Carg10116 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg10116
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	AWPM-19-like family protein
Location	Cucurbita_argyrosperma_scaffold_039 : 477669 .. 478947 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGATGGCTCAAACCATGGGAAGGAACATGGCAGCTCCATTGCTGTTTCTCAACTTGATCATGTATTTTATTCTGCTTGGGTTTGCTAGTTGGTGTATTAATAGATACATCAATGGCACAACCTACCATCCTAGTAAGTTTTGCTTTTCAAGGTTTGGAGTTATGTAATTCTTGGTGTCTTTTCAACCATTTTCTTTTTGATTATTTGATCATTTTCCGTCCTTGAGAATGTACCTAGCAAACTCATCGTTGGTAGATATTCGCCCTTTTTGGACTCGCTTCCGAGCTTAACTTCAAAGTTTTTAAAATGAAAAACGCTTATTTTAGGAAAACGCTCCCTAAGGTCTATAAAACCTTCTTCCAAGGATTCCAAGGAGTAAGGTATTTTCACACGCTTTTTCAAAGTTTTTTTTAGGATGCATCTGCTACGGGGAGATTTTAGGATGCTTTAAGATGTGTCTAGGAAGAGATTTTCCCGCACTTTTTTTTTTTTTTGAGGTCTTTAAAACATGTCTTCTGCGTGCTAGGGAGAGATTTTAGGACGCTTTAACACGTCTAGGAAGAGATTTTCACACGTTTTCCTCGTTAAAACACATTTGGTGGGGAGAGATTCTGTTTGTTCTTAGTGGGAAAAAAATGCAAAAGCTCTCTCTTAAACACAAATTGTCAGCTTTTACAAAAGCATGATTATGCTAATCATGACCTATGCTTGGATTGTTCGGCCTCATTATTTTTTTTTTAAACCCAAATAAGAGACATTGACGGTTGTTTTTGGACTGGACAAGGTATGGGAGGCAACGGAGCGACGCCATTTTTCTTGACATTTGCAATGCTAACAGCAGTTATGGGAGTGGCATCAAAACTGGCTGGACTCTACCATATCAGAGCTTGGAGGAGCGACAGCCTCGCCGGCGCAGGATCAACTTCATTGCTCACTTGGGCTGTAACTGTTCTAGCTTTTGGGTAACTTTCTACAACTTTCACAACCATTTCTCTTCTATTTAGAGAAGTAATTCTAAGATTCCTTTTCATTTCCCTTTCCGCAGCTTGGCCTGCAAGCAAATCAGCATAGGAGGCCACAGAGGGTGGAGGCTGAGAGTTGTGGAAGCTTTCATAATAATATTGACCATCACCCAGCTTCTGTATCTGCTCCTGCTCCACGCTGGGATCTTCAGCCGCCGCTACGGCCCTGGTTATTGGGATACCGACTACGGCATGGGCGGAGGAAGTGCAGTTCCTGGAGAGCCTCCTAAGGGAACTGCCGGGACCAGGGTGGTT

mRNA sequence

GAAGATGGCTCAAACCATGGGAAGGAACATGGCAGCTCCATTGCTGTTTCTCAACTTGATCATGTATTTTATTCTGCTTGGGTTTGCTAGTTGGTGTATTAATAGATACATCAATGGCACAACCTACCATCCTAGTATGGGAGGCAACGGAGCGACGCCATTTTTCTTGACATTTGCAATGCTAACAGCAGTTATGGGAGTGGCATCAAAACTGGCTGGACTCTACCATATCAGAGCTTGGAGGAGCGACAGCCTCGCCGGCGCAGGATCAACTTCATTGCTCACTTGGGCTGTAACTGTTCTAGCTTTTGGCTTGGCCTGCAAGCAAATCAGCATAGGAGGCCACAGAGGGTGGAGGCTGAGAGTTGTGGAAGCTTTCATAATAATATTGACCATCACCCAGCTTCTGTATCTGCTCCTGCTCCACGCTGGGATCTTCAGCCGCCGCTACGGCCCTGGTTATTGGGATACCGACTACGGCATGGGCGGAGGAAGTGCAGTTCCTGGAGAGCCTCCTAAGGGAACTGCCGGGACCAGGGTGGTT

Coding sequence (CDS)

ATGGCTCAAACCATGGGAAGGAACATGGCAGCTCCATTGCTGTTTCTCAACTTGATCATGTATTTTATTCTGCTTGGGTTTGCTAGTTGGTGTATTAATAGATACATCAATGGCACAACCTACCATCCTAGTATGGGAGGCAACGGAGCGACGCCATTTTTCTTGACATTTGCAATGCTAACAGCAGTTATGGGAGTGGCATCAAAACTGGCTGGACTCTACCATATCAGAGCTTGGAGGAGCGACAGCCTCGCCGGCGCAGGATCAACTTCATTGCTCACTTGGGCTGTAACTGTTCTAGCTTTTGGCTTGGCCTGCAAGCAAATCAGCATAGGAGGCCACAGAGGGTGGAGGCTGAGAGTTGTGGAAGCTTTCATAATAATATTGACCATCACCCAGCTTCTGTATCTGCTCCTGCTCCACGCTGGGATCTTCAGCCGCCGCTACGGCCCTGGTTATTGGGATACCGACTACGGCATGGGCGGAGGAAGTGCAGTTCCTGGAGAGCCTCCTAAGGGAACTGCCGGGACCAGGGTGGTT

Protein sequence

MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAMLTAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLRVVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV

Homology

[Close]

BLAST of Carg10116 vs. NCBI nr
Match: XP_023549469.1 (membrane protein PM19L [Cucurbita pepo subsp. pepo])

HSP 1 Score: 361.3 bits (926), Expect = 1.9e-96
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
           TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR
Sbjct: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV 180
           VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV
Sbjct: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV 180

[Close]

BLAST of Carg10116 vs. NCBI nr
Match: XP_022959288.1 (uncharacterized protein LOC111460317 [Cucurbita moschata])

HSP 1 Score: 360.1 bits (923), Expect = 4.2e-96
Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
           TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR
Sbjct: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV 180
           VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGG+AVPGEPPKGTAGTRVV
Sbjct: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAVPGEPPKGTAGTRVV 180

[Close]

BLAST of Carg10116 vs. NCBI nr
Match: XP_008460698.1 (PREDICTED: uncharacterized protein LOC103499466 [Cucumis melo])

HSP 1 Score: 349.7 bits (896), Expect = 5.7e-93
Identity = 171/180 (95.00%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQTMGRNMAAPLLFLNLIMY ILLGFASWC+NR+INGTTYHPSMGGNGATPFFLTFAML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYLILLGFASWCLNRFINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
           TAV+G+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQI+IGGHRGWRLR
Sbjct: 61  TAVLGIASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV 180
           VVEAFIIILT TQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGG+A PGEPPKGTAGTRVV
Sbjct: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV 180

[Close]

BLAST of Carg10116 vs. NCBI nr
Match: XP_004147191.1 (PREDICTED: uncharacterized protein LOC101215543 [Cucumis sativus] >KGN61555.1 hypothetical protein Csa_2G169790 [Cucumis sativus])

HSP 1 Score: 348.2 bits (892), Expect = 1.7e-92
Identity = 170/180 (94.44%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQTMGRNMAAPLLFLNLIMY ILLGFASWC+NR+INGTTYHPSMGGNGATPFFLTFAML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYLILLGFASWCLNRFINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
           TAV+G+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQI+IGGHRGWRLR
Sbjct: 61  TAVLGIASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV 180
           VVEAFIIILT TQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGG+A PGEPPKGT GTRVV
Sbjct: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTTGTRVV 180

[Close]

BLAST of Carg10116 vs. NCBI nr
Match: XP_022138583.1 (uncharacterized protein LOC111009705 [Momordica charantia])

HSP 1 Score: 328.6 bits (841), Expect = 1.4e-86
Identity = 163/180 (90.56%), Postives = 173/180 (96.11%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQTMGRNMAAPLLFLNLIMYFIL+GFASWC+NRYINGTTYHPSMGGNGATPFFLTFAML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYFILIGFASWCLNRYINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
           TAV+GVASKLAGLYHIRAWRSDSLAGAGS S++TWAVTVLAFGLACK+ISIGGHRGWRLR
Sbjct: 61  TAVLGVASKLAGLYHIRAWRSDSLAGAGSASIITWAVTVLAFGLACKEISIGGHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV 180
           VVEAFIIIL +TQLLY+LLLHAGIFSR YGPGY +TDYGMGGG+A  GE PKGTAGTRVV
Sbjct: 121 VVEAFIIILAVTQLLYILLLHAGIFSREYGPGYRETDYGMGGGTAA-GEVPKGTAGTRVV 179

[Close]

BLAST of Carg10116 vs. TAIR10
Match: AT1G04560.1 (AWPM-19-like family protein)

HSP 1 Score: 246.9 bits (629), Expect = 9.5e-66
Identity = 125/186 (67.20%), Postives = 147/186 (79.03%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MA T+GRN+AAPLLFLNL+MY I+LGFASWC+N+YING T HPS GGNGATPFFLTF++L
Sbjct: 1   MATTVGRNIAAPLLFLNLVMYLIVLGFASWCLNKYINGQTNHPSFGGNGATPFFLTFSIL 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
            AV+GVASKLAG  HIR WR+DSLA AG++S++ WA+T LA GLACKQI+IGG RGWRL+
Sbjct: 61  AAVVGVASKLAGANHIRFWRNDSLAAAGASSIVAWAITALAMGLACKQINIGGWRGWRLK 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMG---GGSAVP---GEPPKGT 180
           ++EAFIIILT TQLLYL+L+HAG  S +YGPGY D DY  G   G   VP   GE   G 
Sbjct: 121 MIEAFIIILTFTQLLYLMLIHAGSLSSKYGPGYRDQDYATGQAHGHGHVPHTVGEHKAGV 180

[Close]

BLAST of Carg10116 vs. TAIR10
Match: AT1G29520.1 (AWPM-19-like family protein)

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-23
Identity = 64/154 (41.56%), Postives = 92/154 (59.74%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYI-NGTTYHPSMG------------G 60
           MA    + +A+ LL LN  MY I+LG   W +NR I +G    P++             G
Sbjct: 1   MAGEQIKPVASGLLVLNFCMYVIVLGIGGWAMNRAIDHGFEVGPNLELPAHFSPIYFPMG 60

Query: 61  NGATPFFLTFAMLTAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACK 120
           N AT FF+ FA+L  V+G AS ++GL HIR+W   SL  A + + + W +TVLA G A K
Sbjct: 61  NAATGFFVIFALLAGVVGAASTISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAWK 120

Query: 121 QISIGGHRGWRLRVVEAFIIILTITQLLYLLLLH 142
           +I + G R  +LR +EAF+IIL++TQL+Y+  +H
Sbjct: 121 EIELQG-RNAKLRTMEAFLIILSVTQLIYIAAVH 153

[Close]

BLAST of Carg10116 vs. TAIR10
Match: AT5G18970.1 (AWPM-19-like family protein)

HSP 1 Score: 95.5 bits (236), Expect = 3.5e-20
Identity = 59/157 (37.58%), Postives = 89/157 (56.69%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSM-------------GG 60
           MA    ++ A  LL LNL +YF++   ASW +N  I  T    S               G
Sbjct: 1   MASGGSKSAAFMLLMLNLGLYFVITIIASWAVNHGIERTRESASTLSLPAKIFPIYFPVG 60

Query: 61  NGATPFFLTFAMLTAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACK 120
           N AT FF+ F ++  V+G+A+ L G+ ++  W S +L  A ++SL++W++T+LA GLACK
Sbjct: 61  NMATGFFVIFTLIAGVVGMATSLTGIINVLQWDSPNLHSAAASSLISWSLTLLAMGLACK 120

Query: 121 QISIGGHRGWRLRVVEAFIIILTITQLLYLLLLHAGI 145
           +I+IG      LR +E   II++ TQLL    +HAG+
Sbjct: 121 EINIGWTEA-NLRTLEVLTIIVSATQLLCTGAIHAGV 156

[Close]

BLAST of Carg10116 vs. TAIR10
Match: AT5G46530.1 (AWPM-19-like family protein)

HSP 1 Score: 86.3 bits (212), Expect = 2.1e-17
Identity = 57/155 (36.77%), Postives = 83/155 (53.55%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYIN-----GTTY---------HPSMG 60
           M +   + +A+ LL LN  MY I+LG  +W +N+ IN     G  Y         H  M 
Sbjct: 1   MVEHQMKPVASFLLVLNFCMYAIVLGIGAWSMNKAINHGFLIGADYSLPAHFSPIHFPM- 60

Query: 61  GNGATPFFLTFAMLTAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLAC 120
           GN AT FF+ FA                H+++W + SL  A S + + W++T+LA G  C
Sbjct: 61  GNAATGFFIMFAXXXXXXXXXXXXXXXXHLQSWTTTSLPAAVSAATIAWSLTLLAMGFGC 120

Query: 121 KQISIGGHRGWRLRVVEAFIIILTITQLLYLLLLH 142
           K+I + G R  RLR +EAF+IIL+ TQLLY+  ++
Sbjct: 121 KEIEL-GMRNARLRTMEAFLIILSATQLLYIAAIY 153

[Close]

BLAST of Carg10116 vs. Swiss-Prot
Match: sp|Q6L4D2|PM19L_ORYSJ (Membrane protein PM19L OS=Oryza sativa subsp. japonica OX=39947 GN=PM19L PE=2 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 7.7e-49
Identity = 94/156 (60.26%), Postives = 121/156 (77.56%), Query Frame = 0


Query: 5   MGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAMLTAVM 64
           +GR M APLL LNLIMY I++GFASW +N YING T HP + GNGAT +FL FA+L  V+
Sbjct: 4   VGRTMIAPLLVLNLIMYLIVIGFASWNLNHYINGETNHPGVAGNGATFYFLVFAILAGVV 63

Query: 65  GVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLRVVEA 124
           G ASKLAG++H+R+W + SLA   +++L+ WA+T LAFGLACK+I IGG+RGWRLRV+EA
Sbjct: 64  GAASKLAGVHHVRSWGAHSLAAGAASALIAWAITALAFGLACKEIHIGGYRGWRLRVLEA 123

Query: 125 FIIILTITQLLYLLLLHAGIFSRRY--GPGYWDTDY 159
           F+IIL  TQLLY+ +LH G+FS  +  G G +  DY
Sbjct: 124 FVIILAFTQLLYVAMLHGGLFSGNHAAGAGGYGGDY 159

[Close]

BLAST of Carg10116 vs. TrEMBL
Match: tr|A0A1S3CDH8|A0A1S3CDH8_CUCME (uncharacterized protein LOC103499466 OS=Cucumis melo OX=3656 GN=LOC103499466 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 3.8e-93
Identity = 171/180 (95.00%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQTMGRNMAAPLLFLNLIMY ILLGFASWC+NR+INGTTYHPSMGGNGATPFFLTFAML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYLILLGFASWCLNRFINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
           TAV+G+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQI+IGGHRGWRLR
Sbjct: 61  TAVLGIASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV 180
           VVEAFIIILT TQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGG+A PGEPPKGTAGTRVV
Sbjct: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTAGTRVV 180

[Close]

BLAST of Carg10116 vs. TrEMBL
Match: tr|A0A0A0LI45|A0A0A0LI45_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G169790 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 1.1e-92
Identity = 170/180 (94.44%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQTMGRNMAAPLLFLNLIMY ILLGFASWC+NR+INGTTYHPSMGGNGATPFFLTFAML
Sbjct: 1   MAQTMGRNMAAPLLFLNLIMYLILLGFASWCLNRFINGTTYHPSMGGNGATPFFLTFAML 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
           TAV+G+ASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQI+IGGHRGWRLR
Sbjct: 61  TAVLGIASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQINIGGHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAGTRVV 180
           VVEAFIIILT TQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGG+A PGEPPKGT GTRVV
Sbjct: 121 VVEAFIIILTFTQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGTAAPGEPPKGTTGTRVV 180

[Close]

BLAST of Carg10116 vs. TrEMBL
Match: tr|V4S0A7|V4S0A7_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10006007mg PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 4.2e-68
Identity = 131/176 (74.43%), Postives = 148/176 (84.09%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQT+GRN+AAPLLFLNLIMY I++GFASWC+NR+ING T HPS GGNGAT FFLTFA+L
Sbjct: 1   MAQTVGRNIAAPLLFLNLIMYLIVVGFASWCLNRFINGQTNHPSFGGNGATMFFLTFALL 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
             V+GVASK  G  HIRAWRSDSLA AGSTSL+ WA+T +AFGLACK+I++G HRGWRLR
Sbjct: 61  AGVLGVASKFIGGNHIRAWRSDSLAAAGSTSLIAWAITAIAFGLACKEINLGQHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAG 177
           +VEAFIIILT TQ LYLLLLHAG FS RYGPGY DTDYG+G G +V    PKG  G
Sbjct: 121 MVEAFIIILTFTQFLYLLLLHAGTFSSRYGPGYRDTDYGIGAGPSVDPAGPKGVVG 176

[Close]

BLAST of Carg10116 vs. TrEMBL
Match: tr|A0A2H5P2J2|A0A2H5P2J2_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_098260 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 4.2e-68
Identity = 131/176 (74.43%), Postives = 148/176 (84.09%), Query Frame = 0


