Carg19739 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19739
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	E3 ubiquitin-protein ligase synoviolin
Location	Cucurbita_argyrosperma_scaffold_133 : 434547 .. 436379 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGGGTACCGATGATATTTTAGCATCACATATATTGTTTCATTTGGCTGACATTTCAACTTCTCATATGGCAGTGCAGTCGAGAATGATGAAGCTGCAAACATATGCAGGGATTAGTTTCATTGCAACCATAGTGGTTATCTATCATGCCTTCAACAGTAGAGGCCAGTTCTACCCAGCACTGGTCTATTTATCGACTTCCAAGATAAATCTAGTGCTTCTTCTCAATATGGGTCTAGTCATCATGTGCATTTTGTGGCAGCTAACAAAGAAAATATTTCTCGGTTCTCTTAGAGAAGCAGAGGTTGAGAGGCTCAACGAGCAATCATGGAAGGAGTTGATGGAAATCCTCTTTGCCATAACTATTTTCCGCCAAGATTTTTCTGTTTCATTCCTTGGTATGGTTACGGCTCTGTTGTTGATCAAAGCTTTGCATTGGTTGGCTCAGAAGAGGGTTGAATACATGGAAACTACTCCATCGGTGCCGTTGTTGTCTCATATCCGGATAGTTTCCTTCTTAGGCTTCCTCTTTGTTCTAGATAGTCTGTTTTTTTATAATTCGATAGAATCTCTGATACAGACAAGGAAGGCCTCGGTTTCCCTCTTCTTTTCATTTGAGTAAGATTTCAAATATCCTATGATGTTTTCTTATGACCCTTAGAAGCTCTTATATCATCATAAAATAAAGTCAATGACTTGTTTTTCAGGTATATGATTCTTGCAACAACGGCTGTGTCAACGTTTGTAAAATATATTTTCTATGTCAGTGATGTACTCATGGAGGGACAATGGGAAAGGAAGCCCGTCTATACATTTTACTTGGAACTTATCCGAGACTTACTTCACTTGTCAATGTACCTGTGTTTCTTTCTTGTGATTTTCATGTAAGTACTCTAGCTACACCTGTTAAGCTATCTCATTCTTCTGAACTGGAAGTTCAGAATTAATTTCTTCTGCATATATGTGCTCATATTGCGTATGCCCAAATGTTAAAGTAGTAAAACACTGGCTCTTCTAAAGAAATACTATGCAAACCAATAAAAAACGAATGTGGTTACTGGGATTTGTGTCCTTACATGTATCAATGGCTGTCGTATTTTGCTCTCATGTTAATTGTGGGAGAAGCCTCATAAGTCATAACATTAGTGTCTTATGACTGACATGGTCTTTGTTGTTTGTTTGGATATCCTTTTCATTCATTTCCAATCAGTCGTTGTTCTTAATTTCTTTCCTCTTTTAAGATTGAAAGCGGCAGTTGTTGTTCTAAATAAGTCGATTACTATCCCAAAGGTTGATGGTTCGATCCTCAACCTAAAAAGTTGAAGTTACATCCATATCAACTTCATCCCCATTTCACATCTTGATTTTGCTGACTTTGACTTTGCTCTTGCAGGACCTATGGTGTGCCTTTGCACTTGATCCGAGAGCTCTATGAGATCTTTAGGAATTTTAGGATTCGTATTGCAGATTACATCCGTTATAGAAAGATTACTTCAAACATGAATGATCGCTTTCCTGATGCAACGCCTGAAGAACTCAATTCGTGCGTGCATGCTTGGTCAACTTGTTGTTTCTTTTATGCTTCCAGTACTTTTATATTGGCTACTAAAAATCCTTCTATGGAATTGTAGAAGTGACGCAACATGCATTATCTGTCGTGAAGAGATGACAGTTGCAAAGAAACTAGTATGTGGACATCTTTTTCATGTCCATTGCCTCCGATCCTGGTTGGAGCGACAACATACTTGCCCAACCTGCAGAGCCCTTGTTGTACCACCTGAAGGTTCAAGCACAGCAGCCGGTCATCATGGACCACAATCTGATGCTAACCAA

mRNA sequence

GATGGGTACCGATGATATTTTAGCATCACATATATTGTTTCATTTGGCTGACATTTCAACTTCTCATATGGCAGTGCAGTCGAGAATGATGAAGCTGCAAACATATGCAGGGATTAGTTTCATTGCAACCATAGTGGTTATCTATCATGCCTTCAACAGTAGAGGCCAGTTCTACCCAGCACTGGTCTATTTATCGACTTCCAAGATAAATCTAGTGCTTCTTCTCAATATGGGTCTAGTCATCATGTGCATTTTGTGGCAGCTAACAAAGAAAATATTTCTCGGTTCTCTTAGAGAAGCAGAGGTTGAGAGGCTCAACGAGCAATCATGGAAGGAGTTGATGGAAATCCTCTTTGCCATAACTATTTTCCGCCAAGATTTTTCTGTTTCATTCCTTGGTATGGTTACGGCTCTGTTGTTGATCAAAGCTTTGCATTGGTTGGCTCAGAAGAGGGTTGAATACATGGAAACTACTCCATCGGTGCCGTTGTTGTCTCATATCCGGATAGTTTCCTTCTTAGGCTTCCTCTTTGTTCTAGATAGTCTGTTTTTTTATAATTCGATAGAATCTCTGATACAGACAAGGAAGGCCTCGGTTTCCCTCTTCTTTTCATTTGAGTATATGATTCTTGCAACAACGGCTGTGTCAACGTTTGTAAAATATATTTTCTATGTCAGTGATGTACTCATGGAGGGACAATGGGAAAGGAAGCCCGTCTATACATTTTACTTGGAACTTATCCGAGACTTACTTCACTTGTCAATGTACCTGTGTTTCTTTCTTGTGATTTTCATGACCTATGGTGTGCCTTTGCACTTGATCCGAGAGCTCTATGAGATCTTTAGGAATTTTAGGATTCGTATTGCAGATTACATCCGTTATAGAAAGATTACTTCAAACATGAATGATCGCTTTCCTGATGCAACGCCTGAAGAACTCAATTCAAGTGACGCAACATGCATTATCTGTCGTGAAGAGATGACAGTTGCAAAGAAACTAGTATGTGGACATCTTTTTCATGTCCATTGCCTCCGATCCTGGTTGGAGCGACAACATACTTGCCCAACCTGCAGAGCCCTTGTTGTACCACCTGAAGGTTCAAGCACAGCAGCCGGTCATCATGGACCACAATCTGATGCTAACCAA

Coding sequence (CDS)

ATGGGTACCGATGATATTTTAGCATCACATATATTGTTTCATTTGGCTGACATTTCAACTTCTCATATGGCAGTGCAGTCGAGAATGATGAAGCTGCAAACATATGCAGGGATTAGTTTCATTGCAACCATAGTGGTTATCTATCATGCCTTCAACAGTAGAGGCCAGTTCTACCCAGCACTGGTCTATTTATCGACTTCCAAGATAAATCTAGTGCTTCTTCTCAATATGGGTCTAGTCATCATGTGCATTTTGTGGCAGCTAACAAAGAAAATATTTCTCGGTTCTCTTAGAGAAGCAGAGGTTGAGAGGCTCAACGAGCAATCATGGAAGGAGTTGATGGAAATCCTCTTTGCCATAACTATTTTCCGCCAAGATTTTTCTGTTTCATTCCTTGGTATGGTTACGGCTCTGTTGTTGATCAAAGCTTTGCATTGGTTGGCTCAGAAGAGGGTTGAATACATGGAAACTACTCCATCGGTGCCGTTGTTGTCTCATATCCGGATAGTTTCCTTCTTAGGCTTCCTCTTTGTTCTAGATAGTCTGTTTTTTTATAATTCGATAGAATCTCTGATACAGACAAGGAAGGCCTCGGTTTCCCTCTTCTTTTCATTTGAGTATATGATTCTTGCAACAACGGCTGTGTCAACGTTTGTAAAATATATTTTCTATGTCAGTGATGTACTCATGGAGGGACAATGGGAAAGGAAGCCCGTCTATACATTTTACTTGGAACTTATCCGAGACTTACTTCACTTGTCAATGTACCTGTGTTTCTTTCTTGTGATTTTCATGACCTATGGTGTGCCTTTGCACTTGATCCGAGAGCTCTATGAGATCTTTAGGAATTTTAGGATTCGTATTGCAGATTACATCCGTTATAGAAAGATTACTTCAAACATGAATGATCGCTTTCCTGATGCAACGCCTGAAGAACTCAATTCAAGTGACGCAACATGCATTATCTGTCGTGAAGAGATGACAGTTGCAAAGAAACTAGTATGTGGACATCTTTTTCATGTCCATTGCCTCCGATCCTGGTTGGAGCGACAACATACTTGCCCAACCTGCAGAGCCCTTGTTGTACCACCTGAAGGTTCAAGCACAGCAGCCGGTCATCATGGACCACAATCTGATGCTAACCAA

Protein sequence

MGTDDILASHILFHLADISTSHMAVQSRMMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQLTKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLAQKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYMILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYGVPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMTVAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAAGHHGPQSDANQ

Homology

[Close]

BLAST of Carg19739 vs. NCBI nr
Match: XP_023553481.1 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita pepo subsp. pepo] >XP_023553482.1 ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 687.2 bits (1772), Expect = 3.2e-194
Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 0


Query: 29  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 88
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 89  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 148
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 120

Query: 149 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 208
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180

Query: 209 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 268
           ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 269 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 328
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 329 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAAGHHGPQSDANQ 383
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAAGHHGPQSDANQ
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAAGHHGPQSDANQ 354

[Close]

BLAST of Carg19739 vs. NCBI nr
Match: XP_022922503.1 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita moschata] >XP_022922504.1 ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita moschata])

HSP 1 Score: 684.9 bits (1766), Expect = 1.6e-193
Identity = 353/354 (99.72%), Postives = 353/354 (99.72%), Query Frame = 0


Query: 29  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 88
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 89  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 148
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 120

Query: 149 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 208
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180

Query: 209 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 268
           ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 269 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 328
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 329 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAAGHHGPQSDANQ 383
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEG STAAGHHGPQSDANQ
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGLSTAAGHHGPQSDANQ 354

[Close]

BLAST of Carg19739 vs. NCBI nr
Match: XP_022984215.1 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita maxima] >XP_022984216.1 ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita maxima])

HSP 1 Score: 683.7 bits (1763), Expect = 3.6e-193
Identity = 352/354 (99.44%), Postives = 353/354 (99.72%), Query Frame = 0


Query: 29  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 88
           MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGL+IMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLIIMCILWQL 60

Query: 89  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 148
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 120

Query: 149 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 208
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 180

Query: 209 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 268
           ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 269 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 328
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDAT EELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATSEELNSSDATCIICREEMT 300

Query: 329 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAAGHHGPQSDANQ 383
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAAGHHGPQSDANQ
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAAGHHGPQSDANQ 354

[Close]

BLAST of Carg19739 vs. NCBI nr
Match: XP_008455400.1 (PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucumis melo] >XP_016902283.1 PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucumis melo])

