CmoCh04G004090 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G004090
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(E3 ubiquitin-protein ligase synoviolin) (6.3.2.19)
LocationCmo_Chr04 : 2024454 .. 2030582 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCCATCTTGGTTCTGCATCAGCTTTCATGATTCTGCAATTTTTCGTGTTCGTCTCATCTTCATCGACCTCCAACTGGATTGCCGCCTAGATCTACCCGGGCATAGATAGCCATAGTCGCCGATCAAACAGGCAAGATTTCAATTCGAAAAACAACTTTTTTTTTGTTGATGTTTGTGGATTTGCTCGGTCAATTGGGTTGTAACACCAAGATTACGGGTTTCTGGTTTACCAAGTTTAGTCAGACCATGTTGCAAATACATTACATTGTCCGCGTCGAGACAGAACAAATGTTAGCGCTGGAAAAATTGTAGGAAAATGCCTCTCCCGGCTGGTGTTATTGAATGTAGGGATGGTATTGATGAACTCAACATAGATCATAGGGAATTAATTCACTTCCGCAAACCTTAGGATGATTAATCTCAGTCGAATTTGCATGCATTTGTCGCGTGGATAAGACAAAACAGCGTGTATTTTGCCTGATTTTCTAATGATCAGTGCTTTTGGGCTTTGAGTGGGAATTGGGACCTGGAACTTTTTGGCATTATGTAAACGGAGGGAACCGGGTTGCTAAAATGGGTACATCTCATTCGTAAAGCTTCCTATATTTTATAGTTAAACTCATAGAGCTTTGACCTAGAGCTTGGGTTGGCCTCCATCTCCCTTTTTATTGGCCATCTTTTGGAAAATTCGATGGTGTATTAGAAATCTGAACATCTTAATTTATTAACTTCACATTGCCAAATCAATTATAATTCTCTTTTTGGGGAACCTAAGGGAGCCTTTGAAGCATTTAAAATTGAATTTTTCCCTCAAGCTACGAGGATCTCCCAGGAAGCATTGCATAAATATGCACACGATATGGGGGATGCAGAGGTCTCAAGTTCACTTATCTTCAATAATCTAGAAAGAGATTACATGAAGAGTTATCAAATATTGGAATTAAGCATAAAATGGACGTCACTCTAGTTTTTAGACCAGGACGTCCATGAGAAACCAGAAAATGAAGTTTCCTATAGAAGATCTTCATCATTGAAAATTCCCCTATTTCCCCCAGCCAACCCGGAAAAGCTCGGATTGCTTGGACAAGGAAAATCCTCACATTCATGAAAGGCTTTTTATGCATTACTTCTTAATTTAAATGTCGTCCATACAGATAATCAATTTACTATAAAGATAGGCAACAATGATATTTTAGCATCGATATGTTGTTTCATTTGGCTGACATTTCTAATTCTCACATGGCAGTGCAGTAGAGAATGATGAAGCTGCAAACATATGCGGGAATTAGTTTCATTGCAACTATAGTGGTGATATATCATGCCTTTAACAGTAGAGGCCAGTTCTACCCAGCGTTGGTCTATTTATCAACTTCCAAGATCAATCTAGTGCTTCTTCTCAACATGGGTTTAGTCCTCATGTGCATTTTGTGGCAGCTAACCAAAAAAATATTTCTTGGTTCTCTCCGAGAAGCAGAGGTTGAGAGGCTCAATGAGCAATCGTGGAAGGAATTGATGGAAATCCTCTTTGCCATCACTATCTTTCGGCAAGATTTTTCTGTTGCATTCCTTGCTATGGTTACGGCTTTGTTGTTGATCAAAGCTTTGCATTGGTTGGCTCAGAAGAGGGTTGAATACATGGAAACCACTCCATCGGTGCCGTTGTTGTCTCATATCCGGATTGTTTCTTTCTTGGGTTTTCTCTTTGTTCTAGATAGTCTGTTTTTGTATAATTCGATAGGTTCTCTGATACAGACAAGGAAGGCTTCAGTTTCCCTCTTCTTTTCATTTGAGTAAGTTGGCAATTTCAACCGTATGGTATATAACTTGCATCTGTCTTTGTACAAGCATAAACTATGATGTTTTGTGGTTAGAATGTCAAATATTTCAAGGCCATGTTAGAAGAACTAACAAATTATTTTTAAATTGGATATTTAATATCGTATATAGAGAATTCATGACTACTGTCTTTTTGTTTTTTTCTTGCTGGAGTTAGATCTTTTAAATATCCTATGATGTTTGTTTCTGGATCTCTGAGGATATTTTGTCATCATTAAATAAAGTCAAGGACTTGCTTTTCAGGTATATGATTCTTGCGACAACAGCCGTGTCAACATTTGTGAAATATATTTTCTATGTCAGTGATGTGCTCATGGAGGGACAATGGGAAAAAAAGCCTGTCTATACATTCTACTTGGAGCTTATCCGAGACTTGCTTCACTTGTCGATGTACTTGTGTTTCTTTCTTGTGATTTTCATGTAAGTAATCAAGCTACATTTCCTAAGCCTATCTCATTTGTGTGAATTGGAAGTTTGAATTAATCCCTTTCTGTAAAGATTTACTCATATTGCTTAAGCCCAAATGTCAAAGTAGGAGGATGCTGGTTTTTCTCAAAGAATATTATGCAAACTATAATAATCATGTGGTAACTGGGATTTGTGCCCTTAATATTGGCTGTCAGATTTTACTTTCATGTTAATTATGAGAGATGGCTCACAGGAGTGTCTTATGACTGACATGGTATTTGTTGATTGTTTTGATATCCTTTACATCCTTATTATTTTCAATCTGTTGTTCTTATTTCCCTTTTAGATAGAAAGAGGCAGAGCTTTCTGCTTTCATGCACACATTGCCACTAGAAAAAAGATGCTTTTGATTGTAGTCTTACGAATTGTTTTTTTTTGGAGTTTTTTGGATAAGAGCTCTGTGGTCATGATTTCATTGATAGACTGTAAACACAGAAAGATATTCATTTCACTAACACGGTTCCGTTTTGGACTTTCAACTATCTGTTCTCTCCTTTCTACTATATTGAATGCCAACTGCTTAACACATTTAACGATATAAGGAGGTTAAATGAAGCTCCAGATTAAGTGTATTATGCAAATTTCTTGACTTAAATATGCTGGTATTTAATATACGTTTAATAGTTTAAAATGCACGGTTTTATATCCTCTATTATTCTATCTTCACTGTATTTGCTCTTTATTAACTTCATTCTCTTTTCTCATTTTAATAATGCTGAGTTTGCTCTTGTAGGACATATGGCGTGCCTTTGCACTTGATCCGTGAGCTCTATGAGATCTTTAGGAATTTTAGGATTCGTATTGCAGATTACATTCGGTATAGAAAGATTACTTCAAACATGAATGATCGTTTTCCAGATGCAACACCTGAAGAACTCAATTCGTGCGTCTAAGCTTGGTCAACTTATTATGTCTATTATGTTTCCAATATTTATATTTCAGCTACTAAAATTCATTTTACGGAATTGCAGAAGTGATGCAACATGCATTATTTGTCGTGAAGAGATGACAGTTGCAAAGAAACTAGTATGTGGACATCTTTTTCATGTCCATTGCCTCCGGTCCTGGTTGGAGCGACAACATACTTGTCCCACTTGCAGAGCCCTTGTTGTACCACCTGAAGGTTCAAGCACAGCAGGAGGTCATCAGGGATTGCAGTCTGATGCTAACCTACAAGGTAATTGTGAAGAATTTAGTTTAATTTACTGCTTGGCTAAAAGATCTTAGATCTTGTGCAATTTTTAATTTGATAAATTTGTTCAATCTCTTCAATCACCATGAATTGACCAAGCCTTTCAATATGTACTTGGAGGGAATAGACTCAAGTCATGGTGGCCACCAACCTAAGTTTTAATGCTCACCAGTTTCTTAGGAAACCGAAGGTAGTAGGTCAGACTATTGTCTCGTGAGATTAGTCAGTTAGTGTGTGCAAGTTGGTTTGGACAATCGGGATATCAAAAAAAAAAAAAAAAAAAACTGATCTCTTCCATTTATATATTTCATCTAGTGATGGATTTGTTTGGAATCTTTCGTTTTCCTCAAAATTTCAACTAAGGAAGAAAAGCATGAAAGATCTGGAAGACACTTTTTCTTGAAGTATCAAAGCTAAAAGAGTACTCTTTGTTATTGCTTATGTTACATTCAGATACCTAGAGACATATCTGTCCCATCTGCCACGTCACCTACAAATTAGATAGTGCACAAATTTTCTGGTATTTTACTTGTACAGTGCTTCCCTGCATCTCAAATCTCTTAACGAGTGGTGCTTTTTATACAGCATCCACAACCCAATTTGGTTCAACGGTTCAAAACTATTAAATAATCCGGGTCATTAAGTAACAATGCAAAAATGAGCCATCAGTATTTGCAAGTCTTCTCTATACGTAGTATATACCTCACCATCAGGGTGAAAGAGTTGAAGTTTTGGTCTCTCACAATTCATTTCATGGGTGTTGAATTTCTTTCTTCTCTCATCTTTTTTCTTATTTTTTTTTGAATTCATGCATTATATTCGTGCTTGTTTTTATTAAGAGACTGTCCTTAAAGCTATCAAATATTCTATATATTTTTGTGTCCTAGCAATTCAAACTCGTCTAAAGGAAGTAGTTTGATTCTAGGAATGTCTACGAATTTAAGCACATCTCTTTGAGAACAGATGATCATTCTCGAACTAGACCTCTGGTTCTCTGTAAAAATTGGGTGCTTCATTTTATCTTTTCTTGTTTTGTTTTTAATTTTCTTATTGTCAGAAATGCTGTGGGTGTATTTCCAAGTTTTCCATTGAAATTCTGAAAAGCCTTTTCTCCACCTAAATCACTGTTTGGAGTCTTTTACTCGATCTCATTGCTTTGGATTAACTGCATTAACTGCATTAACTGCTTGATTGTTTGGTGCATGCCAGTAGAGCATTCTTTTCAGTGTATCTGCTTTCTTTGATAGAAGTTTTGGATGCGAATTATGGAACTGTTGGTTTCATTTAATTATTTTTTCAATATGGTAGTCTACCAGGCTGAAACTTGGATGTAATGACTGACCATTCTGTTGGAAACAGGAACAGGAACCACAAGTTCGTCTGCACAAGGTTCGGGTGGTACAAGTGCTGCGGGTGATAGTTTGGGTCATCATCAGGCTAGAGTCCAGGCTGCTGCTGCTGCTGCTTCAATATATGAGAAATCTTATGTTTATCCTTTTGGGAACACATTAGCATGGTATAGCTTTTTATTGCAAAATATGTGGTCCCTGTCTAATTCTCCTTTTTTTGGTCTTGAAAATTTACTTCAATATTAAGGCCATTTCTCCCCTTGTATATAACAGCCCTCCACCCCAAAGAGAGAGAAAAGAGTATGACATATATATATTATATAATTTATATTTTGTTTAATTTTATTTATTTCTAGGTCTCCTGGATATGCAGTAATTCCTCAGGTTCAAAGACCTTTGCTTGACTCCAACAATGTAGAACCGATTGGAGAACAAGCTCCCAATGAACAAGCACAATATTTTCCATTTACAGGCGGCCCTGCAAACCTGTCCTTTACTCAAATCCCCCAAAATCTTTTTATTCCTTTTCAGCCACGAGAGGGCACTGTAAACAATACGGATGGATTGGGCAGTAGTCAAAATATATCAGGCTCACAGCTTGAATCTCAAGAAAGATTTCTTCAACAACAGATTGAGGTATAATATTTAATTATAGCACGAACATTACCTGGTGAACTGTCTTGTTTAGTTAGTGTAGGTTCAGTTTTGGCTCTTGTTGCTGGACCCTTGTATATTCTTTAGCTCAAGGTGAGGTGATTCAATTAGAGGCTGAGAGGAGCTTGCTTGTATTTTGAAGGAAGAAATAAATAGTTTATCTTGTTTTTAGATCTTTCATTGAGAAAGCGTAAAGTTCTTCACACTGCTTCCAAACAACTCTATATTTTATAGAAACTCGAGGGTAGATAGAAGTGAAGAGGAGTCATAAAATCAAATTGTTAACAAGGAGTATGTGATAAGTGAAGGATATATACCCCGTAAAGAAATAAATTTGTATTTATTGAATTCCATTCACACTAATTTGACCGAGGCTGAGGGTCTTTCTTTAGGAGAGTCCACTTTTTTTTGGCTGAATGACCACTTCCTCTAATATGCAAATTTTCATTTTTGCCAACAGATCCTACAAGATCAGCTGCAACTTCTCCGTAAACTGAAAGTCGAGGAAAGCTCAATAGCAGGCGAGGCAGACAAGAAAGGGAAAAGCATAGCATCATCGTCGCAGTCATCATCTTCATCAGTTTCTGATTCTCATCCACACGGAGAAACGGAAAGGACGGTGGGATAA

