Carg00015 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg00015
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Multidrug resistance 3
Location	Cucurbita_argyrosperma_scaffold_001 : 53672 .. 55556 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAGTGGAAAGTGTGAGCTGGGTTGGCTACTTTATTAAATATTGCTTTGAGAAAAATAGATGTCTTGTTTTTTGATGACAGGTTAACCATGGAATTGGAAGTTTTGGATGCAAACTATCCTTCATAGCCTAAACCAATACTTTAGAAGCTCTTAAGAAACCGATTAGTTTATAGCCAGATGGTTCGCTTCATTTTCGATATCGCGACATCAGAATAATCGACCGCTATCACAGAGGAGGATCTTGGACATCTTCTTCATTTTCTCTTGGCTTCTGTAAGTGCTAGAATTTTGTTTATTATACTGTTCTTGTGCCTCTGCCTTGGAAATGGGATTCTAATAAGAATGCTGAGAAACTCAGTTTCTTTTCAGGGATATGGATCATCAGCTATACATTCTTATGTAGAAGCCATTTTTATCAGCTTCATTTTTGCTCCAAGCTTTTAGTTGAGGAAGAGATAAGCCACCATCTCAAAGTTAAAGGTATGAGTGAGATTGGTTCTGAAAGATCAAAGTCATGGAACATATACACAACTCCAGACCAGAGCCCATCATCTCAAACAGGCATTGGTCAAGAAGCTCCTTGGAAGAACTTTGGATCCTCCATGAATGCCATTTCCTTTGGCTTTGTTGCTACTGCAATCTTGATATCCATGTTCCTTATCATGGCCATCTTTGAGCATCTTTTTAGACCAACTTCTTCTTTCTCCTCCTCTGGTGAAGTGACCAACAACTTTGCACAATCGGGTCCGGTCGAGAAATTCGCTAGTCCAAATACGGTATGTTTCGACTCGGGTTGTTTACCTTTACAGTTTGTGTTTCTTGGCTTGTGGGGCTTAGATTACCAACCTTTGATATTATTTAACTCGTTACTGCTTTCCCTTTCCCATAAACAAGTGTTTCAGTGGCTTAGGCTTTAAACTACATCATATCCTATATCAATTCCCCTTCCCCTTGAACAGATTTGTTTAGAGACCTGTAGGTGAAAACAATTTGAAGCATACCACTTTTTAGAATATGAGATATCTGTTCCCAGTCCTTGACTCGTAGTAGATAAAGTCACCTTGAGACGTTTCTCTAACGAAAATGGGCATTTCGATTGGTTTCGAGAAAAACAATCATAATTAACTCTTCTAAAATTTCGTTAACTCTTCATAGAACTCTTTGTACGTGCGTCGAAAAACACTCGCAATATCCTAACTAGTTTTGTTTCTGCTATTTTTTCTTGTCATCTTCAAGAACATTATCTTTTATCAGAACAGTGACAAGACACAGACATCAACACAAACCAGTACCAATCATAACACAATACATGCTTTTCTTTCAAGGACAAGACATTGCATTGGACATAGGAGATGATATGTTTTTGTTCTGTGGCAGGTGCCAACATCATATGCAGCTGATTTCTCAGTGTTGATGCCAGGTCAGCACATCCCCACCTTCATTGCCCAGCCAGCCCCTCTGCCATGCCAAAGAGAGGGGACTTATTGGCCATCTCACGACCATAATTTTTCAGGCCCTTGAAACAAAGATGATATTTCTTGCCTCCATTGGAAGCAGCTGCTGCATTTAGGAAAACTGCCAGCTTTGCTTCTTCTCAGAATAATAATTCTTGTGCTCCTTCTTCACCCACTGGGAGATTTGCTCAAATGCTTGTTCTTTTTCAGTTTCTGATCTGTAAATTGATTATAAAAGAATGGCACAAGTTCTTCCACGATTTCAAGGTGTAAGTAGATATCACTTCACTTCCTCACTACAGTGAGAAGGTGCTTTAAAATTCAACATTTTGAAAGGAAAGTGTTTCTGTATAAGCTCTCATATATGGCTACAAACACAAGGAACATTTAAAATCTCTACTTATCCACAGAAGACCTGAAAATGTTATG