HSP 1 Score: 677.6 bits (1747), Expect = 2.5e-191
Identity = 348/354 (98.31%), Postives = 352/354 (99.44%), Query Frame = 0


Query: 29  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 88
           MMKLQTYAGISFIATI+VIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIMVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 89  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 148
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSV+FLGMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120

Query: 149 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 208
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSI+SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIDSLIQTRKASVSLFFSFEYM 180

Query: 209 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 268
           ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 269 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 328
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 329 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAAGHHGPQSDANQ 383
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSST +GHHG QSDANQ
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTSGHHGVQSDANQ 354

[Close]

BLAST of Carg19739 vs. NCBI nr
Match: XP_004139202.1 (PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B [Cucumis sativus] >KGN60852.1 hypothetical protein Csa_2G013330 [Cucumis sativus])

HSP 1 Score: 677.2 bits (1746), Expect = 3.3e-191
Identity = 348/354 (98.31%), Postives = 351/354 (99.15%), Query Frame = 0


Query: 29  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 88
           MMKLQTYAGISFIATI+VIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIMVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 89  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 148
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSV+FLGMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120

Query: 149 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 208
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSI+SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIDSLIQTRKASVSLFFSFEYM 180

Query: 209 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 268
           ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 269 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 328
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 329 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAAGHHGPQSDANQ 383
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSST  GHHG QSDANQ
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTTGHHGVQSDANQ 354

[Close]

BLAST of Carg19739 vs. TAIR10
Match: AT3G16090.1 (RING/U-box superfamily protein)

HSP 1 Score: 555.4 bits (1430), Expect = 2.6e-158
Identity = 277/343 (80.76%), Postives = 314/343 (91.55%), Query Frame = 0


Query: 29  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 88
           M++L+TYAG+SF+AT+ VIYHAF+SRGQFYPA VYLSTSKI+LVLLLNM LV+M  LW L
Sbjct: 1   MIRLRTYAGLSFMATLAVIYHAFSSRGQFYPATVYLSTSKISLVLLLNMCLVLMLSLWHL 60

Query: 89  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 148
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFS  FL +V  LLLIKALHWLA
Sbjct: 61  VKFVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSSGFLPLVVTLLLIKALHWLA 120

Query: 149 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 208
           QKRVEY+ETTPSV  LSH RIVSF+GFL ++DSLF Y+SI  LIQ+R+ASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPSVSKLSHFRIVSFMGFLLLVDSLFMYSSIRHLIQSRQASVSLFFSFEYM 180

Query: 209 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 268
           ILATT V+ FVKY+FYV+D+LM+GQWE+KPVYTFYLELIRDLLHLSMY+CFF VIFM YG
Sbjct: 181 ILATTTVAIFVKYVFYVTDMLMDGQWEKKPVYTFYLELIRDLLHLSMYICFFFVIFMNYG 240

Query: 269 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 328
           VPLHL+RELYE FRNF+IR++DY+RYRKITSNMNDRFPDATPEEL +SDATCIICREEMT
Sbjct: 241 VPLHLLRELYETFRNFQIRVSDYLRYRKITSNMNDRFPDATPEELTASDATCIICREEMT 300

Query: 329 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAA 372
            AKKL+CGHLFHVHCLRSWLERQ TCPTCRALVVPPE +++AA
Sbjct: 301 NAKKLICGHLFHVHCLRSWLERQQTCPTCRALVVPPENATSAA 343

[Close]

BLAST of Carg19739 vs. TAIR10
Match: AT1G65040.2 (RING/U-box superfamily protein)

HSP 1 Score: 551.6 bits (1420), Expect = 3.8e-157
Identity = 277/355 (78.03%), Postives = 318/355 (89.58%), Query Frame = 0


Query: 29  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 88
           M++L+ YAG+S +AT+VVIYHAF+SRGQFYPA VYLSTSKINLV+LLNMGLV+M  LW L
Sbjct: 1   MIQLKVYAGLSTLATLVVIYHAFSSRGQFYPATVYLSTSKINLVVLLNMGLVLMLSLWNL 60

Query: 89  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 148
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFSV F+ +V  LLLIK LHW+A
Sbjct: 61  VKIVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSVGFISLVVTLLLIKGLHWMA 120

Query: 149 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 208
           QKRVEY+ETTPSV LLSH+RIVSF+ FL +LD L  Y+SI+ LIQ+RKAS+S+FF+FEYM
Sbjct: 121 QKRVEYIETTPSVTLLSHVRIVSFMVFLLILDCLLTYSSIQQLIQSRKASMSVFFTFEYM 180

Query: 209 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 268
           ILATT VS  VKY FYV+D+L EGQWE KPVYTFYLEL+RDLLHLSMYLCFFL+IFM YG
Sbjct: 181 ILATTTVSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNYG 240

Query: 269 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 328
           +PLHLIRELYE FRNF+IR+ DY+RYRKITSNMNDRFPDATPEEL+S+DATCIICREEMT
Sbjct: 241 LPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEMT 300

Query: 329 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTAAGHHGPQSDANQ 383
            AKKLVCGHLFHVHCLRSWLERQ+TCPTCRALVVP E  +STA+G+ GP  ++ Q
Sbjct: 301 SAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQ 355

[Close]

BLAST of Carg19739 vs. TAIR10
Match: AT4G25230.1 (RPM1 interacting protein 2)

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-19
Identity = 97/343 (28.28%), Postives = 153/343 (44.61%), Query Frame = 0


