Cla011804 (gene) Watermelon (97103) v1

NameCla011804
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr7 : 9811258 .. 9812787 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGAGATTGGCTCTGAAAGATCAAAGTCATGGAACATTTATACAACTCCAGACCAGAGGCCATCATCTCAAACAGGCATTGGTCAAGAAGCTCCTTGGAAGAACTTTGGATCCTCCATGAATGCCATTTCCTTTGGCTTTGTTGCCACTGCAATCTTGATATCAATGTTCCTTGTCATGGCCATCTTTGAGCATCTGTTTAGACCAACTTCTCCTTTCTCCTCATCTGATGAAGTGACCAACAACTCCTCAGAATCAAGTCCAGCCGAGAAATTCGCAAGTCCAAATACGGTAAATTTCGAATCAAGTTGTTTATCTTTACATTACAAGTTTCTTGGCTTGTGGGGTTTATTCACCATCCTTTTGTTTAATATCATTATCTCTTTGGTGATTTCCTCTTCCCTTGAAACAAGTGTTTCAGTTGCTGAGGCTTTAAACTACTTCATTTCATTATAGAATAAGCCCTTTTTTTCCCTTGAACAAATTTGCTTAGAAGATCAGTTCAAGACAACTTAAAGCCAACTTTTCTTTCTTAGTTCTAGAATAAGTATAAATATGTTTATCTTTAATATCTTGGTACTTTCTAGAATATGAAGAGAAGATATCCATAACAATTCATACACTTTTTTCACCCTTCATATTCTTTTTCCTAGTCCCAAAACTCGTAGCAGAACAAAGGCACCTTGAGACTTGAAAGTAGATATCTTTTCTCCAATGAAAATAGTTATTTAAGTCAATTGATCACATGACGTGGGATAATCCTTTGAAATTTTCTAAAACTAGTGTTGAGAAATTTGTAAGGTAGGATATTTAATTATCTAGACAAGAAAAGCAAAAGAAGAAAATATTAGAATTAATAAGGAGGCATTTGGGGCAAGGAGTAGAGTTGTGAACTCCCAGAACACGTTGTAAAGAATTAATAAAGCATAAAATAGATGTTTTTTAGTTGCAGAGCCGACGAACTTTTGGGTCAAACAAAGAGTGGAGTTCTCTCCAACTCCTAGGAGAATACTGATTCTACTAACTTGTTATACAAGTGGCTTCATAAACTTCATCTCTTGACAAAAGTTGCACAGAAAGACAATTATATTTCCTAACTGGTTTTGCTTTTGTTACCTCTATATTTCAAAAATAACTTCCATGCTAGGCTGAAAAATCCCAAAAAATCAAGTGTAGTTTGAGAGGGAAAAAAAAAAAAAGAGAGACTAATTTCTGTGTCTTCTTCAAGAACATGATCTTTTATCACAACAGTGACAAGACAGAGAACATCAACACAAACCAGTAGCAATGATTACACAATACATGCTTTTCTTTTAAGGTCAAGTCATTAACACTTGGAAATGATATGTTTTTTGTTTATTGAGTGTGGTCTTTCTGTGACAGGTGTCAACATCATATCCATCTGATTTCTCAGTGTTGATGCCAGGTCAGCACGTCCCCACCTTCATTGCGCAACCAGCTCCTCTGCCATGTCAAAGAGAGAAGATTTACTGGCCATCTCATGACCATAATTTTTCAGGTCCTTGA

mRNA sequence

ATGAGTGAGATTGGCTCTGAAAGATCAAAGTCATGGAACATTTATACAACTCCAGACCAGAGGCCATCATCTCAAACAGGCATTGGTCAAGAAGCTCCTTGGAAGAACTTTGGATCCTCCATGAATGCCATTTCCTTTGGCTTTGTTGCCACTGCAATCTTGATATCAATGTTCCTTGTCATGGCCATCTTTGAGCATCTGTTTAGACCAACTTCTCCTTTCTCCTCATCTGATGAAGTGACCAACAACTCCTCAGAATCAAGTCCAGCCGAGAAATTCGCAAGTCCAAATACGGTGTCAACATCATATCCATCTGATTTCTCAGTGTTGATGCCAGGTCAGCACGTCCCCACCTTCATTGCGCAACCAGCTCCTCTGCCATGTCAAAGAGAGAAGATTTACTGGCCATCTCATGACCATAATTTTTCAGGTCCTTGA

Coding sequence (CDS)

ATGAGTGAGATTGGCTCTGAAAGATCAAAGTCATGGAACATTTATACAACTCCAGACCAGAGGCCATCATCTCAAACAGGCATTGGTCAAGAAGCTCCTTGGAAGAACTTTGGATCCTCCATGAATGCCATTTCCTTTGGCTTTGTTGCCACTGCAATCTTGATATCAATGTTCCTTGTCATGGCCATCTTTGAGCATCTGTTTAGACCAACTTCTCCTTTCTCCTCATCTGATGAAGTGACCAACAACTCCTCAGAATCAAGTCCAGCCGAGAAATTCGCAAGTCCAAATACGGTGTCAACATCATATCCATCTGATTTCTCAGTGTTGATGCCAGGTCAGCACGTCCCCACCTTCATTGCGCAACCAGCTCCTCTGCCATGTCAAAGAGAGAAGATTTACTGGCCATCTCATGACCATAATTTTTCAGGTCCTTGA

Protein sequence

MSEIGSERSKSWNIYTTPDQRPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLVMAIFEHLFRPTSPFSSSDEVTNNSSESSPAEKFASPNTVSTSYPSDFSVLMPGQHVPTFIAQPAPLPCQREKIYWPSHDHNFSGP
BLAST of Cla011804 vs. TrEMBL
Match: A0A0A0L6N7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110010 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 1.3e-74
Identity = 138/145 (95.17%), Postives = 141/145 (97.24%), Query Frame = 1

Query: 1   MSEIGSERSKSWNIYTTPDQRPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLV 60
           MSEIGSERSKSWNIYTTPDQ PSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLV
Sbjct: 1   MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLV 60

Query: 61  MAIFEHLFRPTSPFSSSDEVTNNSSESSPAEKFASPNTVSTSYPSDFSVLMPGQHVPTFI 120
           MAIFEHLFRP+SPFSSSDEVTNNSSES+PAEKFASPNTVSTSY SDFSVLMPGQH+PTFI
Sbjct: 61  MAIFEHLFRPSSPFSSSDEVTNNSSESTPAEKFASPNTVSTSYASDFSVLMPGQHIPTFI 120

Query: 121 AQPAPLPCQREKIYWPSHDHNFSGP 146
           AQPAPLPCQRE IYWPSH HNFSGP
Sbjct: 121 AQPAPLPCQREGIYWPSHRHNFSGP 145

BLAST of Cla011804 vs. TrEMBL
Match: A0A067LD68_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00242 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 9.2e-52
Identity = 99/141 (70.21%), Postives = 114/141 (80.85%), Query Frame = 1

Query: 1   MSEIGSERSKSWNIYTTPDQRPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLV 60
           M++ GSERSK+WNIYT+ D  PS    I +EAPWK+FG+SMNAI+FGFVATAILISMFL+
Sbjct: 1   MNDFGSERSKAWNIYTSSDPTPSETAVIDKEAPWKSFGTSMNAIAFGFVATAILISMFLI 60

Query: 61  MAIFEHLFRPTSPFSSSDEVTNNSSESSPAEKFASPNTVSTSYPSDFSVLMPGQHVPTFI 120
           MAIFEHLFRP   FSS  EVTN S ES   +K  +P TV+TSY SDFSV+MPGQ  PT+I
Sbjct: 61  MAIFEHLFRPNPSFSSPQEVTNRSLESGLVDKLGNPQTVATSYASDFSVVMPGQQYPTYI 120

Query: 121 AQPAPLPCQREKIYWPSHDHN 142
           AQPAPLPCQRE IYWP+H HN
Sbjct: 121 AQPAPLPCQREGIYWPAHQHN 141

BLAST of Cla011804 vs. TrEMBL
Match: A9PAH3_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.6e-51
Identity = 99/145 (68.28%), Postives = 115/145 (79.31%), Query Frame = 1

Query: 1   MSEIGSERSKSWNIYTTPDQRPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLV 60
           MSE+GSERSK WNIYT+ D  PS    I +EAPWK+FG+SMNAISFGFVATAILISMFL+
Sbjct: 1   MSELGSERSKPWNIYTSSDPAPSQTGEIDREAPWKSFGTSMNAISFGFVATAILISMFLI 60

Query: 61  MAIFEHLFRPTSPFSSSDEVTNNSSESSPAEKFASPNTVSTSYPSDFSVLMPGQHVPTFI 120
           MAIFEHLFRP   FS+  EVT+ SSES P  K  +P TV  +Y SDF+V+MPGQ +PT+I
Sbjct: 61  MAIFEHLFRPNPSFSTPQEVTDGSSESRPLHKLGNPQTVPAAYASDFAVVMPGQQLPTYI 120

Query: 121 AQPAPLPCQREKIYWPSHDHNFSGP 146
           AQPAPLPC REKIYWP+H+ N   P
Sbjct: 121 AQPAPLPCPREKIYWPNHEQNLVFP 145

BLAST of Cla011804 vs. TrEMBL
Match: B9SKD0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0759140 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.7e-50
Identity = 102/145 (70.34%), Postives = 115/145 (79.31%), Query Frame = 1

Query: 1   MSEIGSERSKSWNIYTTPDQRPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLV 60
           M+E GSERSK WNIYT+ D  PS    I +EAPWKNFG+SMNAI+FGFVATAILISMFL+
Sbjct: 1   MNEFGSERSKPWNIYTSSDPTPSQTGVIDREAPWKNFGTSMNAIAFGFVATAILISMFLI 60

Query: 61  MAIFEHLFRPTSPFSSSDEV--TNNSSESSPAEKFASPNTVSTSYPSDFSVLMPGQHVPT 120
           MAIFEHLFRP   FSS  EV  T+ S ES PA+K  +P TV+TSY SDFSV+MPG H PT
Sbjct: 61  MAIFEHLFRPNPSFSSPQEVTTTDRSLESGPADKLGNPQTVTTSYASDFSVVMPGHHYPT 120

Query: 121 FIAQPAPL--PCQREKIYWPSHDHN 142
           +IAQPAPL  PC RE IYWPSH+HN
Sbjct: 121 YIAQPAPLPVPCPREGIYWPSHEHN 145

BLAST of Cla011804 vs. TrEMBL
Match: U7E2H8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0022s00590g PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 6.6e-50
Identity = 97/139 (69.78%), Postives = 112/139 (80.58%), Query Frame = 1

Query: 1   MSEIGSERSKSWNIYTTPDQRPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLV 60
           M+E+GSERSK WNIYT+ D  PS    I +EAPWK+FG+SMNAISFGFVATAIL+SMFL+
Sbjct: 1   MNELGSERSKPWNIYTSSDPAPSQTGVIDREAPWKSFGTSMNAISFGFVATAILVSMFLI 60

Query: 61  MAIFEHLFRPTSPFSSSDEVTNNSSESSPAEKFASPNTVSTSYPSDFSVLMPGQHVPTFI 120
           MAIFEHLFRPT PFSS  EVTN S+ES P  K  +P TV  +Y SDFSV+MPGQ  PT I
Sbjct: 61  MAIFEHLFRPTPPFSSPQEVTNGSAESRPLHKLRNPQTVPAAYASDFSVVMPGQQHPTCI 120

Query: 121 AQPAPLPCQREKIYWPSHD 140
           AQPAPLPC RE+I WP+H+
Sbjct: 121 AQPAPLPCPRERINWPAHE 139

BLAST of Cla011804 vs. NCBI nr
Match: gi|449431856|ref|XP_004133716.1| (PREDICTED: uncharacterized protein LOC101206733 [Cucumis sativus])