mRNA sequence

TAAAGTGGAAAGTGTGAGCTGGGTTGGCTACTTTATTAAATATTGCTTTGAGAAAAATAGATGTCTTGTTTTTTGATGACAGGTTAACCATGGAATTGGAAGTTTTGGATGCAAACTATCCTTCATAGCCTAAACCAATACTTTAGAAGCTCTTAAGAAACCGATTAGTTTATAGCCAGATGGTTCGCTTCATTTTCGATATCGCGACATCAGAATAATCGACCGCTATCACAGAGGAGGATCTTGGACATCTTCTTCATTTTCTCTTGGCTTCTTTTCTTTTCAGGGATATGGATCATCAGCTATACATTCTTATGTAGAAGCCATTTTTATCAGCTTCATTTTTGCTCCAAGCTTTTAGTTGAGGAAGAGATAAGCCACCATCTCAAAGTTAAAGGTATGAGTGAGATTGGTTCTGAAAGATCAAAGTCATGGAACATATACACAACTCCAGACCAGAGCCCATCATCTCAAACAGGCATTGGTCAAGAAGCTCCTTGGAAGAACTTTGGATCCTCCATGAATGCCATTTCCTTTGGCTTTGTTGCTACTGCAATCTTGATATCCATGTTCCTTATCATGGCCATCTTTGAGCATCTTTTTAGACCAACTTCTTCTTTCTCCTCCTCTGGTGAAGTGACCAACAACTTTGCACAATCGGGTCCGGTCGAGAAATTCGCTAGTCCAAATACGGTGCCAACATCATATGCAGCTGATTTCTCAGTGTTGATGCCAGGTCAGCACATCCCCACCTTCATTGCCCAGCCAGCCCCTCTGCCATGCCAAAGAGAGGGGACTTATTGGCCATCTCACGACCATAATTTTTCAGGCCCTTGAAACAAAGATGATATTTCTTGCCTCCATTGGAAGCAGCTGCTGCATTTAGGAAAACTGCCAGCTTTGCTTCTTCTCAGAATAATAATTCTTGTGCTCCTTCTTCACCCACTGGGAGATTTGCTCAAATGCTTGTTCTTTTTCAGTTTCTGATCTGTAAATTGATTATAAAAGAATGGCACAAGTTCTTCCACGATTTCAAGGTGTAAGTAGATATCACTTCACTTCCTCACTACAGTGAGAAGGTGCTTTAAAATTCAACATTTTGAAAGGAAAGTGTTTCTGTATAAGCTCTCATATATGGCTACAAACACAAGGAACATTTAAAATCTCTACTTATCCACAGAAGACCTGAAAATGTTATG

Coding sequence (CDS)

ATGAGTGAGATTGGTTCTGAAAGATCAAAGTCATGGAACATATACACAACTCCAGACCAGAGCCCATCATCTCAAACAGGCATTGGTCAAGAAGCTCCTTGGAAGAACTTTGGATCCTCCATGAATGCCATTTCCTTTGGCTTTGTTGCTACTGCAATCTTGATATCCATGTTCCTTATCATGGCCATCTTTGAGCATCTTTTTAGACCAACTTCTTCTTTCTCCTCCTCTGGTGAAGTGACCAACAACTTTGCACAATCGGGTCCGGTCGAGAAATTCGCTAGTCCAAATACGGTGCCAACATCATATGCAGCTGATTTCTCAGTGTTGATGCCAGGTCAGCACATCCCCACCTTCATTGCCCAGCCAGCCCCTCTGCCATGCCAAAGAGAGGGGACTTATTGGCCATCTCACGACCATAATTTTTCAGGCCCTTGA

Protein sequence

MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVPTSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP

Homology

[Close]

BLAST of Carg00015 vs. NCBI nr
Match: XP_022983836.1 (uncharacterized protein LOC111482330 [Cucurbita maxima] >XP_022983844.1 uncharacterized protein LOC111482330 [Cucurbita maxima] >XP_022983852.1 uncharacterized protein LOC111482330 [Cucurbita maxima])

HSP 1 Score: 295.4 bits (755), Expect = 1.0e-76
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLI 60
           MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLI
Sbjct: 1   MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLI 60

Query: 61  MAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVPTSYAADFSVLMPGQHIPTFI 120
           MAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVPTSYAADFSVLMPGQHIPTFI
Sbjct: 61  MAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVPTSYAADFSVLMPGQHIPTFI 120

Query: 121 AQPAPLPCQREGTYWPSHDHNFSGP 146
           AQPAPLPCQREGTYWPSHDHNFSGP
Sbjct: 121 AQPAPLPCQREGTYWPSHDHNFSGP 145

[Close]

BLAST of Carg00015 vs. NCBI nr
Match: XP_022942533.1 (uncharacterized protein LOC111447541 [Cucurbita moschata] >XP_022942534.1 uncharacterized protein LOC111447541 [Cucurbita moschata])

HSP 1 Score: 292.0 bits (746), Expect = 1.1e-75
Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1   MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLI 60
           MSEIGSERSKSWNIYTTPDQSPSSQTGIGQ+APWKNFGSSMNAISFGFVATAILISMFLI
Sbjct: 1   MSEIGSERSKSWNIYTTPDQSPSSQTGIGQDAPWKNFGSSMNAISFGFVATAILISMFLI 60

Query: 61  MAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVPTSYAADFSVLMPGQHIPTFI 120
           MAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVPTSYAADFSVLMPGQHIPTFI
Sbjct: 61  MAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVPTSYAADFSVLMPGQHIPTFI 120

Query: 121 AQPAPLPCQREGTYWPSHDHNFSGP 146
           AQPAPLPCQREGTYWPSHDHNF GP
Sbjct: 121 AQPAPLPCQREGTYWPSHDHNFLGP 145

[Close]

BLAST of Carg00015 vs. NCBI nr
Match: XP_023540824.1 (uncharacterized protein LOC111801082 [Cucurbita pepo subsp. pepo] >XP_023540834.1 uncharacterized protein LOC111801082 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.0 bits (746), Expect = 1.1e-75
Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1   MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLI 60
           MSEIGSERSKSWNIYTTPDQSPSSQ GIGQEAPWKNFGSSMNAISFGFVATAILISMFLI
Sbjct: 1   MSEIGSERSKSWNIYTTPDQSPSSQRGIGQEAPWKNFGSSMNAISFGFVATAILISMFLI 60

Query: 61  MAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVPTSYAADFSVLMPGQHIPTFI 120
           MAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKF+SPNTVPTSYAADFSVLMPGQHIPTFI
Sbjct: 61  MAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFSSPNTVPTSYAADFSVLMPGQHIPTFI 120

Query: 121 AQPAPLPCQREGTYWPSHDHNFSGP 146
           AQPAPLPCQREGTYWPSHDHNFSGP
Sbjct: 121 AQPAPLPCQREGTYWPSHDHNFSGP 145

[Close]

BLAST of Carg00015 vs. NCBI nr
Match: XP_004133716.1 (PREDICTED: uncharacterized protein LOC101206733 [Cucumis sativus] >XP_011650567.1 PREDICTED: uncharacterized protein LOC101206733 [Cucumis sativus] >XP_011650568.1 PREDICTED: uncharacterized protein LOC101206733 [Cucumis sativus] >KGN56252.1 hypothetical protein Csa_3G110010 [Cucumis sativus])

HSP 1 Score: 269.2 bits (687), Expect = 7.9e-69
Identity = 132/145 (91.03%), Postives = 137/145 (94.48%), Query Frame = 0


Query: 1   MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLI 60
           MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFL+
Sbjct: 1   MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLV 60