Query: 53  SRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQLTKKIFLGSLREAEVERLNEQSWKE 112
           S G    AL  L  S   + LL N  L +  +L    K +F G L + E ++L E+    
Sbjct: 42  SLGDSEHALELLLGSYFTIALLTNFVLNVYILLVLSLKTLFFGDLYDVETKKLVERLANY 101

Query: 113 L------MEILFAITIFRQDFSVSFLGMVTALLLIKALHWLAQKRVEYMETTPSVPLLSH 172
           +      + ++   TIF+    V +   +T L  +K    LA+ R+E +  +PS    ++
Sbjct: 102 IIYKGTFLPLVIPPTIFQ---GVLWTVWLTVLCTLKMFQALARDRLERLNASPSSTPWTY 161

Query: 173 IRIVSFLGFLFVLD------SLFFYNSIESLIQTRKASVSLFFSFE----YMILATTAVS 232
            R+ S L  +  +D      SL  YN+I S +           +FE     +I     + 
Sbjct: 162 FRVYSVLFLVLSVDMFWIKLSLMTYNTIGSAVYLLLLFEPCSIAFETLQALLIHGFQLLD 221

Query: 233 TFVKYIF----------YVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMT 292
            ++ ++           ++  +      E K +    L    D+  L M L  +L I+  
Sbjct: 222 MWINHLAVKNSDCQRSKFIDSMTAGSLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWL 281

Query: 293 YGVPLHLIRELYEIFRNFRI-------RIADYIRYRKITSNMNDRFPDATPEELNSSDAT 352
           +G+  HL+  +  +F N R        RI  YI+ R     ++   PDAT EEL + D  
Sbjct: 282 HGIAFHLVDAV--LFLNIRALLSAILKRIKGYIKLRIALGALHAALPDATSEELRAYDDE 341

Query: 353 CIICREEMTVAKKLVCGHLFHVHCLRSWLER----QHTCPTCR 359
           C ICRE M  AK+L C HLFH+ CLRSWL++     ++CPTCR
Sbjct: 342 CAICREPMAKAKRLHCNHLFHLGCLRSWLDQGLNEVYSCPTCR 379

[Close]

BLAST of Carg19739 vs. TAIR10
Match: AT5G51450.2 (RPM1 interacting protein 3)

HSP 1 Score: 82.4 bits (202), Expect = 6.6e-16
Identity = 97/350 (27.71%), Postives = 148/350 (42.29%), Query Frame = 0


Query: 53  SRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQLTKKIFLGSLREAEVERLNEQSWKE 112
           S G     L  L +S   + LL +  L I  +L    K +F G L   E  +L E+    
Sbjct: 42  SLGNSENTLELLLSSHTTIALLASFVLNIYILLVLSLKTLFFGDLYAIETRKLVERLANY 101

Query: 113 L------MEILFAITIFRQDFSVSFLGMVTALLLIKALHWLAQKRVEYMETTPSVPLLSH 172
           +      +  +   T+F+    V +   +T L  +K    LA+ R++ +  +PS    ++
Sbjct: 102 IIYKGTFLPFVVPRTVFQ---GVLWTIWLTVLCTLKMFQALARDRLDRLNASPSSTPWTY 161

Query: 173 IRIVSFLGFLFVLD------SLFFYNSIESLIQTRKASVSLFFSFEYMILATTAVSTFVK 232
            R+ S L  +   D      SL  YN++ S       SV L   FE   +A   +   + 
Sbjct: 162 FRVYSALFMVLSTDLCWIKLSLMIYNTVGS-------SVYLLLLFEPCGIAFETLQALLI 221

Query: 233 YIFYVSDVLME---------------------GQWERKPVYTFYLELIRDLLHLSMYLCF 292
           + F + D+ +                         E K +    L    D+  L M L  
Sbjct: 222 HGFQLLDMWINHLAVKNSDCQRSKFYDSMTAGSLLEWKGLLNRNLGFFLDMATLVMALGH 281

Query: 293 FLVIFMTYGVPLHLIRELYEIFRNFRI-------RIADYIRYRKITSNMNDRFPDATPEE 352
           +L I+  +G+  HL+  +  +F N R        RI  YI+ R     ++    DAT EE
Sbjct: 282 YLHIWWLHGMAFHLVDAV--LFLNIRALLSSILKRIKGYIKLRVALGALHAALLDATSEE 341

Query: 353 LNSSDATCIICREEMTVAKKLVCGHLFHVHCLRSWLER----QHTCPTCR 359
           L   D  C ICRE M  AK+L C HLFH+ CLRSWL++     ++CPTCR
Sbjct: 342 LRDYDDECAICREPMAKAKRLHCNHLFHLGCLRSWLDQGLNEVYSCPTCR 379

[Close]

BLAST of Carg19739 vs. TAIR10
Match: AT5G01960.1 (RING/U-box superfamily protein)

HSP 1 Score: 57.4 bits (137), Expect = 2.3e-08
Identity = 41/137 (29.93%), Postives = 65/137 (47.45%), Query Frame = 0


Query: 242 FYLELIRDLLHLSMYLCFFL-----VIFMTYGVPLHLIRELYEIFRNFRIRIADYIRYRK 301
           +++ L R LL   ++  FFL      +F +    L+L  +L  +      ++  +    K
Sbjct: 285 YFMLLYRSLLPTPVWYRFFLNKDYGSLFSSLMTGLYLTFKLTSVVE----KVQSFFTALK 344

Query: 302 ITSNMNDRFPD-ATPEELNSSDATCIICREEMTVAKKLVCGHLFHVHCLRSWLERQHTCP 361
             S     +   AT E++N++   C IC+E+M     L C H+F   C+  W ER+ TCP
Sbjct: 345 ALSRKEVHYGSYATTEQVNAAGDLCAICQEKMHTPILLRCKHMFCEDCVSEWFERERTCP 404

