CmoCh16G008380 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh16G008380
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Transmembrane protein, putative
Location	Cmo_Chr16 : 4405637 .. 4408213 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGAAACTCTTAAGAAACTGATTTAGTTTATAGCAGATGATATCAGAATATAAGTAACTGGCATCACAGAGGATCTTGGGCATCTTCTTCTTCCTCTTCCCTTGGCTTCTGTAAGTGCTTGCTTTTTGTTTATTATTCTCTTCTCATTCTTCTTTTAACACTTGCACATACACGGCCACCCCCACCCAAATGTGGGGAGCGCTCGATATCTTAATCATTGAAGCATGTAATGTAACAACTTAAGGCCACCGCTAGTAGAGCTTTCATACCCTTATAAAGGGTGTTTTGTTCTCCTCTCAATCGATGTGAGATCTCACAATTCATCTCCATTTGAGGCCAGTGTCCTCACTGGCACTCTGTTCCCTTCTCCGATCCATGGATCCATGTGGGACCCCCCAATCTACACCCTTTCGGGGCTCGGCGTCCTTGATGGCACACACCCCCCTTCGGGGCTAAGCCTCCTCGTTGGCATATCGCCCGGTGTCTGGACAGCCCAAGCCCACCGTAGCAGATATTGTCCTCTTTGGATTTTCCCTTTCAGGCTTCCCCTCAAGGTTTTTTAAAACGTGTCTGCTAGGAAGAGGTTTCCACACTCTTATAAAGAATGTTTCGTTCTACTCCCCAACCAAAACCGAAGTGGAATCTTACCTATAAGAATATGAAAAACAAAATATATTGGAAGTTCCTTCTTTTCTGCAGTTAGCTGAAGATCTAGAAAAGATAAGACAAAGACCCCTTCCCCCCACTTGACTCTATAAGGTGTGTGTGGTGTTGTTCCTTGTAGAATTGCCCTTATAAGATGTTTGCCCCTCTTGTATCAAAATTCGTGGCTCTGCCATGGGGATGGGATTCAAATAAGAATACTGAGAAAATCTGTTTCTTTTCAGAGCTAAGGGTCGTCAGCAGCAATACATTCTTATGTGGAAGCCATTTTCATCAGAATCAGTTTTTCTCCAAGCATTCAGTTGAAGAAGATTGAAACCACAGAGGTATGAGTGAGGTTGGTTCTGAAAGATCAGAGTCATGGAACATATACACGACTTCAGAGCAGAGCCCATCATCATCTCAAACAGGCATTGGTCAAGAAGCTCCATGGAAGAGCTTTGGATCCTCCATGAATGCCATTTCCTTTGGCTTTGTTGCCACTGCAATCTTGATATCAATGTTCCTTATCATGGCAATCTTTGAGCATCTGTTTAGACCAACATCTCCTTTCTCCTCATCTGAAGTGACCAACAACTCCGCAGAATCAGGTCCTGCCGAGAAATTCATAAGTCCTAATACGGTACGTCTCGACCTGGGTTGTTTATCTTTATGTTTTAAGTTTCTTGGCTTGTGGGATTTAGATTCTTGTAACTCTTCAGTGCTTTCCCCTTCACTTGAAATAAGTGTTTCAGTTGCTGAGACTTTAAACTACTTCATATCATTATAGAATAAGCCTTCTTCCCCCTGAACAGATTTGCTTAGAAGATCAGTTTAAGACAACTTAAAGCCAACTCTTCTCATCTAGAATAACTACAAGTATGCTTGTCTGAACCACTCTTTTACTTCATCAAACAGGACCATAGAAGCTAACATTCTTTAGGAAATCAAGTGTTTCGAGTCTAGAATAATTATAAATACGTTTATCTTTCATATCTCGGTACTTTCTAGAATATGCGGAGATATCTATAACAGTCATACATTTTTTTCACCCTTCATACTTTCTTCTTAGTGCCAAAACTCAGTGGTAGAAAATGATACCTCGAGACTTGAAAGTAGATATCTTTTTCTCCAGTACAAACCGGTATTGAAGTTGATTTGTATGCATCTTGATCGATCACACGACATAGAATCGTACCAGACTCGTTTCACCAGCAGCTTCATAAGCTTCATCTCTTGACAAAACCTACACAGAAAACAACTGTTATTTCCTAACTAGTTTTGTTACTACCAAATCTAAAAAATAACTGTTCTCTTTGTCTTCTTCAAGAACATCATCTTTTATCATAACAGTGACAAGACACAGAACATCGACACAAACCAGTACCCATCATTACAGAATACATGCTTTTCTTTTAAGGTCAAGTCAAGTCAAGTCATTGCACTGAACATTGGAAATGATATGGTTTTGTTTGTTGAGCTTGTGGTTTTTCTATGGCAGGTGCCAACATCATATGCGTCTGATTTCTCAGTGTTGATGCCAGGGCAGGACATCCCCACCTTCATTGCGCAACCAGCTCCTCTGCCATGCCAAAGAGAGAGGATTTATTGGCCATCTCATGACCATAATTTTTTAGGTCCTTGAGGCAAATATATGGTATTTCTTGCCACCATAGAAAGCAGTTACTGTATTTAGGAAAACTATCAGCTTTGCTTTTTCTCAGAATAATAATACTTTGTGCTTCTTCACCCACAGGGAGATTTGCCAAATGCTGATACTTTTTTGTTCCCAGTTTCTCATCTGTAAATTGATTATCAAAGAAGTCAGCAGTATTTACACGATTCTACTTGTTTGATAAAGATTTGAGATATAAGTAGAAATCACCTCACTTTTATGCTCATCATTTTAGGCTGATGGTGAATCTCCGCTTCTT

mRNA sequence

TTAGAAACTCTTAAGAAACTGATTTAGTTTATAGCAGATGATATCAGAATATAAGTAACTGGCATCACAGAGGATCTTGGGCATCTTCTTCTTCCTCTTCCCTTGGCTTCTAGCTAAGGGTCGTCAGCAGCAATACATTCTTATGTGGAAGCCATTTTCATCAGAATCAGTTTTTCTCCAAGCATTCAGTTGAAGAAGATTGAAACCACAGAGGTATGAGTGAGGTTGGTTCTGAAAGATCAGAGTCATGGAACATATACACGACTTCAGAGCAGAGCCCATCATCATCTCAAACAGGCATTGGTCAAGAAGCTCCATGGAAGAGCTTTGGATCCTCCATGAATGCCATTTCCTTTGGCTTTGTTGCCACTGCAATCTTGATATCAATGTTCCTTATCATGGCAATCTTTGAGCATCTGTTTAGACCAACATCTCCTTTCTCCTCATCTGAAGTGACCAACAACTCCGCAGAATCAGGTCCTGCCGAGAAATTCATAAGTCCTAATACGGTGCCAACATCATATGCGTCTGATTTCTCAGTGTTGATGCCAGGGCAGGACATCCCCACCTTCATTGCGCAACCAGCTCCTCTGCCATGCCAAAGAGAGAGGATTTATTGGCCATCTCATGACCATAATTTTTTAGGTCCTTGAGGCAAATATATGGTATTTCTTGCCACCATAGAAAGCAGTTACTGTATTTAGGAAAACTATCAGCTTTGCTTTTTCTCAGAATAATAATACTTTGTGCTTCTTCACCCACAGGGAGATTTGCCAAATGCTGATACTTTTTTGTTCCCAGTTTCTCATCTGTAAATTGATTATCAAAGAAGTCAGCAGTATTTACACGATTCTACTTGTTTGATAAAGATTTGAGATATAAGTAGAAATCACCTCACTTTTATGCTCATCATTTTAGGCTGATGGTGAATCTCCGCTTCTT

Coding sequence (CDS)

ATGAGTGAGGTTGGTTCTGAAAGATCAGAGTCATGGAACATATACACGACTTCAGAGCAGAGCCCATCATCATCTCAAACAGGCATTGGTCAAGAAGCTCCATGGAAGAGCTTTGGATCCTCCATGAATGCCATTTCCTTTGGCTTTGTTGCCACTGCAATCTTGATATCAATGTTCCTTATCATGGCAATCTTTGAGCATCTGTTTAGACCAACATCTCCTTTCTCCTCATCTGAAGTGACCAACAACTCCGCAGAATCAGGTCCTGCCGAGAAATTCATAAGTCCTAATACGGTGCCAACATCATATGCGTCTGATTTCTCAGTGTTGATGCCAGGGCAGGACATCCCCACCTTCATTGCGCAACCAGCTCCTCTGCCATGCCAAAGAGAGAGGATTTATTGGCCATCTCATGACCATAATTTTTTAGGTCCTTGA

Homology

[Close]

BLAST of CmoCh16G008380 vs. TrEMBL
Match: A0A0A0L6N7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110010 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.4e-63
Identity = 129/146 (88.36%), Postives = 136/146 (93.15%), Query Frame = 1


Query: 1   MSEVGSERSESWNIYTTSEQSPSSSQTGIGQEAPWKSFGSSMNAISFGFVATAILISMFL 60
           MSE+GSERS+SWNIYTT +QSPSS QTGIGQEAPWK+FGSSMNAISFGFVATAILISMFL
Sbjct: 1   MSEIGSERSKSWNIYTTPDQSPSS-QTGIGQEAPWKNFGSSMNAISFGFVATAILISMFL 60

Query: 61  IMAIFEHLFRPTSPFSSS-EVTNNSAESGPAEKFISPNTVPTSYASDFSVLMPGQDIPTF 120
           +MAIFEHLFRP+SPFSSS EVTNNS+ES PAEKF SPNTV TSYASDFSVLMPGQ IPTF
Sbjct: 61  VMAIFEHLFRPSSPFSSSDEVTNNSSESTPAEKFASPNTVSTSYASDFSVLMPGQHIPTF 120

Query: 121 IAQPAPLPCQRERIYWPSHDHNFLGP 146
           IAQPAPLPCQRE IYWPSH HNF GP
Sbjct: 121 IAQPAPLPCQREGIYWPSHRHNFSGP 145

[Close]

BLAST of CmoCh16G008380 vs. TrEMBL
Match: A9PAH3_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.8e-48
Identity = 103/147 (70.07%), Postives = 123/147 (83.67%), Query Frame = 1


Query: 1   MSEVGSERSESWNIYTTSEQSPSSSQTG-IGQEAPWKSFGSSMNAISFGFVATAILISMF 60
           MSE+GSERS+ WNIYT+S+ +PS  QTG I +EAPWKSFG+SMNAISFGFVATAILISMF
Sbjct: 1   MSELGSERSKPWNIYTSSDPAPS--QTGEIDREAPWKSFGTSMNAISFGFVATAILISMF 60

Query: 61  LIMAIFEHLFRPTSPFSS-SEVTNNSAESGPAEKFISPNTVPTSYASDFSVLMPGQDIPT 120
           LIMAIFEHLFRP   FS+  EVT+ S+ES P  K  +P TVP +YASDF+V+MPGQ +PT
Sbjct: 61  LIMAIFEHLFRPNPSFSTPQEVTDGSSESRPLHKLGNPQTVPAAYASDFAVVMPGQQLPT 120

Query: 121 FIAQPAPLPCQRERIYWPSHDHNFLGP 146
           +IAQPAPLPC RE+IYWP+H+ N + P
Sbjct: 121 YIAQPAPLPCPREKIYWPNHEQNLVFP 145

[Close]

BLAST of CmoCh16G008380 vs. TrEMBL
Match: A0A067LD68_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00242 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.0e-47
Identity = 102/142 (71.83%), Postives = 118/142 (83.10%), Query Frame = 1


Query: 1   MSEVGSERSESWNIYTTSEQSPSSSQTGIGQEAPWKSFGSSMNAISFGFVATAILISMFL 60
           M++ GSERS++WNIYT+S+ +PS +   I +EAPWKSFG+SMNAI+FGFVATAILISMFL
Sbjct: 1   MNDFGSERSKAWNIYTSSDPTPSETAV-IDKEAPWKSFGTSMNAIAFGFVATAILISMFL 60

Query: 61  IMAIFEHLFRPTSPFSS-SEVTNNSAESGPAEKFISPNTVPTSYASDFSVLMPGQDIPTF 120
           IMAIFEHLFRP   FSS  EVTN S ESG  +K  +P TV TSYASDFSV+MPGQ  PT+
Sbjct: 61  IMAIFEHLFRPNPSFSSPQEVTNRSLESGLVDKLGNPQTVATSYASDFSVVMPGQQYPTY 120

Query: 121 IAQPAPLPCQRERIYWPSHDHN 142
           IAQPAPLPCQRE IYWP+H HN
Sbjct: 121 IAQPAPLPCQREGIYWPAHQHN 141

[Close]

BLAST of CmoCh16G008380 vs. TrEMBL
Match: U7E2H8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0022s00590g PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.0e-47
Identity = 105/141 (74.47%), Postives = 119/141 (84.40%), Query Frame = 1


Query: 1   MSEVGSERSESWNIYTTSEQSPSSSQTG-IGQEAPWKSFGSSMNAISFGFVATAILISMF 60
           M+E+GSERS+ WNIYT+S+ +PS  QTG I +EAPWKSFG+SMNAISFGFVATAIL+SMF
Sbjct: 1   MNELGSERSKPWNIYTSSDPAPS--QTGVIDREAPWKSFGTSMNAISFGFVATAILVSMF 60

Query: 61  LIMAIFEHLFRPTSPFSS-SEVTNNSAESGPAEKFISPNTVPTSYASDFSVLMPGQDIPT 120
           LIMAIFEHLFRPT PFSS  EVTN SAES P  K  +P TVP +YASDFSV+MPGQ  PT
Sbjct: 61  LIMAIFEHLFRPTPPFSSPQEVTNGSAESRPLHKLRNPQTVPAAYASDFSVVMPGQQHPT 120

Query: 121 FIAQPAPLPCQRERIYWPSHD 140
            IAQPAPLPC RERI WP+H+
Sbjct: 121 CIAQPAPLPCPRERINWPAHE 139

[Close]

BLAST of CmoCh16G008380 vs. TrEMBL
Match: A0A061DY81_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_006161 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.4e-46
Identity = 100/145 (68.97%), Postives = 114/145 (78.62%), Query Frame = 1


Query: 1   MSEVGSERSESWNIYTTSEQSPSSSQTGIGQEAPWKSFGSSMNAISFGFVATAILISMFL 60
           M+E G+ERS  WNIYT+S+ SPS  Q  + +E PWKSFG+SMNAISFGFVATAILISMFL
Sbjct: 1   MNEFGTERSRPWNIYTSSDPSPS--QAVVDRETPWKSFGASMNAISFGFVATAILISMFL 60

Query: 61  IMAIFEHLFRPTSPFSSSEVTNNSAESGPAEKFISPNTVPTSYASDFSVLMPGQDIPTFI 120
           IMAIFEHLFRP   FSS +      ESG AEK  +P  V TSYASDFSV+MPG+  PT+I
Sbjct: 61  IMAIFEHLFRPNPGFSSPDQVT---ESGEAEKLGNPQRVSTSYASDFSVVMPGEQYPTYI 120

Query: 121 AQPAPLPCQRERIYWPSHDHNFLGP 146
           AQPAPLPC RE IYWPSH+HNF+ P
Sbjct: 121 AQPAPLPCSREGIYWPSHEHNFVFP 140

[Close]

BLAST of CmoCh16G008380 vs. TAIR10
Match: AT1G09812.1 (AT1G09812.1 unknown protein)

HSP 1 Score: 110.5 bits (275), Expect = 8.5e-25
Identity = 68/133 (51.13%), Postives = 82/133 (61.65%), Query Frame = 1


Query: 8   RSESWNIYTTSEQSPSSSQTGIGQEAPWKSFGSSMNAISFGFVATAILISMFLIMAIFEH 67
           +S SW+IY+  E            E PW+S  +SMNAISFGFVATAILISMFLIMAIFEH
Sbjct: 3   KSSSWSIYSPREGD---------SEGPWRS-STSMNAISFGFVATAILISMFLIMAIFEH 62

Query: 68  LFRP-TSPFSSSEVTNNSAESGPAE---KFISPNTVPTSYASDFSVLMPGQDIPTFIAQP 127
           LFRP  S F S          G ++        + VP S   D SV+MPG+ +P+ IA P
Sbjct: 63  LFRPENSSFDSPHQIRQRQRDGSSQFQKLADQASMVPVSTVVDVSVVMPGEKLPSHIALP 122

Query: 128 APLPCQRERIYWP 137
           APLPC+RE I+WP
Sbjct: 123 APLPCRREGIHWP 125

[Close]

BLAST of CmoCh16G008380 vs. TAIR10
Match: AT1G58007.1 (AT1G58007.1 unknown protein)

HSP 1 Score: 99.0 bits (245), Expect = 2.6e-21
Identity = 65/133 (48.87%), Postives = 81/133 (60.90%), Query Frame = 1


Query: 6   SERSESWNIYTTSEQSPSSSQTGIGQEAPWKSFGSSMNAISFGFVATAILISMFLIMAIF 65
           S    +W+IY T + S                 GSSMNAISFGFVATAILI MF+IMAI 
Sbjct: 4   SRSIRTWSIYRTKDTS-----------------GSSMNAISFGFVATAILILMFIIMAIL 63

Query: 66  EHLFRPTSPFSSSEVTNNSAESGPAEKFISPNTVPTSYASDFSVLMPGQDIPTFIAQPAP 125
           EHLFR +   SS +V ++S     AEK    + VP +  SD SV+MPG  +P+++A PAP
Sbjct: 64  EHLFR-SDHSSSYDVDDSSQFQKLAEK---ASMVPVT-TSDVSVVMPGDKLPSYVALPAP 114

Query: 126 LPCQRERIYWPSH 139
            PC+RE I WPSH
Sbjct: 124 FPCRREGIRWPSH 114

[Close]

BLAST of CmoCh16G008380 vs. TAIR10
Match: AT1G11120.1 (AT1G11120.1 unknown protein)

HSP 1 Score: 89.4 bits (220), Expect = 2.0e-18
Identity = 64/156 (41.03%), Postives = 77/156 (49.36%), Query Frame = 1


Query: 22  PSSSQTGIGQEAPWKS-FGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTS------- 81
           P  +   + +E PWKS F  S+NA+SFGFVATAILISMFL+MAIFE L R T+       
Sbjct: 17  PIGAPMNLRREEPWKSQFDDSVNAVSFGFVATAILISMFLVMAIFERLIRTTTTSTTNSD 76

Query: 82  -------PFSSSEVTNNSAESG----------------------PAEKFISPNTVPTSYA 141
                  P   S V  N A +                        +E FI      T Y+
Sbjct: 77  SSSSRVLPGMDSRVGFNGAATKLGYQSPKASNNRIVFSFSFNILKSELFIVIILRMTVYS 136

[Close]

BLAST of CmoCh16G008380 vs. TAIR10
Match: AT4G28170.1 (AT4G28170.1 unknown protein)

HSP 1 Score: 58.2 bits (139), Expect = 5.0e-09
Identity = 38/92 (41.30%), Postives = 51/92 (55.43%), Query Frame = 1


Query: 38  FGSSMNAISFGFVATAILISMFLIMAIFEHLF--RPTSPFSSSEVTNNSAESGPAEKFIS 97
           F SS+NA+ FG VAT +LI++FL++A FE     +PT              S P ++   
Sbjct: 57  FESSVNAVPFGLVATGVLIAIFLLIAFFERFMFVKPT-------------PSPPLDQKFP 116

