CmoCh16G007270 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh16G007270
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionMitochondrial transcription termination factor family protein, putative
LocationCmo_Chr16 : 3625187 .. 3626362 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACGCGCTGAGATCATCGTTCTCTATTTCCTCTCGCCATAATCCTTCCTCCTTGCTCCGAATTGATCCGCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTCGTTCAATACCTTATTGATACCTTCGAACTCTCCCCCGCCAGAGCGGTGTCGATCATGAGGAGCCGCAGAGGCATTGAATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCAAAGCTCACATTCAATCGACGATACGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAAGACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATTTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCATTTCCAAGCATTCTACGCTTTTGACTGTTAGTTTGGAGAAGAAATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTGCAAGGTATGCAGCGATGTTGTGACAAGCTTATGCGATCTCCGTATACAAGGTTGCTTGTCAATATTAATTACTTACAAAGTTGCGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTAAGCGTGAATCTCAAGTTAGAGAAATTGTTTCCATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAACTAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGTTGGTAAACTTAAACGTGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGTAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAAGTCGAAGAGTCTATTGAAGAAACACCCGCAATTGCTTGATATATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCATGTGATAGAATTGTTGGCGGCCTTTAGAGGTCAATGTATGGATGAATTGCAGCCTAAGCAGTTGGAAACATGA

mRNA sequence

ATGTACGCGCTGAGATCATCGTTCTCTATTTCCTCTCGCCATAATCCTTCCTCCTTGCTCCGAATTGATCCGCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTCGTTCAATACCTTATTGATACCTTCGAACTCTCCCCCGCCAGAGCGGTGTCGATCATGAGGAGCCGCAGAGGCATTGAATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCAAAGCTCACATTCAATCGACGATACGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAAGACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATTTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCATTTCCAAGCATTCTACGCTTTTGACTGTTAGTTTGGAGAAGAAATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTGCAAGGTATGCAGCGATGTTGTGACAAGCTTATGCGATCTCCGTATACAAGGTTGCTTGTCAATATTAATTACTTACAAAGTTGCGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTAAGCGTGAATCTCAAGTTAGAGAAATTGTTTCCATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAACTAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGTTGGTAAACTTAAACGTGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGTAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAAGTCGAAGAGTCTATTGAAGAAACACCCGCAATTGCTTGATATATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCATGTGATAGAATTGTTGGCGGCCTTTAGAGGTCAATGTATGGATGAATTGCAGCCTAAGCAGTTGGAAACATGA

Coding sequence (CDS)

ATGTACGCGCTGAGATCATCGTTCTCTATTTCCTCTCGCCATAATCCTTCCTCCTTGCTCCGAATTGATCCGCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTCGTTCAATACCTTATTGATACCTTCGAACTCTCCCCCGCCAGAGCGGTGTCGATCATGAGGAGCCGCAGAGGCATTGAATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCAAAGCTCACATTCAATCGACGATACGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAAGACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATTTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCATTTCCAAGCATTCTACGCTTTTGACTGTTAGTTTGGAGAAGAAATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTGCAAGGTATGCAGCGATGTTGTGACAAGCTTATGCGATCTCCGTATACAAGGTTGCTTGTCAATATTAATTACTTACAAAGTTGCGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTAAGCGTGAATCTCAAGTTAGAGAAATTGTTTCCATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAACTAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGTTGGTAAACTTAAACGTGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGTAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAAGTCGAAGAGTCTATTGAAGAAACACCCGCAATTGCTTGATATATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCATGTGATAGAATTGTTGGCGGCCTTTAGAGGTCAATGTATGGATGAATTGCAGCCTAAGCAGTTGGAAACATGA
Homology
[Close]
BLAST of CmoCh16G007270 vs. TrEMBL
Match: A0A0A0KUB9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G036600 PE=4 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 3.3e-136
Identity = 263/402 (65.42%), Postives = 309/402 (76.87%), Query Frame = 1 

Query: 1   MYALRSSFSIS--SRHNPSSLLR-IDPLLYCFFSSSSHSQASAS---------------- 60
           MYA+  SFS+   S  NP   LR I P L+ FFSSSS S +S+S                
Sbjct: 1   MYAMYPSFSVCVPSPLNPPFFLRLIHPFLFSFFSSSSSSSSSSSSSSSSSSSSSSSSHSQ 60

Query: 61  -----YGIVVQYLIDTFELSPARAVSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQST 120
                YGIV+QYLIDTF+LSPARAVSIM +RRGI+STEKP+SVYKYLS+LG S   I+S 
Sbjct: 61  PPSHSYGIVLQYLIDTFQLSPARAVSIMATRRGIQSTEKPRSVYKYLSDLGLSDTQIKSA 120

Query: 121 IRLAPQIAFSNIEKTLKPKIEFFQNFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILK 180
           +R+ PQIAFS+IEKTLKPKIEF QN G VGSDL +FIS+ S   + SLEK LMP+VEILK
Sbjct: 121 VRITPQIAFSSIEKTLKPKIEFLQNLGFVGSDLSKFISRQSKFFSSSLEKTLMPNVEILK 180

Query: 181 SVFPKDECNSDLLQGMQRCCDKLMRSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFG 240
           +V PK  CN DL + ++RC D L RSPY  L VNINYL+SCGIV  QLS LLKRQPALF 
Sbjct: 181 NVLPKGTCNDDLPKVLRRCSDVLTRSPYKVLSVNINYLRSCGIVDYQLSTLLKRQPALFI 240

Query: 241 KRESQVREIVSMVVETGFSTNTKMFVHGLHAISSVTNATFKKKVELICSFGITEKECMRM 300
             ES++++ VSM V+ GFS N  MF+HGLH+ISS++NAT+KKKV+LICSFGITEKECMRM
Sbjct: 241 MHESRLKDFVSMAVKAGFSPNGTMFIHGLHSISSISNATYKKKVKLICSFGITEKECMRM 300

Query: 301 FTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKS 360
           F SAPVL+RTSVGKL+ GLEFFMNEA+VS+SDIVR P CLMHAM GRVLPRYRVL+V+KS
Sbjct: 301 FNSAPVLMRTSVGKLEVGLEFFMNEAKVSKSDIVRNPFCLMHAMHGRVLPRYRVLEVLKS 360

Query: 361 KSLLKKHPQLLDILGMSDEDFLDKFVHRFPDHVIELLAAFRG 379
           K L KK P+L+D L M DEDFLDKFV RFPD++ +L  AFRG
Sbjct: 361 KRLTKKLPKLIDSLWMPDEDFLDKFVRRFPDNMNDLFEAFRG 402

[Close]
BLAST of CmoCh16G007270 vs. TrEMBL
Match: D7SW46_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01450 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 7.6e-93
Identity = 182/365 (49.86%), Postives = 256/365 (70.14%), Query Frame = 1 

Query: 23  DPLLYCFFSSSSHSQASASYG---IVVQYLIDTFELSPARAVSIMRSRRGIESTEKPQSV 82
           +P L+   S SS   ++ S     I+V YLI TF  S   A SI       +STE PQSV
Sbjct: 4   NPALFNLLSLSSKRLSTLSSSPNPIIVNYLIQTFGFSQTLANSISNRFWWAKSTENPQSV 63

Query: 83  YKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNFGLVGSDLGRFISKHSTL 142
             +L +LGFS+AHI++++R+ PQI FS+I+KTLKPK++FF+  GLVG+DLG+FISK+S +
Sbjct: 64  IHFLRDLGFSEAHIRTSVRVGPQILFSDIDKTLKPKVQFFEQLGLVGADLGKFISKNSKV 123

Query: 143 LTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLMRSPYTRLLVNINYLQSCGI 202
           LT+SLEKKL+P +EILK     DE N DL++ ++RC   L R+P   LL NI +L+SCGI
Sbjct: 124 LTISLEKKLVPCIEILKKTLSDDENNGDLIRVLRRCTWVLSRNPEL-LLSNIAFLESCGI 183

Query: 203 VGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKMFVHGLHAISSVTNATFKKK 262
           VGSQLSMLL RQP LF  ++S ++++VS  V+ GFS  ++M V+ L+ IS + + T +KK
Sbjct: 184 VGSQLSMLLTRQPRLFVIKQSTLKDLVSRAVDMGFSIESRMLVYALYTISCLRDETLRKK 243

Query: 263 VELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHA 322
            EL  S+G TE+EC+ MF   P L+R S  KLK G+EFFMN  +  ++ +V +PT LM +
Sbjct: 244 FELFRSWGFTEQECIEMFRRTPGLLRASEEKLKLGMEFFMNTMKFEKTLLVHRPTILMLS 303

Query: 323 MQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDKFVHRFPDHVIELLAAFRGQ 382
           M+ RV+PRYRVLQ++KSK LLK+ P  +++L ++DE+FLDKF+ RF D   ELL A++G 
Sbjct: 304 MEDRVIPRYRVLQILKSKRLLKREPSFINVLSLTDEEFLDKFISRFADDAEELLVAYKGH 363

Query: 383 CMDEL 385
            + E+
Sbjct: 364 TLQEV 367

[Close]
BLAST of CmoCh16G007270 vs. TrEMBL
Match: B9T3X3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0169990 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 3.5e-90
Identity = 168/335 (50.15%), Postives = 240/335 (71.64%), Query Frame = 1 

Query: 48  YLIDTFELSPARAVSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSN 107
           YL+ + + S  +A +I      I+STEKPQSV+ +L  LG S +HIQS I  APQI F+N
Sbjct: 25  YLLKSLKFSETQAFTISNRFSHIKSTEKPQSVHYFLKNLGLSNSHIQSAIHGAPQILFAN 84

Query: 108 IEKTLKPKIEFFQNFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSD 167
           ++K LKPK++ FQ+ GLVG DLG+FISK+STLLT SL+KKL P VEILK +   DE N D
Sbjct: 85  VDKCLKPKVKLFQDLGLVGYDLGKFISKNSTLLTASLDKKLSPRVEILKRLLLNDENNKD 144

Query: 168 LLQGMQRCCDKLMRSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVS 227
           L++ + RC   + ++P +RLL N+ +L+SCGIVGSQLSMLL+RQP LF  +ES +R++VS
Sbjct: 145 LVKVLTRCNWIISKNPKSRLLSNVAFLESCGIVGSQLSMLLRRQPRLFIMQESALRDLVS 204

Query: 228 MVVETGFSTNTKMFVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTS 287
            V+  GFS N++M V+ L+ +S +++ TF KK+E++  FG +E EC  MF   P L+R+S
Sbjct: 205 QVLNMGFSVNSRMLVYALYTVSCMSHETFGKKIEILKKFGFSEYECTEMFRKQPGLLRSS 264

Query: 288 VGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLL 347
             KLK GL+FF+N  +  R  +V +PTCLM +M+ RV+PRY+VL+++K K LLKK P  +
Sbjct: 265 EKKLKLGLDFFINTIKFKREVLVYRPTCLMLSMEERVIPRYKVLEIMKLKKLLKKQPSFI 324

Query: 348 DILGMSDEDFLDKFVHRFPDHVIELLAAFRGQCMD 383
           ++L +++E+F+ KF+  FPD   ELL A+R   +D
Sbjct: 325 NVLNLTEEEFVQKFIASFPDDAEELLVAYRSHTLD 359

[Close]
BLAST of CmoCh16G007270 vs. TrEMBL
Match: M5W835_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015928mg PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.2e-85
Identity = 165/323 (51.08%), Postives = 226/323 (69.97%), Query Frame = 1 

Query: 45  VVQYLIDTFELSPARAVSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIA 104
           +  YLI TF+ +  +A SI      + S EKPQSV  +L ELGFS  HI+S +R +PQI 
Sbjct: 49  ITDYLISTFKFTKTQASSISNRFSWVTSPEKPQSVRSFLRELGFSDTHIRSAVRGSPQIL 108

Query: 105 FSNIEKTLKPKIEFFQNFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDEC 164
           FSNI+KTL+PK+EFFQ  GL  SDL   ISK+STLLTVSLE+KL+P +EILK +   DE 
Sbjct: 109 FSNIDKTLRPKLEFFQQLGLSSSDLASLISKNSTLLTVSLERKLVPCIEILKKILGNDEN 168

Query: 165 NSDLLQGMQRCCDKLMRSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRE 224
             DL++ + RC   + + P +RLL NI +++SCGIVGSQL+MLLKRQP LF  +ES +R 
Sbjct: 169 AKDLIRVLCRCNWVVRKDPESRLLGNIAFMESCGIVGSQLTMLLKRQPWLFIVQESVLRS 228

Query: 225 IVSMVVETGFSTNTKMFVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLI 284
           +VS V+E GFS N++M VH L+ +S + + T  +K++L+C FG +E ECM MF   P L+
Sbjct: 229 LVSRVLEMGFSLNSRMLVHALYTVSCLRSGTISRKLDLLCIFGFSEDECMEMFRRTPGLL 288

Query: 285 RTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHP 344
           RTS  KLK G++FF+N  +  +S ++  P  LM +M+ RV+ RYRVL+V+KSK LLK+ P
Sbjct: 289 RTSEEKLKLGIDFFLNTVKFKKSVLIHTPWILMFSMENRVIARYRVLEVIKSKRLLKRDP 348

Query: 345 QLLDILGMSDEDFLDKFVHRFPD 368
                L +++E+FLDKF+ RF D
Sbjct: 349 TFYGALVLTEEEFLDKFISRFRD 371

[Close]
BLAST of CmoCh16G007270 vs. TrEMBL
Match: A0A067F1I9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047553mg PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 3.0e-81
Identity = 163/354 (46.05%), Postives = 241/354 (68.08%), Query Frame = 1 

Query: 26  LYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMRSRRGIESTEKPQSVYKYLSE 85
           L+ FF+S S +  S ++ I + +LI T  +  +RA+ I      I+S EKP++V ++L  
Sbjct: 20  LFSFFASLSKTPNSTNF-IFLNFLIKTLNIPKSRALPISNKFSRIKSLEKPETVRQFLHN 79

Query: 86  LGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNFGLVGSDLGRFISKHSTLLTVSLE 145
           +GFS  HIQ T+   P I FS+++KTLKPKIEFFQ+ GLVGSDLG+FISK+ +L   SLE
Sbjct: 80  VGFSDTHIQLTVTSRPTILFSDVDKTLKPKIEFFQHLGLVGSDLGKFISKNPSLFAASLE 139

Query: 146 KKLMPSVEILKSVFPKDECNSDLLQGMQRCC-DKLMRSPYTRLLVNINYLQSCGIVGSQL 205
           +KL+P VEILK +   D  N DL +  +RCC + +M +  + LL NI YL+SCGIVGSQL
Sbjct: 140 RKLIPCVEILKKILVDDSNNEDLTRVFRRCCWNLIMDTEKSGLLRNIEYLKSCGIVGSQL 199

Query: 206 SMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKMFVHGLHAISSVTNATFKKKVELIC 265
           SMLL  QP LF  +E ++R +VS +++ GFSTN++MFV+GL  +S +   TF +K+EL  
Sbjct: 200 SMLLVWQPRLFCYKELKIRHLVSRLLDMGFSTNSRMFVYGLVVLSCLNEETFGRKLELFR 259

Query: 266 SFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRV 325
           S+G +++E ++MF  AP++++ S  +L+ GLEFF+ E E  +S +VR P CL  +++ RV
Sbjct: 260 SYGFSKEEVLQMFRKAPLILKASEERLQLGLEFFLKEIECEKSVLVRIPICLACSIENRV 319

Query: 326 LPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDKFVHRFPDHVIELLAAFRG 379
           +PRYRV Q++ S+ + KK      +L +S+ +FL KFV  F D   ELL +++G
Sbjct: 320 IPRYRVFQIIMSRGMFKKDCSFPSMLLLSEGNFLQKFVLSFGDDAEELLLSYKG 372

[Close]
BLAST of CmoCh16G007270 vs. TAIR10
Match: AT5G64950.1 (AT5G64950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 247.3 bits (630), Expect = 1.6e-65
Identity = 147/368 (39.95%), Postives = 228/368 (61.96%), Query Frame = 1 

Query: 21  RIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMRSRRGIESTEKPQSVY 80
           R D  L     SS+ + AS S    V++L D     P  A++I      ++S E+P+SV 
Sbjct: 17  RWDRALSLHHFSSNATPASISNPAFVEFLRDNGFQKPL-AIAIAMRYPNLKSLEQPRSVI 76

Query: 81  KYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNFGLVGSDLGRFISKHSTLL 140
           + L    FS   IQ +IR+ P++ F N+EK L+PK+ FF++ G  GS LG+F+S++S+++
Sbjct: 77  QMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVV 136

Query: 141 TVSLEKKLMPSVEILKSVF-PKDECNSDLLQGMQRCCDKLM-RSPYTRLLVNINYLQSCG 200
            VSL KKL+P+VEILKS+  PK E   DL   + RC   L+ R P   LL NI+YL++CG
Sbjct: 137 GVSLVKKLIPTVEILKSIVAPKHE---DLPVILSRCGWLLLSRDPNLFLLPNISYLETCG 196

Query: 201 IVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKMFVHGLHAISSVTNATFKK 260
           IVGSQL+ LL+RQP +F   E ++R  VS  ++ GF+ N++M VH + ++SS++  TF +
Sbjct: 197 IVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDR 256

Query: 261 KVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMH 320
           KV+L  + G +E E   +   +P LIR S  KL  G EF++    + R  + ++P  L +
Sbjct: 257 KVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSY 316

Query: 321 AMQGRVLPRYRVLQVVKSKSLL----KKHPQLLDILGMSDEDFLDKFVHRFPDHVI-ELL 380
            ++ RV+PR +VLQ+++ K LL    KK   ++ I+ M++E FL+K+V RF D +  ELL
Sbjct: 317 NLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAEELL 376

Query: 381 AAFRGQCM 382
            A++  C+
Sbjct: 377 VAYKCVCL 380

[Close]
BLAST of CmoCh16G007270 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 153.7 bits (387), Expect = 2.4e-37
Identity = 99/334 (29.64%), Postives = 169/334 (50.60%), Query Frame = 1 

Query: 46  VQYLIDTFELSPARAVSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAF 105
           + YLID+  LSP  A    R    ++S E+P +V   L + GF+ A I S ++  P +  
Sbjct: 72  LNYLIDSCGLSPDSATVASRKLL-LDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLL 131

Query: 106 SNIEKTLKPKIEFFQNFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECN 165
           +N E  L PK+ FF + G+  S L R ++   T+LT SL  +L+PS   LKSV   DE  
Sbjct: 132 ANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE-- 191

Query: 166 SDLLQGMQRCCDKLMRSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREI 225
             ++  ++R     +      L+ NINY+   G+    + +LL   P    ++  + + I
Sbjct: 192 -KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAI 251

Query: 226 VSMVVETGFSTNTKMFVHGLHAISSVTN-ATFKKKVELICSFGITEKECMRMFTSAPVLI 285
                E GF+     FV  +HA+S   N + + K  E+   +G +E + M  F   P  +
Sbjct: 252 AKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCM 311

Query: 286 RTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHP 345
             S  K+ R +E+F+NE  ++   I + P  L  +++ R++PR  V +V+ S  L+K+  
Sbjct: 312 MLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDW 371

Query: 346 QLLDILGMSDEDFLDKFVHRFPDHVIELLAAFRG 379
            L  +L   ++ FL+K V ++ + + EL+  + G
Sbjct: 372 SLTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401

[Close]
BLAST of CmoCh16G007270 vs. TAIR10
Match: AT1G21150.1 (AT1G21150.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 143.7 bits (361), Expect = 2.5e-34
Identity = 94/347 (27.09%), Postives = 167/347 (48.13%), Query Frame = 1 

Query: 31  SSSSHSQASASYGIVVQYLIDTFELSPARAVSIMRSRRGIESTEKPQSVYKYLSELGFSK 90
           S +   Q        V YL+D+  LS   A S  R  + + S++KP SV     + GF+ 
Sbjct: 44  SENLEKQKPCLESFTVSYLVDSCGLSLESAKSNSRFVK-LVSSKKPDSVLALFKDHGFTN 103

Query: 91  AHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNFGLVGSDLGRFISKHSTLLTVSLEKKLMP 150
             I S I+  P++   + E  + PK+ FF + G   SD  + IS    +L+ SL K+L+P
Sbjct: 104 DQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIP 163

Query: 151 SVEILKSVFPKDECNSDLLQGMQRCCDKLMRSPYTRLLVNINYLQSCGIVGSQLSMLLKR 210
             + LKS+  ++E     L+   RC    +    +   + ++  +  G+    +  L++ 
Sbjct: 164 CYDSLKSILVEEESVVKCLKRGIRCFSLKITHCVS---LRVSICRELGVPDKSIKWLVQA 223

Query: 211 QPALFGKRESQVREIVSMVVETGFSTNTKMFVHGLHAISSVTNATFKKKVELICSFGITE 270
            P  F  RE +  E+++ V   GF      FVH + A    + +  ++K +L   FG ++
Sbjct: 224 SPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSK 283

Query: 271 KECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRV 330
           ++ +      P  +  S  K+   LE+ +N   +   DIV +P  L  +M+ R+ PR +V
Sbjct: 284 EDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQV 343

Query: 331 LQVVKSKSLLKKHP-QLLDILGMSDEDFLDKFVHRFPDHVIELLAAF 377
           + ++ SK L+KK       IL +   +F+DKFV ++ D + +L+  F
Sbjct: 344 ISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQPF 386

[Close]
BLAST of CmoCh16G007270 vs. TAIR10
Match: AT1G61970.1 (AT1G61970.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 95.9 bits (237), Expect = 5.9e-20
Identity = 76/277 (27.44%), Postives = 124/277 (44.77%), Query Frame = 1 

Query: 29  FFSSSSHSQASASYG-----IVVQYLIDTFELSPARAVSIMRSRRGIESTEKPQSVYKYL 88
           FFSS+S +  S   G       V YL+D+  L+   A SI R +   E    P SV   L
Sbjct: 33  FFSSASAACLSPRVGRKGNNFTVSYLVDSLGLTTKLAESISR-KVSFEDKNNPDSVLNLL 92

Query: 89  SELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNFGLVGSDLGRFISKHSTLLTVS 148
           +  GF+ + I + IR  PQ+  ++ EK+L PK++F Q+ G   S++   +S    +L   
Sbjct: 93  TSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKK 152

Query: 149 LEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLMRSPYTRLLVNINYLQSCGIVGSQ 208
             K +    + +K    +    ++ L      C  L +      + N++ L+  G+    
Sbjct: 153 GHKTISVYYDFIKDTLLEKSSKNEKL------CHSLPQGNLENKIRNVSVLRELGMPHKL 212

Query: 209 L-SMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKMFVHGLHAISSVTNATFKKKVEL 268
           L S+L+     + GK + +  E +  VVE GF   T  FV  L  I  +   T ++KV L
Sbjct: 213 LFSLLISDSQPVCGKEKFE--ETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHL 272

Query: 269 ICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFM 300
             S G    +    F   P+ +R S  K+   +E F+
Sbjct: 273 YKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFL 300

[Close]
BLAST of CmoCh16G007270 vs. TAIR10
Match: AT1G61960.1 (AT1G61960.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 83.6 bits (205), Expect = 3.0e-16
Identity = 73/311 (23.47%), Postives = 136/311 (43.73%), Query Frame = 1 

Query: 46  VQYLIDTFELSPARAVSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAF 105
           V YL+D+  L+   A SI + +   E    P SV   L+  GF+K+ I S I + P++  
Sbjct: 55  VSYLVDSLGLTTKLAESISK-KVSFEERRNPDSVLSLLTSYGFTKSQISSIITIYPRLLA 114

Query: 106 SNIEKTLKPKIEFFQNFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECN 165
            + EK++ PK++  Q+ G   S+L + +S    +L     K +    + +K +   D+ +
Sbjct: 115 LDAEKSIAPKLQSLQSRGASSSELTQIVSTVPKILGKRGHKSITVYYDFVKDIIEADKSS 174

Query: 166 SDLLQGMQRCCDKLMRSPYTRLLVNINYLQSCGIVGSQL-SMLLKRQPALFGKRESQVRE 225
           S      ++ C    +      + NI+ L+  G+    L  +L+     + GK   +  E
Sbjct: 175 S-----YEKLCHSFPQGNKKNKIRNISVLRELGVAQRLLFPLLISDGQPVCGK--ERFEE 234

Query: 226 IVSMVVETGFSTNTKMFVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLI 285
            +  VVE GF   T  FV  L  I  +++ T ++KV +    G    +   +F   P  +
Sbjct: 235 SLKKVVEMGFDPETTKFVEALRVIYRMSDKTIEEKVNVYKRLGFGVADVWAIFKKWPSFL 294

Query: 286 RTSVGKLKRGLEFFMNEAEVSRSDIV---RKPTCLMHAMQGRVLPRYRVLQVVKSKS--- 345
             S  K+    E   +   +    ++   + P C+  + Q  V      L +  S+    
Sbjct: 295 SYSEKKITHTFETLKSCGLLKHEVLLLLKKHPKCICSSEQKIVNSIETFLGLGFSRDEFA 354

Query: 346 -LLKKHPQLLD 349
            ++K++PQ +D
Sbjct: 355 MMVKRYPQCID 357

[Close]
BLAST of CmoCh16G007270 vs. NCBI nr
Match: gi|700198082|gb|KGN53240.1| (hypothetical protein Csa_4G036600 [Cucumis sativus])

HSP 1 Score: 493.0 bits (1268), Expect = 4.7e-136
Identity = 263/402 (65.42%), Postives = 309/402 (76.87%), Query Frame = 1 

Query: 1   MYALRSSFSIS--SRHNPSSLLR-IDPLLYCFFSSSSHSQASAS---------------- 60
           MYA+  SFS+   S  NP   LR I P L+ FFSSSS S +S+S                
Sbjct: 1   MYAMYPSFSVCVPSPLNPPFFLRLIHPFLFSFFSSSSSSSSSSSSSSSSSSSSSSSSHSQ 60

Query: 61  -----YGIVVQYLIDTFELSPARAVSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQST 120
                YGIV+QYLIDTF+LSPARAVSIM +RRGI+STEKP+SVYKYLS+LG S   I+S 
Sbjct: 61  PPSHSYGIVLQYLIDTFQLSPARAVSIMATRRGIQSTEKPRSVYKYLSDLGLSDTQIKSA 120

Query: 121 IRLAPQIAFSNIEKTLKPKIEFFQNFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILK 180
           +R+ PQIAFS+IEKTLKPKIEF QN G VGSDL +FIS+ S   + SLEK LMP+VEILK
Sbjct: 121 VRITPQIAFSSIEKTLKPKIEFLQNLGFVGSDLSKFISRQSKFFSSSLEKTLMPNVEILK 180

Query: 181 SVFPKDECNSDLLQGMQRCCDKLMRSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFG 240
           +V PK  CN DL + ++RC D L RSPY  L VNINYL+SCGIV  QLS LLKRQPALF 
Sbjct: 181 NVLPKGTCNDDLPKVLRRCSDVLTRSPYKVLSVNINYLRSCGIVDYQLSTLLKRQPALFI 240

Query: 241 KRESQVREIVSMVVETGFSTNTKMFVHGLHAISSVTNATFKKKVELICSFGITEKECMRM 300
             ES++++ VSM V+ GFS N  MF+HGLH+ISS++NAT+KKKV+LICSFGITEKECMRM
Sbjct: 241 MHESRLKDFVSMAVKAGFSPNGTMFIHGLHSISSISNATYKKKVKLICSFGITEKECMRM 300

Query: 301 FTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKS 360
           F SAPVL+RTSVGKL+ GLEFFMNEA+VS+SDIVR P CLMHAM GRVLPRYRVL+V+KS
Sbjct: 301 FNSAPVLMRTSVGKLEVGLEFFMNEAKVSKSDIVRNPFCLMHAMHGRVLPRYRVLEVLKS 360

Query: 361 KSLLKKHPQLLDILGMSDEDFLDKFVHRFPDHVIELLAAFRG 379
           K L KK P+L+D L M DEDFLDKFV RFPD++ +L  AFRG
Sbjct: 361 KRLTKKLPKLIDSLWMPDEDFLDKFVRRFPDNMNDLFEAFRG 402

[Close]
BLAST of CmoCh16G007270 vs. NCBI nr
Match: gi|659107586|ref|XP_008453750.1| (PREDICTED: uncharacterized protein LOC103494394 [Cucumis melo])

HSP 1 Score: 491.1 bits (1263), Expect = 1.8e-135
Identity = 256/404 (63.37%), Postives = 317/404 (78.47%), Query Frame = 1 

Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASY-------------GIVVQ 60
           MYA+   FS+SSR NP   LRI P  + FFSSSS S +S+S              GIV+Q
Sbjct: 1   MYAMTPPFSVSSRLNPPPFLRIHPFFFSFFSSSSSSSSSSSSSSSSHTQPPSDSNGIVLQ 60

Query: 61  YLIDTFELSPARAVSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSN 120
           YLIDTF+LSPA AVSIM +RRG++STEKP+SVYKYLSELG S   I+S IR  PQ+AF++
Sbjct: 61  YLIDTFQLSPASAVSIMANRRGLKSTEKPRSVYKYLSELGLSDTQIKSAIRNTPQLAFTS 120

Query: 121 IEKTLKPKIEFFQNFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSD 180
           I+KTLKPKIEFFQN GLVGS L +FISK+S +L+ SLEK LMP++EILK+V  KD+CN+ 
Sbjct: 121 IDKTLKPKIEFFQNLGLVGSHLSKFISKNSKVLSCSLEKTLMPNIEILKNVLAKDKCNAG 180

Query: 181 LLQGMQRCCDKLMRSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVS 240
           L   ++RC   LMRSP   L VNI+YL+SCG+V  QL MLLKRQPAL   RES++++ VS
Sbjct: 181 LPTVLRRCSGILMRSPDKVLSVNISYLRSCGVVDYQLPMLLKRQPALLITRESRLKDFVS 240

Query: 241 MVVETGFSTNTKMFVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTS 300
           M ++ GFS N++MF+HGL +ISS++NATFKKKVELICSFGITEKECMRMF SAPVL+RTS
Sbjct: 241 MAIKAGFSINSRMFIHGLLSISSISNATFKKKVELICSFGITEKECMRMFNSAPVLMRTS 300

Query: 301 VGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLL 360
           + KL+ GLEFFMNEA+VS+S+IVRKP+CLMHAM  RVLPRYRVL+V+KSK L KK P+L+
Sbjct: 301 IDKLEVGLEFFMNEAKVSKSEIVRKPSCLMHAMHERVLPRYRVLEVLKSKRLTKKLPKLI 360

Query: 361 DILGMSDEDFLDKFVHRFPDHVIELLAAFRGQCMDELQPKQLET 392
           + L  SDEDFLD +V RFPD++ +L  AFRG  +  LQP++L T
Sbjct: 361 NSLWKSDEDFLDIYVRRFPDNMDDLFEAFRGNSVGALQPEELAT 404

[Close]
BLAST of CmoCh16G007270 vs. NCBI nr
Match: gi|449462880|ref|XP_004149163.1| (PREDICTED: uncharacterized protein LOC101214031 [Cucumis sativus])

HSP 1 Score: 437.2 bits (1123), Expect = 3.0e-119
Identity = 220/315 (69.84%), Postives = 259/315 (82.22%), Query Frame = 1 

Query: 64  MRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNFG 123
           M +RRGI+STEKP+SVYKYLS+LG S   I+S +R+ PQIAFS+IEKTLKPKIEF QN G
Sbjct: 1   MATRRGIQSTEKPRSVYKYLSDLGLSDTQIKSAVRITPQIAFSSIEKTLKPKIEFLQNLG 60

Query: 124 LVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLMRSP 183
            VGSDL +FIS+ S   + SLEK LMP+VEILK+V PK  CN DL + ++RC D L RSP
Sbjct: 61  FVGSDLSKFISRQSKFFSSSLEKTLMPNVEILKNVLPKGTCNDDLPKVLRRCSDVLTRSP 120

Query: 184 YTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKMFVH 243
           Y  L VNINYL+SCGIV  QLS LLKRQPALF   ES++++ VSM V+ GFS N  MF+H
Sbjct: 121 YKVLSVNINYLRSCGIVDYQLSTLLKRQPALFIMHESRLKDFVSMAVKAGFSPNGTMFIH 180

Query: 244 GLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAE 303
           GLH+ISS++NAT+KKKV+LICSFGITEKECMRMF SAPVL+RTSVGKL+ GLEFFMNEA+
Sbjct: 181 GLHSISSISNATYKKKVKLICSFGITEKECMRMFNSAPVLMRTSVGKLEVGLEFFMNEAK 240

Query: 304 VSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDKFVH 363
           VS+SDIVR P CLMHAM GRVLPRYRVL+V+KSK L KK P+L+D L M DEDFLDKFV 
Sbjct: 241 VSKSDIVRNPFCLMHAMHGRVLPRYRVLEVLKSKRLTKKLPKLIDSLWMPDEDFLDKFVR 300

Query: 364 RFPDHVIELLAAFRG 379
           RFPD++ +L  AFRG
Sbjct: 301 RFPDNMNDLFEAFRG 315

[Close]
BLAST of CmoCh16G007270 vs. NCBI nr
Match: gi|296082490|emb|CBI21495.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 349.0 bits (894), Expect = 1.1e-92
Identity = 182/365 (49.86%), Postives = 256/365 (70.14%), Query Frame = 1 

Query: 23  DPLLYCFFSSSSHSQASASYG---IVVQYLIDTFELSPARAVSIMRSRRGIESTEKPQSV 82
           +P L+   S SS   ++ S     I+V YLI TF  S   A SI       +STE PQSV
Sbjct: 4   NPALFNLLSLSSKRLSTLSSSPNPIIVNYLIQTFGFSQTLANSISNRFWWAKSTENPQSV 63

Query: 83  YKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNFGLVGSDLGRFISKHSTL 142
             +L +LGFS+AHI++++R+ PQI FS+I+KTLKPK++FF+  GLVG+DLG+FISK+S +
Sbjct: 64  IHFLRDLGFSEAHIRTSVRVGPQILFSDIDKTLKPKVQFFEQLGLVGADLGKFISKNSKV 123

Query: 143 LTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLMRSPYTRLLVNINYLQSCGI 202
           LT+SLEKKL+P +EILK     DE N DL++ ++RC   L R+P   LL NI +L+SCGI
Sbjct: 124 LTISLEKKLVPCIEILKKTLSDDENNGDLIRVLRRCTWVLSRNPEL-LLSNIAFLESCGI 183

Query: 203 VGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKMFVHGLHAISSVTNATFKKK 262
           VGSQLSMLL RQP LF  ++S ++++VS  V+ GFS  ++M V+ L+ IS + + T +KK
Sbjct: 184 VGSQLSMLLTRQPRLFVIKQSTLKDLVSRAVDMGFSIESRMLVYALYTISCLRDETLRKK 243

Query: 263 VELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHA 322
            EL  S+G TE+EC+ MF   P L+R S  KLK G+EFFMN  +  ++ +V +PT LM +
Sbjct: 244 FELFRSWGFTEQECIEMFRRTPGLLRASEEKLKLGMEFFMNTMKFEKTLLVHRPTILMLS 303

Query: 323 MQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDKFVHRFPDHVIELLAAFRGQ 382
           M+ RV+PRYRVLQ++KSK LLK+ P  +++L ++DE+FLDKF+ RF D   ELL A++G 
Sbjct: 304 MEDRVIPRYRVLQILKSKRLLKREPSFINVLSLTDEEFLDKFISRFADDAEELLVAYKGH 363

Query: 383 CMDEL 385
            + E+
Sbjct: 364 TLQEV 367

[Close]
BLAST of CmoCh16G007270 vs. NCBI nr
Match: gi|731397370|ref|XP_002276330.2| (PREDICTED: uncharacterized protein LOC100268158 [Vitis vinifera])

HSP 1 Score: 349.0 bits (894), Expect = 1.1e-92
Identity = 182/365 (49.86%), Postives = 256/365 (70.14%), Query Frame = 1 

Query: 23  DPLLYCFFSSSSHSQASASYG---IVVQYLIDTFELSPARAVSIMRSRRGIESTEKPQSV 82
           +P L+   S SS   ++ S     I+V YLI TF  S   A SI       +STE PQSV
Sbjct: 25  NPALFNLLSLSSKRLSTLSSSPNPIIVNYLIQTFGFSQTLANSISNRFWWAKSTENPQSV 84

Query: 83  YKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNFGLVGSDLGRFISKHSTL 142
             +L +LGFS+AHI++++R+ PQI FS+I+KTLKPK++FF+  GLVG+DLG+FISK+S +
Sbjct: 85  IHFLRDLGFSEAHIRTSVRVGPQILFSDIDKTLKPKVQFFEQLGLVGADLGKFISKNSKV 144

Query: 143 LTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLMRSPYTRLLVNINYLQSCGI 202
           LT+SLEKKL+P +EILK     DE N DL++ ++RC   L R+P   LL NI +L+SCGI
Sbjct: 145 LTISLEKKLVPCIEILKKTLSDDENNGDLIRVLRRCTWVLSRNPEL-LLSNIAFLESCGI 204

Query: 203 VGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKMFVHGLHAISSVTNATFKKK 262
           VGSQLSMLL RQP LF  ++S ++++VS  V+ GFS  ++M V+ L+ IS + + T +KK
Sbjct: 205 VGSQLSMLLTRQPRLFVIKQSTLKDLVSRAVDMGFSIESRMLVYALYTISCLRDETLRKK 264

Query: 263 VELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHA 322
            EL  S+G TE+EC+ MF   P L+R S  KLK G+EFFMN  +  ++ +V +PT LM +
Sbjct: 265 FELFRSWGFTEQECIEMFRRTPGLLRASEEKLKLGMEFFMNTMKFEKTLLVHRPTILMLS 324

Query: 323 MQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDKFVHRFPDHVIELLAAFRGQ 382
           M+ RV+PRYRVLQ++KSK LLK+ P  +++L ++DE+FLDKF+ RF D   ELL A++G 
Sbjct: 325 MEDRVIPRYRVLQILKSKRLLKREPSFINVLSLTDEEFLDKFISRFADDAEELLVAYKGH 384

Query: 383 CMDEL 385
            + E+
Sbjct: 385 TLQEV 388

The following BLAST results are available for this feature:
BLAST of CmoCh16G007270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh16G007270 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUB9_CUCSA3.3e-13665.42Uncharacterized protein OS=Cucumis sativus GN=Csa_4G036600 PE=4 SV=1[more]
D7SW46_VITVI7.6e-9349.86Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01450 PE=4 SV=... [more]
B9T3X3_RICCO3.5e-9050.15Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0169990 PE=4 SV=1[more]
M5W835_PRUPE1.2e-8551.08Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015928mg PE=4 S... [more]
A0A067F1I9_CITSI3.0e-8146.05Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047553mg PE=4 SV=1[more]
BLAST of CmoCh16G007270 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G64950.11.6e-6539.95 Mitochondrial transcription termination factor family protein[more]
AT5G07900.12.4e-3729.64 Mitochondrial transcription termination factor family protein[more]
AT1G21150.12.5e-3427.09 Mitochondrial transcription termination factor family protein[more]
AT1G61970.15.9e-2027.44 Mitochondrial transcription termination factor family protein[more]
AT1G61960.13.0e-1623.47 Mitochondrial transcription termination factor family protein[more]
BLAST of CmoCh16G007270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198082|gb|KGN53240.1|4.7e-13665.42hypothetical protein Csa_4G036600 [Cucumis sativus][more]
gi|659107586|ref|XP_008453750.1|1.8e-13563.37PREDICTED: uncharacterized protein LOC103494394 [Cucumis melo][more]
gi|449462880|ref|XP_004149163.1|3.0e-11969.84PREDICTED: uncharacterized protein LOC101214031 [Cucumis sativus][more]
gi|296082490|emb|CBI21495.3|1.1e-9249.86unnamed protein product [Vitis vinifera][more]
gi|731397370|ref|XP_002276330.2|1.1e-9249.86PREDICTED: uncharacterized protein LOC100268158 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006996 organelle organization
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
molecular_function GO:0003690 double-stranded DNA binding
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G007270.1CmoCh16G007270.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 81..237
score: 1.6E-16coord: 251..358
score: 6.7
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 306..337
score: 590.0coord: 170..200
score: 1700.0coord: 94..125
score: 0.27coord: 274..305
score: 9.4coord: 205..235
score: 3.8coord: 130..162
score: 4.7coord: 239..269
score: 28
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 7..391
score: 1.4E