGCTGTTTCTGAACTGCAGAAGAATGCTGCTTCCCAACAGATGGAAGAAGACATAAGAAATGGCTGTTTGGCCTTTCCAATTGGATTCACAAGGGGTTTTGGACTCAGGAGAAAATGTATGGATTGGTTAAAGGAATGGCAGAAGCTCCCTTACACTTCTCCATATTGTGATGCCTCCCATTTGGATCCCCGTACTGATGTATCTGAAAAGAGGATTGTCGGAGTCTTTCATGAGCTTCTTCACCTTACCTTGCAAAAGAAAACCGAACGAAAGAATGTAAGCAACCTGCGCAAACCATTCTCTATGCCTCAGAAGTTCACAAAAGTGTTCGAGCGCCATCCTGGTATCTTTTACATCTCTAAGAAGGACGACACGCAGACTGTAATCCTTCGAGAAGCATATGATGGTGACAAGCTTCTGCAGAAGCACCCTCTTGTTAGCATCAGGGAAAGATTTACAAGCATGTTGAGGAAAGGCCAACTAGATAGAAGCAGAGGTTTGTACAAAAAAGAAAATCCATTCGGTCACTTTCATCATCATGAATTGGATGAAACTCGATATAGTTCCGAAGAAGTGTCCGACTATAATTTGCTTTCAGAATATGATTCGGAATCAGATGGCCTGATTGACAACAACTGCTGA

Coding sequence (CDS)

ATGGTGACTTGGTTGTTTAGCAGGGTTAAACTCTTTGGTTTCCCATGTAAAAATCAGAGAGGATTGAATTTAAATTACCTGCAAGGTCGTTATCTGGTAAACATAAAACTGAAATGGGTGAAAGATAAATACTTAGACACTGTAGTGAGTGCTGAGAAGGACCTCAGGGCTGTTTGCTTTCTTGTGTCCATAATCTCTTCAAGTCCTGAACATTGCTTACCGGTCTACCATCTGCGTTGCCATCGTCGGCAGCTTGGTCTTCCAAATGATGTCAAGATGTCTACCTTCATTAGGAGATACCCTTCTATCTTTCATGAGTCACATATTCTTGACAGCGGAGGCACTCGTGTGCCATCTTTTTGCTTAACTCCAGAAGCTAGGGAACTTCATGAGGAGGAAATCATTGTCCTTCGGCAGTGTTGGACGGATCTTCGATCTAGGCTTTGCAGATTGCTAATGCTTACCAGTGATTCAACACTTCCTTTACAGACAATTGACCAGTTGAGATGGGACATGGGGCTGCCATATGATTATCAGAACTCTTTCATTCCATATAACCATGACTTGTTTTCATTCGTCCATCTCCGAGATGATCGCATTGGGTTGAAACTTCTTTCCTGGGATAATGATCTTGCTGTTTCTGAACTGCAGAAGAATGCTGCTTCCCAACAGATGGAAGAAGACATAAGAAATGGCTGTTTGGCCTTTCCAATTGGATTCACAAGGGGTTTTGGACTCAGGAGAAAATGTATGGATTGGTTAAAGGAATGGCAGAAGCTCCCTTACACTTCTCCATATTGTGATGCCTCCCATTTGGATCCCCGTACTGATGTATCTGAAAAGAGGATTGTCGGAGTCTTTCATGAGCTTCTTCACCTTACCTTGCAAAAGAAAACCGAACGAAAGAATGTAAGCAACCTGCGCAAACCATTCTCTATGCCTCAGAAGTTCACAAAAGTGTTCGAGCGCCATCCTGGTATCTTTTACATCTCTAAGAAGGACGACACGCAGACTGTAATCCTTCGAGAAGCATATGATGGTGACAAGCTTCTGCAGAAGCACCCTCTTGTTAGCATCAGGGAAAGATTTACAAGCATGTTGAGGAAAGGCCAACTAGATAGAAGCAGAGGTTTGTACAAAAAAGAAAATCCATTCGGTCACTTTCATCATCATGAATTGGATGAAACTCGATATAGTTCCGAAGAAGTGTCCGACTATAATTTGCTTTCAGAATATGATTCGGAATCAGATGGCCTGATTGACAACAACTGCTGA

Protein sequence

MVTWLFSRVKLFGFPCKNQRGLNLNYLQGRYLVNIKLKWVKDKYLDTVVSAEKDLRAVCFLVSIISSSPEHCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSGGTRVPSFCLTPEARELHEEEIIVLRQCWTDLRSRLCRLLMLTSDSTLPLQTIDQLRWDMGLPYDYQNSFIPYNHDLFSFVHLRDDRIGLKLLSWDNDLAVSELQKNAASQQMEEDIRNGCLAFPIGFTRGFGLRRKCMDWLKEWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTERKNVSNLRKPFSMPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIRERFTSMLRKGQLDRSRGLYKKENPFGHFHHHELDETRYSSEEVSDYNLLSEYDSESDGLIDNNC
Homology
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BLAST of Cla007187 vs. Swiss-Prot
Match: RPD1_ARATH (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.1e-26
Identity = 100/360 (27.78%), Postives = 174/360 (48.33%), Query Frame = 1 