Query: 1   MAQTMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAML 60
           MAQT+GRN+AAPLLFLNLIMY I++GFASWC+NR+ING T HPS GGNGAT FFLTFA+L
Sbjct: 1   MAQTVGRNIAAPLLFLNLIMYLIVVGFASWCLNRFINGQTNHPSFGGNGATMFFLTFALL 60

Query: 61  TAVMGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLR 120
             V+GVASK  G  HIRAWRSDSLA AGSTSL+ WA+T +AFGLACK+I++G HRGWRLR
Sbjct: 61  AGVLGVASKFIGGNHIRAWRSDSLAAAGSTSLIAWAITAIAFGLACKEINLGQHRGWRLR 120

Query: 121 VVEAFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGGSAVPGEPPKGTAG 177
           +VEAFIIILT TQ LYLLLLHAG FS RYGPGY DTDYG+G G +V    PKG  G
Sbjct: 121 MVEAFIIILTFTQFLYLLLLHAGTFSSRYGPGYRDTDYGIGAGPSVDPAGPKGVVG 176

[Close]

BLAST of Carg10116 vs. TrEMBL
Match: tr|Q39872|Q39872_SOYBN (PGmPM3 OS=Glycine max OX=3847 GN=GmPM3 PE=2 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 9.4e-68
Identity = 132/179 (73.74%), Postives = 151/179 (84.36%), Query Frame = 0


Query: 4   TMGRNMAAPLLFLNLIMYFILLGFASWCINRYINGTTYHPSMGGNGATPFFLTFAMLTAV 63
           T+GRN+AAPLLFLNLIMYFI+LGFASWC+NR+ING TYHPS GGNGAT FFLTF++L AV
Sbjct: 3   TVGRNVAAPLLFLNLIMYFIVLGFASWCLNRFINGQTYHPSFGGNGATMFFLTFSILAAV 62

Query: 64  MGVASKLAGLYHIRAWRSDSLAGAGSTSLLTWAVTVLAFGLACKQISIGGHRGWRLRVVE 123
           +G+ SKL G  H+R WRSDSLA AG+TS++ WAVT LAFGLACKQI +GGHRGWRLRVVE
Sbjct: 63  LGIVSKLLGGNHMRTWRSDSLASAGATSMVAWAVTALAFGLACKQIHLGGHRGWRLRVVE 122

Query: 124 AFIIILTITQLLYLLLLHAGIFSRRYGPGYWDTDYGMGGG-SAVPGEP--PKGTAGTRV 180
           AFIIILT TQLLYL+L+HAG++S RYGPGY DTDYG G G     G+P     TAGTRV
Sbjct: 123 AFIIILTFTQLLYLILIHAGLYSSRYGPGYHDTDYGHGHGVGGTTGDPMHKPATAGTRV 181

The following BLAST results are available for this feature:

BLAST of Carg10116 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023549469.1	1.9e-96	100.00	membrane protein PM19L [Cucurbita pepo subsp. pepo]	[more]
XP_022959288.1	4.2e-96	99.44	uncharacterized protein LOC111460317 [Cucurbita moschata]	[more]
XP_008460698.1	5.7e-93	95.00	PREDICTED: uncharacterized protein LOC103499466 [Cucumis melo]	[more]
XP_004147191.1	1.7e-92	94.44	PREDICTED: uncharacterized protein LOC101215543 [Cucumis sativus] >KGN61555.1 hy...	[more]
XP_022138583.1	1.4e-86	90.56	uncharacterized protein LOC111009705 [Momordica charantia]	[more]

BLAST of Carg10116 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G04560.1	9.5e-66	67.20	AWPM-19-like family protein	[more]
AT1G29520.1	1.5e-23	41.56	AWPM-19-like family protein	[more]
AT5G18970.1	3.5e-20	37.58	AWPM-19-like family protein	[more]
AT5G46530.1	2.1e-17	36.77	AWPM-19-like family protein	[more]

BLAST of Carg10116 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6L4D2\|PM19L_ORYSJ	7.7e-49	60.26	Membrane protein PM19L OS=Oryza sativa subsp. japonica OX=39947 GN=PM19L PE=2 SV...	[more]

