CsaV3_3G006850 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGAAAAATAAAAAAGAAAGAAAAGAAGAGGAAAAGGTATTTTTGTGGGGAATCTTCCATGGAAGTACGAACGCACAGCATTGAGCGGTGTAGCGCAACAGAATCAATTTCTCATTTTTCCTTTTTATTATTTCTCTACTTTCAACTTCTTGCTTTCAATTCCTTCTTTCTTTCCTTTTTTCTTTTTCTTATTCATTCTTAATCAGCAAACACATTCTTGTAAGCAAAGCAATCGCCCATTTCCCAACTTCTCTCTCTCTCTCTCTCTCTCCCTGCTCTTCCTTTTCCTCCTCCCCTCTCCGGTGGGTCGCCACCCTTTTCGACCGACTTCCGACCAACCCTCTCTTTGATTCTTTTCACCTTCTCCTCAATCCTCCACAACTTCTTTTAACTCTTCCATAACTGGTGGGTATCTGTAATTTGTTGCTCACCTTCTTTTTATTTTTTTCTTTTTATTTATTTTTTCTTTTCCAGTACTACTCGATCATATCTCCAAACCCTAGTTTTTCGTCTTCTTCTCTTGATTCCCCTTACCCCCTTTTCTTTGATTTCTATTGTCTTTTGATCTGTGATGCTTAATTTTACTTTTTTTTTTCCGACTTTACTAATTTGTAATTACCCTGCTGCTTCTCACCAAGCTAAGAGAATTTCTTGGAGGGGACGCTTTTGGGTTGTTTCATGGCTGTGTTCACTTTTGCATGTCATCTTCCTCTTTTGTGTTGTCTTTATGGGAGTAAATAGTTTGAAGTATATTTCTTTCTTCCAGCTCCTTCATCTTTATGTTGCTTCAAAATCTTGGGACGTTGATTTGTTGAGTGACATGCATGCTTGAGAACTTGATTCTACCTGTTGAGCATAAAAGTTTCAGTGACCACTTTTATTCTTTCTGGATTACTTCTGTTTGTAGTCAAATGAGCTTTGCCTTACAAAATAATAGCTTCAAATTCCGCCATATTTGTTTATAATATCATTGGGAATAGTTTTTTTCTTTTTTTTTGAATCGGTAATTCAAACGTTTGTACCACAGTCATGGCTGCTATGTGTATGTTTGATTACGTGGTAGGATGAAATATTAGAGAAATTTTGTGATGAAAGTCGTCAATTTAGAGATGGTTTACTACTACGTTAAATCTGCTGATGCTCCTGTATACCCTGAATTATTATTTTAAAAATTGCTGCTTATGCTGTCTTAGGCTCCAGGTTGTTGATCAACATGCTCAAATCAACGGAAGAACTAGGTGAAAATGGAAGTAGGAGGCATGAAACAAGTGAGAACAATGAATATGTAAGGCTGGTCATTGCCAATGAAACAATTCCTTTGGAATTAGAGATTCTACAGCCTCAAGAAAAATCAGAAAACACATTTTCTTTGAAGTGGTGGATCAAAGTCTCACTATGGAGCATTATTAGTATTGTATTTCTTCTTGCTTTCTTCAAGTGGGGAGTGCCCTTTCTTTTTGAGAAGGTAGTTCCCCTTAATTTACATAGCCTTTTTTCCTGTTTATATCCTATATTTCAGTTGAACTGCAGTTGGTTTAATCTGTCCCTGTTACTTGTATTTAGATTTCCCGCTTTGTTCTCATAATGTTTGATATACTTGCAAACTTGTGCAACTAAGTTTGCTTGAATATAAAATAACCATATCTGCAACTTGATATATATAACCATTGTCATATTTGCAAATCTTAATGTTGGTTCGTGATAAGAGCATTCTTACTGGAAATAGAAAGTAATTAGTATTTGATTACCTTAGCTCTAAAGCATCAAATCATCTTAAAGAATGCAAATTTGTAGAGCTGATTTTAATCTTTTTGACTTTTGGAGGGTAGGACTGGGAGGATGAGGTCGTTTTCCCCTCTTATAAACATCTTTCTTTTCCTTTTTAAAAAGAAATGTAATTATTAAACCACCAATTCACCCAAAAGCTTAAGCTAGTGGTTGAAGGCAAATTTAATATATCACCAACAGTAATATTACATGAATTGCTTTCTGCACTATGCCAGATTGGCTGAAAACGAGTTGTTGCTTCCAAACTACTGTTGATACGGCACCATTTTGATTTGAATAAAAAAGTAATAAGCAAGAGTGTTGTAAAATATGCCTATACAACAAGGATGGTCTATTTCATTGTTGAAGAGGATTTTGTGCTTGGGGGTTCTTTAGTATTGTTTGTAGGTGCAAAATTCATATACTTCGAAATGGGATTTCATCGTGATTATTGTGTGTATTATTGGGAGAACTTCGGTACTTGTTCAACCGAGGTCTCTAGAGCTCAAACTATTCTGATTGCAGAGGCATGACCAAAATTATGTGACAAAACAAACATTTTAATGTAGTGAAGATATAATCAGCTAAACGGTATATTGTAATGAGTTTTGAATTTTACTGTATGATTTTGTTCACTTGTCCAGAATATGCATGGCCTTTTTATGGTGTTTTTAGTGATTTCTGCCAATTGAATCTCTCTCTCTAACGTCTGTTCTTCCTATGATTTATTTGACCTTTTTTTTTTAATCACTGGGTTCATTTCAGGTTATCATCCCAATCATGAAGTGGGAAGCTACTGCCTTTGGTAGACCTATGCTTGCACTAATGCTTGTGGCTTCTCTGGCATTATTTCCCGTATTTTTTATTCCCTCTGGCCCTTCAATGTGGTTGGCGGGTATGATCTTTGGCTATGGCCTTGGGTTCGTTATAATAATGGTTGGAACAACTATTGGGATGGTCCTGCCATATTTAATTGGATTACTTTTCCGTGATCGAATTCATGTAAGACTTCTATCAGTTTTTTTTTTTTTTTCAAATTATCCTGGTGGACAACTGGAGCCATACTTTGTAATCTTTCAACTGGAGCCATGCTTTATTTCTATAATCTTTCATTTGGTTTCCTGATCTTTGTTAATTCGTTATTGTGCAGCAATGGTTAATGAGATGGCCTAAGAAAGCTGAAATGCTCCGGCTTGCTGGGGAAGGGAGCTGGTTTCGTCAGTTTCAAGTTGTTGCACTCTTTAGGGTTTCACCATTTCCCTACACTATTTTCAATTATGCAATTGTCGTAACAAGTATGAGGTTTTGGCCCTACTTGTGCGGGTCAATTGCAGGAATGATACCTGAGGCTTTCATTTACATTTACAGGTTTCTTTCTTAATTCCTTGGATGACTTACCCGAGAATGGAGAAGAAGTTAATTTGTTTGCATGCATATTCATATAGAAAATAAGCCATCATGTTTATATTTACACGTTCTTTCAAGAATTGTGGATCTGTTTTACCATACAAAACTAGAAAGCATCTCAAATTGCTTAGATTATTCATATGAAACAGGAATAATCTATTGAGATTATTTATATATTGCTATAGTTAGAATGTTTAAGGTGATAATATGCGTAAGCTATCTATTCCATTCTCATCATTTATGTCAAAGGATCTTCTTTAATCCTCAGTTATCTCAGACATGAGTGATGCAGTTGATCTTGTACATTTTTTTTATCACAGGATGTTTTCATTATTAAAGTAAAAAATAACTGTGAACAATGTCAACTTTTGTTTTAGTGTTAATATTCCCAATTTCTCAATGTCATATACTTGTGTGAATCTGGGCAAATAAATGTAATCTTGTTTTGCATAATCGGATGCTTATTTCTGCAGTGTTCTTTGCACTCGTTAACATATGCTAAATAGGCTTTACTTTTATGCAGTGGTCGGCTAATGAGGACACTAGCAGATGTACAATATGGAAAACAGCATCTGACAACTGTTGAGATTGTGTATAACGTCATCTCCTTTATCATCGCCATCATCACTATTGTTATTTTCACTGTTTATGCAAAAAGGATGCTGAACAGCCTTCAAATGGCAGAAGATGATAGAAAGTATTCGGTCTCCCACCCTGGCTGTTTTGAGGTGGAGAATCTTTCACATGAAAGGTACAAGTAGTTTGGTTTACTATCTGTTGGTGGACTCACTTGGATTAGATGTAGGTTAGTTTCTCCAAAATTAACAATTAACCCAAAGTATTCTGAACACTTCTACTGAATTTAGTTGTATGTAAAGGTTTTCAGGCTCTTAGGCTTAAATTTACTTACCCTACAAACTGTTTCCCCTATTCCTTTCCTTTTTCCATCCCCAACGAATCTTTAGAATGTTGAAGAATAGGGTTCATGTAATGGAAATGGGTTTGTGAGTCTGGTTGATTTGAGAGGAAGAGGGGGGAAAAGGAATTTTGGGATGATTTATTTCTAAAGTACTACATACGGTAGCTGTCAGCTGACTTTGAAATTGTGTATTTAATTCATGAATTTGTACTATCAGCACCGAGACCATTTCTTTAAGGGGTGTGAACTTTTTCAAAATATAAAGTATGGGCTTGGGGGTTGTCATTGGACCCTATAAGAACCCACGTTCTTTCTCTGCAAAGAACAAAGAAACAGAGTAAAATTCTTGTAAAGAGAAATAGAACCACCTTCAATTAACTGTTACTACACAGTGAATCTTGATGACAAATTAAGTGAGTTAAAAATAAATCGTACAGGGTTCTAAGTCTAAGAACAACTACAGACATACAGTTATACCGTGTATTCTTAGCAACCTGCAAATTTAGGAGAAAAATATTCATTATTAGAACCATGTGCAGTTTGATATAGAATTCATCGAGAAACTAGGGAAGATTTACAATATTTTCATTAAGTCTAGCCAAATGACAATGGGAGGATACGTTGGTTGTCTATGTTCGTTTATATGAAACCTTACCATCCTGACTTAGAAGATGGGGTGTGCAGATCTCCAATCAATGTGATGAAG ATGCTCAAATCAACGGAAGAACTAGGTGAAAATGGAAGTAGGAGGCATGAAACAAGTGAGAACAATGAATATGTAAGGCTGGTCATTGCCAATGAAACAATTCCTTTGGAATTAGAGATTCTACAGCCTCAAGAAAAATCAGAAAACACATTTTCTTTGAAGTGGTGGATCAAAGTCTCACTATGGAGCATTATTAGTATTGTATTTCTTCTTGCTTTCTTCAAGTGGGGAGTGCCCTTTCTTTTTGAGAAGGTTATCATCCCAATCATGAAGTGGGAAGCTACTGCCTTTGGTAGACCTATGCTTGCACTAATGCTTGTGGCTTCTCTGGCATTATTTCCCGTATTTTTTATTCCCTCTGGCCCTTCAATGTGGTTGGCGGGTATGATCTTTGGCTATGGCCTTGGGTTCGTTATAATAATGGTTGGAACAACTATTGGGATGGTCCTGCCATATTTAATTGGATTACTTTTCCGTGATCGAATTCATCAATGGTTAATGAGATGGCCTAAGAAAGCTGAAATGCTCCGGCTTGCTGGGGAAGGGAGCTGGTTTCGTCAGTTTCAAGTTGTTGCACTCTTTAGGGTTTCACCATTTCCCTACACTATTTTCAATTATGCAATTGTCGTAACAAGTATGAGGTTTTGGCCCTACTTGTGCGGGTCAATTGCAGGAATGATACCTGAGGCTTTCATTTACATTTACAGTGGTCGGCTAATGAGGACACTAGCAGATGTACAATATGGAAAACAGCATCTGACAACTGTTGAGATTGTGTATAACGTCATCTCCTTTATCATCGCCATCATCACTATTGTTATTTTCACTGTTTATGCAAAAAGGATGCTGAACAGCCTTCAAATGGCAGAAGATGATAGAAAGTATTCGGTCTCCCACCCTGGCTGTTTTGAGGTGGAGAATCTTTCACATGAAAGGTACAAGTAG ATGCTCAAATCAACGGAAGAACTAGGTGAAAATGGAAGTAGGAGGCATGAAACAAGTGAGAACAATGAATATGTAAGGCTGGTCATTGCCAATGAAACAATTCCTTTGGAATTAGAGATTCTACAGCCTCAAGAAAAATCAGAAAACACATTTTCTTTGAAGTGGTGGATCAAAGTCTCACTATGGAGCATTATTAGTATTGTATTTCTTCTTGCTTTCTTCAAGTGGGGAGTGCCCTTTCTTTTTGAGAAGGTTATCATCCCAATCATGAAGTGGGAAGCTACTGCCTTTGGTAGACCTATGCTTGCACTAATGCTTGTGGCTTCTCTGGCATTATTTCCCGTATTTTTTATTCCCTCTGGCCCTTCAATGTGGTTGGCGGGTATGATCTTTGGCTATGGCCTTGGGTTCGTTATAATAATGGTTGGAACAACTATTGGGATGGTCCTGCCATATTTAATTGGATTACTTTTCCGTGATCGAATTCATCAATGGTTAATGAGATGGCCTAAGAAAGCTGAAATGCTCCGGCTTGCTGGGGAAGGGAGCTGGTTTCGTCAGTTTCAAGTTGTTGCACTCTTTAGGGTTTCACCATTTCCCTACACTATTTTCAATTATGCAATTGTCGTAACAAGTATGAGGTTTTGGCCCTACTTGTGCGGGTCAATTGCAGGAATGATACCTGAGGCTTTCATTTACATTTACAGTGGTCGGCTAATGAGGACACTAGCAGATGTACAATATGGAAAACAGCATCTGACAACTGTTGAGATTGTGTATAACGTCATCTCCTTTATCATCGCCATCATCACTATTGTTATTTTCACTGTTTATGCAAAAAGGATGCTGAACAGCCTTCAAATGGCAGAAGATGATAGAAAGTATTCGGTCTCCCACCCTGGCTGTTTTGAGGTGGAGAATCTTTCACATGAAAGGTACAAGTAG MLKSTEELGENGSRRHETSENNEYVRLVIANETIPLELEILQPQEKSENTFSLKWWIKVSLWSIISIVFLLAFFKWGVPFLFEKVIIPIMKWEATAFGRPMLALMLVASLALFPVFFIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYLIGLLFRDRIHQWLMRWPKKAEMLRLAGEGSWFRQFQVVALFRVSPFPYTIFNYAIVVTSMRFWPYLCGSIAGMIPEAFIYIYSGRLMRTLADVQYGKQHLTTVEIVYNVISFIIAIITIVIFTVYAKRMLNSLQMAEDDRKYSVSHPGCFEVENLSHERYK
BLAST of CsaV3_3G006850 vs. NCBI nr