Query: 362 TCRALVVPPEGSSTAAG 373
            CRALV P +  S   G
Sbjct: 405 LCRALVKPADLKSFGDG 417

[Close]

BLAST of Carg19739 vs. Swiss-Prot
Match: sp|Q9LW77|HRD1A_ARATH (ERAD-associated E3 ubiquitin-protein ligase HRD1A OS=Arabidopsis thaliana OX=3702 GN=HRD1A PE=2 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 4.8e-157
Identity = 277/343 (80.76%), Postives = 314/343 (91.55%), Query Frame = 0


Query: 29  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 88
           M++L+TYAG+SF+AT+ VIYHAF+SRGQFYPA VYLSTSKI+LVLLLNM LV+M  LW L
Sbjct: 1   MIRLRTYAGLSFMATLAVIYHAFSSRGQFYPATVYLSTSKISLVLLLNMCLVLMLSLWHL 60

Query: 89  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 148
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFS  FL +V  LLLIKALHWLA
Sbjct: 61  VKFVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSSGFLPLVVTLLLIKALHWLA 120

Query: 149 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 208
           QKRVEY+ETTPSV  LSH RIVSF+GFL ++DSLF Y+SI  LIQ+R+ASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPSVSKLSHFRIVSFMGFLLLVDSLFMYSSIRHLIQSRQASVSLFFSFEYM 180

Query: 209 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 268
           ILATT V+ FVKY+FYV+D+LM+GQWE+KPVYTFYLELIRDLLHLSMY+CFF VIFM YG
Sbjct: 181 ILATTTVAIFVKYVFYVTDMLMDGQWEKKPVYTFYLELIRDLLHLSMYICFFFVIFMNYG 240

Query: 269 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 328
           VPLHL+RELYE FRNF+IR++DY+RYRKITSNMNDRFPDATPEEL +SDATCIICREEMT
Sbjct: 241 VPLHLLRELYETFRNFQIRVSDYLRYRKITSNMNDRFPDATPEELTASDATCIICREEMT 300

Query: 329 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAA 372
            AKKL+CGHLFHVHCLRSWLERQ TCPTCRALVVPPE +++AA
Sbjct: 301 NAKKLICGHLFHVHCLRSWLERQQTCPTCRALVVPPENATSAA 343

[Close]

BLAST of Carg19739 vs. Swiss-Prot
Match: sp|Q6NPT7|HRD1B_ARATH (ERAD-associated E3 ubiquitin-protein ligase HRD1B OS=Arabidopsis thaliana OX=3702 GN=HRD1B PE=2 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 6.9e-156
Identity = 277/355 (78.03%), Postives = 318/355 (89.58%), Query Frame = 0


Query: 29  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 88
           M++L+ YAG+S +AT+VVIYHAF+SRGQFYPA VYLSTSKINLV+LLNMGLV+M  LW L
Sbjct: 1   MIQLKVYAGLSTLATLVVIYHAFSSRGQFYPATVYLSTSKINLVVLLNMGLVLMLSLWNL 60

Query: 89  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 148
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFSV F+ +V  LLLIK LHW+A
Sbjct: 61  VKIVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSVGFISLVVTLLLIKGLHWMA 120

Query: 149 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 208
           QKRVEY+ETTPSV LLSH+RIVSF+ FL +LD L  Y+SI+ LIQ+RKAS+S+FF+FEYM
Sbjct: 121 QKRVEYIETTPSVTLLSHVRIVSFMVFLLILDCLLTYSSIQQLIQSRKASMSVFFTFEYM 180

Query: 209 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 268
           ILATT VS  VKY FYV+D+L EGQWE KPVYTFYLEL+RDLLHLSMYLCFFL+IFM YG
Sbjct: 181 ILATTTVSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNYG 240

Query: 269 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 328
           +PLHLIRELYE FRNF+IR+ DY+RYRKITSNMNDRFPDATPEEL+S+DATCIICREEMT
Sbjct: 241 LPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEMT 300

Query: 329 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTAAGHHGPQSDANQ 383
            AKKLVCGHLFHVHCLRSWLERQ+TCPTCRALVVP E  +STA+G+ GP  ++ Q
Sbjct: 301 SAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQ 355

[Close]

BLAST of Carg19739 vs. Swiss-Prot
Match: sp|Q5Z880|HRD1_ORYSJ (ERAD-associated E3 ubiquitin-protein ligase HRD1 OS=Oryza sativa subsp. japonica OX=39947 GN=HRD1 PE=2 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 2.7e-152
Identity = 267/347 (76.95%), Postives = 308/347 (88.76%), Query Frame = 0


Query: 29  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 88
           M++LQTYA  S +AT   +Y+AF+SR QFYPA+VYLSTSKI  VLLLN GLV MC+ WQL
Sbjct: 1   MIRLQTYAAFSLMATATAVYYAFSSREQFYPAMVYLSTSKICFVLLLNTGLVAMCVAWQL 60

Query: 89  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 148
            K++FLG+LREAEVERLNEQ+W+E++EILFA+TIFRQDFSVSFL MV ALLL+KALHWLA
Sbjct: 61  VKRLFLGTLREAEVERLNEQAWREVVEILFAVTIFRQDFSVSFLAMVAALLLVKALHWLA 120

Query: 149 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 208
           QKRVEY+ETTPSVP+LSH RIVSF+ FL V+D LF  NS+ SLI  R+ASV++FFSFEYM
Sbjct: 121 QKRVEYIETTPSVPMLSHARIVSFMLFLLVVDCLFLSNSLRSLIHKREASVAIFFSFEYM 180