BLAST of Carg10116 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CDH8\|A0A1S3CDH8_CUCME	3.8e-93	95.00	uncharacterized protein LOC103499466 OS=Cucumis melo OX=3656 GN=LOC103499466 PE=...	[more]
tr\|A0A0A0LI45\|A0A0A0LI45_CUCSA	1.1e-92	94.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G169790 PE=4 SV=1	[more]
tr\|V4S0A7\|V4S0A7_9ROSI	4.2e-68	74.43	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10006007mg PE=4 ...	[more]
tr\|A0A2H5P2J2\|A0A2H5P2J2_CITUN	4.2e-68	74.43	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_098260 PE=4 SV=1	[more]
tr\|Q39872\|Q39872_SOYBN	9.4e-68	73.74	PGmPM3 OS=Glycine max OX=3847 GN=GmPM3 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008390	AWPM-19

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10116-RA	Carg10116-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008390	AWPM-19-like	PFAM	PF05512	AWPM-19	coord: 15..143 e-value: 9.2E-51 score: 171.7
IPR008390	AWPM-19-like	PANTHER	PTHR33294	FAMILY NOT NAMED	coord: 1..164
None	No IPR available	PANTHER	PTHR33294:SF5	AWPM-19-LIKE FAMILY PROTEIN	coord: 1..164

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg10116	Cla007624	Watermelon (97103) v1	carwmB0219
Carg10116	Csa2G169790	Cucumber (Chinese Long) v2	carcuB0254
Carg10116	MELO3C023049	Melon (DHL92) v3.5.1	carmeB0233
Carg10116	ClCG06G007310	Watermelon (Charleston Gray)	carwcgB0221
Carg10116	CSPI02G09930	Wild cucumber (PI 183967)	carcpiB0259
Carg10116	Cucsa.383250	Cucumber (Gy14) v1	carcgyB0273
Carg10116	CmaCh17G001300	Cucurbita maxima (Rimu)	carcmaB0314
Carg10116	CmoCh17G001330	Cucurbita moschata (Rifu)	carcmoB0320
Carg10116	Lsi09G011880	Bottle gourd (USVL1VR-Ls)	carlsiB204
Carg10116	Cp4.1LG12g01210	Cucurbita pepo (Zucchini)	carcpeB0322
Carg10116	CsGy2G010030	Cucumber (Gy14) v2	carcgybB0243
Carg10116	MELO3C023049.2	Melon (DHL92) v3.6.1	carmedB0240
Carg10116	CsaV3_2G012350	Cucumber (Chinese Long) v3	carcucB0258
Carg10116	Cla97C06G117100	Watermelon (97103) v2	carwmbB0230

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg10116	Cucurbita pepo (Zucchini)	carcpeB0327
Carg10116	Silver-seed gourd	carcarB259
Carg10116	Silver-seed gourd	carcarB264
Carg10116	Silver-seed gourd	carcarB266
Carg10116	Silver-seed gourd	carcarB267
Carg10116	Cucumber (Gy14) v2	carcgybB0245
Carg10116	Cucumber (Gy14) v1	carcgyB0269
Carg10116	Cucurbita maxima (Rimu)	carcmaB0313
Carg10116	Cucurbita maxima (Rimu)	carcmaB0315
Carg10116	Cucurbita maxima (Rimu)	carcmaB0316
Carg10116	Cucurbita maxima (Rimu)	carcmaB0321
Carg10116	Cucurbita moschata (Rifu)	carcmoB0319
Carg10116	Cucurbita moschata (Rifu)	carcmoB0321
Carg10116	Cucurbita moschata (Rifu)	carcmoB0322
Carg10116	Cucurbita moschata (Rifu)	carcmoB0326
Carg10116	Cucurbita pepo (Zucchini)	carcpeB0323
Carg10116	Cucurbita pepo (Zucchini)	carcpeB0328
Carg10116	Cucurbita pepo (Zucchini)	carcpeB0329
Carg10116	Wild cucumber (PI 183967)	carcpiB0261
Carg10116	Cucumber (Chinese Long) v2	carcuB0256
Carg10116	Cucumber (Chinese Long) v3	carcucB0260
Carg10116	Bottle gourd (USVL1VR-Ls)	carlsiB206
Carg10116	Melon (DHL92) v3.5.1	carmeB0236
Carg10116	Melon (DHL92) v3.6.1	carmedB0243
Carg10116	Watermelon (Charleston Gray)	carwcgB0220
Carg10116	Watermelon (97103) v1	carwmB0218
Carg10116	Watermelon (97103) v2	carwmbB0229
Carg10116	Wax gourd	carwgoB0281
Carg10116	Wax gourd	carwgoB0282