CmoCh17G001330 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh17G001330
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	(AWPM-19-like protein) (Plasma membrane associated protein-like)
Location	Cmo_Chr17 : 770701 .. 772340 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTAAAAGCTTTTGCCTTATCTGCTTTCGGTTTGTGATAATATCATCATCATCATCTTTGCAGCTGTTGTTTATTTCTGGTTTTTGGAGACAGGAAAGATGGCTCAAACCATGGGAAGGAACATGGCAGCTCCATTGCTGTTTCTCAACTTGATCATGTATTTTATTCTGCTTGGGTTTGCTAGTTGGTGTATTAATAGATACATCAATGGCACAACCTACCATCCTAGTAAGTTTTGCTTTTCAATGTTTGGAGTCTTGCATCAAGTTGTGTAGTTCTTGGTGTCTTTTCAACCATGTTCTTTTGATTATTTGATCATTTTCCGTCCTTGAGAATGTACTTGACAGTCTACTTAACAAACTCATCGTTGGTAGATATTCGTCCTTTTTGGACTCGCTTTCGAGCTTTAACTTCGAAGTTTTTAAAACGAAAAACGCTTTAGGTTAGGAAGAGATTTTTACATGCTTTTCCCTAAGGTCTATAAAACCTTCTTCCAAGGAGGAATGTATTTTCACACGCTTTCTCAACTTTTTTTAAGGATACATTTGCTGCGGAGAGATTTTAGGATGCTTTAAAACGTGTCTAGGAAGAGATTTTCCCACACTTTTTTTCAACGTCTTTAAAACATGTCTTCTGCATGCTAGGGAGAGATTCTAGGACGTCTAGAAAGAGATTTGTAGACTTTCACACGCTCTCCTCCTTAAAACACATCTGCTGGGGAGAGATTATGTTTGTTCTTAGTGGGAAAAAAATGCAAAAGCTCTCTTAAACACAAATTGTCAGGTTTTACAAGCATAATTATGCTAATCATGACCTATGCTTGGATTGTTCGGCCTCATTTTTTTTTTTTTAACCCAAAGAACAGACATTGACGGTTGTTTTTGGACTGGACAAGGTATGGGAGGCAACGGAGCGACGCCGTTTTTCTTGACATTTGCAATGCTAACAGCAGTTATGGGAGTGGCATCAAAACTGGCTGGACTCTACCATATCAGAGCTTGGAGGAGCGACAGCCTCGCCGGCGCAGGATCAACTTCATTGCTCACTTGGGCTGTAACTGTTCTAGCTTTTGGGTAACTTTCTACAACTTTCACAACCATTTCTCTTCTTTTTAGAGAAGTAATTCCAAGATTCCTTTTCACTTCCCTTTCCGCAGCTTGGCCTGCAAGCAAATCAGCATAGGAGGCCACAGAGGGTGGAGGCTGAGAGTTGTGGAAGCTTTCATAATAATATTGACCATCACCCAGCTTCTGTATCTGCTCCTGCTCCACGCTGGGATCTTCAGCCGCCGCTACGGCCCTGGTTATTGGGATACCGACTATGGCATGGGCGGAGGAACTGCAGTTCCTGGAGAGCCTCCCAAGGGAACTGCCGGGACCAGGGTGGTTTAGAACAGATGGTTGTTATGTATGATATCAGTTGGTTTGTTTTTCTCCTGCTTTGTTTTCGTGGAAGGACGCATAGTTTCTGGTTCTGTCATCTCTTTCAAAACCTCAATGTAGGATGTTTAATAAGAGATTGGGATGTTTCACCTTGAAACAAGAGCAACACTAAACCAATATATGTAACCAATAATGAACTGCCATTTTCATAACAAGAAGATAAGCCTATATAGAACACTAATTAATAAAATGCAAAA

mRNA sequence

TATTAAAAGCTTTTGCCTTATCTGCTTTCGGTTTGTGATAATATCATCATCATCATCTTTGCAGCTGTTGTTTATTTCTGGTTTTTGGAGACAGGAAAGATGGCTCAAACCATGGGAAGGAACATGGCAGCTCCATTGCTGTTTCTCAACTTGATCATGTATTTTATTCTGCTTGGGTTTGCTAGTTGGTGTATTAATAGATACATCAATGGCACAACCTACCATCCTAGTATGGGAGGCAACGGAGCGACGCCGTTTTTCTTGACATTTGCAATGCTAACAGCAGTTATGGGAGTGGCATCAAAACTGGCTGGACTCTACCATATCAGAGCTTGGAGGAGCGACAGCCTCGCCGGCGCAGGATCAACTTCATTGCTCACTTGGGCTGTAACTGTTCTAGCTTTTGGCTTGGCCTGCAAGCAAATCAGCATAGGAGGCCACAGAGGGTGGAGGCTGAGAGTTGTGGAAGCTTTCATAATAATATTGACCATCACCCAGCTTCTGTATCTGCTCCTGCTCCACGCTGGGATCTTCAGCCGCCGCTACGGCCCTGGTTATTGGGATACCGACTATGGCATGGGCGGAGGAACTGCAGTTCCTGGAGAGCCTCCCAAGGGAACTGCCGGGACCAGGGTGGTTTAGAACAGATGGTTGTTATGTATGATATCAGTTGGTTTGTTTTTCTCCTGCTTTGTTTTCGTGGAAGGACGCATAGTTTCTGGTTCTGTCATCTCTTTCAAAACCTCAATGTAGGATGTTTAATAAGAGATTGGGATGTTTCACCTTGAAACAAGAGCAACACTAAACCAATATATGTAACCAATAATGAACTGCCATTTTCATAACAAGAAGATAAGCCTATATAGAACACTAATTAATAAAATGCAAAA

Coding sequence (CDS)

ATGGCTCAAACCATGGGAAGGAACATGGCAGCTCCATTGCTGTTTCTCAACTTGATCATGTATTTTATTCTGCTTGGGTTTGCTAGTTGGTGTATTAATAGATACATCAATGGCACAACCTACCATCCTAGTATGGGAGGCAACGGAGCGACGCCGTTTTTCTTGACATTTGCAATGCTAACAGCAGTTATGGGAGTGGCATCAAAACTGGCTGGACTCTACCATATCAGAGCTTGGAGGAGCGACAGCCTCGCCGGCGCAGGATCAACTTCATTGCTCACTTGGGCTGTAACTGTTCTAGCTTTTGGCTTGGCCTGCAAGCAAATCAGCATAGGAGGCCACAGAGGGTGGAGGCTGAGAGTTGTGGAAGCTTTCATAATAATATTGACCATCACCCAGCTTCTGTATCTGCTCCTGCTCCACGCTGGGATCTTCAGCCGCCGCTACGGCCCTGGTTATTGGGATACCGACTATGGCATGGGCGGAGGAACTGCAGTTCCTGGAGAGCCTCCCAAGGGAACTGCCGGGACCAGGGTGGTTTAG

Homology

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BLAST of CmoCh17G001330 vs. TrEMBL
Match: A0A0A0LI45_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G169790 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 2.1e-93
Identity = 171/180 (95.00%), Postives = 176/180 (97.78%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQTMGRNMAAPLLFLNLIMY ILLGFASWC+NR+INGTTYHPSMGGNGATPFFLTFAML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYLILLGFASWCLNRFINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
           TAV+G+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQI+IGGHRGWRLR
Sbjct: 61  TAVLGIASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAVPGEPPKGTAGTRVV 180
           VVEAFIIILT TQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTA PGEPPKGT GTRVV
Sbjct: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTTGTRVV 180

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BLAST of CmoCh17G001330 vs. TrEMBL
Match: V4S0A7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006007mg PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.3e-68
Identity = 131/176 (74.43%), Postives = 148/176 (84.09%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQT+GRN+AAPLLFLNLIMY I++GFASWC+NR+ING T HPS GGNGAT FFLTFA+L
Sbjct: 1   MAQTVGRNIAAPLLFLNLIMYLIVVGFASWCLNRFINGQTNHPSFGGNGATMFFLTFALL 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
             V+GVASK  G  HIRAWRSDSLA AGSTSL+ WA+T +AFGLACK+I++G HRGWRLR
Sbjct: 61  AGVLGVASKFIGGNHIRAWRSDSLAAAGSTSLIAWAITAIAFGLACKEINLGQHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAVPGEPPKGTAG 177
           +VEAFIIILT TQ LYLLLLHAG FS RYGPGY DTDYG+G G +V    PKG  G
Sbjct: 121 MVEAFIIILTFTQFLYLLLLHAGTFSSRYGPGYRDTDYGIGAGPSVDPAGPKGVVG 176

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BLAST of CmoCh17G001330 vs. TrEMBL
Match: A0A0B2RXU3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_016934 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 5.1e-68
Identity = 133/180 (73.89%), Postives = 152/180 (84.44%), Query Frame = 1


Query: 4   TMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAMLTAV 63
           T+GRN+AAPLLFLNLIMYFI+LGFASWC+NR+ING TYHPS GGNGAT FFLTF++L AV
Sbjct: 3   TVGRNVAAPLLFLNLIMYFIVLGFASWCLNRFINGQTYHPSFGGNGATMFFLTFSILAAV 62

Query: 64  MGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLRVVE 123
           +G+ SKL G  H+R WRSDSLA AG+TS++ WAVT LAFGLACKQI +GGHRGWRLRVVE
Sbjct: 63  LGIVSKLLGGNHMRTWRSDSLASAGATSMVAWAVTALAFGLACKQIHLGGHRGWRLRVVE 122

Query: 124 AFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDY----GMGGGTAVPGEPPKGTAGTRV 180
           AFIIILT TQLLYL+L+HAG++S RYGPGY DTDY    G+GG T  P   P  TAGTRV
Sbjct: 123 AFIIILTFTQLLYLILIHAGLYSSRYGPGYHDTDYGHGHGVGGTTGDPMHKP-ATAGTRV 181

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BLAST of CmoCh17G001330 vs. TrEMBL
Match: Q39872_SOYBN (PGmPM3 OS=Glycine max GN=GmPM3 PE=2 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 5.1e-68
Identity = 133/180 (73.89%), Postives = 152/180 (84.44%), Query Frame = 1


Query: 4   TMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAMLTAV 63
           T+GRN+AAPLLFLNLIMYFI+LGFASWC+NR+ING TYHPS GGNGAT FFLTF++L AV
Sbjct: 3   TVGRNVAAPLLFLNLIMYFIVLGFASWCLNRFINGQTYHPSFGGNGATMFFLTFSILAAV 62

Query: 64  MGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLRVVE 123
           +G+ SKL G  H+R WRSDSLA AG+TS++ WAVT LAFGLACKQI +GGHRGWRLRVVE
Sbjct: 63  LGIVSKLLGGNHMRTWRSDSLASAGATSMVAWAVTALAFGLACKQIHLGGHRGWRLRVVE 122

Query: 124 AFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDY----GMGGGTAVPGEPPKGTAGTRV 180
           AFIIILT TQLLYL+L+HAG++S RYGPGY DTDY    G+GG T  P   P  TAGTRV
Sbjct: 123 AFIIILTFTQLLYLILIHAGLYSSRYGPGYHDTDYGHGHGVGGTTGDPMHKP-ATAGTRV 181

[Close]

BLAST of CmoCh17G001330 vs. TrEMBL
Match: A0A068TSW8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00026453001 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.1e-67
Identity = 128/176 (72.73%), Postives = 152/176 (86.36%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MA+T+GR++AAPLLFLNLIMYFI+LGFASWC+N YING T HPS GGNGATPFFLTFA+L
Sbjct: 1   MARTVGRSLAAPLLFLNLIMYFIVLGFASWCLNHYINGQTNHPSFGGNGATPFFLTFAIL 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
            +V+G+ASKLAG  H+RAWRSDSLA AG++SL+ WAVT+LAFGLACK+I++GG RGWRL+
Sbjct: 61  ASVLGIASKLAGGNHLRAWRSDSLAAAGASSLVAWAVTILAFGLACKEINVGGRRGWRLK 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAVPGEPPKGTAG 177
           V+E FII L  TQLLY+LL+HAG+FS RYGPGY D DYG+G     PG  PKGTAG
Sbjct: 121 VLEGFIIALGATQLLYVLLIHAGMFSSRYGPGYRDPDYGLG----APGAEPKGTAG 172

[Close]

BLAST of CmoCh17G001330 vs. TAIR10
Match: AT1G04560.1 (AT1G04560.1 AWPM-19-like family protein)

HSP 1 Score: 246.1 bits (627), Expect = 1.6e-65
Identity = 125/186 (67.20%), Postives = 147/186 (79.03%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MA T+GRN+AAPLLFLNL+MY I+LGFASWC+N+YING T HPS GGNGATPFFLTF++L
Sbjct: 1   MATTVGRNIAAPLLFLNLVMYLIVLGFASWCLNKYINGQTNHPSFGGNGATPFFLTFSIL 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
            AV+GVASKLAG  HIR WR+DSLA AG++S++ WA+T LA GLACKQI+IGG RGWRL+
Sbjct: 61  AAVVGVASKLAGANHIRFWRNDSLAAAGASSIVAWAITALAMGLACKQINIGGWRGWRLK 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMG---GGTAVP---GEPPKGT 180
           ++EAFIIILT TQLLYL+L+HAG  S +YGPGY D DY  G   G   VP   GE   G 
Sbjct: 121 MIEAFIIILTFTQLLYLMLIHAGSLSSKYGPGYRDQDYATGQAHGHGHVPHTVGEHKAGV 180

[Close]

BLAST of CmoCh17G001330 vs. TAIR10
Match: AT1G29520.1 (AT1G29520.1 AWPM-19-like family protein)

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-23
Identity = 64/154 (41.56%), Postives = 92/154 (59.74%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYI-NGTTYHPSMG------------G 60
           MA    + +A+ LL LN  MY I+LG   W +NR I +G    P++             G
Sbjct: 1   MAGEQIKPVASGLLVLNFCMYVIVLGIGGWAMNRAIDHGFEVGPNLELPAHFSPIYFPMG 60

Query: 61  NGATPFFLTFAMLTAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACK 120
           N AT FF+ FA+L  V+G AS ++GL HIR+W   SL  A + + + W +TVLA G A K
Sbjct: 61  NAATGFFVIFALLAGVVGAASTISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAWK 120

Query: 121 QISIGGHRGWRLRVVEAFIIILTITQLLYLLLLH 142
           +I + G R  +LR +EAF+IIL++TQL+Y+  +H
Sbjct: 121 EIELQG-RNAKLRTMEAFLIILSVTQLIYIAAVH 153

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BLAST of CmoCh17G001330 vs. TAIR10
Match: AT5G46530.1 (AT5G46530.1 AWPM-19-like family protein)

HSP 1 Score: 103.2 bits (256), Expect = 1.7e-22
Identity = 62/155 (40.00%), Postives = 93/155 (60.00%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYIN-----GTTY---------HPSMG 60
           M +   + +A+ LL LN  MY I+LG  +W +N+ IN     G  Y         H  MG
Sbjct: 1   MVEHQMKPVASFLLVLNFCMYAIVLGIGAWSMNKAINHGFLIGADYSLPAHFSPIHFPMG 60

Query: 61  GNGATPFFLTFAMLTAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLAC 120
            N AT FF+ FA++  V G AS ++G+ H+++W + SL  A S + + W++T+LA G  C
Sbjct: 61  -NAATGFFIMFALIAGVAGAASVISGISHLQSWTTTSLPAAVSAATIAWSLTLLAMGFGC 120

Query: 121 KQISIGGHRGWRLRVVEAFIIILTITQLLYLLLLH 142
           K+I + G R  RLR +EAF+IIL+ TQLLY+  ++
Sbjct: 121 KEIEL-GMRNARLRTMEAFLIILSATQLLYIAAIY 153

[Close]

BLAST of CmoCh17G001330 vs. TAIR10
Match: AT5G18970.1 (AT5G18970.1 AWPM-19-like family protein)

HSP 1 Score: 95.5 bits (236), Expect = 3.5e-20
Identity = 59/157 (37.58%), Postives = 89/157 (56.69%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSM-------------GG 60
           MA    ++ A  LL LNL +YF++   ASW +N  I  T    S               G
Sbjct: 1   MASGGSKSAAFMLLMLNLGLYFVITIIASWAVNHGIERTRESASTLSLPAKIFPIYFPVG 60

Query: 61  NGATPFFLTFAMLTAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACK 120
           N AT FF+ F ++  V+G+A+ L G+ ++  W S +L  A ++SL++W++T+LA GLACK
Sbjct: 61  NMATGFFVIFTLIAGVVGMATSLTGIINVLQWDSPNLHSAAASSLISWSLTLLAMGLACK 120

Query: 121 QISIGGHRGWRLRVVEAFIIILTITQLLYLLLLHAGI 145
           +I+IG      LR +E   II++ TQLL    +HAG+
Sbjct: 121 EINIGWTEA-NLRTLEVLTIIVSATQLLCTGAIHAGV 156

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BLAST of CmoCh17G001330 vs. NCBI nr
Match: gi|659121514|ref|XP_008460698.1| (PREDICTED: uncharacterized protein LOC103499466 [Cucumis melo])

HSP 1 Score: 351.3 bits (900), Expect = 1.0e-93
Identity = 172/180 (95.56%), Postives = 177/180 (98.33%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQTMGRNMAAPLLFLNLIMY ILLGFASWC+NR+INGTTYHPSMGGNGATPFFLTFAML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYLILLGFASWCLNRFINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
           TAV+G+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQI+IGGHRGWRLR
Sbjct: 61  TAVLGIASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAVPGEPPKGTAGTRVV 180
           VVEAFIIILT TQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTA PGEPPKGTAGTRVV
Sbjct: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV 180

[Close]

BLAST of CmoCh17G001330 vs. NCBI nr
Match: gi|449458914|ref|XP_004147191.1| (PREDICTED: uncharacterized protein LOC101215543 [Cucumis sativus])

HSP 1 Score: 349.7 bits (896), Expect = 2.9e-93
Identity = 171/180 (95.00%), Postives = 176/180 (97.78%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQTMGRNMAAPLLFLNLIMY ILLGFASWC+NR+INGTTYHPSMGGNGATPFFLTFAML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYLILLGFASWCLNRFINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
           TAV+G+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQI+IGGHRGWRLR
Sbjct: 61  TAVLGIASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAVPGEPPKGTAGTRVV 180
           VVEAFIIILT TQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTA PGEPPKGT GTRVV
Sbjct: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTTGTRVV 180

[Close]

BLAST of CmoCh17G001330 vs. NCBI nr
Match: gi|568853146|ref|XP_006480228.1| (PREDICTED: uncharacterized protein LOC102609870 [Citrus sinensis])

HSP 1 Score: 266.9 bits (681), Expect = 2.5e-68
Identity = 132/176 (75.00%), Postives = 148/176 (84.09%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQT+GRN+AAPLLFLNLIMY I++GFASWC+NR+ING T HPS GGNGAT FFLTFA+L
Sbjct: 1   MAQTVGRNIAAPLLFLNLIMYLIVVGFASWCLNRFINGQTNHPSFGGNGATMFFLTFALL 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
             V+GVASK  G  HIRAWRSDSLA AGSTSL+ WA+T LAFGLACK+I++G HRGWRLR
Sbjct: 61  AGVLGVASKFIGGNHIRAWRSDSLAAAGSTSLIAWAITALAFGLACKEINLGQHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAVPGEPPKGTAG 177
           VVEAFIIILT TQ LYLLLLHA +FS RYGPGY DTDYG+G G +V    PKG  G
Sbjct: 121 VVEAFIIILTFTQFLYLLLLHASMFSSRYGPGYRDTDYGIGAGPSVDPAGPKGVGG 176

[Close]

BLAST of CmoCh17G001330 vs. NCBI nr
Match: gi|567854545|ref|XP_006420392.1| (hypothetical protein CICLE_v10006007mg [Citrus clementina])

HSP 1 Score: 266.5 bits (680), Expect = 3.3e-68
Identity = 131/176 (74.43%), Postives = 148/176 (84.09%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQT+GRN+AAPLLFLNLIMY I++GFASWC+NR+ING T HPS GGNGAT FFLTFA+L
Sbjct: 1   MAQTVGRNIAAPLLFLNLIMYLIVVGFASWCLNRFINGQTNHPSFGGNGATMFFLTFALL 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
             V+GVASK  G  HIRAWRSDSLA AGSTSL+ WA+T +AFGLACK+I++G HRGWRLR
Sbjct: 61  AGVLGVASKFIGGNHIRAWRSDSLAAAGSTSLIAWAITAIAFGLACKEINLGQHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAVPGEPPKGTAG 177
           +VEAFIIILT TQ LYLLLLHAG FS RYGPGY DTDYG+G G +V    PKG  G
Sbjct: 121 MVEAFIIILTFTQFLYLLLLHAGTFSSRYGPGYRDTDYGIGAGPSVDPAGPKGVVG 176

[Close]

BLAST of CmoCh17G001330 vs. NCBI nr
Match: gi|351734490|ref|NP_001238105.1| (maturation protein PM3 [Glycine max])

HSP 1 Score: 265.4 bits (677), Expect = 7.3e-68
Identity = 133/180 (73.89%), Postives = 152/180 (84.44%), Query Frame = 1


Query: 4   TMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAMLTAV 63
           T+GRN+AAPLLFLNLIMYFI+LGFASWC+NR+ING TYHPS GGNGAT FFLTF++L AV
Sbjct: 3   TVGRNVAAPLLFLNLIMYFIVLGFASWCLNRFINGQTYHPSFGGNGATMFFLTFSILAAV 62

Query: 64  MGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLRVVE 123
           +G+ SKL G  H+R WRSDSLA AG+TS++ WAVT LAFGLACKQI +GGHRGWRLRVVE
Sbjct: 63  LGIVSKLLGGNHMRTWRSDSLASAGATSMVAWAVTALAFGLACKQIHLGGHRGWRLRVVE 122

Query: 124 AFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDY----GMGGGTAVPGEPPKGTAGTRV 180
           AFIIILT TQLLYL+L+HAG++S RYGPGY DTDY    G+GG T  P   P  TAGTRV
Sbjct: 123 AFIIILTFTQLLYLILIHAGLYSSRYGPGYHDTDYGHGHGVGGTTGDPMHKP-ATAGTRV 181

The following BLAST results are available for this feature:

BLAST of CmoCh17G001330 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh17G001330 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LI45_CUCSA	2.1e-93	95.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G169790 PE=4 SV=1	[more]
V4S0A7_9ROSI	2.3e-68	74.43	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006007mg PE=4 SV=1	[more]
A0A0B2RXU3_GLYSO	5.1e-68	73.89	Uncharacterized protein OS=Glycine soja GN=glysoja_016934 PE=4 SV=1	[more]
Q39872_SOYBN	5.1e-68	73.89	PGmPM3 OS=Glycine max GN=GmPM3 PE=2 SV=1	[more]
A0A068TSW8_COFCA	1.1e-67	72.73	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00026453001 PE=4 SV=1	[more]

BLAST of CmoCh17G001330 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G04560.1	1.6e-65	67.20	AWPM-19-like family protein	[more]
AT1G29520.1	1.5e-23	41.56	AWPM-19-like family protein	[more]
AT5G46530.1	1.7e-22	40.00	AWPM-19-like family protein	[more]
AT5G18970.1	3.5e-20	37.58	AWPM-19-like family protein	[more]

BLAST of CmoCh17G001330 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121514\|ref\|XP_008460698.1\|	1.0e-93	95.56	PREDICTED: uncharacterized protein LOC103499466 [Cucumis melo]	[more]
gi\|449458914\|ref\|XP_004147191.1\|	2.9e-93	95.00	PREDICTED: uncharacterized protein LOC101215543 [Cucumis sativus]	[more]
gi\|568853146\|ref\|XP_006480228.1\|	2.5e-68	75.00	PREDICTED: uncharacterized protein LOC102609870 [Citrus sinensis]	[more]
gi\|567854545\|ref\|XP_006420392.1\|	3.3e-68	74.43	hypothetical protein CICLE_v10006007mg [Citrus clementina]	[more]
gi\|351734490\|ref\|NP_001238105.1\|	7.3e-68	73.89	maturation protein PM3 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008390	AWPM-19

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G001330.1	CmoCh17G001330.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008390	AWPM-19-like	PFAM	PF05512	AWPM-19	coord: 15..143 score: 8.9
None	No IPR available	PANTHER	PTHR33294	FAMILY NOT NAMED	coord: 1..164 score: 4.7E
None	No IPR available	PANTHER	PTHR33294:SF5	AWPM-19-LIKE FAMILY PROTEIN	coord: 1..164 score: 4.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh17G001330	Cucsa.383250	Cucumber (Gy14) v1	cgycmoB1055
CmoCh17G001330	CmaCh17G001300	Cucurbita maxima (Rimu)	cmacmoB353
CmoCh17G001330	Cla007624	Watermelon (97103) v1	cmowmB353
CmoCh17G001330	Csa2G169790	Cucumber (Chinese Long) v2	cmocuB339
CmoCh17G001330	MELO3C023049	Melon (DHL92) v3.5.1	cmomeB331
CmoCh17G001330	ClCG06G007310	Watermelon (Charleston Gray)	cmowcgB325
CmoCh17G001330	CSPI02G09930	Wild cucumber (PI 183967)	cmocpiB346
CmoCh17G001330	Lsi09G011880	Bottle gourd (USVL1VR-Ls)	cmolsiB320
CmoCh17G001330	Cp4.1LG12g01210	Cucurbita pepo (Zucchini)	cmocpeB335
CmoCh17G001330	MELO3C023049.2	Melon (DHL92) v3.6.1	cmomedB381
CmoCh17G001330	CsaV3_2G012350	Cucumber (Chinese Long) v3	cmocucB0413
CmoCh17G001330	Cla97C06G117100	Watermelon (97103) v2	cmowmbB361
CmoCh17G001330	Bhi12G001345	Wax gourd	cmowgoB0457
CmoCh17G001330	CsGy2G010030	Cucumber (Gy14) v2	cgybcmoB186
CmoCh17G001330	Carg10116	Silver-seed gourd	carcmoB0320

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh17G001330	Silver-seed gourd	carcmoB0329
CmoCh17G001330	Silver-seed gourd	carcmoB1052
CmoCh17G001330	Silver-seed gourd	carcmoB1285
CmoCh17G001330	Silver-seed gourd	carcmoB1448
CmoCh17G001330	Cucumber (Chinese Long) v3	cmocucB0420
CmoCh17G001330	Watermelon (97103) v2	cmowmbB350
CmoCh17G001330	Wax gourd	cmowgoB0453
CmoCh17G001330	Wax gourd	cmowgoB0466
CmoCh17G001330	Cucurbita moschata (Rifu)	cmocmoB198
CmoCh17G001330	Cucurbita moschata (Rifu)	cmocmoB300
CmoCh17G001330	Cucurbita moschata (Rifu)	cmocmoB303
CmoCh17G001330	Cucurbita moschata (Rifu)	cmocmoB308
CmoCh17G001330	Cucurbita moschata (Rifu)	cmocmoB310
CmoCh17G001330	Cucumber (Gy14) v1	cgycmoB0708
CmoCh17G001330	Cucurbita maxima (Rimu)	cmacmoB251
CmoCh17G001330	Cucurbita maxima (Rimu)	cmacmoB505
CmoCh17G001330	Cucurbita maxima (Rimu)	cmacmoB590
CmoCh17G001330	Cucurbita maxima (Rimu)	cmacmoB809
CmoCh17G001330	Cucurbita maxima (Rimu)	cmacmoB887
CmoCh17G001330	Wild cucumber (PI 183967)	cmocpiB353
CmoCh17G001330	Cucumber (Chinese Long) v2	cmocuB346
CmoCh17G001330	Melon (DHL92) v3.5.1	cmomeB336
CmoCh17G001330	Watermelon (Charleston Gray)	cmowcgB315
CmoCh17G001330	Watermelon (97103) v1	cmowmB340
CmoCh17G001330	Cucurbita pepo (Zucchini)	cmocpeB351
CmoCh17G001330	Cucurbita pepo (Zucchini)	cmocpeB364
CmoCh17G001330	Cucurbita pepo (Zucchini)	cmocpeB369
CmoCh17G001330	Cucurbita pepo (Zucchini)	cmocpeB373
CmoCh17G001330	Bottle gourd (USVL1VR-Ls)	cmolsiB345
CmoCh17G001330	Cucumber (Gy14) v2	cgybcmoB317
CmoCh17G001330	Melon (DHL92) v3.6.1	cmomedB385