Query: 209 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 268
           ILAT+ VSTFVKYIFYVSD+LMEGQWE+K VYTFYLELI DL+HLS+Y+ FF+ IF+ YG
Sbjct: 181 ILATSTVSTFVKYIFYVSDMLMEGQWEKKAVYTFYLELISDLVHLSLYMLFFIAIFLNYG 240

Query: 269 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 328
           VPLHLIRELYE FRNFRIRIADY+RYRKITSNMN+RFPDAT +ELN+SDATCIICREEMT
Sbjct: 241 VPLHLIRELYETFRNFRIRIADYVRYRKITSNMNERFPDATADELNASDATCIICREEMT 300

Query: 329 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAAGHHG 376
            AKKL+CGHLFHVHCLRSWLERQHTCPTCRA ++PP+   TAA  HG
Sbjct: 301 TAKKLLCGHLFHVHCLRSWLERQHTCPTCRAPILPPDNGRTAARPHG 347

[Close]

BLAST of Carg19739 vs. Swiss-Prot
Match: sp|Q803I8|SYVN1_DANRE (E3 ubiquitin-protein ligase synoviolin OS=Danio rerio OX=7955 GN=syvn1 PE=2 SV=2)

HSP 1 Score: 263.8 bits (673), Expect = 2.9e-69
Identity = 141/331 (42.60%), Postives = 201/331 (60.73%), Query Frame = 0


Query: 29  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 88
           M++       S   T  V+ HA+  + QFYP +VYL+ S  ++ +L     V++ +L +L
Sbjct: 1   MVRAALVTATSLALTGAVVAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKL 60

Query: 89  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 148
            +K+F G LR AE+E L E+SW  + E   A T+FR DFS  F+ + T LL +K  HWLA
Sbjct: 61  MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA 120

Query: 149 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 208
           + RV++ME +P++  + H R++S +  L V+D LF  ++  S+I TR ASV L F FEY 
Sbjct: 121 EDRVDFMERSPNISWVFHFRVLSLMVLLGVMDFLFVNHACHSII-TRGASVQLVFGFEYA 180

Query: 209 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 268
           IL T  ++TF+KY  +  D+  E  W+ K VY  Y EL    + + +Y+ F  ++   + 
Sbjct: 181 ILMTMVLTTFIKYTLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHT 240

Query: 269 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEM- 328
            PL  IR +Y   R F+  + D I  R+   NMN  +PDATPE+L ++D  CIICREEM 
Sbjct: 241 FPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQATDNVCIICREEMV 300

Query: 329 TVAKKLVCGHLFHVHCLRSWLERQHTCPTCR 359
           T AKKL C H+FH  CLRSW +RQ TCPTCR
Sbjct: 301 TGAKKLPCNHIFHSSCLRSWFQRQQTCPTCR 330

[Close]

BLAST of Carg19739 vs. Swiss-Prot
Match: sp|Q86TM6|SYVN1_HUMAN (E3 ubiquitin-protein ligase synoviolin OS=Homo sapiens OX=9606 GN=SYVN1 PE=1 SV=2)

HSP 1 Score: 261.5 bits (667), Expect = 1.4e-68
Identity = 141/331 (42.60%), Postives = 198/331 (59.82%), Query Frame = 0


Query: 29  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 88
           M +       S   T  V+ HA+  + QFYP +VYL+ S  ++ +L     V++ +L ++
Sbjct: 1   MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV 60

Query: 89  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 148
             K+F G LR AE+E L E+SW  + E   A T+FR DFS  F+ + T LL +K  HWLA
Sbjct: 61  MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA 120

Query: 149 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 208
           + RV++ME +P++  L H RIVS +  L +LD LF  ++  S++ TR ASV L F FEY 
Sbjct: 121 EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSIL-TRGASVQLVFGFEYA 180

Query: 209 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 268
           IL T  ++ F+KY+ +  D+  E  W+ K VY  Y EL    + + +Y+ F  ++   + 
Sbjct: 181 ILMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHT 240

Query: 269 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEM- 328
            PL  IR +Y   R F+  + D I  R+   NMN  +PDATPEEL + D  CIICREEM 
Sbjct: 241 FPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMV 300

Query: 329 TVAKKLVCGHLFHVHCLRSWLERQHTCPTCR 359
           T AK+L C H+FH  CLRSW +RQ TCPTCR
Sbjct: 301 TGAKRLPCNHIFHTSCLRSWFQRQQTCPTCR 330

[Close]

BLAST of Carg19739 vs. TrEMBL
Match: tr|A0A1S4E231|A0A1S4E231_CUCME (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like OS=Cucumis melo OX=3656 GN=LOC103495570 PE=4 SV=1)

HSP 1 Score: 677.6 bits (1747), Expect = 1.7e-191
Identity = 348/354 (98.31%), Postives = 352/354 (99.44%), Query Frame = 0


Query: 29  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 88
           MMKLQTYAGISFIATI+VIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIMVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 89  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 148
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSV+FLGMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120

Query: 149 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 208
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSI+SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIDSLIQTRKASVSLFFSFEYM 180

Query: 209 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 268
           ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 269 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 328
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 329 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAAGHHGPQSDANQ 383
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSST +GHHG QSDANQ
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTSGHHGVQSDANQ 354

[Close]

BLAST of Carg19739 vs. TrEMBL
Match: tr|A0A0A0LJG4|A0A0A0LJG4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G013330 PE=4 SV=1)

HSP 1 Score: 677.2 bits (1746), Expect = 2.2e-191
Identity = 348/354 (98.31%), Postives = 351/354 (99.15%), Query Frame = 0


Query: 29  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 88
           MMKLQTYAGISFIATI+VIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL
Sbjct: 1   MMKLQTYAGISFIATIMVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 89  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 148
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSV+FLGMVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120

Query: 149 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 208
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSI+SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIDSLIQTRKASVSLFFSFEYM 180

Query: 209 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 268
           ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 269 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 328
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 329 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAAGHHGPQSDANQ 383
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSST  GHHG QSDANQ
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTTGHHGVQSDANQ 354

[Close]

BLAST of Carg19739 vs. TrEMBL
Match: tr|A0A2P4ID24|A0A2P4ID24_QUESU (Erad-associated e3 ubiquitin-protein ligase hrd1a OS=Quercus suber OX=58331 GN=CFP56_29271 PE=4 SV=1)

HSP 1 Score: 620.9 bits (1600), Expect = 1.9e-174
Identity = 311/359 (86.63%), Postives = 339/359 (94.43%), Query Frame = 0


Query: 24  AVQSRMMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMC 83
           +V  +MMKL TYAG+S IAT+ VIYHAFNSRGQFYPA+VYLSTSKI+LVLLLNMGLVIMC
Sbjct: 16  SVWRKMMKLHTYAGLSLIATLAVIYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVIMC 75

Query: 84  ILWQLTKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKA 143
           ILWQLTK++FLGSLREAEVERLNEQSW+E+MEILFAITIFRQDFSV+FL MVTALLLIKA
Sbjct: 76  ILWQLTKRVFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKA 135

Query: 144 LHWLAQKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFF 203
           LHWLAQKRVEY+ETTPSVP+LSHIRIVSFLGFL +LDSLF Y++I+ LI+TR ASVSLFF
Sbjct: 136 LHWLAQKRVEYIETTPSVPMLSHIRIVSFLGFLLLLDSLFLYSNIKYLIETRHASVSLFF 195

Query: 204 SFEYMILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVI 263
           SFEYMILATT VSTFVKY+FYVSD+LMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVI
Sbjct: 196 SFEYMILATTTVSTFVKYVFYVSDMLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVI 255

Query: 264 FMTYGVPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIIC 323
           FM YGVPLHLIRELYE FRNF+IRIADYIRYRKITSNMNDRFPDATPEELN+SDATCIIC
Sbjct: 256 FMHYGVPLHLIRELYETFRNFKIRIADYIRYRKITSNMNDRFPDATPEELNASDATCIIC 315

Query: 324 REEMTVAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAAGHHGPQSDANQ 383
           REEMT AKKL+CGHLFHVHCLRSWLERQHTCPTCRALVVPPE  +T +G HG ++D NQ
Sbjct: 316 REEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTTTSGGHGSRADVNQ 374

[Close]

BLAST of Carg19739 vs. TrEMBL
Match: tr|A0A2N9J6R5|A0A2N9J6R5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59933 PE=4 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 4.2e-174
Identity = 309/354 (87.29%), Postives = 337/354 (95.20%), Query Frame = 0


Query: 29  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 88
           MM+LQTYAG+S IAT+ V+YHAFNSRGQFYPA+VYLSTSKI+LVLLLNMGLVIMCILWQL
Sbjct: 1   MMRLQTYAGVSLIATLAVVYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCILWQL 60

Query: 89  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 148
           TK++FLGSLREAEVERLNEQSW+E+MEILFAITIFRQDFSV+FL MVTALLLIKALHWLA
Sbjct: 61  TKRVFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLA 120

Query: 149 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 208
           QKRVEY+ETTPSVP+LSHIRIVSFLGFL +LDSLF Y++I+ LI+TR ASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPSVPMLSHIRIVSFLGFLLLLDSLFLYSNIKYLIETRHASVSLFFSFEYM 180

Query: 209 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 268
           ILATT VSTFVKY+FYVSD+LMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVIFM YG
Sbjct: 181 ILATTTVSTFVKYVFYVSDMLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMHYG 240

Query: 269 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 328
           VPLHLIRELYE FRNF+IRIADYIRYRKITSNMNDRFPDATPEELN+SDATCIICREEMT
Sbjct: 241 VPLHLIRELYETFRNFKIRIADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMT 300

Query: 329 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAAGHHGPQSDANQ 383
            AKKL+CGHLFHVHCLRSWLERQHTCPTCRALVVPPE  ++ AG HG ++D NQ
Sbjct: 301 TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTSTAGGHGSRADVNQ 354

[Close]

BLAST of Carg19739 vs. TrEMBL
Match: tr|A0A2P5AY33|A0A2P5AY33_PARAD (E3 ubiquitin-protein ligase synoviolin/Hrd OS=Parasponia andersonii OX=3476 GN=PanWU01x14_289190 PE=4 SV=1)

HSP 1 Score: 615.1 bits (1585), Expect = 1.0e-172
Identity = 307/355 (86.48%), Postives = 336/355 (94.65%), Query Frame = 0


Query: 29  MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 88
           MM+LQTYAG+SF+AT+ VIYHAFNSRGQFYPA+VYLSTSKI+LVLLLNMGLV+MCILWQL
Sbjct: 1   MMRLQTYAGLSFVATLAVIYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVVMCILWQL 60

Query: 89  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVSFLGMVTALLLIKALHWLA 148
           TK++FLGSLREAEVERLNEQSW+E+MEILFAITIFRQDFSVSFL MVTALLLIKALHWLA
Sbjct: 61  TKRVFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVSFLAMVTALLLIKALHWLA 120

Query: 149 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIESLIQTRKASVSLFFSFEYM 208
           QKRVEY+ETTP+V  LSHIRIVSFLGFLF LDSLF Y S+  LIQ+RKASVS+FFSFEYM
Sbjct: 121 QKRVEYIETTPTVTKLSHIRIVSFLGFLFTLDSLFLYTSVNDLIQSRKASVSVFFSFEYM 180

Query: 209 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 268
           ILATT VSTFVKY+FYVSD+LMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVIFM YG
Sbjct: 181 ILATTTVSTFVKYVFYVSDMLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMNYG 240

Query: 269 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 328
           VPLHLIRELYE FRNF+IR+ADYIRYRKITSNMNDRFPDATPEELN++DATCIICREEMT
Sbjct: 241 VPLHLIRELYETFRNFKIRVADYIRYRKITSNMNDRFPDATPEELNATDATCIICREEMT 300

Query: 329 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTAAGHHGPQSDANQ 383
            AKKL+CGHLFHVHCLRSWLERQHTCPTCRALVVPP+ G+S  AG + P+SD +Q
Sbjct: 301 TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPDNGASVTAGQNAPRSDTHQ 355

The following BLAST results are available for this feature:

BLAST of Carg19739 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023553481.1	3.2e-194	100.00	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita pepo subsp. pe...	[more]
XP_022922503.1	1.6e-193	99.72	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita moschata] >XP_...	[more]
XP_022984215.1	3.6e-193	99.44	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucurbita maxima] >XP_02...	[more]
XP_008455400.1	2.5e-191	98.31	PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Cucumis melo]...	[more]
XP_004139202.1	3.3e-191	98.31	PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B [Cucumis sativus] >...	[more]

BLAST of Carg19739 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G16090.1	2.6e-158	80.76	RING/U-box superfamily protein	[more]
AT1G65040.2	3.8e-157	78.03	RING/U-box superfamily protein	[more]
AT4G25230.1	1.3e-19	28.28	RPM1 interacting protein 2	[more]
AT5G51450.2	6.6e-16	27.71	RPM1 interacting protein 3	[more]
AT5G01960.1	2.3e-08	29.93	RING/U-box superfamily protein	[more]

BLAST of Carg19739 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LW77\|HRD1A_ARATH	4.8e-157	80.76	ERAD-associated E3 ubiquitin-protein ligase HRD1A OS=Arabidopsis thaliana OX=370...	[more]
sp\|Q6NPT7\|HRD1B_ARATH	6.9e-156	78.03	ERAD-associated E3 ubiquitin-protein ligase HRD1B OS=Arabidopsis thaliana OX=370...	[more]
sp\|Q5Z880\|HRD1_ORYSJ	2.7e-152	76.95	ERAD-associated E3 ubiquitin-protein ligase HRD1 OS=Oryza sativa subsp. japonica...	[more]
sp\|Q803I8\|SYVN1_DANRE	2.9e-69	42.60	E3 ubiquitin-protein ligase synoviolin OS=Danio rerio OX=7955 GN=syvn1 PE=2 SV=2	[more]
sp\|Q86TM6\|SYVN1_HUMAN	1.4e-68	42.60	E3 ubiquitin-protein ligase synoviolin OS=Homo sapiens OX=9606 GN=SYVN1 PE=1 SV=...	[more]

BLAST of Carg19739 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E231\|A0A1S4E231_CUCME	1.7e-191	98.31	ERAD-associated E3 ubiquitin-protein ligase HRD1B-like OS=Cucumis melo OX=3656 G...	[more]
tr\|A0A0A0LJG4\|A0A0A0LJG4_CUCSA	2.2e-191	98.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G013330 PE=4 SV=1	[more]
tr\|A0A2P4ID24\|A0A2P4ID24_QUESU	1.9e-174	86.63	Erad-associated e3 ubiquitin-protein ligase hrd1a OS=Quercus suber OX=58331 GN=C...	[more]
tr\|A0A2N9J6R5\|A0A2N9J6R5_FAGSY	4.2e-174	87.29	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59933 PE=4 SV=1	[more]
tr\|A0A2P5AY33\|A0A2P5AY33_PARAD	1.0e-172	86.48	E3 ubiquitin-protein ligase synoviolin/Hrd OS=Parasponia andersonii OX=3476 GN=P...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19739-RA	Carg19739-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 320..357 e-value: 2.0E-5 score: 34.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 319..358 e-value: 4.5E-11 score: 42.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 320..358 score: 12.416
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 292..363 e-value: 5.9E-22 score: 78.8
None	No IPR available	PANTHER	PTHR44541	FAMILY NOT NAMED	coord: 29..382
None	No IPR available	CDD	cd16479	RING-H2_synoviolin	coord: 317..358 e-value: 9.58959E-27 score: 99.6799
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 300..364

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19739	ClCG10G009140	Watermelon (Charleston Gray)	carwcgB0286
Carg19739	CmaCh16G002450	Cucurbita maxima (Rimu)	carcmaB0406
Carg19739	CmaCh04G003860	Cucurbita maxima (Rimu)	carcmaB0408
Carg19739	CmoCh16G002830	Cucurbita moschata (Rifu)	carcmoB0402
Carg19739	CmoCh04G004090	Cucurbita moschata (Rifu)	carcmoB0403
Carg19739	Lsi03G009370	Bottle gourd (USVL1VR-Ls)	carlsiB268
Carg19739	Cp4.1LG14g05000	Cucurbita pepo (Zucchini)	carcpeB0407
Carg19739	Cp4.1LG01g03290	Cucurbita pepo (Zucchini)	carcpeB0408
Carg19739	Cla97C10G192310	Watermelon (97103) v2	carwmbB0301

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg19739	Carg08060	Silver-seed gourd	carcarB324

The following block(s) are covering this gene:

None