HSP 1 Score: 287.0 bits (733), Expect = 1.9e-74
Identity = 138/145 (95.17%), Postives = 141/145 (97.24%), Query Frame = 1

Query: 1   MSEIGSERSKSWNIYTTPDQRPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLV 60
           MSEIGSERSKSWNIYTTPDQ PSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLV
Sbjct: 1   MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLV 60

Query: 61  MAIFEHLFRPTSPFSSSDEVTNNSSESSPAEKFASPNTVSTSYPSDFSVLMPGQHVPTFI 120
           MAIFEHLFRP+SPFSSSDEVTNNSSES+PAEKFASPNTVSTSY SDFSVLMPGQH+PTFI
Sbjct: 61  MAIFEHLFRPSSPFSSSDEVTNNSSESTPAEKFASPNTVSTSYASDFSVLMPGQHIPTFI 120

Query: 121 AQPAPLPCQREKIYWPSHDHNFSGP 146
           AQPAPLPCQRE IYWPSH HNFSGP
Sbjct: 121 AQPAPLPCQREGIYWPSHRHNFSGP 145

BLAST of Cla011804 vs. NCBI nr
Match: gi|659102667|ref|XP_008452252.1| (PREDICTED: uncharacterized protein LOC103493323 [Cucumis melo])

HSP 1 Score: 281.2 bits (718), Expect = 1.0e-72
Identity = 137/145 (94.48%), Postives = 140/145 (96.55%), Query Frame = 1

Query: 1   MSEIGSERSKSWNIYTTPDQRPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLV 60
           MSEIGSERSKSWNIYTTPDQ PSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLV
Sbjct: 1   MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLV 60

Query: 61  MAIFEHLFRPTSPFSSSDEVTNNSSESSPAEKFASPNTVSTSYPSDFSVLMPGQHVPTFI 120
           MAIFEHLFRP+SPFSSSDEVTNN SES+PAEKFASPNTVSTSY SDFSVLMPGQH+PTFI
Sbjct: 61  MAIFEHLFRPSSPFSSSDEVTNN-SESTPAEKFASPNTVSTSYASDFSVLMPGQHIPTFI 120

Query: 121 AQPAPLPCQREKIYWPSHDHNFSGP 146
           AQPAPLPCQRE IYWPSH HNFSGP
Sbjct: 121 AQPAPLPCQREGIYWPSHHHNFSGP 144

BLAST of Cla011804 vs. NCBI nr
Match: gi|802563019|ref|XP_012066673.1| (PREDICTED: uncharacterized protein LOC105629665 [Jatropha curcas])

HSP 1 Score: 211.1 bits (536), Expect = 1.3e-51
Identity = 99/141 (70.21%), Postives = 114/141 (80.85%), Query Frame = 1

Query: 1   MSEIGSERSKSWNIYTTPDQRPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLV 60
           M++ GSERSK+WNIYT+ D  PS    I +EAPWK+FG+SMNAI+FGFVATAILISMFL+
Sbjct: 1   MNDFGSERSKAWNIYTSSDPTPSETAVIDKEAPWKSFGTSMNAIAFGFVATAILISMFLI 60

Query: 61  MAIFEHLFRPTSPFSSSDEVTNNSSESSPAEKFASPNTVSTSYPSDFSVLMPGQHVPTFI 120
           MAIFEHLFRP   FSS  EVTN S ES   +K  +P TV+TSY SDFSV+MPGQ  PT+I
Sbjct: 61  MAIFEHLFRPNPSFSSPQEVTNRSLESGLVDKLGNPQTVATSYASDFSVVMPGQQYPTYI 120

Query: 121 AQPAPLPCQREKIYWPSHDHN 142
           AQPAPLPCQRE IYWP+H HN
Sbjct: 121 AQPAPLPCQREGIYWPAHQHN 141

BLAST of Cla011804 vs. NCBI nr
Match: gi|118482926|gb|ABK93376.1| (unknown [Populus trichocarpa])

HSP 1 Score: 210.3 bits (534), Expect = 2.2e-51
Identity = 99/145 (68.28%), Postives = 115/145 (79.31%), Query Frame = 1

Query: 1   MSEIGSERSKSWNIYTTPDQRPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLV 60
           MSE+GSERSK WNIYT+ D  PS    I +EAPWK+FG+SMNAISFGFVATAILISMFL+
Sbjct: 1   MSELGSERSKPWNIYTSSDPAPSQTGEIDREAPWKSFGTSMNAISFGFVATAILISMFLI 60

Query: 61  MAIFEHLFRPTSPFSSSDEVTNNSSESSPAEKFASPNTVSTSYPSDFSVLMPGQHVPTFI 120
           MAIFEHLFRP   FS+  EVT+ SSES P  K  +P TV  +Y SDF+V+MPGQ +PT+I
Sbjct: 61  MAIFEHLFRPNPSFSTPQEVTDGSSESRPLHKLGNPQTVPAAYASDFAVVMPGQQLPTYI 120

Query: 121 AQPAPLPCQREKIYWPSHDHNFSGP 146
           AQPAPLPC REKIYWP+H+ N   P
Sbjct: 121 AQPAPLPCPREKIYWPNHEQNLVFP 145

BLAST of Cla011804 vs. NCBI nr
Match: gi|743908883|ref|XP_011047906.1| (PREDICTED: uncharacterized protein LOC105142121 [Populus euphratica])

HSP 1 Score: 208.0 bits (528), Expect = 1.1e-50
Identity = 98/139 (70.50%), Postives = 113/139 (81.29%), Query Frame = 1

Query: 1   MSEIGSERSKSWNIYTTPDQRPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLV 60
           M+E+GSERSK WN+YT+ D  PS    I +EAPWK+FG+SMNAISFGFVATAIL+SMFL+
Sbjct: 1   MNELGSERSKPWNMYTSSDPAPSQTGVIDREAPWKSFGTSMNAISFGFVATAILVSMFLI 60

Query: 61  MAIFEHLFRPTSPFSSSDEVTNNSSESSPAEKFASPNTVSTSYPSDFSVLMPGQHVPTFI 120
           MAIFEHLFRPT PFSS  EVTN S+ES P  K  +P TV  +Y SDFSV+MPGQ  PTFI
Sbjct: 61  MAIFEHLFRPTPPFSSPQEVTNRSAESRPLHKLRNPQTVPAAYASDFSVVMPGQQHPTFI 120

Query: 121 AQPAPLPCQREKIYWPSHD 140
           AQPAPLPC RE+I WPSH+
Sbjct: 121 AQPAPLPCPRERINWPSHE 139

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L6N7_CUCSA1.3e-7495.17Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110010 PE=4 SV=1[more]
A0A067LD68_JATCU9.2e-5270.21Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00242 PE=4 SV=1[more]
A9PAH3_POPTR1.6e-5168.28Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1[more]
B9SKD0_RICCO1.7e-5070.34Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0759140 PE=4 SV=1[more]
U7E2H8_POPTR6.6e-5069.78Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0022s00590g PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449431856|ref|XP_004133716.1|1.9e-7495.17PREDICTED: uncharacterized protein LOC101206733 [Cucumis sativus][more]
gi|659102667|ref|XP_008452252.1|1.0e-7294.48PREDICTED: uncharacterized protein LOC103493323 [Cucumis melo][more]
gi|802563019|ref|XP_012066673.1|1.3e-5170.21PREDICTED: uncharacterized protein LOC105629665 [Jatropha curcas][more]
gi|118482926|gb|ABK93376.1|2.2e-5168.28unknown [Populus trichocarpa][more]
gi|743908883|ref|XP_011047906.1|1.1e-5070.50PREDICTED: uncharacterized protein LOC105142121 [Populus euphratica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU08519watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU33036watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU55537watermelon EST collection version 2.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla011804Cla011804.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU33036WMU33036transcribed_cluster
WMU08519WMU08519transcribed_cluster
WMU55537WMU55537transcribed_cluster


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33728FAMILY NOT NAMEDcoord: 1..143
score: 8.3
NoneNo IPR availablePANTHERPTHR33728:SF3SUBFAMILY NOT NAMEDcoord: 1..143
score: 8.3