CmoCh16G008080 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAGGCACCAAAATGTGGAGAGAAGGGAACGTTGGCCTTGAGAGAGAGAGAGGGGGCAAATCATTTTGTACGAAAAAGGTGGGAAAAGGCATTTTTATGGAGAATCTTCCATGGAACTACGCACAGCATTGATCGGTAATCCATTCTCGCTTGCAATCCAACAATGGATATTCAATTTTATATACATCCTCTTTCAATTCCCCTTTTCTTTCTAGACCGGAAGACATTCTTGTAAGCTAAGCAATCGCAGCCCAATCGCCACCGTGTTCCGTCTCCTTACCGTTGCTTTCTTTTCCCGGCGGTGCTGGTGGGTCGGGGGTATTTTCGAGGGAGGTCCGACCAAGCCTCTGCCTGATCGCTTCACCGTCATCTCAATCCTCCCTTCGATTCTTTTAACTCTTCCAAAACTGGTGGGTATATGTAATTTGTTGCTTATCATCTTTTAATTTCTTCGTTTTCGAGGCTTTTGTTATGTATTTCTCGATCATATCCGGAAACCCTAGTTTTTCGTCTTTTGCTTGCGATTCCCTTTTGCCCCCTTCTGTGTCTTGATTTTCGTCCTTCTTTTGATTTCTTTTGTTTTCTGATCGATGATGCTTGTCTCAATTTTAGATGTTTTTCGCTTGTATAATCATCCATATTTCGCCTTTGTTCGACTCGAAAAATTATGATTACTCTGCCGCGTCATTTGTTGTGGACCCTTTGGGTTGCTCCATGGCTATGTTCGTCTATTACATTTTTGCAGCTCTATCGAGGGACGTTGATTTGGTAACATACATGCTTGGGAACTTGATTCTTCCTGTTCAGTTTAAACATTTCAGTGACCACTTTTCATTCTTCCTGGATTACCTTTGTTTGAAGCAAAATGAAATTTGCATTACGAAATAATCAAATTCTATCATGTTTGTTTGCCATATTATGGACAATATTTTTTGTGAATCAGAATAGAAACGCTGCTATTTGTACGTAAGATTATAGGCTAGGATGAAATGTTAGAGAAAAAATTTGGATGGAAGTCATCACTTCAGAGATGGGTTAACTGACATGTTGAATCTCGTGAGATGCTTATATACCCTGAATTATGATTTTGTTAATTGCTGCTTATGCTCTGTCTTTACAAATAATAGACTCGAGGTTGTCGATCAACATGCACAAATCAATTGAAGAACTAGGTAAAAATGAAAATAGCAGGAATGAAGCATGTGAGAACAATGAATATGCAAGGCTAGTCATAGCTAATGAAGCAGGTCCTTTGGAATCAGAGATTCTACAGCCTCAAGATAAACTGAAAAGCAAATCACCCTTGAAGCGGTGGATCAAAATTTCACTATGGTGCATTGTTAGTATTGTATTTCTTCTTGTTTTCTTCAAGTGGGGAGTGCCATTTCTTTTTGAGAAGGTAATTCCCATTAATTACATCACCATTTTTTCTGTTTATAAGCTATCTTTCAGCTGAACTGTAGAAAATTTAACCTGTCCCTGTTATTTATTTTGAGAACTTTTTATTTTCTTTTTCATTTCTGCTGCTCATAGTACAGATATGCTTGCAAACCTATGCAACTAACTTCGATTTAATAATGAGTTTGAATGTGGAATAATCATATCTGCAACTTTTTTTCTTTTCTGTTAAATTTCTTTATAATATTCGTATCTGCAAATCTTAATGTTGGTTCGTGATAAGGGCATTCTTACTGGAAAAAGAAAGTAATTAGTAAATGTTTGCATCAGCTGTAAAGCATCAAAGCATCTTAGAGAATGCGAGTTTGGGGAGTGGGAGGATGAGGTTTTCCTCCTCCCTTGCATGTTTCTTTGTTCTACAAAATCTTTCCTTTCTATAAAGGAATCTGCTACTACATAAATGTTGATACAGAATCATTTTAATTTTAATAAAAAAGTAACCAAGAGTGTAGTAAAATCTGCATATAGTGCATTGCTAAAGAGGATTTTGTGGTTTGTGTTCTTTTAGTATTGTTGTAGGCACAAAATTAATATGCTTTGAAATGGGACATCATCTTGATTATTGTCTGTATTATTGGGAGAACTTCAGTACTTGTTCTACAGTGGTCTCTAGAGCTTAAACTATGCTGATTGCAAATGCATGACCAAAATTATGTGATAAGGCAAAAAATTTGATGCAGAGAAGCAGTGATGAGCCGAGTGGTATCTTATTGTGACTTACGAATAAACCTACCGAATAATATTGTTCATTTGTCAATTAGAATACACATGACCTTTTTATGGTATTTTTAGTGTGTTTTGCTTTAAAAGTGTTCTATTGAATCTCTCACTCTCCGACGTCTGTACTTCCTATGATTTATTTGACCTCTATTTTTGCTCCCTGAGTTCATTTCAGGTCATCATCCCAATCATGAAGTGGGAAGCTACTGCCTTTCGTCGACCTATGCTTGCACTAATGCTTATTGCTTCTCTGGCATCCTTTCCCGTATTTTTTATTCCCTCTGGCCCTTCAATGTGGTTGGCTGGGATGATTTTTGGCTATGGCCTTGGGTTTGTTATAATAATGGTTGGAACAACTATTGGGATGGTCCTGCCATATTTAATTGGATTAATTTTCCGTGACCGCATTCATGTAAGACCTCTATCAGTTTTTTTTTTTTTCAAATTATCGTGGCAGATAACTGGACCTATACTTCACAATCTTTCATTTGGTTCTCTGATCTCTGTATATTCATTATTGTGCAGCTATGGTTAATGAGATGGCCTCGAAAAGCAGAAGTACTCAGGCTTGCTGGGGAAGGGAGCTGGTTTCGTCAGTTTCAAGTTGTTGCACTCTTCAGGGTTTCACCATTTCCCTACACTATTTTCAATTATGCAATTGTGGTAACAAGTATGAGATTTTGGCCCTATTTGTGCGGGTCCGTTGCAGGAATGATACCAGAGGCTTTCATTTACATTTACAGGTTTCTTTCTTAGTCCCTCGAACGACTTACTAATAATCGAAAAGAAAAGTTAATATGCTGGTGTGCATGAATATATAGAAAATAGGCCATTTTTTTTAGATTTACATGAATATTTTCAGGAATTGTGTTTCTGTCACTTCATATGAAACTAGAACATGTCTTAATTTTCTTAGATCATTCATATGAAACAGGAAGAATCTCTATCGAGATAACGATAATGATGGGGTGCATTTTATGGTTAATTCATAGATATTGCTATAACTGGAGTTCTTTAGATGGTAATGTAAGCTATCTCTAGATGGGACGTTCCGATTATTCAAGAAAACGAGAACTGTAAACAATGTTAACGTTTATCTAGTATTAATTCTTACTGCCATAATGCTTGTGCGGATGTAACCTTGTTATGCATAATCTGATATTTCCTTTCCCTAGACTTCTTTGCACTCGTTAACGTCGGCTAAACATATCAGCTTTACTTATATGCAGTGGTAGGCTAATGAGGACACTAGCAGATGTTCAATATGGAAAACATCGGCTCACGACTGTAGAGATTGTGTATAACGTCATCTCCTTCATCATCGCGATCGTCACTATTATTATTTTCACTGTTTATGCAAAAAAGATGCTGAACAACCTTCAAATGGAAGAAGATAATAGAAAGTATTCTGCCTCCCACCATGGTAGTTTCGAGGTAGAGAGTCTTTCGCACGAAAGGTACAAGTAGTTTGGTTTACTATCTAGATTGTCATTAGTGTAGGTTAGTTCCTGTAAAATTAATAATTAACCCAGACCATTCTGAATACACCACTGAATTAAGTTGTTCTTTAATGATTTTCAGGTTTACTTTATAAAAAAAAAAAAAAATTGTGATGATTTCTAAAGTAGTTCGAAAAATACGATAGCTGTTGGCTGGTCTGGAAATTGTGTGTTG AAAAAAAAAAAGGCACCAAAATGTGGAGAGAAGGGAACGTTGGCCTTGAGAGAGAGAGAGGGGGCAAATCATTTTGTACGAAAAAGGTGGGAAAAGGCATTTTTATGGAGAATCTTCCATGGAACTACGCACAGCATTGATCGACCGGAAGACATTCTTGTAAGCTAAGCAATCGCAGCCCAATCGCCACCGTGTTCCGTCTCCTTACCGTTGCTTTCTTTTCCCGGCGGTGCTGGTGGGTCGGGGGTATTTTCGAGGGAGGTCCGACCAAGCCTCTGCCTGATCGCTTCACCGTCATCTCAATCCTCCCTTCGATTCTTTTAACTCTTCCAAAACTGACTCGAGGTTGTCGATCAACATGCACAAATCAATTGAAGAACTAGGTAAAAATGAAAATAGCAGGAATGAAGCATGTGAGAACAATGAATATGCAAGGCTAGTCATAGCTAATGAAGCAGGTCCTTTGGAATCAGAGATTCTACAGCCTCAAGATAAACTGAAAAGCAAATCACCCTTGAAGCGGTGGATCAAAATTTCACTATGGTGCATTGTTAGTATTGTATTTCTTCTTGTTTTCTTCAAGTGGGGAGTGCCATTTCTTTTTGAGAAGGTCATCATCCCAATCATGAAGTGGGAAGCTACTGCCTTTCGTCGACCTATGCTTGCACTAATGCTTATTGCTTCTCTGGCATCCTTTCCCGTATTTTTTATTCCCTCTGGCCCTTCAATGTGGTTGGCTGGGATGATTTTTGGCTATGGCCTTGGGTTTGTTATAATAATGGTTGGAACAACTATTGGGATGGTCCTGCCATATTTAATTGGATTAATTTTCCGTGACCGCATTCATCTATGGTTAATGAGATGGCCTCGAAAAGCAGAAGTACTCAGGCTTGCTGGGGAAGGGAGCTGGTTTCGTCAGTTTCAAGTTGTTGCACTCTTCAGGGTTTCACCATTTCCCTACACTATTTTCAATTATGCAATTGTGGTAACAAGTATGAGATTTTGGCCCTATTTGTGCGGGTCCGTTGCAGGAATGATACCAGAGGCTTTCATTTACATTTACAGTGGTAGGCTAATGAGGACACTAGCAGATGTTCAATATGGAAAACATCGGCTCACGACTGTAGAGATTGTGTATAACGTCATCTCCTTCATCATCGCGATCGTCACTATTATTATTTTCACTGTTTATGCAAAAAAGATGCTGAACAACCTTCAAATGGAAGAAGATAATAGAAAGTATTCTGCCTCCCACCATGGTAGTTTCGAGGTAGAGAGTCTTTCGCACGAAAGGTACAAGTAGTTTGGTTTACTATCTAGATTGTCATTAGTGTAGGTTAGTTCCTGTAAAATTAATAATTAACCCAGACCATTCTGAATACACCACTGAATTAAGTTGTTCTTTAATGATTTTCAGGTTTACTTTATAAAAAAAAAAAAAAATTGTGATGATTTCTAAAGTAGTTCGAAAAATACGATAGCTGTTGGCTGGTCTGGAAATTGTGTGTTG ATGCACAAATCAATTGAAGAACTAGGTAAAAATGAAAATAGCAGGAATGAAGCATGTGAGAACAATGAATATGCAAGGCTAGTCATAGCTAATGAAGCAGGTCCTTTGGAATCAGAGATTCTACAGCCTCAAGATAAACTGAAAAGCAAATCACCCTTGAAGCGGTGGATCAAAATTTCACTATGGTGCATTGTTAGTATTGTATTTCTTCTTGTTTTCTTCAAGTGGGGAGTGCCATTTCTTTTTGAGAAGGTCATCATCCCAATCATGAAGTGGGAAGCTACTGCCTTTCGTCGACCTATGCTTGCACTAATGCTTATTGCTTCTCTGGCATCCTTTCCCGTATTTTTTATTCCCTCTGGCCCTTCAATGTGGTTGGCTGGGATGATTTTTGGCTATGGCCTTGGGTTTGTTATAATAATGGTTGGAACAACTATTGGGATGGTCCTGCCATATTTAATTGGATTAATTTTCCGTGACCGCATTCATCTATGGTTAATGAGATGGCCTCGAAAAGCAGAAGTACTCAGGCTTGCTGGGGAAGGGAGCTGGTTTCGTCAGTTTCAAGTTGTTGCACTCTTCAGGGTTTCACCATTTCCCTACACTATTTTCAATTATGCAATTGTGGTAACAAGTATGAGATTTTGGCCCTATTTGTGCGGGTCCGTTGCAGGAATGATACCAGAGGCTTTCATTTACATTTACAGTGGTAGGCTAATGAGGACACTAGCAGATGTTCAATATGGAAAACATCGGCTCACGACTGTAGAGATTGTGTATAACGTCATCTCCTTCATCATCGCGATCGTCACTATTATTATTTTCACTGTTTATGCAAAAAAGATGCTGAACAACCTTCAAATGGAAGAAGATAATAGAAAGTATTCTGCCTCCCACCATGGTAGTTTCGAGGTAGAGAGTCTTTCGCACGAAAGGTACAAGTAG
BLAST of CmoCh16G008080 vs. Swiss-Prot
Match: Y305_SYNY3 (TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0305 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.4e-10 Identity = 54/185 (29.19%), Postives = 94/185 (50.81%), Query Frame = 1
BLAST of CmoCh16G008080 vs. TrEMBL
Match: A0A142BTQ8_CUCME (Beta-1,3-glucanase 1 OS=Cucumis melo PE=2 SV=1) HSP 1 Score: 525.4 bits (1352), Expect = 4.8e-146 Identity = 267/312 (85.58%), Postives = 290/312 (92.95%), Query Frame = 1
BLAST of CmoCh16G008080 vs. TrEMBL
Match: A0A0A0L6T9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G113930 PE=4 SV=1) HSP 1 Score: 519.2 bits (1336), Expect = 3.4e-144 Identity = 267/312 (85.58%), Postives = 286/312 (91.67%), Query Frame = 1
BLAST of CmoCh16G008080 vs. TrEMBL
Match: I1MFX3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G124400 PE=4 SV=1) HSP 1 Score: 418.3 bits (1074), Expect = 8.2e-114 Identity = 215/309 (69.58%), Postives = 255/309 (82.52%), Query Frame = 1
BLAST of CmoCh16G008080 vs. TrEMBL
Match: A0A0B2Q304_GLYSO (TVP38/TMEM64 family membrane protein OS=Glycine soja GN=glysoja_012422 PE=4 SV=1) HSP 1 Score: 418.3 bits (1074), Expect = 8.2e-114 Identity = 215/309 (69.58%), Postives = 255/309 (82.52%), Query Frame = 1
BLAST of CmoCh16G008080 vs. TrEMBL
Match: D7TGI0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0035g02270 PE=4 SV=1) HSP 1 Score: 417.2 bits (1071), Expect = 1.8e-113 Identity = 216/315 (68.57%), Postives = 258/315 (81.90%), Query Frame = 1
