CmaCh17G001300 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G001300
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	AWPM-19-like membrane family protein
Location	Cma_Chr17 : 678312 .. 680152 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTATTAAAAGCTTTTGCCTTATGTGCTTTCGGTTTGTGATAATATCATCATCTTCGCAGCTGTTGTTTATTTCTGGTTTTTGGAGACAGGAAGATGGCTCAAACCATGGGAAGGAACATGGCAGCTCCATTGCTGTTTCTCAACTTGATCATGTATTTTATCCTCCTTGGGTTTGCTAGTTGGTGTATTAATAGATACATCAATGGCACAACCTACCATCCTAGTAAGTTTTGCTTTTCAATGTTTGGAGTCTTGCATCAAGTTATGTAGTTCTTGGTGTCTTTTCAACCATTTTCTTTTTGATTATTTGATCATTTTCTGTCCTTGAGAATGTACTTAATAGTCTAATGTCATCGCTACGAATCGCTACCAAACTCATCGTTGGTAGATATTTGTCCTTTTTAATTTCTAAAACGAAAAACGCCTCATTTAGGAAGAGAGTTTCACACGCTTCTTTTTCCGAAGGTCTTTAAAACATGTCTTTCAAGGAGGAAGGTATTTTCACACGCTAAAACCGTGTTTGCTACAGAGAAATTTCTCCAATTTTAGGATGCTTTAAGATCTCTCTAGAAAGAGATTTTCCCACCCTTTTTCTTTTTCTCAAGGTCTAAAAACATGTCTTCTACGTGCTAGGGGGAGATTTTAGGACGCTTTTTAAAACACATCTAGGACTAGATTTTCCACACTTTTCCTCGAGGTCTTTAAAACATGTCTCCTTCCACACTTTTCCTCGAGGTCTTTAAAACATGTCTCCTAAGGAGGAAGATATTTTCCCACGCACGCTTTCCTCATTAAAACGGGTCTGTTGGGGGAGAGATCTGGGGAGAGATTTTTAAGTGAGATCTCCAGATGTTTGTTCTTGGGGGAAAAATGCAAAAACTCTCTTAAACACAAATTGTCAGCTTTTAAAAGCATAATTATGCTAATCATGAGCTATGCTTGCATTGTTCGGCCTCATTTTTTTTTTAACCCAAAGAAGAGACATTGACGGTTGTTTTTGGTTTTTGGACTGGACAAGGTATGGGAGGCTCGCTCACGCCGTTTTTCTTGACATTTGCAATGCTAACAGCAGTTATGGGAGTGGCATCAAAACTGGCTGGACTCTACCATATCAGAGCTTGGAGGAGCGACAGCCTCGCCGGCGCAGGATCAACTTCATTGCTCACTTGGGCTGTAACTGTTCTAGCTTTTGGGTAACTTTCTATTACTTTCACAACCATATTTCTCTTCCATTTACACTTGAGAAATTCTAAGATTCCTTTTTTCATTTCCCTTTTCACAGCCTGGCCTGCAAGCAAATCAGCATAGGAGGCCACAGAGGGTGGAGGCTGAGAGTTGTGGAAGCTTTCATAATAATATTGACCATCACCCAGCTTCTGTATCTGCTCCTGCTCCACGCTGGGATCTTCAGCCGCCGCTACGGCCCTGGTTATTGGGATACCGACTATGGCATGGGCGGAGGAACTGCAGTTCCTGGAGAGCCTCCCAAGGGAACTGCCGGGACCAGGGTGGTTTAGAACAGATGGTTGTTATGTATGATATCAGTTGGTTTGTTTTTCTCTTGCTTTGTTTTCGTGCAAGGACACACAGTTTCTGGTTCTGTCATCTCTTTCAAAACCTCAATGTAGCATGTTTAATAAGAGATTGGTATGTTTCACAATGAAACAAGGATATGAACAGACCAACACTAAACCAATATATGTAACCAATAATGAACTGCCATTTTCATAACAAGAAGATGAGCCTATAGAACACTAATTAATAAAAATGCAAAACGCCGTTGAAGGCGGTTGCAACACTTGCTGAAGTCTAGAAGGATTGAGAAATAGAATTACCTGCG

mRNA sequence

TGTATTAAAAGCTTTTGCCTTATGTGCTTTCGGTTTGTGATAATATCATCATCTTCGCAGCTGTTGTTTATTTCTGGTTTTTGGAGACAGGAAGATGGCTCAAACCATGGGAAGGAACATGGCAGCTCCATTGCTGTTTCTCAACTTGATCATGTATTTTATCCTCCTTGGGTTTGCTAGTTGGTGTATTAATAGATACATCAATGGCACAACCTACCATCCTAGTATGGGAGGCTCGCTCACGCCGTTTTTCTTGACATTTGCAATGCTAACAGCAGTTATGGGAGTGGCATCAAAACTGGCTGGACTCTACCATATCAGAGCTTGGAGGAGCGACAGCCTCGCCGGCGCAGGATCAACTTCATTGCTCACTTGGGCTGTAACTGTTCTAGCTTTTGGCCTGGCCTGCAAGCAAATCAGCATAGGAGGCCACAGAGGGTGGAGGCTGAGAGTTGTGGAAGCTTTCATAATAATATTGACCATCACCCAGCTTCTGTATCTGCTCCTGCTCCACGCTGGGATCTTCAGCCGCCGCTACGGCCCTGGTTATTGGGATACCGACTATGGCATGGGCGGAGGAACTGCAGTTCCTGGAGAGCCTCCCAAGGGAACTGCCGGGACCAGGGTGGTTTAGAACAGATGGTTGTTATGTATGATATCAGTTGGTTTGTTTTTCTCTTGCTTTGTTTTCGTGCAAGGACACACAGTTTCTGGTTCTGTCATCTCTTTCAAAACCTCAATGTAGCATGTTTAATAAGAGATTGGTATGTTTCACAATGAAACAAGGATATGAACAGACCAACACTAAACCAATATATGTAACCAATAATGAACTGCCATTTTCATAACAAGAAGATGAGCCTATAGAACACTAATTAATAAAAATGCAAAACGCCGTTGAAGGCGGTTGCAACACTTGCTGAAGTCTAGAAGGATTGAGAAATAGAATTACCTGCG

Coding sequence (CDS)

ATGGCTCAAACCATGGGAAGGAACATGGCAGCTCCATTGCTGTTTCTCAACTTGATCATGTATTTTATCCTCCTTGGGTTTGCTAGTTGGTGTATTAATAGATACATCAATGGCACAACCTACCATCCTAGTATGGGAGGCTCGCTCACGCCGTTTTTCTTGACATTTGCAATGCTAACAGCAGTTATGGGAGTGGCATCAAAACTGGCTGGACTCTACCATATCAGAGCTTGGAGGAGCGACAGCCTCGCCGGCGCAGGATCAACTTCATTGCTCACTTGGGCTGTAACTGTTCTAGCTTTTGGCCTGGCCTGCAAGCAAATCAGCATAGGAGGCCACAGAGGGTGGAGGCTGAGAGTTGTGGAAGCTTTCATAATAATATTGACCATCACCCAGCTTCTGTATCTGCTCCTGCTCCACGCTGGGATCTTCAGCCGCCGCTACGGCCCTGGTTATTGGGATACCGACTATGGCATGGGCGGAGGAACTGCAGTTCCTGGAGAGCCTCCCAAGGGAACTGCCGGGACCAGGGTGGTTTAG

Protein sequence

MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGSLTPFFLTFAMLTAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLRVVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAVPGEPPKGTAGTRVV

Homology

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BLAST of CmaCh17G001300 vs. TrEMBL
Match: A0A0A0LI45_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G169790 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 4.7e-90
Identity = 168/180 (93.33%), Postives = 174/180 (96.67%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGS-LTPFFLTFAML 60
           MAQTMGRNMAAPLLFLNLIMY ILLGFASWC+NR+INGTTYHPSMGG+  TPFFLTFAML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYLILLGFASWCLNRFINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
           TAV+G+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQI+IGGHRGWRLR
Sbjct: 61  TAVLGIASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAVPGEPPKGTAGTRVV 180
           VVEAFIIILT TQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTA PGEPPKGT GTRVV
Sbjct: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTTGTRVV 180

[Close]

BLAST of CmaCh17G001300 vs. TrEMBL
Match: V4S0A7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006007mg PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 5.2e-65
Identity = 128/176 (72.73%), Postives = 146/176 (82.95%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGS-LTPFFLTFAML 60
           MAQT+GRN+AAPLLFLNLIMY I++GFASWC+NR+ING T HPS GG+  T FFLTFA+L
Sbjct: 1   MAQTVGRNIAAPLLFLNLIMYLIVVGFASWCLNRFINGQTNHPSFGGNGATMFFLTFALL 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
             V+GVASK  G  HIRAWRSDSLA AGSTSL+ WA+T +AFGLACK+I++G HRGWRLR
Sbjct: 61  AGVLGVASKFIGGNHIRAWRSDSLAAAGSTSLIAWAITAIAFGLACKEINLGQHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAVPGEPPKGTAG 176
           +VEAFIIILT TQ LYLLLLHAG FS RYGPGY DTDYG+G G +V    PKG  G
Sbjct: 121 MVEAFIIILTFTQFLYLLLLHAGTFSSRYGPGYRDTDYGIGAGPSVDPAGPKGVVG 176

[Close]

BLAST of CmaCh17G001300 vs. TrEMBL
Match: A0A0B2RXU3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_016934 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.2e-64
Identity = 130/180 (72.22%), Postives = 150/180 (83.33%), Query Frame = 1


Query: 4   TMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGS-LTPFFLTFAMLTAV 63
           T+GRN+AAPLLFLNLIMYFI+LGFASWC+NR+ING TYHPS GG+  T FFLTF++L AV
Sbjct: 3   TVGRNVAAPLLFLNLIMYFIVLGFASWCLNRFINGQTYHPSFGGNGATMFFLTFSILAAV 62

Query: 64  MGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLRVVE 123
           +G+ SKL G  H+R WRSDSLA AG+TS++ WAVT LAFGLACKQI +GGHRGWRLRVVE
Sbjct: 63  LGIVSKLLGGNHMRTWRSDSLASAGATSMVAWAVTALAFGLACKQIHLGGHRGWRLRVVE 122

Query: 124 AFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDY----GMGGGTAVPGEPPKGTAGTRV 179
           AFIIILT TQLLYL+L+HAG++S RYGPGY DTDY    G+GG T  P   P  TAGTRV
Sbjct: 123 AFIIILTFTQLLYLILIHAGLYSSRYGPGYHDTDYGHGHGVGGTTGDPMHKP-ATAGTRV 181

[Close]

BLAST of CmaCh17G001300 vs. TrEMBL
Match: Q39872_SOYBN (PGmPM3 OS=Glycine max GN=GmPM3 PE=2 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.2e-64
Identity = 130/180 (72.22%), Postives = 150/180 (83.33%), Query Frame = 1


Query: 4   TMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGS-LTPFFLTFAMLTAV 63
           T+GRN+AAPLLFLNLIMYFI+LGFASWC+NR+ING TYHPS GG+  T FFLTF++L AV
Sbjct: 3   TVGRNVAAPLLFLNLIMYFIVLGFASWCLNRFINGQTYHPSFGGNGATMFFLTFSILAAV 62

Query: 64  MGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLRVVE 123
           +G+ SKL G  H+R WRSDSLA AG+TS++ WAVT LAFGLACKQI +GGHRGWRLRVVE
Sbjct: 63  LGIVSKLLGGNHMRTWRSDSLASAGATSMVAWAVTALAFGLACKQIHLGGHRGWRLRVVE 122

Query: 124 AFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDY----GMGGGTAVPGEPPKGTAGTRV 179
           AFIIILT TQLLYL+L+HAG++S RYGPGY DTDY    G+GG T  P   P  TAGTRV
Sbjct: 123 AFIIILTFTQLLYLILIHAGLYSSRYGPGYHDTDYGHGHGVGGTTGDPMHKP-ATAGTRV 181

[Close]

BLAST of CmaCh17G001300 vs. TrEMBL
Match: A0A068TSW8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00026453001 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 2.6e-64
Identity = 125/176 (71.02%), Postives = 150/176 (85.23%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGS-LTPFFLTFAML 60
           MA+T+GR++AAPLLFLNLIMYFI+LGFASWC+N YING T HPS GG+  TPFFLTFA+L
Sbjct: 1   MARTVGRSLAAPLLFLNLIMYFIVLGFASWCLNHYINGQTNHPSFGGNGATPFFLTFAIL 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
            +V+G+ASKLAG  H+RAWRSDSLA AG++SL+ WAVT+LAFGLACK+I++GG RGWRL+
Sbjct: 61  ASVLGIASKLAGGNHLRAWRSDSLAAAGASSLVAWAVTILAFGLACKEINVGGRRGWRLK 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAVPGEPPKGTAG 176
           V+E FII L  TQLLY+LL+HAG+FS RYGPGY D DYG+G     PG  PKGTAG
Sbjct: 121 VLEGFIIALGATQLLYVLLIHAGMFSSRYGPGYRDPDYGLG----APGAEPKGTAG 172

[Close]

BLAST of CmaCh17G001300 vs. TAIR10
Match: AT1G04560.1 (AT1G04560.1 AWPM-19-like family protein)

HSP 1 Score: 235.0 bits (598), Expect = 3.7e-62
Identity = 122/186 (65.59%), Postives = 145/186 (77.96%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGS-LTPFFLTFAML 60
           MA T+GRN+AAPLLFLNL+MY I+LGFASWC+N+YING T HPS GG+  TPFFLTF++L
Sbjct: 1   MATTVGRNIAAPLLFLNLVMYLIVLGFASWCLNKYINGQTNHPSFGGNGATPFFLTFSIL 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
            AV+GVASKLAG  HIR WR+DSLA AG++S++ WA+T LA GLACKQI+IGG RGWRL+
Sbjct: 61  AAVVGVASKLAGANHIRFWRNDSLAAAGASSIVAWAITALAMGLACKQINIGGWRGWRLK 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMG---GGTAVP---GEPPKGT 180
           ++EAFIIILT TQLLYL+L+HAG  S +YGPGY D DY  G   G   VP   GE   G 
Sbjct: 121 MIEAFIIILTFTQLLYLMLIHAGSLSSKYGPGYRDQDYATGQAHGHGHVPHTVGEHKAGV 180

[Close]

BLAST of CmaCh17G001300 vs. TAIR10
Match: AT1G29520.1 (AT1G29520.1 AWPM-19-like family protein)

HSP 1 Score: 104.4 bits (259), Expect = 7.6e-23
Identity = 63/155 (40.65%), Postives = 90/155 (58.06%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYIN---------------GTTYHPSM 60
           MA    + +A+ LL LN  MY I+LG   W +NR I+                  Y P M
Sbjct: 1   MAGEQIKPVASGLLVLNFCMYVIVLGIGGWAMNRAIDHGFEVGPNLELPAHFSPIYFP-M 60

Query: 61  GGSLTPFFLTFAMLTAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLAC 120
           G + T FF+ FA+L  V+G AS ++GL HIR+W   SL  A + + + W +TVLA G A 
Sbjct: 61  GNAATGFFVIFALLAGVVGAASTISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAW 120

Query: 121 KQISIGGHRGWRLRVVEAFIIILTITQLLYLLLLH 141
           K+I + G R  +LR +EAF+IIL++TQL+Y+  +H
Sbjct: 121 KEIELQG-RNAKLRTMEAFLIILSVTQLIYIAAVH 153

[Close]

BLAST of CmaCh17G001300 vs. TAIR10
Match: AT5G46530.1 (AT5G46530.1 AWPM-19-like family protein)

HSP 1 Score: 103.6 bits (257), Expect = 1.3e-22
Identity = 60/154 (38.96%), Postives = 92/154 (59.74%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYIN-----GTTY---------HPSMG 60
           M +   + +A+ LL LN  MY I+LG  +W +N+ IN     G  Y         H  MG
Sbjct: 1   MVEHQMKPVASFLLVLNFCMYAIVLGIGAWSMNKAINHGFLIGADYSLPAHFSPIHFPMG 60

Query: 61  GSLTPFFLTFAMLTAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACK 120
            + T FF+ FA++  V G AS ++G+ H+++W + SL  A S + + W++T+LA G  CK
Sbjct: 61  NAATGFFIMFALIAGVAGAASVISGISHLQSWTTTSLPAAVSAATIAWSLTLLAMGFGCK 120

Query: 121 QISIGGHRGWRLRVVEAFIIILTITQLLYLLLLH 141
           +I + G R  RLR +EAF+IIL+ TQLLY+  ++
Sbjct: 121 EIEL-GMRNARLRTMEAFLIILSATQLLYIAAIY 153

[Close]

BLAST of CmaCh17G001300 vs. TAIR10
Match: AT5G18970.1 (AT5G18970.1 AWPM-19-like family protein)

HSP 1 Score: 93.2 bits (230), Expect = 1.7e-19
Identity = 57/157 (36.31%), Postives = 88/157 (56.05%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPS--------------MG 60
           MA    ++ A  LL LNL +YF++   ASW +N  I  T    S              +G
Sbjct: 1   MASGGSKSAAFMLLMLNLGLYFVITIIASWAVNHGIERTRESASTLSLPAKIFPIYFPVG 60

Query: 61  GSLTPFFLTFAMLTAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACK 120
              T FF+ F ++  V+G+A+ L G+ ++  W S +L  A ++SL++W++T+LA GLACK
Sbjct: 61  NMATGFFVIFTLIAGVVGMATSLTGIINVLQWDSPNLHSAAASSLISWSLTLLAMGLACK 120

Query: 121 QISIGGHRGWRLRVVEAFIIILTITQLLYLLLLHAGI 144
           +I+IG      LR +E   II++ TQLL    +HAG+
Sbjct: 121 EINIGWTEA-NLRTLEVLTIIVSATQLLCTGAIHAGV 156

[Close]

BLAST of CmaCh17G001300 vs. NCBI nr
Match: gi|659121514|ref|XP_008460698.1| (PREDICTED: uncharacterized protein LOC103499466 [Cucumis melo])

HSP 1 Score: 340.1 bits (871), Expect = 2.3e-90
Identity = 169/180 (93.89%), Postives = 175/180 (97.22%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGS-LTPFFLTFAML 60
           MAQTMGRNMAAPLLFLNLIMY ILLGFASWC+NR+INGTTYHPSMGG+  TPFFLTFAML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYLILLGFASWCLNRFINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
           TAV+G+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQI+IGGHRGWRLR
Sbjct: 61  TAVLGIASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAVPGEPPKGTAGTRVV 180
           VVEAFIIILT TQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTA PGEPPKGTAGTRVV
Sbjct: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV 180

[Close]

BLAST of CmaCh17G001300 vs. NCBI nr
Match: gi|449458914|ref|XP_004147191.1| (PREDICTED: uncharacterized protein LOC101215543 [Cucumis sativus])

HSP 1 Score: 338.6 bits (867), Expect = 6.8e-90
Identity = 168/180 (93.33%), Postives = 174/180 (96.67%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGS-LTPFFLTFAML 60
           MAQTMGRNMAAPLLFLNLIMY ILLGFASWC+NR+INGTTYHPSMGG+  TPFFLTFAML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYLILLGFASWCLNRFINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
           TAV+G+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQI+IGGHRGWRLR
Sbjct: 61  TAVLGIASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAVPGEPPKGTAGTRVV 180
           VVEAFIIILT TQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTA PGEPPKGT GTRVV
Sbjct: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTTGTRVV 180

[Close]

BLAST of CmaCh17G001300 vs. NCBI nr
Match: gi|568853146|ref|XP_006480228.1| (PREDICTED: uncharacterized protein LOC102609870 [Citrus sinensis])

HSP 1 Score: 255.8 bits (652), Expect = 5.8e-65
Identity = 129/176 (73.30%), Postives = 146/176 (82.95%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGS-LTPFFLTFAML 60
           MAQT+GRN+AAPLLFLNLIMY I++GFASWC+NR+ING T HPS GG+  T FFLTFA+L
Sbjct: 1   MAQTVGRNIAAPLLFLNLIMYLIVVGFASWCLNRFINGQTNHPSFGGNGATMFFLTFALL 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
             V+GVASK  G  HIRAWRSDSLA AGSTSL+ WA+T LAFGLACK+I++G HRGWRLR
Sbjct: 61  AGVLGVASKFIGGNHIRAWRSDSLAAAGSTSLIAWAITALAFGLACKEINLGQHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAVPGEPPKGTAG 176
           VVEAFIIILT TQ LYLLLLHA +FS RYGPGY DTDYG+G G +V    PKG  G
Sbjct: 121 VVEAFIIILTFTQFLYLLLLHASMFSSRYGPGYRDTDYGIGAGPSVDPAGPKGVGG 176

[Close]

BLAST of CmaCh17G001300 vs. NCBI nr
Match: gi|567854545|ref|XP_006420392.1| (hypothetical protein CICLE_v10006007mg [Citrus clementina])

HSP 1 Score: 255.4 bits (651), Expect = 7.5e-65
Identity = 128/176 (72.73%), Postives = 146/176 (82.95%), Query Frame = 1


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGS-LTPFFLTFAML 60
           MAQT+GRN+AAPLLFLNLIMY I++GFASWC+NR+ING T HPS GG+  T FFLTFA+L
Sbjct: 1   MAQTVGRNIAAPLLFLNLIMYLIVVGFASWCLNRFINGQTNHPSFGGNGATMFFLTFALL 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
             V+GVASK  G  HIRAWRSDSLA AGSTSL+ WA+T +AFGLACK+I++G HRGWRLR
Sbjct: 61  AGVLGVASKFIGGNHIRAWRSDSLAAAGSTSLIAWAITAIAFGLACKEINLGQHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAVPGEPPKGTAG 176
           +VEAFIIILT TQ LYLLLLHAG FS RYGPGY DTDYG+G G +V    PKG  G
Sbjct: 121 MVEAFIIILTFTQFLYLLLLHAGTFSSRYGPGYRDTDYGIGAGPSVDPAGPKGVVG 176

[Close]

BLAST of CmaCh17G001300 vs. NCBI nr
Match: gi|351734490|ref|NP_001238105.1| (maturation protein PM3 [Glycine max])

HSP 1 Score: 254.2 bits (648), Expect = 1.7e-64
Identity = 130/180 (72.22%), Postives = 150/180 (83.33%), Query Frame = 1


Query: 4   TMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGS-LTPFFLTFAMLTAV 63
           T+GRN+AAPLLFLNLIMYFI+LGFASWC+NR+ING TYHPS GG+  T FFLTF++L AV
Sbjct: 3   TVGRNVAAPLLFLNLIMYFIVLGFASWCLNRFINGQTYHPSFGGNGATMFFLTFSILAAV 62

Query: 64  MGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLRVVE 123
           +G+ SKL G  H+R WRSDSLA AG+TS++ WAVT LAFGLACKQI +GGHRGWRLRVVE
Sbjct: 63  LGIVSKLLGGNHMRTWRSDSLASAGATSMVAWAVTALAFGLACKQIHLGGHRGWRLRVVE 122

Query: 124 AFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDY----GMGGGTAVPGEPPKGTAGTRV 179
           AFIIILT TQLLYL+L+HAG++S RYGPGY DTDY    G+GG T  P   P  TAGTRV
Sbjct: 123 AFIIILTFTQLLYLILIHAGLYSSRYGPGYHDTDYGHGHGVGGTTGDPMHKP-ATAGTRV 181

The following BLAST results are available for this feature:

BLAST of CmaCh17G001300 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh17G001300 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LI45_CUCSA	4.7e-90	93.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G169790 PE=4 SV=1	[more]
V4S0A7_9ROSI	5.2e-65	72.73	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006007mg PE=4 SV=1	[more]
A0A0B2RXU3_GLYSO	1.2e-64	72.22	Uncharacterized protein OS=Glycine soja GN=glysoja_016934 PE=4 SV=1	[more]
Q39872_SOYBN	1.2e-64	72.22	PGmPM3 OS=Glycine max GN=GmPM3 PE=2 SV=1	[more]
A0A068TSW8_COFCA	2.6e-64	71.02	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00026453001 PE=4 SV=1	[more]

BLAST of CmaCh17G001300 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G04560.1	3.7e-62	65.59	AWPM-19-like family protein	[more]
AT1G29520.1	7.6e-23	40.65	AWPM-19-like family protein	[more]
AT5G46530.1	1.3e-22	38.96	AWPM-19-like family protein	[more]
AT5G18970.1	1.7e-19	36.31	AWPM-19-like family protein	[more]

BLAST of CmaCh17G001300 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121514\|ref\|XP_008460698.1\|	2.3e-90	93.89	PREDICTED: uncharacterized protein LOC103499466 [Cucumis melo]	[more]
gi\|449458914\|ref\|XP_004147191.1\|	6.8e-90	93.33	PREDICTED: uncharacterized protein LOC101215543 [Cucumis sativus]	[more]
gi\|568853146\|ref\|XP_006480228.1\|	5.8e-65	73.30	PREDICTED: uncharacterized protein LOC102609870 [Citrus sinensis]	[more]
gi\|567854545\|ref\|XP_006420392.1\|	7.5e-65	72.73	hypothetical protein CICLE_v10006007mg [Citrus clementina]	[more]
gi\|351734490\|ref\|NP_001238105.1\|	1.7e-64	72.22	maturation protein PM3 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008390	AWPM-19

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G001300.1	CmaCh17G001300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008390	AWPM-19-like	PFAM	PF05512	AWPM-19	coord: 15..142 score: 9.5
None	No IPR available	PANTHER	PTHR33294	FAMILY NOT NAMED	coord: 1..163 score: 2.4E
None	No IPR available	PANTHER	PTHR33294:SF5	AWPM-19-LIKE FAMILY PROTEIN	coord: 1..163 score: 2.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh17G001300	Cucsa.383250	Cucumber (Gy14) v1	cgycmaB1055
CmaCh17G001300	Cla007624	Watermelon (97103) v1	cmawmB358
CmaCh17G001300	Csa2G169790	Cucumber (Chinese Long) v2	cmacuB350
CmaCh17G001300	MELO3C023049	Melon (DHL92) v3.5.1	cmameB338
CmaCh17G001300	ClCG06G007310	Watermelon (Charleston Gray)	cmawcgB328
CmaCh17G001300	CSPI02G09930	Wild cucumber (PI 183967)	cmacpiB354
CmaCh17G001300	CmoCh17G001330	Cucurbita moschata (Rifu)	cmacmoB353
CmaCh17G001300	Lsi09G011880	Bottle gourd (USVL1VR-Ls)	cmalsiB331
CmaCh17G001300	Cp4.1LG12g01210	Cucurbita pepo (Zucchini)	cmacpeB371
CmaCh17G001300	MELO3C023049.2	Melon (DHL92) v3.6.1	cmamedB394
CmaCh17G001300	CsaV3_2G012350	Cucumber (Chinese Long) v3	cmacucB0418
CmaCh17G001300	Cla97C06G117100	Watermelon (97103) v2	cmawmbB377
CmaCh17G001300	Bhi12G001345	Wax gourd	cmawgoB0468
CmaCh17G001300	CsGy2G010030	Cucumber (Gy14) v2	cgybcmaB193
CmaCh17G001300	Carg10116	Silver-seed gourd	carcmaB0314

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh17G001300	Cucurbita pepo (Zucchini)	cmacpeB388
CmaCh17G001300	Cucurbita pepo (Zucchini)	cmacpeB402
CmaCh17G001300	Cucurbita pepo (Zucchini)	cmacpeB407
CmaCh17G001300	Cucurbita pepo (Zucchini)	cmacpeB411
CmaCh17G001300	Bottle gourd (USVL1VR-Ls)	cmalsiB356
CmaCh17G001300	Cucumber (Gy14) v2	cgybcmaB345
CmaCh17G001300	Melon (DHL92) v3.6.1	cmamedB398
CmaCh17G001300	Silver-seed gourd	carcmaB0326
CmaCh17G001300	Silver-seed gourd	carcmaB1079
CmaCh17G001300	Silver-seed gourd	carcmaB1321
CmaCh17G001300	Silver-seed gourd	carcmaB1489
CmaCh17G001300	Cucumber (Chinese Long) v3	cmacucB0425
CmaCh17G001300	Watermelon (97103) v2	cmawmbB366
CmaCh17G001300	Wax gourd	cmawgoB0455
CmaCh17G001300	Cucurbita maxima (Rimu)	cmacmaB249
CmaCh17G001300	Cucurbita maxima (Rimu)	cmacmaB373
CmaCh17G001300	Cucurbita maxima (Rimu)	cmacmaB362
CmaCh17G001300	Cucurbita maxima (Rimu)	cmacmaB365
CmaCh17G001300	Cucurbita maxima (Rimu)	cmacmaB369
CmaCh17G001300	Cucumber (Gy14) v1	cgycmaB0715
CmaCh17G001300	Cucurbita moschata (Rifu)	cmacmoB350
CmaCh17G001300	Cucurbita moschata (Rifu)	cmacmoB359
CmaCh17G001300	Cucurbita moschata (Rifu)	cmacmoB362
CmaCh17G001300	Cucurbita moschata (Rifu)	cmacmoB365
CmaCh17G001300	Wild cucumber (PI 183967)	cmacpiB360
CmaCh17G001300	Cucumber (Chinese Long) v2	cmacuB356
CmaCh17G001300	Melon (DHL92) v3.5.1	cmameB343
CmaCh17G001300	Watermelon (Charleston Gray)	cmawcgB319
CmaCh17G001300	Watermelon (97103) v1	cmawmB344