Query: 98  PNTVPTS--YASDFSVLMPGQDIPTFIAQPAP 126
           P   P       + SVLMPG+D+PTFIAQP P
Sbjct: 117 PFASPKMDVCKREISVLMPGEDVPTFIAQPCP 135

[Close]

BLAST of CmoCh16G008380 vs. NCBI nr
Match: gi|449431856|ref|XP_004133716.1| (PREDICTED: uncharacterized protein LOC101206733 [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 2.0e-63
Identity = 129/146 (88.36%), Postives = 136/146 (93.15%), Query Frame = 1


Query: 1   MSEVGSERSESWNIYTTSEQSPSSSQTGIGQEAPWKSFGSSMNAISFGFVATAILISMFL 60
           MSE+GSERS+SWNIYTT +QSPSS QTGIGQEAPWK+FGSSMNAISFGFVATAILISMFL
Sbjct: 1   MSEIGSERSKSWNIYTTPDQSPSS-QTGIGQEAPWKNFGSSMNAISFGFVATAILISMFL 60

Query: 61  IMAIFEHLFRPTSPFSSS-EVTNNSAESGPAEKFISPNTVPTSYASDFSVLMPGQDIPTF 120
           +MAIFEHLFRP+SPFSSS EVTNNS+ES PAEKF SPNTV TSYASDFSVLMPGQ IPTF
Sbjct: 61  VMAIFEHLFRPSSPFSSSDEVTNNSSESTPAEKFASPNTVSTSYASDFSVLMPGQHIPTF 120

Query: 121 IAQPAPLPCQRERIYWPSHDHNFLGP 146
           IAQPAPLPCQRE IYWPSH HNF GP
Sbjct: 121 IAQPAPLPCQREGIYWPSHRHNFSGP 145

[Close]

BLAST of CmoCh16G008380 vs. NCBI nr
Match: gi|659102667|ref|XP_008452252.1| (PREDICTED: uncharacterized protein LOC103493323 [Cucumis melo])

HSP 1 Score: 246.5 bits (628), Expect = 2.8e-62
Identity = 124/145 (85.52%), Postives = 133/145 (91.72%), Query Frame = 1


Query: 1   MSEVGSERSESWNIYTTSEQSPSSSQTGIGQEAPWKSFGSSMNAISFGFVATAILISMFL 60
           MSE+GSERS+SWNIYTT +QSPS SQTGIGQEAPWK+FGSSMNAISFGFVATAILISMFL
Sbjct: 1   MSEIGSERSKSWNIYTTPDQSPS-SQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFL 60

Query: 61  IMAIFEHLFRPTSPFSSSEVTNNSAESGPAEKFISPNTVPTSYASDFSVLMPGQDIPTFI 120
           +MAIFEHLFRP+SPFSSS+   N++ES PAEKF SPNTV TSYASDFSVLMPGQ IPTFI
Sbjct: 61  VMAIFEHLFRPSSPFSSSDEVTNNSESTPAEKFASPNTVSTSYASDFSVLMPGQHIPTFI 120

Query: 121 AQPAPLPCQRERIYWPSHDHNFLGP 146
           AQPAPLPCQRE IYWPSH HNF GP
Sbjct: 121 AQPAPLPCQREGIYWPSHHHNFSGP 144

[Close]

BLAST of CmoCh16G008380 vs. NCBI nr
Match: gi|743908883|ref|XP_011047906.1| (PREDICTED: uncharacterized protein LOC105142121 [Populus euphratica])

HSP 1 Score: 200.7 bits (509), Expect = 1.8e-48
Identity = 106/141 (75.18%), Postives = 120/141 (85.11%), Query Frame = 1


Query: 1   MSEVGSERSESWNIYTTSEQSPSSSQTG-IGQEAPWKSFGSSMNAISFGFVATAILISMF 60
           M+E+GSERS+ WN+YT+S+ +PS  QTG I +EAPWKSFG+SMNAISFGFVATAIL+SMF
Sbjct: 1   MNELGSERSKPWNMYTSSDPAPS--QTGVIDREAPWKSFGTSMNAISFGFVATAILVSMF 60

Query: 61  LIMAIFEHLFRPTSPFSS-SEVTNNSAESGPAEKFISPNTVPTSYASDFSVLMPGQDIPT 120
           LIMAIFEHLFRPT PFSS  EVTN SAES P  K  +P TVP +YASDFSV+MPGQ  PT
Sbjct: 61  LIMAIFEHLFRPTPPFSSPQEVTNRSAESRPLHKLRNPQTVPAAYASDFSVVMPGQQHPT 120

Query: 121 FIAQPAPLPCQRERIYWPSHD 140
           FIAQPAPLPC RERI WPSH+
Sbjct: 121 FIAQPAPLPCPRERINWPSHE 139

[Close]

BLAST of CmoCh16G008380 vs. NCBI nr
Match: gi|118482926|gb|ABK93376.1| (unknown [Populus trichocarpa])

HSP 1 Score: 199.5 bits (506), Expect = 4.0e-48
Identity = 103/147 (70.07%), Postives = 123/147 (83.67%), Query Frame = 1


Query: 1   MSEVGSERSESWNIYTTSEQSPSSSQTG-IGQEAPWKSFGSSMNAISFGFVATAILISMF 60
           MSE+GSERS+ WNIYT+S+ +PS  QTG I +EAPWKSFG+SMNAISFGFVATAILISMF
Sbjct: 1   MSELGSERSKPWNIYTSSDPAPS--QTGEIDREAPWKSFGTSMNAISFGFVATAILISMF 60

Query: 61  LIMAIFEHLFRPTSPFSS-SEVTNNSAESGPAEKFISPNTVPTSYASDFSVLMPGQDIPT 120
           LIMAIFEHLFRP   FS+  EVT+ S+ES P  K  +P TVP +YASDF+V+MPGQ +PT
Sbjct: 61  LIMAIFEHLFRPNPSFSTPQEVTDGSSESRPLHKLGNPQTVPAAYASDFAVVMPGQQLPT 120

Query: 121 FIAQPAPLPCQRERIYWPSHDHNFLGP 146
           +IAQPAPLPC RE+IYWP+H+ N + P
Sbjct: 121 YIAQPAPLPCPREKIYWPNHEQNLVFP 145

[Close]

BLAST of CmoCh16G008380 vs. NCBI nr
Match: gi|802563019|ref|XP_012066673.1| (PREDICTED: uncharacterized protein LOC105629665 [Jatropha curcas])

HSP 1 Score: 197.6 bits (501), Expect = 1.5e-47
Identity = 102/142 (71.83%), Postives = 118/142 (83.10%), Query Frame = 1


Query: 1   MSEVGSERSESWNIYTTSEQSPSSSQTGIGQEAPWKSFGSSMNAISFGFVATAILISMFL 60
           M++ GSERS++WNIYT+S+ +PS +   I +EAPWKSFG+SMNAI+FGFVATAILISMFL
Sbjct: 1   MNDFGSERSKAWNIYTSSDPTPSETAV-IDKEAPWKSFGTSMNAIAFGFVATAILISMFL 60

Query: 61  IMAIFEHLFRPTSPFSS-SEVTNNSAESGPAEKFISPNTVPTSYASDFSVLMPGQDIPTF 120
           IMAIFEHLFRP   FSS  EVTN S ESG  +K  +P TV TSYASDFSV+MPGQ  PT+
Sbjct: 61  IMAIFEHLFRPNPSFSSPQEVTNRSLESGLVDKLGNPQTVATSYASDFSVVMPGQQYPTY 120

Query: 121 IAQPAPLPCQRERIYWPSHDHN 142
           IAQPAPLPCQRE IYWP+H HN
Sbjct: 121 IAQPAPLPCQREGIYWPAHQHN 141

The following BLAST results are available for this feature:

BLAST of CmoCh16G008380 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh16G008380 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6N7_CUCSA	1.4e-63	88.36	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110010 PE=4 SV=1	[more]
A9PAH3_POPTR	2.8e-48	70.07	Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1	[more]
A0A067LD68_JATCU	1.0e-47	71.83	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00242 PE=4 SV=1	[more]
U7E2H8_POPTR	1.0e-47	74.47	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0022s00590g PE=4 SV=1	[more]
A0A061DY81_THECC	3.4e-46	68.97	Uncharacterized protein OS=Theobroma cacao GN=TCM_006161 PE=4 SV=1	[more]

BLAST of CmoCh16G008380 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09812.1	8.5e-25	51.13	unknown protein	[more]
AT1G58007.1	2.6e-21	48.87	unknown protein	[more]
AT1G11120.1	2.0e-18	41.03	unknown protein	[more]
AT4G28170.1	5.0e-09	41.30	unknown protein	[more]

BLAST of CmoCh16G008380 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449431856\|ref\|XP_004133716.1\|	2.0e-63	88.36	PREDICTED: uncharacterized protein LOC101206733 [Cucumis sativus]	[more]
gi\|659102667\|ref\|XP_008452252.1\|	2.8e-62	85.52	PREDICTED: uncharacterized protein LOC103493323 [Cucumis melo]	[more]
gi\|743908883\|ref\|XP_011047906.1\|	1.8e-48	75.18	PREDICTED: uncharacterized protein LOC105142121 [Populus euphratica]	[more]
gi\|118482926\|gb\|ABK93376.1\|	4.0e-48	70.07	unknown [Populus trichocarpa]	[more]
gi\|802563019\|ref\|XP_012066673.1\|	1.5e-47	71.83	PREDICTED: uncharacterized protein LOC105629665 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G008380.1	CmoCh16G008380.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33728	FAMILY NOT NAMED	coord: 1..142 score: 5.5
None	No IPR available	PANTHER	PTHR33728:SF3	SUBFAMILY NOT NAMED	coord: 1..142 score: 5.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh16G008380	Cucsa.074840	Cucumber (Gy14) v1	cgycmoB0117
CmoCh16G008380	CmaCh16G007750	Cucurbita maxima (Rimu)	cmacmoB322
CmoCh16G008380	Cla011804	Watermelon (97103) v1	cmowmB303
CmoCh16G008380	Csa3G110010	Cucumber (Chinese Long) v2	cmocuB318
CmoCh16G008380	MELO3C016499	Melon (DHL92) v3.5.1	cmomeB285
CmoCh16G008380	ClCG10G007100	Watermelon (Charleston Gray)	cmowcgB278
CmoCh16G008380	CSPI03G06270	Wild cucumber (PI 183967)	cmocpiB326
CmoCh16G008380	Lsi05G007370	Bottle gourd (USVL1VR-Ls)	cmolsiB302
CmoCh16G008380	Cp4.1LG14g00410	Cucurbita pepo (Zucchini)	cmocpeB307
CmoCh16G008380	Cp4.1LG01g08510	Cucurbita pepo (Zucchini)	cmocpeB312
CmoCh16G008380	MELO3C016499.2	Melon (DHL92) v3.6.1	cmomedB333
CmoCh16G008380	CsaV3_3G006410	Cucumber (Chinese Long) v3	cmocucB0380
CmoCh16G008380	Cla97C10G190890	Watermelon (97103) v2	cmowmbB322
CmoCh16G008380	Bhi11G000666	Wax gourd	cmowgoB0418
CmoCh16G008380	CsGy3G006390	Cucumber (Gy14) v2	cgybcmoB313
CmoCh16G008380	Carg00015	Silver-seed gourd	carcmoB0920
CmoCh16G008380	Carg25390	Silver-seed gourd	carcmoB0762

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh16G008380	CmoCh04G009640	Cucurbita moschata (Rifu)	cmocmoB285

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh16G008380	Cucurbita maxima (Rimu)	cmacmoB700
CmoCh16G008380	Bottle gourd (USVL1VR-Ls)	cmolsiB305
CmoCh16G008380	Wax gourd	cmowgoB0410
CmoCh16G008380	Wax gourd	cmowgoB0421