Query: 61  MAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVPTSYAADFSVLMPGQHIPTFI 120
           MAIFEHLFRP+S FSSS EVTNN ++S P EKFASPNTV TSYA+DFSVLMPGQHIPTFI
Sbjct: 61  MAIFEHLFRPSSPFSSSDEVTNNSSESTPAEKFASPNTVSTSYASDFSVLMPGQHIPTFI 120

Query: 121 AQPAPLPCQREGTYWPSHDHNFSGP 146
           AQPAPLPCQREG YWPSH HNFSGP
Sbjct: 121 AQPAPLPCQREGIYWPSHRHNFSGP 145

[Close]

BLAST of Carg00015 vs. NCBI nr
Match: XP_016901214.1 (PREDICTED: uncharacterized protein LOC103493322 [Cucumis melo] >XP_008452251.2 PREDICTED: uncharacterized protein LOC103493322 [Cucumis melo])

HSP 1 Score: 265.8 bits (678), Expect = 8.8e-68
Identity = 132/145 (91.03%), Postives = 137/145 (94.48%), Query Frame = 0


Query: 1   MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLI 60
           MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFL+
Sbjct: 1   MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLV 60

Query: 61  MAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVPTSYAADFSVLMPGQHIPTFI 120
           MAIFEHLFRP+S FSSS EVTNN ++S P EKFASPNTV TSYA+DFSVLMPGQHIPTFI
Sbjct: 61  MAIFEHLFRPSSPFSSSDEVTNN-SESTPAEKFASPNTVSTSYASDFSVLMPGQHIPTFI 120

Query: 121 AQPAPLPCQREGTYWPSHDHNFSGP 146
           AQPAPLPCQREG YWPSH HNFSGP
Sbjct: 121 AQPAPLPCQREGIYWPSHHHNFSGP 144

[Close]

BLAST of Carg00015 vs. TAIR10
Match: AT1G09812.1 (unknown protein)

HSP 1 Score: 116.7 bits (291), Expect = 1.2e-26
Identity = 71/132 (53.79%), Postives = 88/132 (66.67%), Query Frame = 0


Query: 8   RSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHL 67
           +S SW+IY +P +  S       E PW++  +SMNAISFGFVATAILISMFLIMAIFEHL
Sbjct: 3   KSSSWSIY-SPREGDS-------EGPWRS-STSMNAISFGFVATAILISMFLIMAIFEHL 62

Query: 68  FRP-TSSFSSSGEVTNNFAQ-SGPVEKFA-SPNTVPTSYAADFSVLMPGQHIPTFIAQPA 127
           FRP  SSF S  ++       S   +K A   + VP S   D SV+MPG+ +P+ IA PA
Sbjct: 63  FRPENSSFDSPHQIRQRQRDGSSQFQKLADQASMVPVSTVVDVSVVMPGEKLPSHIALPA 122

Query: 128 PLPCQREGTYWP 137
           PLPC+REG +WP
Sbjct: 123 PLPCRREGIHWP 125

[Close]

BLAST of Carg00015 vs. TAIR10
Match: AT1G58007.1 (unknown protein)

HSP 1 Score: 104.4 bits (259), Expect = 6.1e-23
Identity = 64/133 (48.12%), Postives = 80/133 (60.15%), Query Frame = 0


Query: 6   SERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFE 65
           S   ++W+IY T D S                GSSMNAISFGFVATAILI MF+IMAI E
Sbjct: 4   SRSIRTWSIYRTKDTS----------------GSSMNAISFGFVATAILILMFIIMAILE 63

Query: 66  HLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVPTSYAADFSVLMPGQHIPTFIAQPAP 125
           HLFR  S  SSS +V +    S   +K A   ++     +D SV+MPG  +P+++A PAP
Sbjct: 64  HLFR--SDHSSSYDVDD----SSQFQKLAEKASMVPVTTSDVSVVMPGDKLPSYVALPAP 114

Query: 126 LPCQREGTYWPSH 139
            PC+REG  WPSH
Sbjct: 124 FPCRREGIRWPSH 114

[Close]

BLAST of Carg00015 vs. TAIR10
Match: AT1G11120.1 (unknown protein)

HSP 1 Score: 64.3 bits (155), Expect = 7.0e-11
Identity = 54/131 (41.22%), Postives = 64/131 (48.85%), Query Frame = 0


Query: 30  QEAPWKN-FGSSMNAISFGFVATAILISMFLIMAIFEHLFR------------------- 89
           +E PWK+ F  S+NA+SFGFVATAILISMFL+MAIFE L R                   
Sbjct: 26  REEPWKSQFDDSVNAVSFGFVATAILISMFLVMAIFERLIRXXXXXXXXXXXXXXRVLPG 85

Query: 90  ----------PTSSFSSSGEVTNN---FAQSGPV---EKFASPNTVPTSYAADFSVLMPG 125
                      T     S + +NN   F+ S  +   E F       T Y+   SVLMPG
Sbjct: 86  MDSRVGFNGAATKLGYQSPKASNNRIVFSFSFNILKSELFIVIILRMTVYSNGVSVLMPG 145

[Close]

BLAST of Carg00015 vs. TAIR10
Match: AT4G28170.1 (unknown protein)

HSP 1 Score: 55.8 bits (133), Expect = 2.5e-08
Identity = 40/91 (43.96%), Postives = 51/91 (56.04%), Query Frame = 0


Query: 37  FGSSMNAISFGFVATAILISMFLIMAIFEHLF--RPTSSFSSSGEVTNNFAQSGPVEKFA 96
           F SS+NA+ FG VAT +LI++FL++A FE     +PT S            Q  P   FA
Sbjct: 57  FESSVNAVPFGLVATGVLIAIFLLIAFFERFMFVKPTPS--------PPLDQKFP--PFA 116

Query: 97  SPNTVPTSYAADFSVLMPGQHIPTFIAQPAP 126
           SP         + SVLMPG+ +PTFIAQP P
Sbjct: 117 SPKM--DVCKREISVLMPGEDVPTFIAQPCP 135

[Close]

BLAST of Carg00015 vs. TrEMBL
Match: tr|A0A0A0L6N7|A0A0A0L6N7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110010 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 5.2e-69
Identity = 132/145 (91.03%), Postives = 137/145 (94.48%), Query Frame = 0


Query: 1   MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLI 60
           MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFL+
Sbjct: 1   MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLV 60

Query: 61  MAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVPTSYAADFSVLMPGQHIPTFI 120
           MAIFEHLFRP+S FSSS EVTNN ++S P EKFASPNTV TSYA+DFSVLMPGQHIPTFI
Sbjct: 61  MAIFEHLFRPSSPFSSSDEVTNNSSESTPAEKFASPNTVSTSYASDFSVLMPGQHIPTFI 120

Query: 121 AQPAPLPCQREGTYWPSHDHNFSGP 146
           AQPAPLPCQREG YWPSH HNFSGP
Sbjct: 121 AQPAPLPCQREGIYWPSHRHNFSGP 145

[Close]

BLAST of Carg00015 vs. TrEMBL
Match: tr|A0A1S4DZ08|A0A1S4DZ08_CUCME (uncharacterized protein LOC103493322 OS=Cucumis melo OX=3656 GN=LOC103493322 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 5.8e-68
Identity = 132/145 (91.03%), Postives = 137/145 (94.48%), Query Frame = 0


Query: 1   MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLI 60
           MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFL+
Sbjct: 1   MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLV 60

Query: 61  MAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVPTSYAADFSVLMPGQHIPTFI 120
           MAIFEHLFRP+S FSSS EVTNN ++S P EKFASPNTV TSYA+DFSVLMPGQHIPTFI
Sbjct: 61  MAIFEHLFRPSSPFSSSDEVTNN-SESTPAEKFASPNTVSTSYASDFSVLMPGQHIPTFI 120

Query: 121 AQPAPLPCQREGTYWPSHDHNFSGP 146
           AQPAPLPCQREG YWPSH HNFSGP
Sbjct: 121 AQPAPLPCQREGIYWPSHHHNFSGP 144

[Close]

BLAST of Carg00015 vs. TrEMBL
Match: tr|A0A067LD68|A0A067LD68_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_00242 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 8.4e-51
Identity = 101/141 (71.63%), Postives = 117/141 (82.98%), Query Frame = 0


Query: 1   MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLI 60
           M++ GSERSK+WNIYT+ D +PS    I +EAPWK+FG+SMNAI+FGFVATAILISMFLI
Sbjct: 1   MNDFGSERSKAWNIYTSSDPTPSETAVIDKEAPWKSFGTSMNAIAFGFVATAILISMFLI 60

Query: 61  MAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVPTSYAADFSVLMPGQHIPTFI 120
           MAIFEHLFRP  SFSS  EVTN   +SG V+K  +P TV TSYA+DFSV+MPGQ  PT+I
Sbjct: 61  MAIFEHLFRPNPSFSSPQEVTNRSLESGLVDKLGNPQTVATSYASDFSVVMPGQQYPTYI 120

Query: 121 AQPAPLPCQREGTYWPSHDHN 142
           AQPAPLPCQREG YWP+H HN
Sbjct: 121 AQPAPLPCQREGIYWPAHQHN 141

[Close]

BLAST of Carg00015 vs. TrEMBL
Match: tr|A0A1R3HXQ2|A0A1R3HXQ2_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_16309 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.5e-49
Identity = 103/147 (70.07%), Postives = 118/147 (80.27%), Query Frame = 0


Query: 1   MSEIGSERSKSWNIYTTPDQSPSSQTGIGQE--APWKNFGSSMNAISFGFVATAILISMF 60
           M+E GSERS+ WN+YT+ D SP SQT + +E   PWK+FG+SMNAISFGFVATAILISMF
Sbjct: 1   MNEFGSERSRPWNLYTSSDPSP-SQTVVDKETPTPWKSFGTSMNAISFGFVATAILISMF 60

Query: 61  LIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVPTSYAADFSVLMPGQHIPT 120
           LIMAIFEHLFRP  SFSS  +VTN    SG VEK  +P  V TSYA+DFSV+MPG+  PT
Sbjct: 61  LIMAIFEHLFRPNPSFSSPDQVTNAALASGSVEKLGNPQRVSTSYASDFSVVMPGEQYPT 120

Query: 121 FIAQPAPLPCQREGTYWPSHDHNFSGP 146
           +IAQPAPLPC REGTYWPSH+HNF  P
Sbjct: 121 YIAQPAPLPCTREGTYWPSHEHNFVFP 146

[Close]

BLAST of Carg00015 vs. TrEMBL
Match: tr|A0A251K0J0|A0A251K0J0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G117600 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 6.0e-49
Identity = 102/142 (71.83%), Postives = 113/142 (79.58%), Query Frame = 0


Query: 1   MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLI 60
           MS   SERSK WNIYTTPD + S    I +EAPWK+FG+SMNAI+FGFVATAILISMFLI
Sbjct: 1   MSTFSSERSKPWNIYTTPDPTSSQTGAIDREAPWKSFGTSMNAIAFGFVATAILISMFLI 60

Query: 61  MAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTV-PTSYAADFSVLMPGQHIPTF 120
           MAIFEHLFRP  SFSS   + N   QSGPV+K  +P TV  TSYA DFSVLMPGQH PT+
Sbjct: 61  MAIFEHLFRPNPSFSSPQGLINRSLQSGPVDKLGNPQTVATTSYAVDFSVLMPGQHCPTY 120

Query: 121 IAQPAPLPCQREGTYWPSHDHN 142
           IAQPAPLPC REG YWPSH++N
Sbjct: 121 IAQPAPLPCTREGIYWPSHENN 142

The following BLAST results are available for this feature:

BLAST of Carg00015 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022983836.1	1.0e-76	100.00	uncharacterized protein LOC111482330 [Cucurbita maxima] >XP_022983844.1 uncharac...	[more]
XP_022942533.1	1.1e-75	98.62	uncharacterized protein LOC111447541 [Cucurbita moschata] >XP_022942534.1 unchar...	[more]
XP_023540824.1	1.1e-75	98.62	uncharacterized protein LOC111801082 [Cucurbita pepo subsp. pepo] >XP_023540834....	[more]
XP_004133716.1	7.9e-69	91.03	PREDICTED: uncharacterized protein LOC101206733 [Cucumis sativus] >XP_011650567....	[more]
XP_016901214.1	8.8e-68	91.03	PREDICTED: uncharacterized protein LOC103493322 [Cucumis melo] >XP_008452251.2 P...	[more]

BLAST of Carg00015 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09812.1	1.2e-26	53.79	unknown protein	[more]
AT1G58007.1	6.1e-23	48.12	unknown protein	[more]
AT1G11120.1	7.0e-11	41.22	unknown protein	[more]
AT4G28170.1	2.5e-08	43.96	unknown protein	[more]

BLAST of Carg00015 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg00015 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L6N7\|A0A0A0L6N7_CUCSA	5.2e-69	91.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110010 PE=4 SV=1	[more]
tr\|A0A1S4DZ08\|A0A1S4DZ08_CUCME	5.8e-68	91.03	uncharacterized protein LOC103493322 OS=Cucumis melo OX=3656 GN=LOC103493322 PE=...	[more]
tr\|A0A067LD68\|A0A067LD68_JATCU	8.4e-51	71.63	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_00242 PE=4 SV=1	[more]
tr\|A0A1R3HXQ2\|A0A1R3HXQ2_COCAP	3.5e-49	70.07	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_16309 PE=4 ...	[more]
tr\|A0A251K0J0\|A0A251K0J0_MANES	6.0e-49	71.83	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G117600 PE=4 SV=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00015-RA	Carg00015-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR33728	FAMILY NOT NAMED	coord: 1..142
None	No IPR available	PANTHER	PTHR33728:SF3	SUBFAMILY NOT NAMED	coord: 1..142

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg00015	Cla011804	Watermelon (97103) v1	carwmB0664
Carg00015	Csa3G110010	Cucumber (Chinese Long) v2	carcuB0684
Carg00015	MELO3C016499	Melon (DHL92) v3.5.1	carmeB0670
Carg00015	ClCG10G007100	Watermelon (Charleston Gray)	carwcgB0641
Carg00015	CSPI03G06270	Wild cucumber (PI 183967)	carcpiB0696
Carg00015	Cucsa.074840	Cucumber (Gy14) v1	carcgyB0740
Carg00015	CmaCh16G007750	Cucurbita maxima (Rimu)	carcmaB0946
Carg00015	CmoCh16G008380	Cucurbita moschata (Rifu)	carcmoB0920
Carg00015	CmoCh04G009640	Cucurbita moschata (Rifu)	carcmoB0923
Carg00015	Lsi05G007370	Bottle gourd (USVL1VR-Ls)	carlsiB614
Carg00015	Cp4.1LG01g08510	Cucurbita pepo (Zucchini)	carcpeB0938
Carg00015	Cp4.1LG14g00410	Cucurbita pepo (Zucchini)	carcpeB0937
Carg00015	CsGy3G006390	Cucumber (Gy14) v2	carcgybB0659
Carg00015	MELO3C016499.2	Melon (DHL92) v3.6.1	carmedB0683
Carg00015	CsaV3_3G006410	Cucumber (Chinese Long) v3	carcucB0698
Carg00015	Cla97C10G190890	Watermelon (97103) v2	carwmbB0686
Carg00015	Bhi11G000666	Wax gourd	carwgoB0778

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg00015	Carg25390	Silver-seed gourd	carcarB519

The following block(s) are covering this gene:


Gene	Organism	Block
Carg00015	Cucurbita maxima (Rimu)	carcmaB0948
Carg00015	Bottle gourd (USVL1VR-Ls)	carlsiB616
Carg00015	Wax gourd	carwgoB0775
Carg00015	Wax gourd	carwgoB0779