Query: 40  VKDKYLDTVVSAEKDLRAVCFLVSIISSSPEHCLPVYHLRCHRRQLGLP-NDVKMSTFIR 99
           V+D   D  +  EK +R V    S+I S P H + +  L    R+LGL     +   F+ 
Sbjct: 47  VRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLL 106

Query: 100 RYPSIFHESHILDSGGTRVPSFCLTPEARE-LHEEEIIVLRQCWTDLRSRLCRLLMLTSD 159
           ++P +F    I +    R+    LT +A + +  E   VL Q   D  +RL +L+M+++ 
Sbjct: 107 KFPHVFE---IYEHPVQRILYCRLTRKALDQIRHEHEAVLDQI-PDAVTRLRKLVMMSNT 166

Query: 160 STLPLQTIDQLRWDMGLPYDYQNSFIPYNHDLFSFVHLRDDRIG-LKLLSWDNDLAVSEL 219
             + L+ +   R + GLP D++ S I  +   F  +   + R   ++++  D +L++  +
Sbjct: 167 GRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPNLSICAI 226

Query: 220 QKNAASQQME-----EDIRNGCLAFPIGFTRGFGLRRKCMDWLKEWQKLPYTSPYCDASH 279
           ++    +        ED+R    +F + F  GF + +     + +WQ+LPY SPY D S 
Sbjct: 227 ERVREIEYRTKGIDAEDVR---FSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDISG 286

Query: 280 LDPRTDVS----EKRIVGVFHELLHLTLQKKTERKNVSNLRKPFSMPQKFTKVFERHPGI 339
            D R+  +    EKR V   HELL LT++KK   + +++ R   ++P+K  +   +H GI
Sbjct: 287 YDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQGI 346

Query: 340 FYISKKDD---TQTVILREAYDGDKLLQKHPLVSIRERFTSML----RKGQLDRSRGLYK 381
           FYIS + +     TV LRE Y   +L++ + +   R R   ++    RK ++D     Y+
Sbjct: 347 FYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAKVDAELVRYR 399

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BLAST of Cla007187 vs. TrEMBL
Match: A0A0A0KAR1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G022360 PE=4 SV=1)

HSP 1 Score: 799.7 bits (2064), Expect = 1.8e-228
Identity = 388/424 (91.51%), Postives = 404/424 (95.28%), Query Frame = 1 

Query: 1   MVTWLFSRVKLFGFPCKNQRGLNLNYLQGRYLVNIKLKWVKDKYLDTVVSAEKDLRAVCF 60
           MV WLFSR+KL GF CKNQRGLNLNYLQGRYLVNI+LKWVKDK LDTVVSAEKDL+AVCF
Sbjct: 1   MVAWLFSRLKLSGFLCKNQRGLNLNYLQGRYLVNIRLKWVKDKDLDTVVSAEKDLKAVCF 60

Query: 61  LVSIISSSPEHCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSGGTRVPSF 120
           LVSIISSSPEHCLPVYHLR HRRQLG+PNDVKMSTFIRRYPSIFHESHILDS GTRVPSF
Sbjct: 61  LVSIISSSPEHCLPVYHLRRHRRQLGIPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120

Query: 121 CLTPEARELHEEEIIVLRQCWTDLRSRLCRLLMLTSDSTLPLQTIDQLRWDMGLPYDYQN 180
           CLTPEARELH E+IIVLRQCWTDLRSRLCRLLMLTS  TLPLQTIDQLRWDMGLPYDYQN
Sbjct: 121 CLTPEARELHAEQIIVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180

Query: 181 SFIPYNHDLFSFVHLRDDRIGLKLLSWDNDLAVSELQKNAASQQMEEDIRNGCLAFPIGF 240
           SFIPYNHD+FSF+ L+D RIGLKLL WDNDLAVSELQKNAASQQMEEDIRNG LAFPIGF
Sbjct: 181 SFIPYNHDMFSFIRLQDHRIGLKLLKWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240

Query: 241 TRGFGLRRKCMDWLKEWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300
           TRGFGL RKCMDWLKEWQ LPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE
Sbjct: 241 TRGFGLNRKCMDWLKEWQTLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300

Query: 301 RKNVSNLRKPFSMPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR 360
           RKNVSNLRKPFS+PQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKL+QKHPLVSIR
Sbjct: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLVQKHPLVSIR 360

Query: 361 ERFTSMLRKGQLDRSRGLYKKENPFGHFHHHELDETRYSSEEVSDYNLLSEYDSESDGLI 420
           ERFTSMLRKGQLDRSRGLYKK+ P GHFH+ E++ET YSSEEVSD+N+L EYDSESDGLI
Sbjct: 361 ERFTSMLRKGQLDRSRGLYKKD-PSGHFHNDEVNETLYSSEEVSDHNMLLEYDSESDGLI 420