BLAST of CmoCh16G008080 vs. TAIR10
Match: AT2G02370.1 (AT2G02370.1 SNARE associated Golgi protein family) HSP 1 Score: 385.6 bits (989), Expect = 3.0e-107 Identity = 197/272 (72.43%), Postives = 228/272 (83.82%), Query Frame = 1
BLAST of CmoCh16G008080 vs. TAIR10
Match: AT1G12450.1 (AT1G12450.1 SNARE associated Golgi protein family) HSP 1 Score: 223.0 bits (567), Expect = 2.6e-58 Identity = 117/276 (42.39%), Postives = 175/276 (63.41%), Query Frame = 1
BLAST of CmoCh16G008080 vs. TAIR10
Match: AT4G22850.1 (AT4G22850.1 SNARE associated Golgi protein family) HSP 1 Score: 208.8 bits (530), Expect = 5.0e-54 Identity = 110/273 (40.29%), Postives = 170/273 (62.27%), Query Frame = 1
BLAST of CmoCh16G008080 vs. TAIR10
Match: AT4G12000.1 (AT4G12000.1 SNARE associated Golgi protein family) HSP 1 Score: 201.4 bits (511), Expect = 8.0e-52 Identity = 99/237 (41.77%), Postives = 153/237 (64.56%), Query Frame = 1
BLAST of CmoCh16G008080 vs. TAIR10
Match: AT1G22850.1 (AT1G22850.1 SNARE associated Golgi protein family) HSP 1 Score: 61.6 bits (148), Expect = 9.9e-10 Identity = 44/141 (31.21%), Postives = 76/141 (53.90%), Query Frame = 1
BLAST of CmoCh16G008080 vs. NCBI nr
Match: gi|659102528|ref|XP_008452180.1| (PREDICTED: uncharacterized protein LOC103493278 [Cucumis melo]) HSP 1 Score: 525.4 bits (1352), Expect = 6.8e-146 Identity = 267/312 (85.58%), Postives = 290/312 (92.95%), Query Frame = 1
BLAST of CmoCh16G008080 vs. NCBI nr
Match: gi|449431916|ref|XP_004133746.1| (PREDICTED: uncharacterized protein LOC101213801 [Cucumis sativus]) HSP 1 Score: 519.2 bits (1336), Expect = 4.9e-144 Identity = 267/312 (85.58%), Postives = 286/312 (91.67%), Query Frame = 1
BLAST of CmoCh16G008080 vs. NCBI nr
Match: gi|571514108|ref|XP_006597029.1| (PREDICTED: uncharacterized protein LOC100792235 isoform X1 [Glycine max]) HSP 1 Score: 418.3 bits (1074), Expect = 1.2e-113 Identity = 215/309 (69.58%), Postives = 255/309 (82.52%), Query Frame = 1
BLAST of CmoCh16G008080 vs. NCBI nr
Match: gi|225469876|ref|XP_002270145.1| (PREDICTED: uncharacterized protein LOC100241548 [Vitis vinifera]) HSP 1 Score: 417.2 bits (1071), Expect = 2.6e-113 Identity = 216/315 (68.57%), Postives = 258/315 (81.90%), Query Frame = 1
BLAST of CmoCh16G008080 vs. NCBI nr
Match: gi|363806994|ref|NP_001242573.1| (uncharacterized protein LOC100792235 [Glycine max]) HSP 1 Score: 417.2 bits (1071), Expect = 2.6e-113 Identity = 214/309 (69.26%), Postives = 254/309 (82.20%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |