CmoCh16G002830 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh16G002830
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	E3 ubiquitin-protein ligase synoviolin
Location	Cmo_Chr16 : 1272373 .. 1277352 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGATTGGAAAGACCATGTCATCTGAGAATTCATCGGAAAAAGTATTGAAAGAGAAAACCTAACATCGAATTTCATATTAGTTCTTCCTCAGCTCTCCCTATTCTGCAAAATTTCTGGTTCGTCTCATCTTCATCGTCTCCGAATTGGATTAGCGTCGGGATCCAGCCGGCCATAGGTAGCCGTAGACGCCGATCAATCAGGCAAGATTTCATTTTAAAAAACAACTTCTCTGTTGATATCTTTGGATTTGCTCAGTCAATTGGTTTTGTAACATCAAGATTACGAGTTTTTGGTTTACCAAGTTTAATCTGATCATGTTGCAAAAACATTACACGGCCTGAATCAATAACGAAGAAACGTCGGGGCTAGAAAAAATTGGAGGGAAAATAAAATGCCTTGCCCGGCTGGCGCTATGGATTGATGAGATGTAATTGACGACCTGTTATCAAATCTCGGAATTAAGCATAAAATGGAAATTATTATAGCCTTTGGCATTGAAGTCCATGAGATAGAAACCAGAGAATTAACTTTCCTATATAAGATCTTCATCATTGAAAAATCCCTACTTTTCCTTCAGCCAATCCAGGAAAGCTCGGATAACTTGGAGAAGGAAAACCCTCACATTATTAAAGCTTTTTATGCATTACTTCTAAGTTTAAACGTCTTACGTACAAATAACTAATTTACTGTATTTTTAGGATGGGTACCGATGATATTTTAGCATCACATATATTGTTTCATTTGGCTGACATTTCAACTTCTCATATGGCAGTGCAGTCGAGAATGATGAAGCTGCAAACATATGCGGGGATTAGTTTCATTGCAACCATAGTGGTTATCTATCATGCCTTCAACAGTAGAGGCCAGTTCTACCCAGCACTGGTCTATTTATCGACTTCCAAGATAAATCTAGTGCTTCTTCTCAATATGGGTCTAGTCATCATGTGCATTTTGTGGCAGCTAACAAAGAAAATATTTCTCGGTTCTCTTAGAGAAGCAGAGGTTGAGAGGCTCAACGAGCAATCATGGAAGGAGTTGATGGAAATCCTCTTTGCCATAACTATTTTCCGCCAAGATTTTTCTGTTTCATTCCTTGGTATGGTTACGGCTCTGTTGTTGATCAAAGCTTTGCATTGGTTGGCTCAGAAGAGGGTTGAATACATGGAAACCACTCCATCGGTGCCGTTGTTGTCTCATATCCGGATAGTTTCCTTCTTAGGCTTCCTCTTTGTTCTAGATAGTCTGTTTTTTTATAATTCGATAGAATCTCTGATACAGACAAGGAAGGCCTCGGTTTCCCTCTTCTTTTCATTTGAGTAAGATTTCAAATATCCTATGATGTTTTCTTATGACCCTTAGAAGCTCTTATATCATCATAAAATAAAGTCAATGACTTGTTTTTCAGGTATATGATTCTTGCAACAACGGCTGTGTCAACGTTTGTAAAATATATTTTCTATGTCAGTGATGTACTCATGGAGGGACAATGGGAAAGGAAGCCCGTCTATACATTTTACTTGGAACTTATCCGAGACTTACTTCACTTGTCAATGTACCTGTGTTTCTTTCTTGTGATTTTCATGTAAGTACTCTAGCTACACCTGTTAAGCTATCTCATTCTTCTGAACTGGAAGTTCAGAATTAATTTCTTCTGCATATATGTGCTCATATTGCGTATGCCCAAATGTTAAAGTAGTAAAACACTGGCTCTTCTAAAGAAATACTATGCAAACCAATAAAAAACGAATGTGGTTACTGGGATTTGTGTCCTTACATGTATCAATGGCTGTCGTATTTTGCTCTCATGTTAATTGTGGGAGAAGCCTCATAAATCATAACATTAGTGTCTTATGACTGACATGGTCTTTGTTGTTTGTTTGGATATCCTTTTCATTTACTTCCAATCAGTCGTTGTTCTTAATTTCTTTCCTCTTTTAAGATTGAAAGCGGCAGTTGTTGTTCTAAATAAGTCAATTACTATCCCAAAGGTTGATGGTTCGATCCTCAACCTAAAAAGTTGAAGTTACATCCATATCAACTTCATCCCCATTTCACATCTTGATTTTGCTGACTTTGACTTTGCTCTTGCAGGACCTATGGTGTGCCTTTGCACTTGATCCGAGAGCTCTATGAGATCTTTAGGAATTTTAGGATTCGTATTGCAGATTACATCCGTTATAGAAAGATTACTTCAAACATGAATGATCGCTTTCCTGATGCAACGCCTGAAGAACTCAATTCGTGCGTGCATGCTTGGTCAACTTGTTGTTTCTTTTATGCTTCCAGTACTTTTATATTGGCTACTAAAAATCCTTCTATGGAATTGTAGAAGTGACGCAACATGCATTATCTGTCGTGAAGAGATGACAGTTGCAAAGAAACTAGTATGTGGACATCTTTTTCATGTCCATTGCCTCCGATCCTGGTTGGAGCGACAACATACTTGCCCAACCTGCAGAGCCCTTGTTGTACCACCTGAAGGTTTAAGCACAGCAGCCGGTCATCATGGACCACAATCTGATGCTAACCAACAAGGTAATTGCACCAATAAGAATTCAATTCATTTCAATTTACTGCCTGGCTAAAGGATCCTACATCTTGTACAATTTTGATAAGTTTATAAATTTCTTCCATGTATATTTCATCTGATTGTGAACATTATTGGAATCTTTCATTTGAGGAAACTGAAACTTCGACTAAGGAAAAGCATGAATGATCCAGAAGGCCTAAGCTAAAAGAGTACTCTTTGATGTTGTTTATGTTTCATTCGGAAACCTAAAGATAGGAAATATGAATCTTCTCAATGTTCTAGGGACAGGAAAATATCTTTTCCACCTGCCTTGTCTCCCACAAAGTAGTCCGTGCAATGCTTTTTTAGTATCTTGTTTGTGCAATGCTTCCCCTGCATCTCTGATTCTTTTTTGCAAGTGGTGCTTTGTATCTGGCATCTAGTAACCCAATTTGGTTTAAAGTTTCAAAACTATTAAATAATCTAGACCATTAATAACCATGCAAAAATAAGCTATCAGTATTTGCAAGTCTTCTCCATATATATACCTCCCTATCAGTGTGAAAGAGTTGAAATTTGGGTCTCTCTCACAATTCGTTTCATGGTTGTTGGCTTTCTCTCTACTCTCTTCTCTGTTATTATTTCTTTTGTATTCATGATTGTTTTTCTTATGAGACTCTCCTTAAAGTTGTTTATTTTATATATTTTTTTATCCTACAACTCAATCTCTTCCAAAGGAAATAGTTTGAAGAACCGGCTATGAACTTCAGCATATCTCTTTGAGAAGGATGATTATTCTTGAACTGGGCCTCTGGTCCTCCGTAAAAATTGGGCGCTTCATTTTTTTCTTGTTTTGTTTTTAACTTTCTTGTTGTGTTAGAAAAGGTGTAGGGGTAATTTAGAAAAGGTGTAGAAGTAATTTCCAAGTTTACATGATCTAATTGCTTTGGATTAAAATGTTTTGTTGTTTGGTGCATTCGTATAGCATTCCCTTCAGTGTATCTGCTTTCTTTAATAGAAGTTTTTTTACTCAAATCATTGAACTGATGGTTTTACTTGATTATTTTTCGATATGGGGTTATACCATGCTGGAACTTGGATACAATGCAATGACTGATCTTTCTGTTGAAAACAGGAACAGGAACCACAAGTTCATCCGCGCAAGGTACGAGTGATACAGGTGTTGCTAATGATAATTTGAGCCATCATCAGGCTAGAGTCCGAGCTGCTGCGGCTGCAGCTTCTGTATATGAGAAATCATATGTTTATCCTTGTGCGAGCACATTAGTATGGTATGCGTTTTTATTGCAAACATCCCACACACGCACCCACCAAAAGGAGAGGAGTATGACAAATTTTTTTAATTATCTTATTTATTTACAGGTCTCCTGGATATGCAGTAGTTCCTCAGGTTGAAAGACCTTTGCCTGACTCCAATAACATAGAACCAAATGGACATCCACAACAATTTTCTTTTACCGGCGGCCCTTCCAACCTGTTCTTCACTCAATTTCCCCAGAATCTTTTTGTTCCTTTTCAGCCACGAGAGGGTACTGGAAACAGTACGGACGGATTGGGCAGTAGTCAAAATGTATCAGGCTTACATCTTGAAGCTCAACAAAGATTTCTCCAGCAACAGATTGAGGTATGTTGTTTAATTGTTGCATCAACATTATCTAGTTGGCTCTCATTCTTCTTGATGGAGCCTTTTTCTCTAGTTGGGCTCCCTTTTGTGGTCTTGTTTTTTTGGGTTGCCTTGTATTCTTTCATTTTTTTTTTCTCATTAAAAAATATCATTACCCAATGAACTCTCTTGTTTGGTCAGTGTATGTTTCGTTTGTGCTCTTGTTGCTGGGCCTCTGTACATTCTTTAGCTTAGTTTACTAGTATGCACATGGCCGTGGGTAAATATTGAATTGAGGTCATGACATGTGCTTAGGCACTTGATTCTTAGCGTTGTTTGGTTTTCCCCTTTGTGCTGTTTCCTTGACCTCTGATGTTCAATAACGAGAAGCTAACTTTTTTGCTTTTTATATTCGTGGCTTACCGTTGGGGTGTTTAAAAATGAGCTACCATAAACAGTTGAAAAGAAAAAAAAAAAAAAATTGTGATACTTAGGAGATGTCCTGTTAATATATAAATTTGTATTTATTAGGTAAACCATATGAAATTTATTCGTTCTCTTTTCTTTTCTTTTCTTTCACTGTAAATACGGCTCTTCGTTCAATTCTTTCGAAGTTATTGACAACTTCATTCAAACTAGTCTGAGTATAACAGGGTTGGGTGAGGTTGAGGATTTCTAAATTCAAAATTTCATGTTTTCCAACAGATCCTACAGAATCAGCTGCAACATCTCCGTAAACCAGAAGTTGAGGAAAGCTCAGGAGCAGGTGAGGCAGATAAGAAAGGGAAAAGTGTAGCATTCTCGTCACCGTCGCCATCGCCGTCGTCATCTGATTCTCGATGA

mRNA sequence

ATGTTGATTGGAAAGACCATGTCATCTGAGAATTCATCGGAAAAAGTAGCCGTAGACGCCGATCAATCAGTGCAGTCGAGAATGATGAAGCTGCAAACATATGCGGGGATTAGTTTCATTGCAACCATAGTGGTTATCTATCATGCCTTCAACAGTAGAGGCCAGTTCTACCCAGCACTGGTCTATTTATCGACTTCCAAGATAAATCTAGTGCTTCTTCTCAATATGGGTCTAGTCATCATGTGCATTTTGTGGCAGCTAACAAAGAAAATATTTCTCGGTTCTCTTAGAGAAGCAGAGGTTGAGAGGCTCAACGAGCAATCATGGAAGGAGTTGATGGAAATCCTCTTTGCCATAACTATTTTCCGCCAAGATTTTTCTGTTTCATTCCTTGGTATGGTTACGGCTCTGTTGTTGATCAAAGCTTTGCATTGGTTGGCTCAGAAGAGGGTTGAATACATGGAAACCACTCCATCGGTGCCGTTGTTGTCTCATATCCGGATAGTTTCCTTCTTAGGCTTCCTCTTTGTTCTAGATAGTCTGTTTTTTTATAATTCGATAGAATCTCTGATACAGACAAGGAAGGCCTCGGTTTCCCTCTTCTTTTCATTTGAGTATATGATTCTTGCAACAACGGCTGTGTCAACGTTTGTAAAATATATTTTCTATGTCAGTGATGTACTCATGGAGGGACAATGGGAAAGGAAGCCCGTCTATACATTTTACTTGGAACTTATCCGAGACTTACTTCACTTGTCAATGTACCTGTGTTTCTTTCTTGTGATTTTCATGACCTATGGTGTGCCTTTGCACTTGATCCGAGAGCTCTATGAGATCTTTAGGAATTTTAGGATTCGTATTGCAGATTACATCCGTTATAGAAAGATTACTTCAAACATGAATGATCGCTTTCCTGATGCAACGCCTGAAGAACTCAATTCAAGTGACGCAACATGCATTATCTGTCGTGAAGAGATGACAGTTGCAAAGAAACTAGTATGTGGACATCTTTTTCATGTCCATTGCCTCCGATCCTGGTTGGAGCGACAACATACTTGCCCAACCTGCAGAGCCCTTGTTGTACCACCTGAAGGTTTAAGCACAGCAGCCGGTCATCATGGACCACAATCTGATGCTAACCAACAAGGAACAGGAACCACAAGTTCATCCGCGCAAGGTACGAGTGATACAGGTGTTGCTAATGATAATTTGAGCCATCATCAGGCTAGAGTCCGAGCTGCTGCGGCTGCAGCTTCTGTATATGAGAAATCATATGTTTATCCTTGTGCGAGCACATTAGTATGGTCTCCTGGATATGCAGTAGTTCCTCAGGTTGAAAGACCTTTGCCTGACTCCAATAACATAGAACCAAATGGACATCCACAACAATTTTCTTTTACCGGCGGCCCTTCCAACCTGTTCTTCACTCAATTTCCCCAGAATCTTTTTGTTCCTTTTCAGCCACGAGAGGGTACTGGAAACAGTACGGACGGATTGGGCAGTAGTCAAAATGTATCAGGCTTACATCTTGAAGCTCAACAAAGATTTCTCCAGCAACAGATTGAGATCCTACAGAATCAGCTGCAACATCTCCGTAAACCAGAAGTTGAGGAAAGCTCAGGAGCAGGTGAGGCAGATAAGAAAGGGAAAAGTGTAGCATTCTCGTCACCGTCGCCATCGCCGTCGTCATCTGATTCTCGATGA

Coding sequence (CDS)

ATGTTGATTGGAAAGACCATGTCATCTGAGAATTCATCGGAAAAAGTAGCCGTAGACGCCGATCAATCAGTGCAGTCGAGAATGATGAAGCTGCAAACATATGCGGGGATTAGTTTCATTGCAACCATAGTGGTTATCTATCATGCCTTCAACAGTAGAGGCCAGTTCTACCCAGCACTGGTCTATTTATCGACTTCCAAGATAAATCTAGTGCTTCTTCTCAATATGGGTCTAGTCATCATGTGCATTTTGTGGCAGCTAACAAAGAAAATATTTCTCGGTTCTCTTAGAGAAGCAGAGGTTGAGAGGCTCAACGAGCAATCATGGAAGGAGTTGATGGAAATCCTCTTTGCCATAACTATTTTCCGCCAAGATTTTTCTGTTTCATTCCTTGGTATGGTTACGGCTCTGTTGTTGATCAAAGCTTTGCATTGGTTGGCTCAGAAGAGGGTTGAATACATGGAAACCACTCCATCGGTGCCGTTGTTGTCTCATATCCGGATAGTTTCCTTCTTAGGCTTCCTCTTTGTTCTAGATAGTCTGTTTTTTTATAATTCGATAGAATCTCTGATACAGACAAGGAAGGCCTCGGTTTCCCTCTTCTTTTCATTTGAGTATATGATTCTTGCAACAACGGCTGTGTCAACGTTTGTAAAATATATTTTCTATGTCAGTGATGTACTCATGGAGGGACAATGGGAAAGGAAGCCCGTCTATACATTTTACTTGGAACTTATCCGAGACTTACTTCACTTGTCAATGTACCTGTGTTTCTTTCTTGTGATTTTCATGACCTATGGTGTGCCTTTGCACTTGATCCGAGAGCTCTATGAGATCTTTAGGAATTTTAGGATTCGTATTGCAGATTACATCCGTTATAGAAAGATTACTTCAAACATGAATGATCGCTTTCCTGATGCAACGCCTGAAGAACTCAATTCAAGTGACGCAACATGCATTATCTGTCGTGAAGAGATGACAGTTGCAAAGAAACTAGTATGTGGACATCTTTTTCATGTCCATTGCCTCCGATCCTGGTTGGAGCGACAACATACTTGCCCAACCTGCAGAGCCCTTGTTGTACCACCTGAAGGTTTAAGCACAGCAGCCGGTCATCATGGACCACAATCTGATGCTAACCAACAAGGAACAGGAACCACAAGTTCATCCGCGCAAGGTACGAGTGATACAGGTGTTGCTAATGATAATTTGAGCCATCATCAGGCTAGAGTCCGAGCTGCTGCGGCTGCAGCTTCTGTATATGAGAAATCATATGTTTATCCTTGTGCGAGCACATTAGTATGGTCTCCTGGATATGCAGTAGTTCCTCAGGTTGAAAGACCTTTGCCTGACTCCAATAACATAGAACCAAATGGACATCCACAACAATTTTCTTTTACCGGCGGCCCTTCCAACCTGTTCTTCACTCAATTTCCCCAGAATCTTTTTGTTCCTTTTCAGCCACGAGAGGGTACTGGAAACAGTACGGACGGATTGGGCAGTAGTCAAAATGTATCAGGCTTACATCTTGAAGCTCAACAAAGATTTCTCCAGCAACAGATTGAGATCCTACAGAATCAGCTGCAACATCTCCGTAAACCAGAAGTTGAGGAAAGCTCAGGAGCAGGTGAGGCAGATAAGAAAGGGAAAAGTGTAGCATTCTCGTCACCGTCGCCATCGCCGTCGTCATCTGATTCTCGATGA

Homology

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BLAST of CmoCh16G002830 vs. Swiss-Prot
Match: HRD1B_ARATH (ERAD-associated E3 ubiquitin-protein ligase HRD1B OS=Arabidopsis thaliana GN=HRD1B PE=2 SV=1)

HSP 1 Score: 614.8 bits (1584), Expect = 9.7e-175
Identity = 314/421 (74.58%), Postives = 369/421 (87.65%), Query Frame = 1


Query: 28  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 87
           M++L+ YAG+S +AT+VVIYHAF+SRGQFYPA VYLSTSKINLV+LLNMGLV+M  LW L
Sbjct: 1   MIQLKVYAGLSTLATLVVIYHAFSSRGQFYPATVYLSTSKINLVVLLNMGLVLMLSLWNL 60

Query: 88  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 147
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFSV F+ +V  LLLIK LHW+A
Sbjct: 61  VKIVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSVGFISLVVTLLLIKGLHWMA 120

Query: 148 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 207
           QKRVEY+ETTPSV LLSH+RIVSF+ FL +LD L  Y+SI+ LIQ+RKAS+S+FF+FEYM
Sbjct: 121 QKRVEYIETTPSVTLLSHVRIVSFMVFLLILDCLLTYSSIQQLIQSRKASMSVFFTFEYM 180

Query: 208 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 267
           ILATT VS  VKY FYV+D+L EGQWE KPVYTFYLEL+RDLLHLSMYLCFFL+IFM YG
Sbjct: 181 ILATTTVSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNYG 240

Query: 268 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 327
           +PLHLIRELYE FRNF+IR+ DY+RYRKITSNMNDRFPDATPEEL+S+DATCIICREEMT
Sbjct: 241 LPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEMT 300

Query: 328 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GLSTAAGHHGPQSDANQQGTGT 387
            AKKLVCGHLFHVHCLRSWLERQ+TCPTCRALVVP E   STA+G+ GP  ++ QQGTGT
Sbjct: 301 SAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQQGTGT 360

Query: 388 TSSSAQGTSDTGVANDNLSHHQARVRAAAAAASVYEKSYVYP-CASTLVWSPGYAVVPQV 447
           +SS  QG+S +  A++N+S H+AR +AAA+AAS+Y +S VYP  A+TLVWS G +++PQ 
Sbjct: 361 SSSDGQGSSVSAAASENMSRHEARFQAAASAASIYGRSIVYPSSANTLVWSQGNSLLPQT 420

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BLAST of CmoCh16G002830 vs. Swiss-Prot
Match: HRD1A_ARATH (ERAD-associated E3 ubiquitin-protein ligase HRD1A OS=Arabidopsis thaliana GN=HRD1A PE=2 SV=1)

HSP 1 Score: 601.7 bits (1550), Expect = 8.5e-171
Identity = 338/533 (63.41%), Postives = 396/533 (74.30%), Query Frame = 1


Query: 28  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 87
           M++L+TYAG+SF+AT+ VIYHAF+SRGQFYPA VYLSTSKI+LVLLLNM LV+M  LW L
Sbjct: 1   MIRLRTYAGLSFMATLAVIYHAFSSRGQFYPATVYLSTSKISLVLLLNMCLVLMLSLWHL 60

Query: 88  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 147
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFS  FL +V  LLLIKALHWLA
Sbjct: 61  VKFVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSSGFLPLVVTLLLIKALHWLA 120

Query: 148 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 207
           QKRVEY+ETTPSV  LSH RIVSF+GFL ++DSLF Y+SI  LIQ+R+ASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPSVSKLSHFRIVSFMGFLLLVDSLFMYSSIRHLIQSRQASVSLFFSFEYM 180

Query: 208 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 267
           ILATT V+ FVKY+FYV+D+LM+GQWE+KPVYTFYLELIRDLLHLSMY+CFF VIFM YG
Sbjct: 181 ILATTTVAIFVKYVFYVTDMLMDGQWEKKPVYTFYLELIRDLLHLSMYICFFFVIFMNYG 240

Query: 268 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 327
           VPLHL+RELYE FRNF+IR++DY+RYRKITSNMNDRFPDATPEEL +SDATCIICREEMT
Sbjct: 241 VPLHLLRELYETFRNFQIRVSDYLRYRKITSNMNDRFPDATPEELTASDATCIICREEMT 300

Query: 328 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGLSTAAGHHGPQSDANQQGTGTT 387
            AKKL+CGHLFHVHCLRSWLERQ TCPTCRALVVPPE  ++AA         +QQ  GT+
Sbjct: 301 NAKKLICGHLFHVHCLRSWLERQQTCPTCRALVVPPENATSAAPGQRELHQGSQQ--GTS 360

Query: 388 SSSAQG---TSDTGVANDNLSHHQARVRAAAAAASVYEKSYVYPCASTLVWSPGYAVVPQ 447
           SS  QG   +S  GV+N++LS H AR++AAA+AASVY KS VYP A+T+ WS G     Q
Sbjct: 361 SSGNQGSEISSSAGVSNNSLSRHHARLQAAASAASVYGKSMVYPSANTVAWSSGVPGTEQ 420

Query: 448 V----ERPLPDSNNIEPNGHPQQFSFTGGPSNLFFTQFPQNLFVPFQPREGTGNSTDGLG 507
           V    ++ LP  N    N H          +N+  T+  +                    
Sbjct: 421 VSTEPDQTLPQHNLPVENSHAY--------ANMSETKLEE-------------------- 480

Query: 508 SSQNVSGLHLEAQQRFLQQQIEILQNQLQHLRKPEVEESSGAGEADKKGKSVA 554
                    LE     L+ ++  L+      RKPE      AGE + KGKSVA
Sbjct: 481 -----MRKSLETHLEILRNRLHFLET-----RKPES-----AGEPENKGKSVA 488

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BLAST of CmoCh16G002830 vs. Swiss-Prot
Match: HRD1_ORYSJ (ERAD-associated E3 ubiquitin-protein ligase HRD1 OS=Oryza sativa subsp. japonica GN=HRD1 PE=2 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 3.3e-159
Identity = 306/503 (60.83%), Postives = 370/503 (73.56%), Query Frame = 1


Query: 28  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 87
           M++LQTYA  S +AT   +Y+AF+SR QFYPA+VYLSTSKI  VLLLN GLV MC+ WQL
Sbjct: 1   MIRLQTYAAFSLMATATAVYYAFSSREQFYPAMVYLSTSKICFVLLLNTGLVAMCVAWQL 60

Query: 88  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 147
            K++FLG+LREAEVERLNEQ+W+E++EILFA+TIFRQDFSVSFL MV ALLL+KALHWLA
Sbjct: 61  VKRLFLGTLREAEVERLNEQAWREVVEILFAVTIFRQDFSVSFLAMVAALLLVKALHWLA 120

Query: 148 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 207
           QKRVEY+ETTPSVP+LSH RIVSF+ FL V+D LF  NS+ SLI  R+ASV++FFSFEYM
Sbjct: 121 QKRVEYIETTPSVPMLSHARIVSFMLFLLVVDCLFLSNSLRSLIHKREASVAIFFSFEYM 180

Query: 208 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 267
           ILAT+ VSTFVKYIFYVSD+LMEGQWE+K VYTFYLELI DL+HLS+Y+ FF+ IF+ YG
Sbjct: 181 ILATSTVSTFVKYIFYVSDMLMEGQWEKKAVYTFYLELISDLVHLSLYMLFFIAIFLNYG 240

Query: 268 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 327
           VPLHLIRELYE FRNFRIRIADY+RYRKITSNMN+RFPDAT +ELN+SDATCIICREEMT
Sbjct: 241 VPLHLIRELYETFRNFRIRIADYVRYRKITSNMNERFPDATADELNASDATCIICREEMT 300

Query: 328 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGLSTAAGHHGPQSDANQ-QGTGT 387
            AKKL+CGHLFHVHCLRSWLERQHTCPTCRA ++PP+   TAA  HG         G GT
Sbjct: 301 TAKKLLCGHLFHVHCLRSWLERQHTCPTCRAPILPPDNGRTAARPHGVHPGVQPVPGNGT 360

Query: 388 TSSSAQGTSDTGVANDNLSHHQARVRAAAAAASVYEKSYVYPCASTLVWSPGYAVVPQVE 447
             S          A +N+S  QA++ AAA+AAS+Y +S+ YP A+ L     Y+  PQ  
Sbjct: 361 PGSER-------AAGENISRRQAKLEAAASAASLYGRSFAYPPANNL---NRYSTPPQST 420

Query: 448 RPLPDSNNIEPNGHPQQFSFTGGPSNLFFTQFPQNLFVPFQPREGTGNSTDGLGSSQNVS 507
              P S     +    +   T  PS                P      +   + +++ + 
Sbjct: 421 SNGPQSGEASTSNQSPKGHATADPS---------------APTFYARGAVSSVTTTRELE 478

Query: 508 GLHLEAQQRFLQQQIEILQNQLQ 530
               +A +  ++ QIE+LQ QLQ
Sbjct: 481 SSLQKAYENAIKSQIEMLQIQLQ 478

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BLAST of CmoCh16G002830 vs. Swiss-Prot
Match: SYVN1_DANRE (E3 ubiquitin-protein ligase synoviolin OS=Danio rerio GN=syvn1 PE=2 SV=2)

HSP 1 Score: 264.6 bits (675), Expect = 2.5e-69
Identity = 141/331 (42.60%), Postives = 201/331 (60.73%), Query Frame = 1


Query: 28  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 87
           M++       S   T  V+ HA+  + QFYP +VYL+ S  ++ +L     V++ +L +L
Sbjct: 1   MVRAALVTATSLALTGAVVAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKL 60

Query: 88  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 147
            +K+F G LR AE+E L E+SW  + E   A T+FR DFS  F+ + T LL +K  HWLA
Sbjct: 61  MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA 120

Query: 148 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 207
           + RV++ME +P++  + H R++S +  L V+D LF  ++  S+I TR ASV L F FEY 
Sbjct: 121 EDRVDFMERSPNISWVFHFRVLSLMVLLGVMDFLFVNHACHSII-TRGASVQLVFGFEYA 180

Query: 208 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 267
           IL T  ++TF+KY  +  D+  E  W+ K VY  Y EL    + + +Y+ F  ++   + 
Sbjct: 181 ILMTMVLTTFIKYTLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHT 240

Query: 268 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEM- 327
            PL  IR +Y   R F+  + D I  R+   NMN  +PDATPE+L ++D  CIICREEM 
Sbjct: 241 FPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQATDNVCIICREEMV 300

Query: 328 TVAKKLVCGHLFHVHCLRSWLERQHTCPTCR 358
           T AKKL C H+FH  CLRSW +RQ TCPTCR
Sbjct: 301 TGAKKLPCNHIFHSSCLRSWFQRQQTCPTCR 330

[Close]

BLAST of CmoCh16G002830 vs. Swiss-Prot
Match: SYVN1_HUMAN (E3 ubiquitin-protein ligase synoviolin OS=Homo sapiens GN=SYVN1 PE=1 SV=2)

HSP 1 Score: 262.3 bits (669), Expect = 1.2e-68
Identity = 141/331 (42.60%), Postives = 198/331 (59.82%), Query Frame = 1


Query: 28  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 87
           M +       S   T  V+ HA+  + QFYP +VYL+ S  ++ +L     V++ +L ++
Sbjct: 1   MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV 60

Query: 88  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 147
             K+F G LR AE+E L E+SW  + E   A T+FR DFS  F+ + T LL +K  HWLA
Sbjct: 61  MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA 120

Query: 148 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 207
           + RV++ME +P++  L H RIVS +  L +LD LF  ++  S++ TR ASV L F FEY 
Sbjct: 121 EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSIL-TRGASVQLVFGFEYA 180

Query: 208 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 267
           IL T  ++ F+KY+ +  D+  E  W+ K VY  Y EL    + + +Y+ F  ++   + 
Sbjct: 181 ILMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHT 240

Query: 268 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEM- 327
            PL  IR +Y   R F+  + D I  R+   NMN  +PDATPEEL + D  CIICREEM 
Sbjct: 241 FPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMV 300

Query: 328 TVAKKLVCGHLFHVHCLRSWLERQHTCPTCR 358
           T AK+L C H+FH  CLRSW +RQ TCPTCR
Sbjct: 301 TGAKRLPCNHIFHTSCLRSWFQRQQTCPTCR 330

[Close]

BLAST of CmoCh16G002830 vs. TrEMBL
Match: A0A0A0LJG4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G013330 PE=4 SV=1)

HSP 1 Score: 944.5 bits (2440), Expect = 5.9e-272
Identity = 504/547 (92.14%), Postives = 515/547 (94.15%), Query Frame = 1


Query: 28  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 87
           MMKLQTYAGISFIATI+VIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIMVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 88  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 147
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSV+FLGMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120

Query: 148 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 207
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSI+SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIDSLIQTRKASVSLFFSFEYM 180

Query: 208 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 267
           ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 268 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 327
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 328 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGLSTAAGHHGPQSDANQQGTGTT 387
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEG ST  GHHG QSDANQQGTGTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTTGHHGVQSDANQQGTGTT 360

Query: 388 SSSAQGTSDTGVANDNLSHHQARVRAAAAAASVYEKSYVYPCASTLVWSPGYAVVPQVER 447
           SSSAQGTS TGV NDNLSHHQARVRAAAAAAS+YEKSYVYPCASTLVWS GYAVVPQVER
Sbjct: 361 SSSAQGTSGTGVTNDNLSHHQARVRAAAAAASIYEKSYVYPCASTLVWSLGYAVVPQVER 420

Query: 448 PLPDSNNIE------PNGHPQQFSFTGGPSNLFFTQFPQNLFVPFQPREGTGNSTDGLGS 507
           PL DSNN E      PNGHPQ FSF GGPSNL FTQFPQN+FVPFQPREGTGN+ + LGS
Sbjct: 421 PLFDSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPREGTGNNIEELGS 480

Query: 508 SQNVSGLHLEAQQRFLQQQIEILQNQLQHLRKPEVEESS-GAGEADKKGKSVAFS-SPSP 567
           S NVSG  LEAQ++FLQQQIE LQNQLQ LRKP+VEESS GA EADKKGKS+A S S S 
Sbjct: 481 SLNVSGSQLEAQEKFLQQQIEFLQNQLQLLRKPKVEESSRGASEADKKGKSLAISPSSSA 540

[Close]

BLAST of CmoCh16G002830 vs. TrEMBL
Match: B9S201_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_1324630 PE=4 SV=1)

HSP 1 Score: 760.0 bits (1961), Expect = 2.1e-216
Identity = 406/544 (74.63%), Postives = 460/544 (84.56%), Query Frame = 1


Query: 28  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 87
           MM+++TYA +S IATI VIYHAFNSRGQFYPA+VYLSTSKINLVLLLNMGLVIMCILWQL
Sbjct: 1   MMRMRTYASLSLIATIAVIYHAFNSRGQFYPAMVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 88  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 147
           TK++FLGSLREAEVERLNEQSW+E+MEILFAITIFRQDFSV+FL MVTALLLIKALHWLA
Sbjct: 61  TKRVFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLA 120

Query: 148 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 207
           QKRVEY+ETTP+VP+LSHIRIVSFLGFL +LDSLF Y+SI+ L++TR+ASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPTVPMLSHIRIVSFLGFLLLLDSLFLYSSIKFLLETRQASVSLFFSFEYM 180

Query: 208 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 267
           ILATT VSTFVKY+FYVSD+LMEGQWERK VYTFYLELIRDLLHLSMYLCFFLVIFM YG
Sbjct: 181 ILATTTVSTFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYG 240

Query: 268 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 327
           VPLHLIRELYE FRNF+IR+ADYIRYRKITSNMNDRFPDATPEELN+SDATCIICREEMT
Sbjct: 241 VPLHLIRELYETFRNFKIRVADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMT 300

Query: 328 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPP--EGLSTAAGHHGPQSDANQQGTG 387
            AKKL+CGHLFHVHCLRSWLERQHTCPTCRALVVPP    ++TA G HG QS+A++QGTG
Sbjct: 301 TAKKLLCGHLFHVHCLRSWLERQHTCPTCRALVVPPTQHDINTAGGQHGSQSEAHRQGTG 360

Query: 388 TTSSSAQGTSDTGVANDNLSHHQARVRAAAAAASVYEKSYVYPCASTLVWSPGYAVVPQV 447
             +   QG S  G+A+DNLS HQAR++AAAAAAS+YEKS+VYP A+TLVWSPGYA++PQ 
Sbjct: 361 AANPGTQG-SIGGIADDNLSRHQARIQAAAAAASLYEKSFVYPSANTLVWSPGYALLPQA 420

Query: 448 ERPLPDSNNIEPNGHPQQF--------SFTGGPSNLFFTQFPQNLFVPFQPREGTGNSTD 507
           +RPL D     P G  Q F        +F  GPSNL   QFPQ +FVPFQ    +G   +
Sbjct: 421 QRPLAD-----PTGGEQAFVGQSQPQPAFHAGPSNLTLPQFPQCVFVPFQVPNDSGAQGE 480

Query: 508 GLGSSQNVSGLHLEAQQRFLQQQIEILQNQLQHLRKPEVEES---SGAGEADKKGKSVAF 559
            LG   N+    LEAQ++FLQ QIE+LQ QLQ L +P+ E+S     A  +D KGK+VA 
Sbjct: 481 RLG---NMPNCELEAQKKFLQYQIEVLQRQLQLLHQPKAEDSIHTDPATSSDSKGKAVAS 535

[Close]

BLAST of CmoCh16G002830 vs. TrEMBL
Match: M5X723_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003806mg PE=4 SV=1)

HSP 1 Score: 757.7 bits (1955), Expect = 1.0e-215
Identity = 404/539 (74.95%), Postives = 459/539 (85.16%), Query Frame = 1


Query: 28  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 87
           MM+LQTYAGIS +AT+ +IYHAF+SRGQFYPA+VYLSTSKI+LVLLLNMGLVIMC +WQL
Sbjct: 1   MMRLQTYAGISLVATLAIIYHAFSSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCTMWQL 60

Query: 88  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 147
           TKK+FLGSLREAEVERLNEQSW+E+MEILFAITIFRQDFSVSFL MVTALLLIKALHWLA
Sbjct: 61  TKKLFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVSFLAMVTALLLIKALHWLA 120

Query: 148 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 207
           QKRVEY+ETTPSVP+LSH+RIVSFLGFL V+DSLF Y+SI +LI+T+KASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPSVPMLSHVRIVSFLGFLLVVDSLFLYSSISNLIKTQKASVSLFFSFEYM 180

Query: 208 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 267
           ILATT VSTFVKY+FYVSD+LMEGQWE+KPVYTFY+ELIRDLLHLSMYLCFFLVIFM YG
Sbjct: 181 ILATTTVSTFVKYVFYVSDMLMEGQWEKKPVYTFYVELIRDLLHLSMYLCFFLVIFMYYG 240

Query: 268 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 327
           VPLHLIRELYE FRNF+IR+ DYIRYRK+TSNMNDRFPDATPEELN+SDATCIICREEMT
Sbjct: 241 VPLHLIRELYETFRNFKIRLGDYIRYRKLTSNMNDRFPDATPEELNASDATCIICREEMT 300

Query: 328 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GLSTAAGHHGPQSDANQQGTGT 387
            AKKL+CGHLFHV CLRSWLERQHTCPTCRALV PPE G  TA GH G +SDA+QQGTGT
Sbjct: 301 TAKKLLCGHLFHVPCLRSWLERQHTCPTCRALVEPPENGAGTAGGHRGSRSDAHQQGTGT 360

Query: 388 TSSSAQGTSDTGVANDNLSHHQARVRAAAAAASVYEKSYVYPCASTLVWSPGYAVVPQVE 447
           T+    G    GVA DNLS H+AR+RAAAAAAS+YEKS+VYP A+ LVWSPGY  +PQV+
Sbjct: 361 TAQG--GGVAGGVAGDNLSQHEARLRAAAAAASIYEKSHVYPSANRLVWSPGYVALPQVQ 420

Query: 448 RPLPDSNNIEPNG--HPQQFSFTGGPSNLFFTQFPQNLFVPFQPREGTGNSTDGLGSSQN 507
           R + DS N E +G  HP Q +  GGPSNL   QFP  +FVPF+  +      + LG   N
Sbjct: 421 RQMADSANTESSGVLHP-QLATPGGPSNLSSPQFPHYMFVPFEVPDVA--YEERLGGDPN 480

Query: 508 VSGLHLEAQQRFLQQQIEILQNQLQHLRKPEVEESSGAGEA---DKKGKSVAFSSPSPS 561
           ++   LEAQ++FLQ QIEILQNQL+ L+KP+ +ES   G +   D KGK+V  SS S S
Sbjct: 481 ITASQLEAQKKFLQHQIEILQNQLKTLQKPKPKESMDTGPSASLDGKGKNVESSSSSVS 534

[Close]

BLAST of CmoCh16G002830 vs. TrEMBL
Match: A0A061GUW0_THECC (RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_041140 PE=4 SV=1)

HSP 1 Score: 756.5 bits (1952), Expect = 2.3e-215
Identity = 402/540 (74.44%), Postives = 461/540 (85.37%), Query Frame = 1


Query: 28  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 87
           MM+L+TYAG+S +AT+ VIYHAFNSRGQFYPA+VYLSTSKI+LVLLLNMGLVIMC LWQL
Sbjct: 1   MMRLRTYAGLSLVATLAVIYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCTLWQL 60

Query: 88  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 147
           TK++FLGSLREAE+ERLNEQSW+E+MEILFAITIFRQDFSV+FL MVTALLLIKALHWLA
Sbjct: 61  TKRVFLGSLREAEIERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLA 120

Query: 148 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 207
           QKRVEY+ETTPSV +LSH+RIVSF+GFL +LD LF Y+SI+ LIQTR+ASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPSVSMLSHVRIVSFMGFLLLLDCLFLYSSIKFLIQTRQASVSLFFSFEYM 180

Query: 208 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 267
           ILATT VSTFVKY+FYVSD+LMEGQWE+K VYTFYLELIRDLLHLSMYLCFFLVIFM YG
Sbjct: 181 ILATTTVSTFVKYVFYVSDMLMEGQWEKKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYG 240

Query: 268 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 327
           VPLHLIRELYE FRNF+IR+ADY+RYRKITSNMNDRFPDATPEELN+SDATCIICREEMT
Sbjct: 241 VPLHLIRELYETFRNFKIRVADYMRYRKITSNMNDRFPDATPEELNASDATCIICREEMT 300

Query: 328 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GLSTAAGHHGPQSDANQQGTGT 387
            AKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE G S+A G HGP+SDA+QQG+ +
Sbjct: 301 TAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTSSAGGQHGPRSDAHQQGS-S 360

Query: 388 TSSSAQGTSDTGVANDNLSHHQARVRAAAAAASVYEKSYVYPCASTLVWSPGYAVVPQVE 447
           TSS+ QG     +A DNL+ HQAR++AAAAAAS+YEKSY+YP A+TLVWSPGYAV+PQ  
Sbjct: 361 TSSATQGPGG-DMATDNLTQHQARLQAAAAAASIYEKSYIYPSANTLVWSPGYAVLPQAY 420

Query: 448 RPLPDSNNIEPNGH-----PQQFSFTGGPSNLFFTQFPQNLFVPFQPREGTGNSTDGLGS 507
            P  DS  +E +G       QQF+  GG +NL F QFP  +FVPF+     GNS +G GS
Sbjct: 421 GPSADSTKVESSGERTFIGQQQFAIPGGHANLSFPQFPHCVFVPFELPGANGNSGEGSGS 480

Query: 508 SQNVSGLHLEAQQRFLQQQIEILQNQLQHLRKPEVEESSG---AGEADKKGKSVAFSSPS 559
            QN+    LEA Q+ +QQ+IE   +QLQ L+KP+ EES      G +D+KGK+ A SS S
Sbjct: 481 YQNIPDSQLEA-QKIIQQKIE---HQLQLLQKPKTEESMDIGLTGSSDRKGKATASSSVS 534

[Close]

BLAST of CmoCh16G002830 vs. TrEMBL
Match: A0A0D2NQS0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G119000 PE=4 SV=1)

HSP 1 Score: 746.9 bits (1927), Expect = 1.8e-212
Identity = 397/542 (73.25%), Postives = 459/542 (84.69%), Query Frame = 1


Query: 28  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 87
           MM+L+TYAG+S + T+ VIYHAFNSRGQFYPA+VYLSTSKI+LVLLLNMGLV+MCILWQL
Sbjct: 1   MMRLRTYAGLSLVTTLAVIYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVVMCILWQL 60

Query: 88  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 147
           TK++FLGSLREAEVERLNEQSW+E+MEILFAITIFRQ+FSV FL MVTALLLIKALHWLA
Sbjct: 61  TKRLFLGSLREAEVERLNEQSWREVMEILFAITIFRQEFSVPFLAMVTALLLIKALHWLA 120

Query: 148 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 207
           QKRVEY+ETTPSVP L+H+RI+SFLGFL +LDSLF Y+SI+ LIQTR+ASVS+FF+FEYM
Sbjct: 121 QKRVEYIETTPSVPKLAHVRIISFLGFLLLLDSLFLYSSIKFLIQTRQASVSIFFAFEYM 180

Query: 208 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 267
           ILATT VSTFVKY+FYVSD+LMEGQWE+K VYTFYLELIRDLLHLSMYLCFFLVIFM YG
Sbjct: 181 ILATTTVSTFVKYVFYVSDMLMEGQWEKKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYG 240

Query: 268 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 327
           VPLHLIRELYE FRNF+IR+ADY+RYRKITSNMNDRFPDATPEEL++SDATCIICREEMT
Sbjct: 241 VPLHLIRELYETFRNFKIRVADYLRYRKITSNMNDRFPDATPEELSASDATCIICREEMT 300

Query: 328 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GLSTAAGHHGPQSDANQQ-GTG 387
           +AKKL+CGHLFHVHCLRSWLERQHTCPTCRALVVPPE G S++ G HG  SDA +Q GTG
Sbjct: 301 LAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGASSSGGQHGTWSDAPRQVGTG 360

Query: 388 TTSSSAQGTSDTGVANDNLSHHQARVRAAAAAASVYEKSYVYPCASTLVWSPGYAVVPQV 447
           +++SSA       +A DNL+ HQAR++AAAAAAS+YEKSYVYP A+TLVWSPG  V+P  
Sbjct: 361 SSTSSATQGPGVEMATDNLTPHQARLQAAAAAASIYEKSYVYPSANTLVWSPGNPVLPGS 420

Query: 448 ERPLPDSNNIEPNGHP-----QQFSFTGGPSNLFFTQFPQNLFVPFQPREGTGNS-TDGL 507
             PL D+  +E +G       QQF+  GG SNL F QFP  +FVPFQ     GNS   G 
Sbjct: 421 YAPLADTMKVEHSGESPSIGHQQFAIPGGQSNLPFPQFPNCVFVPFQLPGANGNSGGGGS 480

Query: 508 GSSQNVSGLHLEAQQRFLQQQIEILQNQLQ--HLRKPEVEESSGAG---EADKKGKSVAF 557
           GS+QN+S   LEAQ++ ++QQIE+LQ QLQ   + +P+ EESS  G    +D KGK VA 
Sbjct: 481 GSNQNISDSQLEAQKKIIEQQIEVLQRQLQLLQMHEPKTEESSDIGLTTSSDSKGKGVAS 540

[Close]

BLAST of CmoCh16G002830 vs. TAIR10
Match: AT1G65040.2 (AT1G65040.2 RING/U-box superfamily protein)

HSP 1 Score: 614.8 bits (1584), Expect = 5.5e-176
Identity = 314/421 (74.58%), Postives = 369/421 (87.65%), Query Frame = 1


Query: 28  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 87
           M++L+ YAG+S +AT+VVIYHAF+SRGQFYPA VYLSTSKINLV+LLNMGLV+M  LW L
Sbjct: 1   MIQLKVYAGLSTLATLVVIYHAFSSRGQFYPATVYLSTSKINLVVLLNMGLVLMLSLWNL 60

Query: 88  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 147
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFSV F+ +V  LLLIK LHW+A
Sbjct: 61  VKIVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSVGFISLVVTLLLIKGLHWMA 120

Query: 148 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 207
           QKRVEY+ETTPSV LLSH+RIVSF+ FL +LD L  Y+SI+ LIQ+RKAS+S+FF+FEYM
Sbjct: 121 QKRVEYIETTPSVTLLSHVRIVSFMVFLLILDCLLTYSSIQQLIQSRKASMSVFFTFEYM 180

Query: 208 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 267
           ILATT VS  VKY FYV+D+L EGQWE KPVYTFYLEL+RDLLHLSMYLCFFL+IFM YG
Sbjct: 181 ILATTTVSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNYG 240

Query: 268 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 327
           +PLHLIRELYE FRNF+IR+ DY+RYRKITSNMNDRFPDATPEEL+S+DATCIICREEMT
Sbjct: 241 LPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEMT 300

Query: 328 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GLSTAAGHHGPQSDANQQGTGT 387
            AKKLVCGHLFHVHCLRSWLERQ+TCPTCRALVVP E   STA+G+ GP  ++ QQGTGT
Sbjct: 301 SAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQQGTGT 360

Query: 388 TSSSAQGTSDTGVANDNLSHHQARVRAAAAAASVYEKSYVYP-CASTLVWSPGYAVVPQV 447
           +SS  QG+S +  A++N+S H+AR +AAA+AAS+Y +S VYP  A+TLVWS G +++PQ 
Sbjct: 361 SSSDGQGSSVSAAASENMSRHEARFQAAASAASIYGRSIVYPSSANTLVWSQGNSLLPQT 420

[Close]

BLAST of CmoCh16G002830 vs. TAIR10
Match: AT3G16090.1 (AT3G16090.1 RING/U-box superfamily protein)

HSP 1 Score: 601.7 bits (1550), Expect = 4.8e-172
Identity = 338/533 (63.41%), Postives = 396/533 (74.30%), Query Frame = 1


Query: 28  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 87
           M++L+TYAG+SF+AT+ VIYHAF+SRGQFYPA VYLSTSKI+LVLLLNM LV+M  LW L
Sbjct: 1   MIRLRTYAGLSFMATLAVIYHAFSSRGQFYPATVYLSTSKISLVLLLNMCLVLMLSLWHL 60

Query: 88  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 147
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFS  FL +V  LLLIKALHWLA
Sbjct: 61  VKFVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSSGFLPLVVTLLLIKALHWLA 120

Query: 148 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 207
           QKRVEY+ETTPSV  LSH RIVSF+GFL ++DSLF Y+SI  LIQ+R+ASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPSVSKLSHFRIVSFMGFLLLVDSLFMYSSIRHLIQSRQASVSLFFSFEYM 180

Query: 208 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 267
           ILATT V+ FVKY+FYV+D+LM+GQWE+KPVYTFYLELIRDLLHLSMY+CFF VIFM YG
Sbjct: 181 ILATTTVAIFVKYVFYVTDMLMDGQWEKKPVYTFYLELIRDLLHLSMYICFFFVIFMNYG 240

Query: 268 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 327
           VPLHL+RELYE FRNF+IR++DY+RYRKITSNMNDRFPDATPEEL +SDATCIICREEMT
Sbjct: 241 VPLHLLRELYETFRNFQIRVSDYLRYRKITSNMNDRFPDATPEELTASDATCIICREEMT 300

Query: 328 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGLSTAAGHHGPQSDANQQGTGTT 387
            AKKL+CGHLFHVHCLRSWLERQ TCPTCRALVVPPE  ++AA         +QQ  GT+
Sbjct: 301 NAKKLICGHLFHVHCLRSWLERQQTCPTCRALVVPPENATSAAPGQRELHQGSQQ--GTS 360

Query: 388 SSSAQG---TSDTGVANDNLSHHQARVRAAAAAASVYEKSYVYPCASTLVWSPGYAVVPQ 447
           SS  QG   +S  GV+N++LS H AR++AAA+AASVY KS VYP A+T+ WS G     Q
Sbjct: 361 SSGNQGSEISSSAGVSNNSLSRHHARLQAAASAASVYGKSMVYPSANTVAWSSGVPGTEQ 420

Query: 448 V----ERPLPDSNNIEPNGHPQQFSFTGGPSNLFFTQFPQNLFVPFQPREGTGNSTDGLG 507
           V    ++ LP  N    N H          +N+  T+  +                    
Sbjct: 421 VSTEPDQTLPQHNLPVENSHAY--------ANMSETKLEE-------------------- 480

Query: 508 SSQNVSGLHLEAQQRFLQQQIEILQNQLQHLRKPEVEESSGAGEADKKGKSVA 554
                    LE     L+ ++  L+      RKPE      AGE + KGKSVA
Sbjct: 481 -----MRKSLETHLEILRNRLHFLET-----RKPES-----AGEPENKGKSVA 488

[Close]

BLAST of CmoCh16G002830 vs. TAIR10
Match: AT4G25230.1 (AT4G25230.1 RPM1 interacting protein 2)

HSP 1 Score: 94.7 bits (234), Expect = 1.9e-19
Identity = 97/343 (28.28%), Postives = 153/343 (44.61%), Query Frame = 1


Query: 52  SRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQLTKKIFLGSLREAEVERLNEQSWKE 111
           S G    AL  L  S   + LL N  L +  +L    K +F G L + E ++L E+    
Sbjct: 42  SLGDSEHALELLLGSYFTIALLTNFVLNVYILLVLSLKTLFFGDLYDVETKKLVERLANY 101

Query: 112 L------MEILFAITIFRQDFSVSFLGMVTALLLIKALHWLAQKRVEYMETTPSVPLLSH 171
           +      + ++   TIF+    V +   +T L  +K    LA+ R+E +  +PS    ++
Sbjct: 102 IIYKGTFLPLVIPPTIFQ---GVLWTVWLTVLCTLKMFQALARDRLERLNASPSSTPWTY 161

Query: 172 IRIVSFLGFLFVLD------SLFFYNSIESLIQTRKASVSLFFSFE----YMILATTAVS 231
            R+ S L  +  +D      SL  YN+I S +           +FE     +I     + 
Sbjct: 162 FRVYSVLFLVLSVDMFWIKLSLMTYNTIGSAVYLLLLFEPCSIAFETLQALLIHGFQLLD 221

Query: 232 TFVKYIF----------YVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMT 291
            ++ ++           ++  +      E K +    L    D+  L M L  +L I+  
Sbjct: 222 MWINHLAVKNSDCQRSKFIDSMTAGSLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWL 281

Query: 292 YGVPLHLIRELYEIFRNFRI-------RIADYIRYRKITSNMNDRFPDATPEELNSSDAT 351
           +G+  HL+  +  +F N R        RI  YI+ R     ++   PDAT EEL + D  
Sbjct: 282 HGIAFHLVDAV--LFLNIRALLSAILKRIKGYIKLRIALGALHAALPDATSEELRAYDDE 341

Query: 352 CIICREEMTVAKKLVCGHLFHVHCLRSWLER----QHTCPTCR 358
           C ICRE M  AK+L C HLFH+ CLRSWL++     ++CPTCR
Sbjct: 342 CAICREPMAKAKRLHCNHLFHLGCLRSWLDQGLNEVYSCPTCR 379

[Close]

BLAST of CmoCh16G002830 vs. TAIR10
Match: AT5G51450.2 (AT5G51450.2 RPM1 interacting protein 3)

HSP 1 Score: 82.8 bits (203), Expect = 7.5e-16
Identity = 97/350 (27.71%), Postives = 148/350 (42.29%), Query Frame = 1


Query: 52  SRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQLTKKIFLGSLREAEVERLNEQSWKE 111
           S G     L  L +S   + LL +  L I  +L    K +F G L   E  +L E+    
Sbjct: 42  SLGNSENTLELLLSSHTTIALLASFVLNIYILLVLSLKTLFFGDLYAIETRKLVERLANY 101

Query: 112 L------MEILFAITIFRQDFSVSFLGMVTALLLIKALHWLAQKRVEYMETTPSVPLLSH 171
           +      +  +   T+F+    V +   +T L  +K    LA+ R++ +  +PS    ++
Sbjct: 102 IIYKGTFLPFVVPRTVFQ---GVLWTIWLTVLCTLKMFQALARDRLDRLNASPSSTPWTY 161

Query: 172 IRIVSFLGFLFVLD------SLFFYNSIESLIQTRKASVSLFFSFEYMILATTAVSTFVK 231
            R+ S L  +   D      SL  YN++ S       SV L   FE   +A   +   + 
Sbjct: 162 FRVYSALFMVLSTDLCWIKLSLMIYNTVGS-------SVYLLLLFEPCGIAFETLQALLI 221

Query: 232 YIFYVSDVLME---------------------GQWERKPVYTFYLELIRDLLHLSMYLCF 291
           + F + D+ +                         E K +    L    D+  L M L  
Sbjct: 222 HGFQLLDMWINHLAVKNSDCQRSKFYDSMTAGSLLEWKGLLNRNLGFFLDMATLVMALGH 281

Query: 292 FLVIFMTYGVPLHLIRELYEIFRNFRI-------RIADYIRYRKITSNMNDRFPDATPEE 351
           +L I+  +G+  HL+  +  +F N R        RI  YI+ R     ++    DAT EE
Sbjct: 282 YLHIWWLHGMAFHLVDAV--LFLNIRALLSSILKRIKGYIKLRVALGALHAALLDATSEE 341

Query: 352 LNSSDATCIICREEMTVAKKLVCGHLFHVHCLRSWLER----QHTCPTCR 358
           L   D  C ICRE M  AK+L C HLFH+ CLRSWL++     ++CPTCR
Sbjct: 342 LRDYDDECAICREPMAKAKRLHCNHLFHLGCLRSWLDQGLNEVYSCPTCR 379

[Close]

BLAST of CmoCh16G002830 vs. TAIR10
Match: AT2G44581.1 (AT2G44581.1 RING/U-box superfamily protein)

HSP 1 Score: 60.1 bits (144), Expect = 5.2e-09
Identity = 31/75 (41.33%), Postives = 40/75 (53.33%), Query Frame = 1


Query: 292 RYRKITSNMNDRFPDATPEELNSSDATCIICREEMTVAKKL----VCGHLFHVHCLRSWL 351
           RYR  T +   R+   T EE +SS   C IC E  T  +K+     C H FHV C+  WL
Sbjct: 44  RYRTFTVHHRRRWRKTTAEEKHSSPY-CTICLENATEGEKMRRIAACSHCFHVDCIDPWL 103

Query: 352 ERQHTCPTCRALVVP 363
           E++  CP CRA + P
Sbjct: 104 EKKSMCPLCRAEIPP 117

[Close]

BLAST of CmoCh16G002830 vs. NCBI nr
Match: gi|449442867|ref|XP_004139202.1| (PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B [Cucumis sativus])

HSP 1 Score: 944.5 bits (2440), Expect = 8.5e-272
Identity = 504/547 (92.14%), Postives = 515/547 (94.15%), Query Frame = 1


Query: 28  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 87
           MMKLQTYAGISFIATI+VIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIMVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 88  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 147
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSV+FLGMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120

Query: 148 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 207
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSI+SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIDSLIQTRKASVSLFFSFEYM 180

Query: 208 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 267
           ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 268 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 327
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 328 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGLSTAAGHHGPQSDANQQGTGTT 387
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEG ST  GHHG QSDANQQGTGTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTTGHHGVQSDANQQGTGTT 360

Query: 388 SSSAQGTSDTGVANDNLSHHQARVRAAAAAASVYEKSYVYPCASTLVWSPGYAVVPQVER 447
           SSSAQGTS TGV NDNLSHHQARVRAAAAAAS+YEKSYVYPCASTLVWS GYAVVPQVER
Sbjct: 361 SSSAQGTSGTGVTNDNLSHHQARVRAAAAAASIYEKSYVYPCASTLVWSLGYAVVPQVER 420

Query: 448 PLPDSNNIE------PNGHPQQFSFTGGPSNLFFTQFPQNLFVPFQPREGTGNSTDGLGS 507
           PL DSNN E      PNGHPQ FSF GGPSNL FTQFPQN+FVPFQPREGTGN+ + LGS
Sbjct: 421 PLFDSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPREGTGNNIEELGS 480

Query: 508 SQNVSGLHLEAQQRFLQQQIEILQNQLQHLRKPEVEESS-GAGEADKKGKSVAFS-SPSP 567
           S NVSG  LEAQ++FLQQQIE LQNQLQ LRKP+VEESS GA EADKKGKS+A S S S 
Sbjct: 481 SLNVSGSQLEAQEKFLQQQIEFLQNQLQLLRKPKVEESSRGASEADKKGKSLAISPSSSA 540

[Close]

BLAST of CmoCh16G002830 vs. NCBI nr
Match: gi|659070498|ref|XP_008455400.1| (PREDICTED: E3 ubiquitin-protein ligase synoviolin-like [Cucumis melo])

HSP 1 Score: 943.3 bits (2437), Expect = 1.9e-271
Identity = 503/547 (91.96%), Postives = 515/547 (94.15%), Query Frame = 1


Query: 28  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 87
           MMKLQTYAGISFIATI+VIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIMVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 88  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 147
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSV+FLGMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120

Query: 148 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 207
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSI+SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIDSLIQTRKASVSLFFSFEYM 180

Query: 208 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 267
           ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 268 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 327
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 328 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGLSTAAGHHGPQSDANQQGTGTT 387
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEG ST +GHHG QSDANQQGTGTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTSGHHGVQSDANQQGTGTT 360

Query: 388 SSSAQGTSDTGVANDNLSHHQARVRAAAAAASVYEKSYVYPCASTLVWSPGYAVVPQVER 447
           SSSAQGTS TGV N NLSHHQARVRAAAAAAS+YEKSYVYPCASTLVWS GYAVVPQVER
Sbjct: 361 SSSAQGTSGTGVTNANLSHHQARVRAAAAAASIYEKSYVYPCASTLVWSLGYAVVPQVER 420

Query: 448 PLPDSNNIE------PNGHPQQFSFTGGPSNLFFTQFPQNLFVPFQPREGTGNSTDGLGS 507
           PL DSNN E      PNGHPQ FSF GGPSNL FTQFPQN+FVPFQPREGTGN+ + LGS
Sbjct: 421 PLFDSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPREGTGNNIEELGS 480

Query: 508 SQNVSGLHLEAQQRFLQQQIEILQNQLQHLRKPEVEESS-GAGEADKKGKSVAFS-SPSP 567
           S NVSG  LEAQ++FLQQQIE LQNQLQ LRKP+VEESS GA E DKKGKS+A S SPS 
Sbjct: 481 SLNVSGSQLEAQEKFLQQQIEFLQNQLQLLRKPKVEESSRGASETDKKGKSLAISPSPSA 540

[Close]

BLAST of CmoCh16G002830 vs. NCBI nr
Match: gi|645257794|ref|XP_008234576.1| (PREDICTED: E3 ubiquitin-protein ligase synoviolin-like [Prunus mume])

HSP 1 Score: 760.0 bits (1961), Expect = 3.0e-216
Identity = 405/538 (75.28%), Postives = 459/538 (85.32%), Query Frame = 1


Query: 28  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 87
           MM+LQTYAGIS +AT+ +IYHAF+SRGQFYPA+V+LSTSKI+LVLLLNMGLVIMC +WQL
Sbjct: 1   MMRLQTYAGISLVATLAIIYHAFSSRGQFYPAMVFLSTSKISLVLLLNMGLVIMCTMWQL 60

Query: 88  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 147
           TKK+FLGSLREAEVERLNEQSW+E+MEILFAITIFRQDFSVSFL MVTALLLIKALHWLA
Sbjct: 61  TKKLFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVSFLAMVTALLLIKALHWLA 120

Query: 148 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 207
           QKRVEY+ETTPSVP+LSH+RIVSFLGFL V+DSLF Y+SI +LI+T+KASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPSVPMLSHVRIVSFLGFLLVVDSLFLYSSISNLIKTQKASVSLFFSFEYM 180

Query: 208 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 267
           ILATT VSTFVKY+FYVSD+LMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFM YG
Sbjct: 181 ILATTTVSTFVKYVFYVSDMLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMYYG 240

Query: 268 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 327
           VPLHLIRELYE FRNF+IR+ADY+RYRK+TSNMNDRFPDATPEELN+SDATCIICREEMT
Sbjct: 241 VPLHLIRELYETFRNFKIRVADYVRYRKLTSNMNDRFPDATPEELNASDATCIICREEMT 300

Query: 328 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GLSTAAGHHGPQSDANQQGTGT 387
            AKKL+CGHLFHV CLRSWLERQHTCPTCRALVVPPE G  TA GH G +SDA+QQGTGT
Sbjct: 301 TAKKLLCGHLFHVPCLRSWLERQHTCPTCRALVVPPENGAGTAGGHRGSRSDAHQQGTGT 360

Query: 388 TSSSAQGTSDTGVANDNLSHHQARVRAAAAAASVYEKSYVYPCASTLVWSPGYAVVPQVE 447
           T   AQG    GVA DNLS H+AR+RAAAAAAS+YEKS+VYP A+ LVWSPGY  +PQV+
Sbjct: 361 T---AQG---GGVAGDNLSQHEARLRAAAAAASIYEKSHVYPSANRLVWSPGYVALPQVQ 420

Query: 448 RPLPDSNNIEPNG-HPQQFSFTGGPSNLFFTQFPQNLFVPFQPREGTGNSTDGLGSSQNV 507
           R + D+ N E +G    Q +  GGPSNL   QFP  +FVPF+  +      + LG   N+
Sbjct: 421 RQMADAANTESSGVSHSQLATPGGPSNLSSPQFPHYMFVPFEVPDVA--YEERLGGDPNI 480

Query: 508 SGLHLEAQQRFLQQQIEILQNQLQHLRKPEVEESSGAGEA---DKKGKSVAFSSPSPS 561
           +   LEAQ++FLQ QIEILQNQ Q L+KP+ +ES   G +   D KGK+V  SS S S
Sbjct: 481 TASQLEAQKKFLQHQIEILQNQFQTLQKPKPKESMDTGPSASLDGKGKNVESSSSSVS 530

[Close]

BLAST of CmoCh16G002830 vs. NCBI nr
Match: gi|255557983|ref|XP_002520020.1| (PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B [Ricinus communis])

HSP 1 Score: 760.0 bits (1961), Expect = 3.0e-216
Identity = 406/544 (74.63%), Postives = 460/544 (84.56%), Query Frame = 1


Query: 28  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 87
           MM+++TYA +S IATI VIYHAFNSRGQFYPA+VYLSTSKINLVLLLNMGLVIMCILWQL
Sbjct: 1   MMRMRTYASLSLIATIAVIYHAFNSRGQFYPAMVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 88  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 147
           TK++FLGSLREAEVERLNEQSW+E+MEILFAITIFRQDFSV+FL MVTALLLIKALHWLA
Sbjct: 61  TKRVFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLA 120

Query: 148 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 207
           QKRVEY+ETTP+VP+LSHIRIVSFLGFL +LDSLF Y+SI+ L++TR+ASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPTVPMLSHIRIVSFLGFLLLLDSLFLYSSIKFLLETRQASVSLFFSFEYM 180

Query: 208 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 267
           ILATT VSTFVKY+FYVSD+LMEGQWERK VYTFYLELIRDLLHLSMYLCFFLVIFM YG
Sbjct: 181 ILATTTVSTFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYG 240

Query: 268 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 327
           VPLHLIRELYE FRNF+IR+ADYIRYRKITSNMNDRFPDATPEELN+SDATCIICREEMT
Sbjct: 241 VPLHLIRELYETFRNFKIRVADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMT 300

Query: 328 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPP--EGLSTAAGHHGPQSDANQQGTG 387
            AKKL+CGHLFHVHCLRSWLERQHTCPTCRALVVPP    ++TA G HG QS+A++QGTG
Sbjct: 301 TAKKLLCGHLFHVHCLRSWLERQHTCPTCRALVVPPTQHDINTAGGQHGSQSEAHRQGTG 360

Query: 388 TTSSSAQGTSDTGVANDNLSHHQARVRAAAAAASVYEKSYVYPCASTLVWSPGYAVVPQV 447
             +   QG S  G+A+DNLS HQAR++AAAAAAS+YEKS+VYP A+TLVWSPGYA++PQ 
Sbjct: 361 AANPGTQG-SIGGIADDNLSRHQARIQAAAAAASLYEKSFVYPSANTLVWSPGYALLPQA 420

Query: 448 ERPLPDSNNIEPNGHPQQF--------SFTGGPSNLFFTQFPQNLFVPFQPREGTGNSTD 507
           +RPL D     P G  Q F        +F  GPSNL   QFPQ +FVPFQ    +G   +
Sbjct: 421 QRPLAD-----PTGGEQAFVGQSQPQPAFHAGPSNLTLPQFPQCVFVPFQVPNDSGAQGE 480

Query: 508 GLGSSQNVSGLHLEAQQRFLQQQIEILQNQLQHLRKPEVEES---SGAGEADKKGKSVAF 559
            LG   N+    LEAQ++FLQ QIE+LQ QLQ L +P+ E+S     A  +D KGK+VA 
Sbjct: 481 RLG---NMPNCELEAQKKFLQYQIEVLQRQLQLLHQPKAEDSIHTDPATSSDSKGKAVAS 535

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BLAST of CmoCh16G002830 vs. NCBI nr
Match: gi|596051917|ref|XP_007220658.1| (hypothetical protein PRUPE_ppa003806mg [Prunus persica])

HSP 1 Score: 757.7 bits (1955), Expect = 1.5e-215
Identity = 404/539 (74.95%), Postives = 459/539 (85.16%), Query Frame = 1


Query: 28  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 87
           MM+LQTYAGIS +AT+ +IYHAF+SRGQFYPA+VYLSTSKI+LVLLLNMGLVIMC +WQL
Sbjct: 1   MMRLQTYAGISLVATLAIIYHAFSSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCTMWQL 60

Query: 88  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 147
           TKK+FLGSLREAEVERLNEQSW+E+MEILFAITIFRQDFSVSFL MVTALLLIKALHWLA
Sbjct: 61  TKKLFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVSFLAMVTALLLIKALHWLA 120

Query: 148 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 207
           QKRVEY+ETTPSVP+LSH+RIVSFLGFL V+DSLF Y+SI +LI+T+KASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPSVPMLSHVRIVSFLGFLLVVDSLFLYSSISNLIKTQKASVSLFFSFEYM 180

Query: 208 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 267
           ILATT VSTFVKY+FYVSD+LMEGQWE+KPVYTFY+ELIRDLLHLSMYLCFFLVIFM YG
Sbjct: 181 ILATTTVSTFVKYVFYVSDMLMEGQWEKKPVYTFYVELIRDLLHLSMYLCFFLVIFMYYG 240

Query: 268 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 327
           VPLHLIRELYE FRNF+IR+ DYIRYRK+TSNMNDRFPDATPEELN+SDATCIICREEMT
Sbjct: 241 VPLHLIRELYETFRNFKIRLGDYIRYRKLTSNMNDRFPDATPEELNASDATCIICREEMT 300

Query: 328 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GLSTAAGHHGPQSDANQQGTGT 387
            AKKL+CGHLFHV CLRSWLERQHTCPTCRALV PPE G  TA GH G +SDA+QQGTGT
Sbjct: 301 TAKKLLCGHLFHVPCLRSWLERQHTCPTCRALVEPPENGAGTAGGHRGSRSDAHQQGTGT 360

Query: 388 TSSSAQGTSDTGVANDNLSHHQARVRAAAAAASVYEKSYVYPCASTLVWSPGYAVVPQVE 447
           T+    G    GVA DNLS H+AR+RAAAAAAS+YEKS+VYP A+ LVWSPGY  +PQV+
Sbjct: 361 TAQG--GGVAGGVAGDNLSQHEARLRAAAAAASIYEKSHVYPSANRLVWSPGYVALPQVQ 420

Query: 448 RPLPDSNNIEPNG--HPQQFSFTGGPSNLFFTQFPQNLFVPFQPREGTGNSTDGLGSSQN 507
           R + DS N E +G  HP Q +  GGPSNL   QFP  +FVPF+  +      + LG   N
Sbjct: 421 RQMADSANTESSGVLHP-QLATPGGPSNLSSPQFPHYMFVPFEVPDVA--YEERLGGDPN 480

Query: 508 VSGLHLEAQQRFLQQQIEILQNQLQHLRKPEVEESSGAGEA---DKKGKSVAFSSPSPS 561
           ++   LEAQ++FLQ QIEILQNQL+ L+KP+ +ES   G +   D KGK+V  SS S S
Sbjct: 481 ITASQLEAQKKFLQHQIEILQNQLKTLQKPKPKESMDTGPSASLDGKGKNVESSSSSVS 534

The following BLAST results are available for this feature:

BLAST of CmoCh16G002830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HRD1B_ARATH	9.7e-175	74.58	ERAD-associated E3 ubiquitin-protein ligase HRD1B OS=Arabidopsis thaliana GN=HRD...	[more]
HRD1A_ARATH	8.5e-171	63.41	ERAD-associated E3 ubiquitin-protein ligase HRD1A OS=Arabidopsis thaliana GN=HRD...	[more]
HRD1_ORYSJ	3.3e-159	60.83	ERAD-associated E3 ubiquitin-protein ligase HRD1 OS=Oryza sativa subsp. japonica...	[more]
SYVN1_DANRE	2.5e-69	42.60	E3 ubiquitin-protein ligase synoviolin OS=Danio rerio GN=syvn1 PE=2 SV=2	[more]
SYVN1_HUMAN	1.2e-68	42.60	E3 ubiquitin-protein ligase synoviolin OS=Homo sapiens GN=SYVN1 PE=1 SV=2	[more]

BLAST of CmoCh16G002830 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJG4_CUCSA	5.9e-272	92.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G013330 PE=4 SV=1	[more]
B9S201_RICCO	2.1e-216	74.63	Protein binding protein, putative OS=Ricinus communis GN=RCOM_1324630 PE=4 SV=1	[more]
M5X723_PRUPE	1.0e-215	74.95	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003806mg PE=4 SV=1	[more]
A0A061GUW0_THECC	2.3e-215	74.44	RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_041140 PE=4 SV=1	[more]
A0A0D2NQS0_GOSRA	1.8e-212	73.25	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G119000 PE=4 SV=1	[more]

BLAST of CmoCh16G002830 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G65040.2	5.5e-176	74.58	RING/U-box superfamily protein	[more]
AT3G16090.1	4.8e-172	63.41	RING/U-box superfamily protein	[more]
AT4G25230.1	1.9e-19	28.28	RPM1 interacting protein 2	[more]
AT5G51450.2	7.5e-16	27.71	RPM1 interacting protein 3	[more]
AT2G44581.1	5.2e-09	41.33	RING/U-box superfamily protein	[more]

BLAST of CmoCh16G002830 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442867\|ref\|XP_004139202.1\|	8.5e-272	92.14	PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B [Cucumis sativus]	[more]
gi\|659070498\|ref\|XP_008455400.1\|	1.9e-271	91.96	PREDICTED: E3 ubiquitin-protein ligase synoviolin-like [Cucumis melo]	[more]
gi\|645257794\|ref\|XP_008234576.1\|	3.0e-216	75.28	PREDICTED: E3 ubiquitin-protein ligase synoviolin-like [Prunus mume]	[more]
gi\|255557983\|ref\|XP_002520020.1\|	3.0e-216	74.63	PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B [Ricinus communis]	[more]
gi\|596051917\|ref\|XP_007220658.1\|	1.5e-215	74.95	hypothetical protein PRUPE_ppa003806mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Cellular Component**
Term	Definition
GO:0000836	Hrd1p ubiquitin ligase complex

Vocabulary: **Biological Process**
Term	Definition
GO:0016567	protein ubiquitination
GO:0030433	ER-associated ubiquitin-dependent protein catabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0061630	ubiquitin protein ligase activity
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030433	ER-associated ubiquitin-dependent protein catabolic process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0008150	biological_process
cellular_component	GO:0000836	Hrd1p ubiquitin ligase complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G002830.1	CmoCh16G002830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 318..357 score: 7.5
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 319..356 score: 2.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 319..357 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 307..360 score: 2.8
None	No IPR available	PANTHER	PTHR22763	RING ZINC FINGER PROTEIN	coord: 28..403 score: 8.1E-166coord: 517..566 score: 8.1E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 299..363 score: 9.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh16G002830	CmaCh16G002450	Cucurbita maxima (Rimu)	cmacmoB325
CmoCh16G002830	Cla001113	Watermelon (97103) v1	cmowmB292
CmoCh16G002830	ClCG10G009140	Watermelon (Charleston Gray)	cmowcgB279
CmoCh16G002830	Lsi03G009370	Bottle gourd (USVL1VR-Ls)	cmolsiB295
CmoCh16G002830	Cp4.1LG01g03290	Cucurbita pepo (Zucchini)	cmocpeB318
CmoCh16G002830	Cp4.1LG14g05000	Cucurbita pepo (Zucchini)	cmocpeB307
CmoCh16G002830	Cla97C10G192310	Watermelon (97103) v2	cmowmbB323
CmoCh16G002830	Carg19739	Silver-seed gourd	carcmoB0402
CmoCh16G002830	Carg08060	Silver-seed gourd	carcmoB0511

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh16G002830	CmoCh04G004090	Cucurbita moschata (Rifu)	cmocmoB289

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh16G002830	Cucurbita moschata (Rifu)	cmocmoB286
CmoCh16G002830	Cucumber (Gy14) v1	cgycmoB1100
CmoCh16G002830	Cucurbita maxima (Rimu)	cmacmoB133
CmoCh16G002830	Cucurbita maxima (Rimu)	cmacmoB322
CmoCh16G002830	Cucurbita maxima (Rimu)	cmacmoB701
CmoCh16G002830	Cucurbita maxima (Rimu)	cmacmoB705
CmoCh16G002830	Wild cucumber (PI 183967)	cmocpiB333
CmoCh16G002830	Cucumber (Chinese Long) v2	cmocuB326
CmoCh16G002830	Melon (DHL92) v3.5.1	cmomeB295
CmoCh16G002830	Melon (DHL92) v3.5.1	cmomeB296
CmoCh16G002830	Watermelon (Charleston Gray)	cmowcgB273
CmoCh16G002830	Watermelon (97103) v1	cmowmB287
CmoCh16G002830	Cucurbita pepo (Zucchini)	cmocpeB311
CmoCh16G002830	Bottle gourd (USVL1VR-Ls)	cmolsiB294
CmoCh16G002830	Cucumber (Gy14) v2	cgybcmoB468
CmoCh16G002830	Melon (DHL92) v3.6.1	cmomedB338
CmoCh16G002830	Melon (DHL92) v3.6.1	cmomedB339
CmoCh16G002830	Silver-seed gourd	carcmoB0509
CmoCh16G002830	Cucumber (Chinese Long) v3	cmocucB0389
CmoCh16G002830	Watermelon (97103) v2	cmowmbB316
CmoCh16G002830	Wax gourd	cmowgoB0405
CmoCh16G002830	Wax gourd	cmowgoB0420