Match: XP_004133746.1 (PREDICTED: uncharacterized protein LOC101213801 [Cucumis sativus] >XP_011650598.1 PREDICTED: uncharacterized protein LOC101213801 [Cucumis sativus] >KGN56302.1 hypothetical protein Csa_3G113930 [Cucumis sativus]) HSP 1 Score: 611.3 bits (1575), Expect = 1.8e-171 Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0
BLAST of CsaV3_3G006850 vs. NCBI nr
Match: NP_001315387.1 (uncharacterized LOC103493278 [Cucumis melo] >XP_008452180.1 PREDICTED: uncharacterized protein LOC103493278 [Cucumis melo] >XP_008452181.1 PREDICTED: uncharacterized protein LOC103493278 [Cucumis melo] >AMP41496.1 beta-1,3-glucanase 1 [Cucumis melo]) HSP 1 Score: 594.3 bits (1531), Expect = 2.3e-166 Identity = 303/312 (97.12%), Postives = 307/312 (98.40%), Query Frame = 0
BLAST of CsaV3_3G006850 vs. NCBI nr
Match: XP_022136361.1 (uncharacterized protein LOC111008092 [Momordica charantia] >XP_022136362.1 uncharacterized protein LOC111008092 [Momordica charantia] >XP_022136363.1 uncharacterized protein LOC111008092 [Momordica charantia]) HSP 1 Score: 531.2 bits (1367), Expect = 2.4e-147 Identity = 276/312 (88.46%), Postives = 286/312 (91.67%), Query Frame = 0
BLAST of CsaV3_3G006850 vs. NCBI nr
Match: XP_022975456.1 (uncharacterized protein LOC111474761 [Cucurbita maxima]) HSP 1 Score: 528.5 bits (1360), Expect = 1.6e-146 Identity = 273/312 (87.50%), Postives = 286/312 (91.67%), Query Frame = 0
BLAST of CsaV3_3G006850 vs. NCBI nr
Match: XP_023552048.1 (uncharacterized protein LOC111809841 isoform X4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 526.9 bits (1356), Expect = 4.6e-146 Identity = 269/312 (86.22%), Postives = 286/312 (91.67%), Query Frame = 0
BLAST of CsaV3_3G006850 vs. TAIR10
Match: AT2G02370.1 (SNARE associated Golgi protein family) HSP 1 Score: 391.3 bits (1004), Expect = 5.4e-109 Identity = 203/293 (69.28%), Postives = 236/293 (80.55%), Query Frame = 0
BLAST of CsaV3_3G006850 vs. TAIR10
Match: AT1G12450.1 (SNARE associated Golgi protein family) HSP 1 Score: 222.2 bits (565), Expect = 4.4e-58 Identity = 112/234 (47.86%), Postives = 158/234 (67.52%), Query Frame = 0
BLAST of CsaV3_3G006850 vs. TAIR10
Match: AT4G12000.1 (SNARE associated Golgi protein family) HSP 1 Score: 210.3 bits (534), Expect = 1.7e-54 Identity = 105/241 (43.57%), Postives = 157/241 (65.15%), Query Frame = 0
BLAST of CsaV3_3G006850 vs. TAIR10
Match: AT4G22850.1 (SNARE associated Golgi protein family) HSP 1 Score: 194.1 bits (492), Expect = 1.3e-49 Identity = 91/217 (41.94%), Postives = 143/217 (65.90%), Query Frame = 0
BLAST of CsaV3_3G006850 vs. TAIR10
Match: AT1G22850.1 (SNARE associated Golgi protein family) HSP 1 Score: 60.8 bits (146), Expect = 1.7e-09 Identity = 44/141 (31.21%), Postives = 77/141 (54.61%), Query Frame = 0
BLAST of CsaV3_3G006850 vs. Swiss-Prot
Match: sp|Q55909|Y305_SYNY3 (TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr0305 PE=3 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 9.5e-10 Identity = 53/185 (28.65%), Postives = 92/185 (49.73%), Query Frame = 0
BLAST of CsaV3_3G006850 vs. Swiss-Prot
Match: sp|Q6YI46|TMM64_HUMAN (Transmembrane protein 64 OS=Homo sapiens OX=9606 GN=TMEM64 PE=2 SV=2) HSP 1 Score: 51.6 bits (122), Expect = 1.8e-05 Identity = 39/139 (28.06%), Postives = 67/139 (48.20%), Query Frame = 0
BLAST of CsaV3_3G006850 vs. Swiss-Prot
Match: sp|Q3U145|TMM64_MOUSE (Transmembrane protein 64 OS=Mus musculus OX=10090 GN=Tmem64 PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.8e-05 Identity = 39/139 (28.06%), Postives = 68/139 (48.92%), Query Frame = 0
BLAST of CsaV3_3G006850 vs. TrEMBL
Match: tr|A0A0A0L6T9|A0A0A0L6T9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G113930 PE=4 SV=1) HSP 1 Score: 611.3 bits (1575), Expect = 1.2e-171 Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0
BLAST of CsaV3_3G006850 vs. TrEMBL
Match: tr|A0A142BTQ8|A0A142BTQ8_CUCME (Beta-1,3-glucanase 1 OS=Cucumis melo OX=3656 GN=LOC103493278 PE=2 SV=1) HSP 1 Score: 594.3 bits (1531), Expect = 1.5e-166 Identity = 303/312 (97.12%), Postives = 307/312 (98.40%), Query Frame = 0
BLAST of CsaV3_3G006850 vs. TrEMBL
Match: tr|A0A2P5DZG0|A0A2P5DZG0_9ROSA (Transmembrane protein OS=Trema orientalis OX=63057 GN=TorRG33x02_237380 PE=4 SV=1) HSP 1 Score: 440.3 bits (1131), Expect = 3.7e-120 Identity = 230/311 (73.95%), Postives = 262/311 (84.24%), Query Frame = 0
BLAST of CsaV3_3G006850 vs. TrEMBL
Match: tr|A0A2P5APJ6|A0A2P5APJ6_PARAD (Transmembrane protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_312230 PE=4 SV=1) HSP 1 Score: 436.4 bits (1121), Expect = 5.4e-119 Identity = 227/311 (72.99%), Postives = 261/311 (83.92%), Query Frame = 0
BLAST of CsaV3_3G006850 vs. TrEMBL
Match: tr|W9QGB1|W9QGB1_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_016502 PE=4 SV=1) HSP 1 Score: 432.2 bits (1110), Expect = 1.0e-117 Identity = 223/314 (71.02%), Postives = 258/314 (82.17%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |