Csa3G113930 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCCCTGCTCTTCCTTTTCCTCCTCCCCTCTCCGGTGGGTCGCCACCCTTTTCGACCGACTTCCGACCAACCCTCTCTTTGATTCTTTTCACCTTCTCCTCAATCCTCCACAACTTCTTTTAACTCTTCCATAACTGGTGGGTATCTGTAATTTGTTGCTCACCTTCTTTTTATTTTTTTCTTTTTATTTATTTTTTCTTTTCCAGTACTACTCGATCATATCTCCAAACCCTAGTTTTTCGTCTTCTTCTCTTGATTCCCCTTACCCCCTTTTCTTTGATTTCTATTGTCTTTTGATCTGTGATGCTTAATTTTACTTTTTTTTTTCCGACTTTACTAATTTGTAATTACCCTGCTGCTTCTCACCAAGCTAAGAGAATTTCTTGGAGGGGACGCTTTTGGGTTGTTTCATGGCTGTGTTCACTTTTGCATGTCATCTTCCTCTTTTGTGTTGTCTTTATGGGAGTAAATAGTTTGAAGTATATTTCTTTCTTCCAGCTCCTTCATCTTTATGTTGCTTCAAAATCTTGGGACGTTGATTTGTTGAGTGACATGCATGCTTGAGAACTTGATTCTACCTGTTGAGCATAAAAGTTTCAGTGACCACTTTTATTCTTTCTGGATTACTTCTGTTTGTAGTCAAATGAGCTTTGCCTTACAAAATAATAGCTTCAAATTCCGCCATATTTGTTTATAATATCATTGGGAATAGTTTTTTTCTTTTTTTTTGAATCGGTAATTCAAACGTTTGTACCACAGTCATGGCTGCTATGTGTATGTTTGATTACGTGGTAGGATGAAATATTAGAGAAATTTTGTGATGAAAGTCGTCAATTTAGAGATGGTTTACTACTACGTTAAATCTGCTGATGCTCCTGTATACCCTGAATTATTATTTTAAAAATTGCTGCTTATGCTGTCTTAGGCTCCAGGTTGTTGATCAACATGCTCAAATCAACGGAAGAACTAGGTGAAAATGGAAGTAGGAGGCATGAAACAAGTGAGAACAATGAATATGTAAGGCTGGTCATTGCCAATGAAACAATTCCTTTGGAATTAGAGATTCTACAGCCTCAAGAAAAATCAGAAAACACATTTTCTTTGAAGTGGTGGATCAAAGTCTCACTATGGAGCATTATTAGTATTGTATTTCTTCTTGCTTTCTTCAAGTGGGGAGTGCCCTTTCTTTTTGAGAAGGTAGTTCCCCTTAATTTACATAGCCTTTTTTCCTGTTTATATCCTATATTTCAGTTGAACTGCAGTTGGTTTAATCTGTCCCTGTTACTTGTATTTAGATTTCCCGCTTTGTTCTCATAATGTTTGATATACTTGCAAACTTGTGCAACTAAGTTTGCTTGAATATAAAATAACCATATCTGCAACTTGATATATATAACCATTGTCATATTTGCAAATCTTAATGTTGGTTCGTGATAAGAGCATTCTTACTGGAAATAGAAAGTAATTAGTATTTGATTACCTTAGCTCTAAAGCATCAAATCATCTTAAAGAATGCAAATTTGTAGAGCTGATTTTAATCTTTTTGACTTTTGGAGGGTAGGACTGGGAGGATGAGGTCGTTTTCCCCTCTTATAAACATCTTTCTTTTCCTTTTTAAAAAGAAATGTAATTATTAAACCACCAATTCACCCAAAAGCTTAAGCTAGTGGTTGAAGGCAAATTTAATATATCACCAACAGTAATATTACATGAATTGCTTTCTGCACTATGCCAGATTGGCTGAAAACGAGTTGTTGCTTCCAAACTACTGTTGATACGGCACCATTTTGATTTGAATAAAAAAGTAATAAGCAAGAGTGTTGTAAAATATGCCTATACAACAAGGATGGTCTATTTCATTGTTGAAGAGGATTTTGTGCTTGGGGGTTCTTTAGTATTGTTTGTAGGTGCAAAATTCATATACTTCGAAATGGGATTTCATCGTGATTATTGTGTGTATTATTGGGAGAACTTCGGTACTTGTTCAACCGAGGTCTCTAGAGCTCAAACTATTCTGATTGCAGAGGCATGACCAAAATTATGTGACAAAACAAACATTTTAATGTAGTGAAGATATAATCAGCTAAACGGTATATTGTAATGAGTTTTGAATTTTACTGTATGATTTTGTTCACTTGTCCAGAATATGCATGGCCTTTTTATGGTGTTTTTAGTGATTTCTGCCAATTGAATCTCTCTCTCTAACGTCTGTTCTTCCTATGATTTATTTGACCTTTTTTTTTTAATCACTGGGTTCATTTCAGGTTATCATCCCAATCATGAAGTGGGAAGCTACTGCCTTTGGTAGACCTATGCTTGCACTAATGCTTGTGGCTTCTCTGGCATTATTTCCCGTATTTTTTATTCCCTCTGGCCCTTCAATGTGGTTGGCGGGTATGATCTTTGGCTATGGCCTTGGGTTCGTTATAATAATGGTTGGAACAACTATTGGGATGGTCCTGCCATATTTAATTGGATTACTTTTCCGTGATCGAATTCATGTAAGACTTCTATCAGTTTTTTTTTTTTTTCAAATTATCCTGGTGGACAACTGGAGCCATACTTTGTAATCTTTCAACTGGAGCCATGCTTTATTTCTATAATCTTTCATTTGGTTTCCTGATCTTTGTTAATTCGTTATTGTGCAGCAATGGTTAATGAGATGGCCTAAGAAAGCTGAAATGCTCCGGCTTGCTGGGGAAGGGAGCTGGTTTCGTCAGTTTCAAGTTGTTGCACTCTTTAGGGTTTCACCATTTCCCTACACTATTTTCAATTATGCAATTGTCGTAACAAGTATGAGGTTTTGGCCCTACTTGTGCGGGTCAATTGCAGGAATGATACCTGAGGCTTTCATTTACATTTACAGGTTTCTTTCTTAATTCCTTGGATGACTTACCCGAGAATGGAGAAGAAGTTAATTTGTTTGCATGCATATTCATATAGAAAATAAGCCATCATGTTTATATTTACACGTTCTTTCAAGAATTGTGGATCTGTTTTACCATACAAAACTAGAAAGCATCTCAAATTGCTTAGATTATTCATATGAAACAGGAATAATCTATTGAGATTATTTATATATTGCTATAGTTAGAATGTTTAAGGTGATAATATGCGTAAGCTATCTATTCCATTCTCATCATTTATGTCAAAGGATCTTCTTTAATCCTCAGTTATCTCAGACATGAGTGATGCAGTTGATCTTGTACATTTTTTTTATCACAGGATGTTTTCATTATTAAAGTAAAAAATAACTGTGAACAATGTCAACTTTTGTTTTAGTGTTAATATTCCCAATTTCTCAATGTCATATACTTGTGTGAATCTGGGCAAATAAATGTAATCTTGTTTTGCATAATCGGATGCTTATTTCTGCAGTGTTCTTTGCACTCGTTAACATATGCTAAATAGGCTTTACTTTTATGCAGTGGTCGGCTAATGAGGACACTAGCAGATGTACAATATGGAAAACAGCATCTGACAACTGTTGAGATTGTGTATAACGTCATCTCCTTTATCATCGCCATCATCACTATTGTTATTTTCACTGTTTATGCAAAAAGGATGCTGAACAGCCTTCAAATGGCAGAAGATGATAGAAAGTATTCGGTCTCCCACCCTGGCTGTTTTGAGGTGGAGAATCTTTCACATGAAAGGTACAAGTAGTTTGGTTTACTATCTGTTGGTGGACTCACTTGGATTAGATGTAGGTTAGTTTCTCCAAAATTAACAATTAACCCAAAGTATTCTGAACACTTCTACTGAATTTAGTTGTATGTAAAGGTTTTCAGGCTCTTAGGCTTAAATTTACTTACCCTACAAACTGTTTCCCCTATTCCTTTCCTTTTTCCATCCCCAACGAATCTTTAGAATGTTGAAGAATAGGGTTCATGTAATGGAAATGGGTTTGTGAGTCTGGTTGATTTGAGAGGAAGAGGGGGGAAAAGGAATTTTGGGATGATTTATTTCTAAAGTACTACATACGGTAGCTGTCAGCTGACTTTGAAATTGTGTATTTAATTCATGAATTTGTACTATCAGCACCGAGACCATTTCTTTAAGGGGTGTGAACTTTTTCAAAATATAAAGTATGGGCTTGGGGGTTGTCATTGGACCCTATAAGAACCCACGTTCTTTCTCTGCAAAGAACAAAGAAACAGAGTAAAATTCTTGTAAAGAGAAATAGAA ATGCTCAAATCAACGGAAGAACTAGGTGAAAATGGAAGTAGGAGGCATGAAACAAGTGAGAACAATGAATATGTAAGGCTGGTCATTGCCAATGAAACAATTCCTTTGGAATTAGAGATTCTACAGCCTCAAGAAAAATCAGAAAACACATTTTCTTTGAAGTGGTGGATCAAAGTCTCACTATGGAGCATTATTAGTATTGTATTTCTTCTTGCTTTCTTCAAGTGGGGAGTGCCCTTTCTTTTTGAGAAGGTTATCATCCCAATCATGAAGTGGGAAGCTACTGCCTTTGGTAGACCTATGCTTGCACTAATGCTTGTGGCTTCTCTGGCATTATTTCCCGTATTTTTTATTCCCTCTGGCCCTTCAATGTGGTTGGCGGGTATGATCTTTGGCTATGGCCTTGGGTTCGTTATAATAATGGTTGGAACAACTATTGGGATGGTCCTGCCATATTTAATTGGATTACTTTTCCGTGATCGAATTCATCAATGGTTAATGAGATGGCCTAAGAAAGCTGAAATGCTCCGGCTTGCTGGGGAAGGGAGCTGGTTTCGTCAGTTTCAAGTTGTTGCACTCTTTAGGGTTTCACCATTTCCCTACACTATTTTCAATTATGCAATTGTCGTAACAAGTATGAGGTTTTGGCCCTACTTGTGCGGGTCAATTGCAGGAATGATACCTGAGGCTTTCATTTACATTTACAGTGGTCGGCTAATGAGGACACTAGCAGATGTACAATATGGAAAACAGCATCTGACAACTGTTGAGATTGTGTATAACGTCATCTCCTTTATCATCGCCATCATCACTATTGTTATTTTCACTGTTTATGCAAAAAGGATGCTGAACAGCCTTCAAATGGCAGAAGATGATAGAAAGTATTCGGTCTCCCACCCTGGCTGTTTTGAGGTGGAGAATCTTTCACATGAAAGGTACAAGTAG ATGCTCAAATCAACGGAAGAACTAGGTGAAAATGGAAGTAGGAGGCATGAAACAAGTGAGAACAATGAATATGTAAGGCTGGTCATTGCCAATGAAACAATTCCTTTGGAATTAGAGATTCTACAGCCTCAAGAAAAATCAGAAAACACATTTTCTTTGAAGTGGTGGATCAAAGTCTCACTATGGAGCATTATTAGTATTGTATTTCTTCTTGCTTTCTTCAAGTGGGGAGTGCCCTTTCTTTTTGAGAAGGTTATCATCCCAATCATGAAGTGGGAAGCTACTGCCTTTGGTAGACCTATGCTTGCACTAATGCTTGTGGCTTCTCTGGCATTATTTCCCGTATTTTTTATTCCCTCTGGCCCTTCAATGTGGTTGGCGGGTATGATCTTTGGCTATGGCCTTGGGTTCGTTATAATAATGGTTGGAACAACTATTGGGATGGTCCTGCCATATTTAATTGGATTACTTTTCCGTGATCGAATTCATCAATGGTTAATGAGATGGCCTAAGAAAGCTGAAATGCTCCGGCTTGCTGGGGAAGGGAGCTGGTTTCGTCAGTTTCAAGTTGTTGCACTCTTTAGGGTTTCACCATTTCCCTACACTATTTTCAATTATGCAATTGTCGTAACAAGTATGAGGTTTTGGCCCTACTTGTGCGGGTCAATTGCAGGAATGATACCTGAGGCTTTCATTTACATTTACAGTGGTCGGCTAATGAGGACACTAGCAGATGTACAATATGGAAAACAGCATCTGACAACTGTTGAGATTGTGTATAACGTCATCTCCTTTATCATCGCCATCATCACTATTGTTATTTTCACTGTTTATGCAAAAAGGATGCTGAACAGCCTTCAAATGGCAGAAGATGATAGAAAGTATTCGGTCTCCCACCCTGGCTGTTTTGAGGTGGAGAATCTTTCACATGAAAGGTACAAGTAG MLKSTEELGENGSRRHETSENNEYVRLVIANETIPLELEILQPQEKSENTFSLKWWIKVSLWSIISIVFLLAFFKWGVPFLFEKVIIPIMKWEATAFGRPMLALMLVASLALFPVFFIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYLIGLLFRDRIHQWLMRWPKKAEMLRLAGEGSWFRQFQVVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSIAGMIPEAFIYIYSGRLMRTLADVQYGKQHLTTVEIVYNVISFIIAIITIVIFTVYAKRMLNSLQMAEDDRKYSVSHPGCFEVENLSHERYK*
BLAST of Csa3G113930 vs. Swiss-Prot
Match: Y305_SYNY3 (TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0305 PE=3 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.2e-13 Identity = 53/185 (28.65%), Postives = 90/185 (48.65%), Query Frame = 1
BLAST of Csa3G113930 vs. Swiss-Prot
Match: TVP38_YEAS7 (Golgi apparatus membrane protein TVP38 OS=Saccharomyces cerevisiae (strain YJM789) GN=TVP38 PE=3 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.4e-06 Identity = 73/307 (23.78%), Postives = 141/307 (45.93%), Query Frame = 1
BLAST of Csa3G113930 vs. Swiss-Prot
Match: TVP38_YEAST (Golgi apparatus membrane protein TVP38 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TVP38 PE=1 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.4e-06 Identity = 73/307 (23.78%), Postives = 141/307 (45.93%), Query Frame = 1
BLAST of Csa3G113930 vs. TrEMBL
Match: A0A0A0L6T9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G113930 PE=4 SV=1) HSP 1 Score: 714.9 bits (1844), Expect = 4.8e-203 Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 1
BLAST of Csa3G113930 vs. TrEMBL
Match: A0A142BTQ8_CUCME (Beta-1,3-glucanase 1 OS=Cucumis melo PE=2 SV=1) HSP 1 Score: 696.8 bits (1797), Expect = 1.4e-197 Identity = 346/356 (97.19%), Postives = 351/356 (98.60%), Query Frame = 1
BLAST of Csa3G113930 vs. TrEMBL
Match: W9QGB1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016502 PE=4 SV=1) HSP 1 Score: 451.1 bits (1159), Expect = 1.3e-123 Identity = 222/312 (71.15%), Postives = 257/312 (82.37%), Query Frame = 1
BLAST of Csa3G113930 vs. TrEMBL
Match: D7TGI0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0035g02270 PE=4 SV=1) HSP 1 Score: 448.7 bits (1153), Expect = 6.4e-123 Identity = 220/313 (70.29%), Postives = 256/313 (81.79%), Query Frame = 1
BLAST of Csa3G113930 vs. TrEMBL
Match: B9S077_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1299920 PE=4 SV=1) HSP 1 Score: 448.7 bits (1153), Expect = 6.4e-123 Identity = 219/316 (69.30%), Postives = 256/316 (81.01%), Query Frame = 1
BLAST of Csa3G113930 vs. TAIR10
Match: AT2G02370.1 (AT2G02370.1 SNARE associated Golgi protein family) HSP 1 Score: 410.2 bits (1053), Expect = 1.3e-114 Identity = 204/301 (67.77%), Postives = 237/301 (78.74%), Query Frame = 1
BLAST of Csa3G113930 vs. TAIR10
Match: AT1G12450.1 (AT1G12450.1 SNARE associated Golgi protein family) HSP 1 Score: 240.4 bits (612), Expect = 1.8e-63 Identity = 112/234 (47.86%), Postives = 156/234 (66.67%), Query Frame = 1
BLAST of Csa3G113930 vs. TAIR10
Match: AT4G22850.1 (AT4G22850.1 SNARE associated Golgi protein family) HSP 1 Score: 231.5 bits (589), Expect = 8.2e-61 Identity = 109/280 (38.93%), Postives = 171/280 (61.07%), Query Frame = 1
BLAST of Csa3G113930 vs. TAIR10
Match: AT4G12000.1 (AT4G12000.1 SNARE associated Golgi protein family) HSP 1 Score: 228.4 bits (581), Expect = 6.9e-60 Identity = 105/241 (43.57%), Postives = 155/241 (64.32%), Query Frame = 1
BLAST of Csa3G113930 vs. TAIR10
Match: AT1G22850.1 (AT1G22850.1 SNARE associated Golgi protein family) HSP 1 Score: 68.9 bits (167), Expect = 7.0e-12 Identity = 44/141 (31.21%), Postives = 75/141 (53.19%), Query Frame = 1
BLAST of Csa3G113930 vs. NCBI nr
Match: gi|449431916|ref|XP_004133746.1| (PREDICTED: uncharacterized protein LOC101213801 [Cucumis sativus]) HSP 1 Score: 714.9 bits (1844), Expect = 6.9e-203 Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 1
BLAST of Csa3G113930 vs. NCBI nr
Match: gi|659102528|ref|XP_008452180.1| (PREDICTED: uncharacterized protein LOC103493278 [Cucumis melo]) HSP 1 Score: 696.8 bits (1797), Expect = 1.9e-197 Identity = 346/356 (97.19%), Postives = 351/356 (98.60%), Query Frame = 1
BLAST of Csa3G113930 vs. NCBI nr
Match: gi|703070154|ref|XP_010088716.1| (hypothetical protein L484_016502 [Morus notabilis]) HSP 1 Score: 451.1 bits (1159), Expect = 1.9e-123 Identity = 222/312 (71.15%), Postives = 257/312 (82.37%), Query Frame = 1
BLAST of Csa3G113930 vs. NCBI nr
Match: gi|1009143106|ref|XP_015889085.1| (PREDICTED: uncharacterized protein LOC107423941 [Ziziphus jujuba]) HSP 1 Score: 449.9 bits (1156), Expect = 4.1e-123 Identity = 220/311 (70.74%), Postives = 257/311 (82.64%), Query Frame = 1
BLAST of Csa3G113930 vs. NCBI nr
Match: gi|571514108|ref|XP_006597029.1| (PREDICTED: uncharacterized protein LOC100792235 isoform X1 [Glycine max]) HSP 1 Score: 449.5 bits (1155), Expect = 5.4e-123 Identity = 221/309 (71.52%), Postives = 253/309 (81.88%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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