Query: 421 DNNC 425
           DNNC
Sbjct: 421 DNNC 423

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BLAST of Cla007187 vs. TrEMBL
Match: W9QX20_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009881 PE=4 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 5.2e-156
Identity = 282/414 (68.12%), Postives = 328/414 (79.23%), Query Frame = 1 

Query: 1   MVTW-LFSRVKLFGFPCKNQRGLNLNYLQGRYLVNIKLKWVKDKYLDTVVSAEKDLRAVC 60
           M  W LF +V+  GF CK+Q G +  Y Q   LVN+KLKWVKDK LD  V  EKDL+A C
Sbjct: 1   MARWFLFGKVESSGFLCKSQSGFS--YQQKCSLVNVKLKWVKDKALDAAVIVEKDLKAAC 60

Query: 61  FLVSIISSSPEHCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSGGTRVPS 120
            L +IISS+P+  LP+YHL CHR QLGLP D+K+STFIRRYPS+F ESH LD+GGTRVP 
Sbjct: 61  TLATIISSTPQRRLPIYHLSCHRGQLGLPKDLKLSTFIRRYPSVFLESHFLDTGGTRVPC 120

Query: 121 FCLTPEARELHEEEIIVLRQCWTDLRSRLCRLLMLTSDSTLPLQTIDQLRWDMGLPYDYQ 180
           F LT EA ELHEEE+ ++ Q   DL +RL +LLMLT D TLPLQTIDQL+WD GLPYDYQ
Sbjct: 121 FGLTHEAVELHEEELHLVEQNEMDLLNRLRKLLMLTRDWTLPLQTIDQLKWDFGLPYDYQ 180

Query: 181 NSFIPYNHDLFSFVHLRDDRIGLKLLSWDNDLAVSELQKNAASQQMEEDIRNGCLAFPIG 240
           +SFIP + DL SFV L D R+GLKL  WD+D AVSEL KN+ASQ  ++D +N CLAFPIG
Sbjct: 181 HSFIPRHPDLLSFVQLPDKRVGLKLNIWDDDHAVSELLKNSASQPKQQDTKNDCLAFPIG 240

Query: 241 FTRGFGLRRKCMDWLKEWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKT 300
           FTRGFGL+RKCM+WLKEWQ+LPYTSPY +AS+LDPRTDVSEKRIVGVFHELLHLT+QKKT
Sbjct: 241 FTRGFGLKRKCMEWLKEWQRLPYTSPYSEASYLDPRTDVSEKRIVGVFHELLHLTIQKKT 300

Query: 301 ERKNVSNLRKPFSMPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSI 360
           ERKNVSNLRKP ++PQKFTKVFERHPGIFYISKK DTQTVILREAYDG  LLQ+H L  I
Sbjct: 301 ERKNVSNLRKPLALPQKFTKVFERHPGIFYISKKCDTQTVILREAYDGQNLLQRHSLSEI 360

Query: 361 RERFTSMLRKGQLDRSRGLYKK-------ENPFGHFHHHELDETRYSSEEVSDY 407
           RE+F  MLR+G LD+S+GLYKK       E+P  +  H E+D +  SSEE  +Y
Sbjct: 361 REKFARMLREGLLDKSKGLYKKTRRDDMVEDPLKYECHFEVDSSESSSEEEFEY 412

[Close]
BLAST of Cla007187 vs. TrEMBL
Match: M5XWR3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006119mg PE=4 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 2.0e-155
Identity = 280/417 (67.15%), Postives = 327/417 (78.42%), Query Frame = 1 

Query: 2   VTWLFSRVKLFGFPCKNQRGLNLNYLQGRYLVNIKLKWVKDKYLDTVVSAEKDLRAVCFL 61
           + W F  VK+ GF          NY   R LVN+KLKWVKD+ LD VV+AE+DL+A C L
Sbjct: 1   MVWFFLFVKVGGFGFLRGCQHGFNYQHKRGLVNVKLKWVKDRGLDAVVTAERDLKAACIL 60

Query: 62  VSIISSSPEHCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSGGTRVPSFC 121
           VSIISSSP+ CLP+Y L CHR QL LP D+K+STFIR++PS+F ESH   SGG RVP F 
Sbjct: 61  VSIISSSPQCCLPIYRLSCHRGQLSLPCDLKLSTFIRKFPSVFVESHTFWSGGARVPCFS 120

Query: 122 LTPEARELHEEEIIVLRQCWTDLRSRLCRLLMLTSDSTLPLQTIDQLRWDMGLPYDYQNS 181
           LTPEA +L+ EE+ VL+Q   DL +RL +LLMLT   TLPLQT+DQL+WD+GLPYDYQ+S
Sbjct: 121 LTPEALQLYHEELNVLQQNQMDLINRLQKLLMLTQGWTLPLQTLDQLKWDLGLPYDYQHS 180

Query: 182 FIPYNHDLFSFVHLRDDRIGLKLLSWDNDLAVSELQKNAASQQMEEDIRNGCLAFPIGFT 241
            IP++ DLFSF+ L DDR+GLKLLSWD DLAVS+LQKN+A QQ EED R+GCLAFP+GFT
Sbjct: 181 VIPHHPDLFSFIRLPDDRVGLKLLSWDEDLAVSQLQKNSAIQQKEEDARSGCLAFPVGFT 240

Query: 242 RGFGLRRKCMDWLKEWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTER 301
           RGFGL+RKCM+WLKEWQ LPYTSPY DAS+LDPRTDVSEKRIVGVFHELL LT+ KKTER
Sbjct: 241 RGFGLKRKCMEWLKEWQTLPYTSPYSDASYLDPRTDVSEKRIVGVFHELLQLTIHKKTER 300

Query: 302 KNVSNLRKPFSMPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIRE 361
           KNVSNLRKP ++PQKFTKVFERHPGIFYISKK  TQTVILREAY+  +LLQKHP V +RE
Sbjct: 301 KNVSNLRKPLALPQKFTKVFERHPGIFYISKKCATQTVILREAYNHQQLLQKHPTVDLRE 360

Query: 362 RFTSMLRKGQLDRSRGLYKKENPFG---HFHHHELDETRYSSEEVSDYNLLSEYDSE 416
           RF  +LRKG LDRS+GLYKK    G     H  ++   + SSEE S   L  EYDS+
Sbjct: 361 RFARLLRKGLLDRSKGLYKKSKGDGVEVDPHVDDIGNNQSSSEEESVNKLFYEYDSD 417

[Close]
BLAST of Cla007187 vs. TrEMBL
Match: F6I4B7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0062g01420 PE=4 SV=1)

HSP 1 Score: 554.3 bits (1427), Expect = 1.3e-154
Identity = 282/423 (66.67%), Postives = 327/423 (77.30%), Query Frame = 1 

Query: 1   MVTWLF-SRVKLFGFPCKNQRGLNLNYLQGRYLVNIKLKWVKDKYLDTVVSAEKDLRAVC 60
           MV WL   R  + GF   +QRG    Y Q   LVN+KLKWVKD+ LD VV+ E++LRA C
Sbjct: 1   MVWWLLLGRAGVSGFLYVHQRGFI--YQQKFSLVNVKLKWVKDRALDAVVAGERNLRATC 60

Query: 61  FLVSIISSSPEHCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSGGTRVPS 120
            LVSIISS P    P+Y L  HR QLGLP+D+K++TFIRR+P+IF E H+LDSGGTRVP 
Sbjct: 61  TLVSIISSDPHDGFPIYRLSRHRGQLGLPHDIKLATFIRRFPNIFDEFHVLDSGGTRVPW 120

Query: 121 FCLTPEARELHEEEIIVLRQCWTDLRSRLCRLLMLTSDSTLPLQTIDQLRWDMGLPYDYQ 180
           F LTPEA  LH E +  L+Q   DL +RL +LLMLT +  LPLQTIDQL+WD GLPYDY 
Sbjct: 121 FRLTPEALNLHHEALNALQQNEMDLLNRLRKLLMLTCERMLPLQTIDQLKWDFGLPYDYC 180

Query: 181 NSFIPYNHDLFSFVHLRDDRIGLKLLSWDNDLAVSELQKNAASQQMEEDIRNGCLAFPIG 240
           +S +P   +LFS VHL DDR+GLKL+SWD+ LAVS+LQKNAA  Q EED+RNGCL FPI 
Sbjct: 181 HSLVPSYPELFSMVHLPDDRVGLKLISWDDRLAVSQLQKNAAFNQKEEDVRNGCLTFPIR 240

Query: 241 FTRGFGLRRKCMDWLKEWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKT 300
           FTRGFGL+RKCM WL+EWQ LPYTSPY DASHLDPRTDVSEKRIVGVFHELLHLTLQK+T
Sbjct: 241 FTRGFGLKRKCMKWLEEWQMLPYTSPYTDASHLDPRTDVSEKRIVGVFHELLHLTLQKRT 300

Query: 301 ERKNVSNLRKPFSMPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSI 360
           ERKNVSNLRKP S PQKFTKVFERHPGIFYISKK D+QTV+LREAYD  +LLQKHP+V I
Sbjct: 301 ERKNVSNLRKPLSCPQKFTKVFERHPGIFYISKKSDSQTVVLREAYDQQQLLQKHPIVEI 360

Query: 361 RERFTSMLRKGQLDRSRGLYKKE-------NPFGHFHHHELDETRYSSEEVSDYNLLSEY 416
           RERF +M+ KG LDRSRGLYK+        +P    ++ EL++    SE  SD NLLSEY
Sbjct: 361 RERFANMMEKGLLDRSRGLYKRSGINGLEVDPSKDVYYDELNDNERKSESESDRNLLSEY 420

[Close]
BLAST of Cla007187 vs. TrEMBL
Match: A0A0D2PS09_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G127200 PE=4 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 1.7e-154
Identity = 281/418 (67.22%), Postives = 325/418 (77.75%), Query Frame = 1 

Query: 4   WLFSRVKLFGFPCKNQRGLNLNYLQGRYLVNIKLKWVKDKYLDTVVSAEKDLRAVCFLVS 63
           +L  + K+FGF C  +RG N  Y Q   LVN+KLKWVKDK LD V++ E+DLRA C LVS
Sbjct: 5   FLCGKGKVFGFSCGLRRGFN--YQQTFSLVNVKLKWVKDKALDAVIAGERDLRAACNLVS 64

Query: 64  IISSSPEHCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSGGTRVPSFCLT 123
           I+SS+P+ CLP+YHL  HR QLGLP+D K+STFIRRYP+IFHES++ DS GT VP F LT
Sbjct: 65  ILSSAPDFCLPIYHLSRHRGQLGLPHDHKLSTFIRRYPTIFHESYVFDSAGTLVPCFELT 124

Query: 124 PEARELHEEEIIVLRQCWTDLRSRLCRLLMLTSDSTLPLQTIDQLRWDMGLPYDYQNSFI 183
            EA  L+ EE+ V+R    DL  RLC+LLMLT D  LPLQTIDQL+WD+GLPY Y ++ I
Sbjct: 125 LEALNLYHEELGVIRDNMIDLIDRLCKLLMLTKDRILPLQTIDQLKWDLGLPYFYIDNLI 184

Query: 184 PYNHDLFSFVHLRDDRIGLKLLSWDNDLAVSELQKNAASQQMEEDIRNGCLAFPIGFTRG 243
           P   DLFS   L DDRIGLKLLSWD+ LAVS+L+KN A QQ EED++N CLAFPIGFTRG
Sbjct: 185 PNYADLFSLFRLPDDRIGLKLLSWDDTLAVSQLEKNVA-QQTEEDLKNNCLAFPIGFTRG 244

Query: 244 FGLRRKCMDWLKEWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTERKN 303
           FGL+RKCM WL+EWQKLPYTSPY DASHLDPRTDVSEKRIVGVFHEL HLT+QKKTERKN
Sbjct: 245 FGLKRKCMGWLEEWQKLPYTSPYADASHLDPRTDVSEKRIVGVFHELFHLTIQKKTERKN 304

Query: 304 VSNLRKPFSMPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIRERF 363
           VSNLRKP S+PQKFTKVFERHPGIFYISK  DTQTV+LREAYD  +++Q+HPLV IRERF
Sbjct: 305 VSNLRKPLSLPQKFTKVFERHPGIFYISKMSDTQTVVLREAYDCQRIVQRHPLVDIRERF 364

Query: 364 TSMLRKGQLDRSRGLYKKENPFGH------FHHHELDETRYSSEEVSDYNLLSEYDSE 416
            SM+RKG  DRSRGLYKK    GH         H+       SE  SD +L SEY+S+
Sbjct: 365 ASMMRKGFRDRSRGLYKKTAYIGHKDPLKIVQGHKGGGNGLDSEVDSDDDLFSEYNSD 419

[Close]
BLAST of Cla007187 vs. NCBI nr
Match: gi|659089626|ref|XP_008445613.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 808.9 bits (2088), Expect = 4.2e-231
Identity = 391/424 (92.22%), Postives = 408/424 (96.23%), Query Frame = 1 

Query: 1   MVTWLFSRVKLFGFPCKNQRGLNLNYLQGRYLVNIKLKWVKDKYLDTVVSAEKDLRAVCF 60
           MV WLFSR+KLFGF CKNQ GL+LNYLQGR LVNIKLKWVKDK LDTVVSAEKDL+AVCF
Sbjct: 1   MVAWLFSRLKLFGFSCKNQTGLSLNYLQGRCLVNIKLKWVKDKDLDTVVSAEKDLKAVCF 60

Query: 61  LVSIISSSPEHCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSGGTRVPSF 120
           LVSIISSSPE+CLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDS GTRVPSF
Sbjct: 61  LVSIISSSPENCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120

Query: 121 CLTPEARELHEEEIIVLRQCWTDLRSRLCRLLMLTSDSTLPLQTIDQLRWDMGLPYDYQN 180
           CLTPEARELHEE+I+VLRQCWTDLRSRLCRLLMLTS  TLPLQTIDQLRWDMGLPYDYQN
Sbjct: 121 CLTPEARELHEEQIVVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180

Query: 181 SFIPYNHDLFSFVHLRDDRIGLKLLSWDNDLAVSELQKNAASQQMEEDIRNGCLAFPIGF 240
           SF+PYNHDLFSF+ L+DDRIGLKLL WDNDLAVSELQKNAASQQMEEDIRNG LAFPIGF
Sbjct: 181 SFVPYNHDLFSFIRLQDDRIGLKLLLWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240

Query: 241 TRGFGLRRKCMDWLKEWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300
           TRGFGL RKCMDWLK+WQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE
Sbjct: 241 TRGFGLNRKCMDWLKDWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300

Query: 301 RKNVSNLRKPFSMPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR 360
           RKNVSNLRKPFS+PQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR
Sbjct: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR 360

Query: 361 ERFTSMLRKGQLDRSRGLYKKENPFGHFHHHELDETRYSSEEVSDYNLLSEYDSESDGLI 420
           ERFTSMLRKGQLDRSRGLYKK+ P GH +H E++ETRYSSEEVSD+N+LSEYDSESDGLI
Sbjct: 361 ERFTSMLRKGQLDRSRGLYKKD-PSGHVYHDEVNETRYSSEEVSDHNMLSEYDSESDGLI 420

Query: 421 DNNC 425
           DNNC
Sbjct: 421 DNNC 423

[Close]
BLAST of Cla007187 vs. NCBI nr
Match: gi|449441530|ref|XP_004138535.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus])

HSP 1 Score: 799.7 bits (2064), Expect = 2.5e-228
Identity = 388/424 (91.51%), Postives = 404/424 (95.28%), Query Frame = 1 

Query: 1   MVTWLFSRVKLFGFPCKNQRGLNLNYLQGRYLVNIKLKWVKDKYLDTVVSAEKDLRAVCF 60
           MV WLFSR+KL GF CKNQRGLNLNYLQGRYLVNI+LKWVKDK LDTVVSAEKDL+AVCF
Sbjct: 1   MVAWLFSRLKLSGFLCKNQRGLNLNYLQGRYLVNIRLKWVKDKDLDTVVSAEKDLKAVCF 60

Query: 61  LVSIISSSPEHCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSGGTRVPSF 120
           LVSIISSSPEHCLPVYHLR HRRQLG+PNDVKMSTFIRRYPSIFHESHILDS GTRVPSF
Sbjct: 61  LVSIISSSPEHCLPVYHLRRHRRQLGIPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120

Query: 121 CLTPEARELHEEEIIVLRQCWTDLRSRLCRLLMLTSDSTLPLQTIDQLRWDMGLPYDYQN 180
           CLTPEARELH E+IIVLRQCWTDLRSRLCRLLMLTS  TLPLQTIDQLRWDMGLPYDYQN
Sbjct: 121 CLTPEARELHAEQIIVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180

Query: 181 SFIPYNHDLFSFVHLRDDRIGLKLLSWDNDLAVSELQKNAASQQMEEDIRNGCLAFPIGF 240
           SFIPYNHD+FSF+ L+D RIGLKLL WDNDLAVSELQKNAASQQMEEDIRNG LAFPIGF
Sbjct: 181 SFIPYNHDMFSFIRLQDHRIGLKLLKWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240

Query: 241 TRGFGLRRKCMDWLKEWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300
           TRGFGL RKCMDWLKEWQ LPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE
Sbjct: 241 TRGFGLNRKCMDWLKEWQTLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300

Query: 301 RKNVSNLRKPFSMPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR 360
           RKNVSNLRKPFS+PQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKL+QKHPLVSIR
Sbjct: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLVQKHPLVSIR 360

Query: 361 ERFTSMLRKGQLDRSRGLYKKENPFGHFHHHELDETRYSSEEVSDYNLLSEYDSESDGLI 420
           ERFTSMLRKGQLDRSRGLYKK+ P GHFH+ E++ET YSSEEVSD+N+L EYDSESDGLI
Sbjct: 361 ERFTSMLRKGQLDRSRGLYKKD-PSGHFHNDEVNETLYSSEEVSDHNMLLEYDSESDGLI 420

Query: 421 DNNC 425
           DNNC
Sbjct: 421 DNNC 423

[Close]
BLAST of Cla007187 vs. NCBI nr
Match: gi|645231844|ref|XP_008222589.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Prunus mume])

HSP 1 Score: 558.9 bits (1439), Expect = 7.5e-156
Identity = 282/415 (67.95%), Postives = 330/415 (79.52%), Query Frame = 1 

Query: 4   WLFSRVKLFGFPCKNQRGLNLNYLQGRYLVNIKLKWVKDKYLDTVVSAEKDLRAVCFLVS 63
           +LF +V  FGF    Q G N  + +G  LVN+KLKWVKD+ LD VV+A +DL+A C LVS
Sbjct: 5   FLFVKVGGFGFFRGCQHGFNYQHKRG--LVNVKLKWVKDRGLDAVVTAARDLKAACILVS 64

Query: 64  IISSSPEHCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSGGTRVPSFCLT 123
           IISSSP+ CLP+Y L CHR QL LP D+K+STFIR++PS+F ESH   SGG RVP F LT
Sbjct: 65  IISSSPQCCLPIYRLSCHRGQLSLPCDLKLSTFIRKFPSVFVESHTFWSGGARVPCFSLT 124

Query: 124 PEARELHEEEIIVLRQCWTDLRSRLCRLLMLTSDSTLPLQTIDQLRWDMGLPYDYQNSFI 183
           PEA +L+ EE+ VL+Q   DL +RL +LLMLT   TLPLQT+DQL+WD+GLPYDYQ+S I
Sbjct: 125 PEALQLYHEELNVLQQNQVDLINRLQKLLMLTQGWTLPLQTLDQLKWDLGLPYDYQHSVI 184

Query: 184 PYNHDLFSFVHLRDDRIGLKLLSWDNDLAVSELQKNAASQQMEEDIRNGCLAFPIGFTRG 243
           P++ DLFSF+ L DDR+GLKLLSWD DLAVS+LQKN+A QQ EED R+GCLAFP+GFTRG
Sbjct: 185 PHHPDLFSFIRLPDDRVGLKLLSWDEDLAVSQLQKNSAIQQKEEDARSGCLAFPVGFTRG 244

Query: 244 FGLRRKCMDWLKEWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTERKN 303
           FGL+RKCM+WLKEWQ LPYTSPY DASHLDPRTDVSEKRIVGVFHELL LT+ KKTERKN
Sbjct: 245 FGLKRKCMEWLKEWQTLPYTSPYSDASHLDPRTDVSEKRIVGVFHELLQLTIHKKTERKN 304

Query: 304 VSNLRKPFSMPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIRERF 363
           VSNLRKP ++PQKFTKVFERHPGIFYISKK  TQTVILREAY+  +LLQKHP V +RERF
Sbjct: 305 VSNLRKPLALPQKFTKVFERHPGIFYISKKCATQTVILREAYNHQQLLQKHPTVDLRERF 364

Query: 364 TSMLRKGQLDRSRGLYKKENPFG---HFHHHELDETRYSSEEVSDYNLLSEYDSE 416
             +LRKG LDRS+GLYKK    G     H  ++   + SSEE S  NL  EYDS+
Sbjct: 365 ARLLRKGLLDRSKGLYKKSKGDGVEVDPHVDDIGNNQSSSEEESVNNLFYEYDSD 417

[Close]
BLAST of Cla007187 vs. NCBI nr
Match: gi|703092451|ref|XP_010094636.1| (hypothetical protein L484_009881 [Morus notabilis])

HSP 1 Score: 558.9 bits (1439), Expect = 7.5e-156
Identity = 282/414 (68.12%), Postives = 328/414 (79.23%), Query Frame = 1 

Query: 1   MVTW-LFSRVKLFGFPCKNQRGLNLNYLQGRYLVNIKLKWVKDKYLDTVVSAEKDLRAVC 60
           M  W LF +V+  GF CK+Q G +  Y Q   LVN+KLKWVKDK LD  V  EKDL+A C
Sbjct: 1   MARWFLFGKVESSGFLCKSQSGFS--YQQKCSLVNVKLKWVKDKALDAAVIVEKDLKAAC 60

Query: 61  FLVSIISSSPEHCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSGGTRVPS 120
            L +IISS+P+  LP+YHL CHR QLGLP D+K+STFIRRYPS+F ESH LD+GGTRVP 
Sbjct: 61  TLATIISSTPQRRLPIYHLSCHRGQLGLPKDLKLSTFIRRYPSVFLESHFLDTGGTRVPC 120

Query: 121 FCLTPEARELHEEEIIVLRQCWTDLRSRLCRLLMLTSDSTLPLQTIDQLRWDMGLPYDYQ 180
           F LT EA ELHEEE+ ++ Q   DL +RL +LLMLT D TLPLQTIDQL+WD GLPYDYQ
Sbjct: 121 FGLTHEAVELHEEELHLVEQNEMDLLNRLRKLLMLTRDWTLPLQTIDQLKWDFGLPYDYQ 180

Query: 181 NSFIPYNHDLFSFVHLRDDRIGLKLLSWDNDLAVSELQKNAASQQMEEDIRNGCLAFPIG 240
           +SFIP + DL SFV L D R+GLKL  WD+D AVSEL KN+ASQ  ++D +N CLAFPIG
Sbjct: 181 HSFIPRHPDLLSFVQLPDKRVGLKLNIWDDDHAVSELLKNSASQPKQQDTKNDCLAFPIG 240

Query: 241 FTRGFGLRRKCMDWLKEWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKT 300
           FTRGFGL+RKCM+WLKEWQ+LPYTSPY +AS+LDPRTDVSEKRIVGVFHELLHLT+QKKT
Sbjct: 241 FTRGFGLKRKCMEWLKEWQRLPYTSPYSEASYLDPRTDVSEKRIVGVFHELLHLTIQKKT 300

Query: 301 ERKNVSNLRKPFSMPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSI 360
           ERKNVSNLRKP ++PQKFTKVFERHPGIFYISKK DTQTVILREAYDG  LLQ+H L  I
Sbjct: 301 ERKNVSNLRKPLALPQKFTKVFERHPGIFYISKKCDTQTVILREAYDGQNLLQRHSLSEI 360

Query: 361 RERFTSMLRKGQLDRSRGLYKK-------ENPFGHFHHHELDETRYSSEEVSDY 407
           RE+F  MLR+G LD+S+GLYKK       E+P  +  H E+D +  SSEE  +Y
Sbjct: 361 REKFARMLREGLLDKSKGLYKKTRRDDMVEDPLKYECHFEVDSSESSSEEEFEY 412

[Close]
BLAST of Cla007187 vs. NCBI nr
Match: gi|470121303|ref|XP_004296715.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 558.5 bits (1438), Expect = 9.8e-156
Identity = 274/398 (68.84%), Postives = 325/398 (81.66%), Query Frame = 1 

Query: 25  NYLQGRYLVNIKLKWVKDKYLDTVVSAEKDLRAVCFLVSIISSSPEHCLPVYHLRCHRRQ 84
           N+ Q R LVN+KLKWVKD+ LD VV+AE+DL+A C LVSIISSS   CLP+YHL CHR Q
Sbjct: 22  NHKQKRNLVNVKLKWVKDRALDAVVTAERDLKAACVLVSIISSSSHGCLPIYHLSCHRGQ 81

Query: 85  LGLPNDVKMSTFIRRYPSIFHESHILDSGGTRVPSFCLTPEARELHEEEIIVLRQCWTDL 144
           L LP ++K+STFIRRYPS+F ESH+ DSGGTRVP F LTPEA +LH+EE  +++Q   D+
Sbjct: 82  LNLPYELKVSTFIRRYPSVFLESHVHDSGGTRVPCFSLTPEAIKLHQEESNLVQQNQIDI 141

Query: 145 RSRLCRLLMLTSDSTLPLQTIDQLRWDMGLPYDYQNSFIPYNHDLFSFVHLRDDRIGLKL 204
            +RL +LLMLT    LPLQTIDQL+WD+GLPYDYQ+S IP++ DLFSF+ L DDR+GLKL
Sbjct: 142 LNRLRKLLMLTRGWKLPLQTIDQLKWDIGLPYDYQHSVIPHHPDLFSFISLPDDRVGLKL 201

Query: 205 LSWDNDLAVSELQKNAASQQMEEDIRNGCLAFPIGFTRGFGLRRKCMDWLKEWQKLPYTS 264
           LSWD+DLAVS+LQKN+A QQ +ED+RNGCLAFPIGFTRGFGL+RKCM+WLKEWQ LPY S
Sbjct: 202 LSWDDDLAVSQLQKNSAIQQEKEDMRNGCLAFPIGFTRGFGLKRKCMEWLKEWQSLPYNS 261

Query: 265 PYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTERKNVSNLRKPFSMPQKFTKVFERH 324
           PY D SH+DPRTD SEKR+VGVFHELLHLT+QKKTERKNVSNLRKP ++PQKFTKVFERH
Sbjct: 262 PYYDTSHIDPRTDESEKRVVGVFHELLHLTIQKKTERKNVSNLRKPLALPQKFTKVFERH 321

Query: 325 PGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIRERFTSMLRKGQLDRSRGLYKKE-- 384
           PGIFYISKK DTQTVILREAYD  +LLQKHP   +RE+F  +LRKG LDRS GLYKK   
Sbjct: 322 PGIFYISKKCDTQTVILREAYDHQQLLQKHPTAELREKFAMLLRKGLLDRSNGLYKKSPG 381

Query: 385 -----NPFGHFHHHELDETRYSSEEVSDYNLLSEYDSE 416
                +P  H     + + R S +E S+ +LLSEY+S+
Sbjct: 382 DVSEVDPLKHNIVDNISDYRSSFKEDSENDLLSEYESD 419

The following BLAST results are available for this feature:
BLAST of Cla007187 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RPD1_ARATH1.1e-2627.78Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1[more]
BLAST of Cla007187 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAR1_CUCSA1.8e-22891.51Uncharacterized protein OS=Cucumis sativus GN=Csa_6G022360 PE=4 SV=1[more]
W9QX20_9ROSA5.2e-15668.12Uncharacterized protein OS=Morus notabilis GN=L484_009881 PE=4 SV=1[more]
M5XWR3_PRUPE2.0e-15567.15Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006119mg PE=4 SV=1[more]
F6I4B7_VITVI1.3e-15466.67Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0062g01420 PE=4 SV=... [more]
A0A0D2PS09_GOSRA1.7e-15467.22Uncharacterized protein OS=Gossypium raimondii GN=B456_005G127200 PE=4 SV=1[more]
BLAST of Cla007187 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659089626|ref|XP_008445613.1|4.2e-23192.22PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo][more]
gi|449441530|ref|XP_004138535.1|2.5e-22891.51PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus][more]
gi|645231844|ref|XP_008222589.1|7.5e-15667.95PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Prunus mume][more]
gi|703092451|ref|XP_010094636.1|7.5e-15668.12hypothetical protein L484_009881 [Morus notabilis][more]
gi|470121303|ref|XP_004296715.1|9.8e-15668.84PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021099PORR_domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU76009watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla007187Cla007187.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU76009WMU76009transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 40..370
score: 7.8E
NoneNo IPR availablePANTHERPTHR31476FAMILY NOT NAMEDcoord: 1..415
score: 2.7E