mRNA sequence

ATTCCATCTTGGTTCTGCATCAGCTTTCATGATTCTGCAATTTTTCGTGTTCGTCTCATCTTCATCGACCTCCAACTGGATTGCCGCCTAGATCTACCCGGGCATAGATAGCCATAGTCGCCGATCAAACAGTGCAGTAGAGAATGATGAAGCTGCAAACATATGCGGGAATTAGTTTCATTGCAACTATAGTGGTGATATATCATGCCTTTAACAGTAGAGGCCAGTTCTACCCAGCGTTGGTCTATTTATCAACTTCCAAGATCAATCTAGTGCTTCTTCTCAACATGGGTTTAGTCCTCATGTGCATTTTGTGGCAGCTAACCAAAAAAATATTTCTTGGTTCTCTCCGAGAAGCAGAGGTTGAGAGGCTCAATGAGCAATCGTGGAAGGAATTGATGGAAATCCTCTTTGCCATCACTATCTTTCGGCAAGATTTTTCTGTTGCATTCCTTGCTATGGTTACGGCTTTGTTGTTGATCAAAGCTTTGCATTGGTTGGCTCAGAAGAGGGTTGAATACATGGAAACCACTCCATCGGTGCCGTTGTTGTCTCATATCCGGATTGTTTCTTTCTTGGGTTTTCTCTTTGTTCTAGATAGTCTGTTTTTGTATAATTCGATAGGTTCTCTGATACAGACAAGGAAGGCTTCAGTTTCCCTCTTCTTTTCATTTGAGTATATGATTCTTGCGACAACAGCCGTGTCAACATTTGTGAAATATATTTTCTATGTCAGTGATGTGCTCATGGAGGGACAATGGGAAAAAAAGCCTGTCTATACATTCTACTTGGAGCTTATCCGAGACTTGCTTCACTTGTCGATGTACTTGTGTTTCTTTCTTGTGATTTTCATGACATATGGCGTGCCTTTGCACTTGATCCGTGAGCTCTATGAGATCTTTAGGAATTTTAGGATTCGTATTGCAGATTACATTCGGTATAGAAAGATTACTTCAAACATGAATGATCGTTTTCCAGATGCAACACCTGAAGAACTCAATTCAAGTGATGCAACATGCATTATTTGTCGTGAAGAGATGACAGTTGCAAAGAAACTAGTATGTGGACATCTTTTTCATGTCCATTGCCTCCGGTCCTGGTTGGAGCGACAACATACTTGTCCCACTTGCAGAGCCCTTGTTGTACCACCTGAAGGTTCAAGCACAGCAGGAGGTCATCAGGGATTGCAGTCTGATGCTAACCTACAAGGAACAGGAACCACAAGTTCGTCTGCACAAGGTTCGGGTGGTACAAGTGCTGCGGGTGATAGTTTGGGTCATCATCAGGCTAGAGTCCAGGCTGCTGCTGCTGCTGCTTCAATATATGAGAAATCTTATGTTTATCCTTTTGGGAACACATTAGCATGGTATAGCTTTTTATTGCAAAATATGTGGTCCCTGTCTCCTGGATATGCAGTAATTCCTCAGGTTCAAAGACCTTTGCTTGACTCCAACAATGTAGAACCGATTGGAGAACAAGCTCCCAATGAACAAGCACAATATTTTCCATTTACAGGCGGCCCTGCAAACCTGTCCTTTACTCAAATCCCCCAAAATCTTTTTATTCCTTTTCAGCCACGAGAGGGCACTGTAAACAATACGGATGGATTGGGCAGTAGTCAAAATATATCAGGCTCACAGCTTGAATCTCAAGAAAGATTTCTTCAACAACAGATTGAGATCCTACAAGATCAGCTGCAACTTCTCCGTAAACTGAAAGTCGAGGAAAGCTCAATAGCAGGCGAGGCAGACAAGAAAGGGAAAAGCATAGCATCATCGTCGCAGTCATCATCTTCATCAGTTTCTGATTCTCATCCACACGGAGAAACGGAAAGGACGGTGGGATAA

Coding sequence (CDS)

ATGATGAAGCTGCAAACATATGCGGGAATTAGTTTCATTGCAACTATAGTGGTGATATATCATGCCTTTAACAGTAGAGGCCAGTTCTACCCAGCGTTGGTCTATTTATCAACTTCCAAGATCAATCTAGTGCTTCTTCTCAACATGGGTTTAGTCCTCATGTGCATTTTGTGGCAGCTAACCAAAAAAATATTTCTTGGTTCTCTCCGAGAAGCAGAGGTTGAGAGGCTCAATGAGCAATCGTGGAAGGAATTGATGGAAATCCTCTTTGCCATCACTATCTTTCGGCAAGATTTTTCTGTTGCATTCCTTGCTATGGTTACGGCTTTGTTGTTGATCAAAGCTTTGCATTGGTTGGCTCAGAAGAGGGTTGAATACATGGAAACCACTCCATCGGTGCCGTTGTTGTCTCATATCCGGATTGTTTCTTTCTTGGGTTTTCTCTTTGTTCTAGATAGTCTGTTTTTGTATAATTCGATAGGTTCTCTGATACAGACAAGGAAGGCTTCAGTTTCCCTCTTCTTTTCATTTGAGTATATGATTCTTGCGACAACAGCCGTGTCAACATTTGTGAAATATATTTTCTATGTCAGTGATGTGCTCATGGAGGGACAATGGGAAAAAAAGCCTGTCTATACATTCTACTTGGAGCTTATCCGAGACTTGCTTCACTTGTCGATGTACTTGTGTTTCTTTCTTGTGATTTTCATGACATATGGCGTGCCTTTGCACTTGATCCGTGAGCTCTATGAGATCTTTAGGAATTTTAGGATTCGTATTGCAGATTACATTCGGTATAGAAAGATTACTTCAAACATGAATGATCGTTTTCCAGATGCAACACCTGAAGAACTCAATTCAAGTGATGCAACATGCATTATTTGTCGTGAAGAGATGACAGTTGCAAAGAAACTAGTATGTGGACATCTTTTTCATGTCCATTGCCTCCGGTCCTGGTTGGAGCGACAACATACTTGTCCCACTTGCAGAGCCCTTGTTGTACCACCTGAAGGTTCAAGCACAGCAGGAGGTCATCAGGGATTGCAGTCTGATGCTAACCTACAAGGAACAGGAACCACAAGTTCGTCTGCACAAGGTTCGGGTGGTACAAGTGCTGCGGGTGATAGTTTGGGTCATCATCAGGCTAGAGTCCAGGCTGCTGCTGCTGCTGCTTCAATATATGAGAAATCTTATGTTTATCCTTTTGGGAACACATTAGCATGGTATAGCTTTTTATTGCAAAATATGTGGTCCCTGTCTCCTGGATATGCAGTAATTCCTCAGGTTCAAAGACCTTTGCTTGACTCCAACAATGTAGAACCGATTGGAGAACAAGCTCCCAATGAACAAGCACAATATTTTCCATTTACAGGCGGCCCTGCAAACCTGTCCTTTACTCAAATCCCCCAAAATCTTTTTATTCCTTTTCAGCCACGAGAGGGCACTGTAAACAATACGGATGGATTGGGCAGTAGTCAAAATATATCAGGCTCACAGCTTGAATCTCAAGAAAGATTTCTTCAACAACAGATTGAGATCCTACAAGATCAGCTGCAACTTCTCCGTAAACTGAAAGTCGAGGAAAGCTCAATAGCAGGCGAGGCAGACAAGAAAGGGAAAAGCATAGCATCATCGTCGCAGTCATCATCTTCATCAGTTTCTGATTCTCATCCACACGGAGAAACGGAAAGGACGGTGGGATAA
Homology
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BLAST of CmoCh04G004090 vs. Swiss-Prot
Match: HRD1A_ARATH (ERAD-associated E3 ubiquitin-protein ligase HRD1A OS=Arabidopsis thaliana GN=HRD1A PE=2 SV=1)

HSP 1 Score: 595.5 bits (1534), Expect = 6.1e-169
Identity = 315/418 (75.36%), Postives = 359/418 (85.89%), Query Frame = 1 

Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           M++L+TYAG+SF+AT+ VIYHAF+SRGQFYPA VYLSTSKI+LVLLLNM LVLM  LW L
Sbjct: 1   MIRLRTYAGLSFMATLAVIYHAFSSRGQFYPATVYLSTSKISLVLLLNMCLVLMLSLWHL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFS  FL +V  LLLIKALHWLA
Sbjct: 61  VKFVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSSGFLPLVVTLLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSV  LSH RIVSF+GFL ++DSLF+Y+SI  LIQ+R+ASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPSVSKLSHFRIVSFMGFLLLVDSLFMYSSIRHLIQSRQASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT V+ FVKY+FYV+D+LM+GQWEKKPVYTFYLELIRDLLHLSMY+CFF VIFM YG
Sbjct: 181 ILATTTVAIFVKYVFYVTDMLMDGQWEKKPVYTFYLELIRDLLHLSMYICFFFVIFMNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHL+RELYE FRNF+IR++DY+RYRKITSNMNDRFPDATPEEL +SDATCIICREEMT
Sbjct: 241 VPLHLLRELYETFRNFQIRVSDYLRYRKITSNMNDRFPDATPEELTASDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGG-----HQGLQSDANLQ 360
            AKKL+CGHLFHVHCLRSWLERQ TCPTCRALVVPPE +++A       HQG Q      
Sbjct: 301 NAKKLICGHLFHVHCLRSWLERQQTCPTCRALVVPPENATSAAPGQRELHQGSQQ----- 360

Query: 361 GTGTTSSSAQGSGGTSAAG---DSLGHHQARVQAAAAAASIYEKSYVYPFGNTLAWYS 411
             GT+SS  QGS  +S+AG   +SL  H AR+QAAA+AAS+Y KS VYP  NT+AW S
Sbjct: 361 --GTSSSGNQGSEISSSAGVSNNSLSRHHARLQAAASAASVYGKSMVYPSANTVAWSS 411

[Close]
BLAST of CmoCh04G004090 vs. Swiss-Prot
Match: HRD1B_ARATH (ERAD-associated E3 ubiquitin-protein ligase HRD1B OS=Arabidopsis thaliana GN=HRD1B PE=2 SV=1)

HSP 1 Score: 594.7 bits (1532), Expect = 1.0e-168
Identity = 316/442 (71.49%), Postives = 369/442 (83.48%), Query Frame = 1 

Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           M++L+ YAG+S +AT+VVIYHAF+SRGQFYPA VYLSTSKINLV+LLNMGLVLM  LW L
Sbjct: 1   MIQLKVYAGLSTLATLVVIYHAFSSRGQFYPATVYLSTSKINLVVLLNMGLVLMLSLWNL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFSV F+++V  LLLIK LHW+A
Sbjct: 61  VKIVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSVGFISLVVTLLLIKGLHWMA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSV LLSH+RIVSF+ FL +LD L  Y+SI  LIQ+RKAS+S+FF+FEYM
Sbjct: 121 QKRVEYIETTPSVTLLSHVRIVSFMVFLLILDCLLTYSSIQQLIQSRKASMSVFFTFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT VS  VKY FYV+D+L EGQWE KPVYTFYLEL+RDLLHLSMYLCFFL+IFM YG
Sbjct: 181 ILATTTVSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           +PLHLIRELYE FRNF+IR+ DY+RYRKITSNMNDRFPDATPEEL+S+DATCIICREEMT
Sbjct: 241 LPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTAGGHQGLQSDANLQGTGT 360
            AKKLVCGHLFHVHCLRSWLERQ+TCPTCRALVVP E  +STA G++G   ++  QGTGT
Sbjct: 301 SAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQQGTGT 360

Query: 361 TSSSAQGSGGTSAAGDSLGHHQARVQAAAAAASIYEKSYVYP-FGNTLAWYSFLLQNMWS 420
           +SS  QGS  ++AA +++  H+AR QAAA+AASIY +S VYP   NTL W          
Sbjct: 361 SSSDGQGSSVSAAASENMSRHEARFQAAASAASIYGRSIVYPSSANTLVW---------- 420

Query: 421 LSPGYAVIPQ----VQRPLLDS 437
            S G +++PQ     QR  L+S
Sbjct: 421 -SQGNSLLPQTEVEAQRRFLES 431

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BLAST of CmoCh04G004090 vs. Swiss-Prot
Match: HRD1_ORYSJ (ERAD-associated E3 ubiquitin-protein ligase HRD1 OS=Oryza sativa subsp. japonica GN=HRD1 PE=2 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 2.6e-159
Identity = 313/526 (59.51%), Postives = 387/526 (73.57%), Query Frame = 1 

Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           M++LQTYA  S +AT   +Y+AF+SR QFYPA+VYLSTSKI  VLLLN GLV MC+ WQL
Sbjct: 1   MIRLQTYAAFSLMATATAVYYAFSSREQFYPAMVYLSTSKICFVLLLNTGLVAMCVAWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
            K++FLG+LREAEVERLNEQ+W+E++EILFA+TIFRQDFSV+FLAMV ALLL+KALHWLA
Sbjct: 61  VKRLFLGTLREAEVERLNEQAWREVVEILFAVTIFRQDFSVSFLAMVAALLLVKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSVP+LSH RIVSF+ FL V+D LFL NS+ SLI  R+ASV++FFSFEYM
Sbjct: 121 QKRVEYIETTPSVPMLSHARIVSFMLFLLVVDCLFLSNSLRSLIHKREASVAIFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILAT+ VSTFVKYIFYVSD+LMEGQWEKK VYTFYLELI DL+HLS+Y+ FF+ IF+ YG
Sbjct: 181 ILATSTVSTFVKYIFYVSDMLMEGQWEKKAVYTFYLELISDLVHLSLYMLFFIAIFLNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYE FRNFRIRIADY+RYRKITSNMN+RFPDAT +ELN+SDATCIICREEMT
Sbjct: 241 VPLHLIRELYETFRNFRIRIADYVRYRKITSNMNERFPDATADELNASDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTA----GGHQGLQSDANLQG 360
            AKKL+CGHLFHVHCLRSWLERQHTCPTCRA ++PP+   TA    G H G+Q    + G
Sbjct: 301 TAKKLLCGHLFHVHCLRSWLERQHTCPTCRAPILPPDNGRTAARPHGVHPGVQP---VPG 360

Query: 361 TGTTSSSAQGSGGTSAAGDSLGHHQARVQAAAAAASIYEKSYVYPFGNTLAWYSFLLQNM 420
            GT        G   AAG+++   QA+++AAA+AAS+Y +S+ YP  N L  YS      
Sbjct: 361 NGT-------PGSERAAGENISRRQAKLEAAASAASLYGRSFAYPPANNLNRYS------ 420

Query: 421 WSLSPGYAVIPQVQRPLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSFTQIPQNLFIPF 480
                          P   ++N    GE + + Q+     T  P+  +F           
Sbjct: 421 --------------TPPQSTSNGPQSGEASTSNQSPKGHATADPSAPTFY---------- 480

Query: 481 QPREGTVNNTDGLGSSQNISGSQLESQERFLQQQIEILQDQLQLLR 523
               G V++   + +++ +  S  ++ E  ++ QIE+LQ QLQ+ +
Sbjct: 481 --ARGAVSS---VTTTRELESSLQKAYENAIKSQIEMLQIQLQMFQ 481

[Close]
BLAST of CmoCh04G004090 vs. Swiss-Prot
Match: SYVN1_DANRE (E3 ubiquitin-protein ligase synoviolin OS=Danio rerio GN=syvn1 PE=2 SV=2)

HSP 1 Score: 264.6 bits (675), Expect = 2.5e-69
Identity = 143/331 (43.20%), Postives = 203/331 (61.33%), Query Frame = 1 

Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           M++       S   T  V+ HA+  + QFYP +VYL+ S  ++ +L     VL+ +L +L
Sbjct: 1   MVRAALVTATSLALTGAVVAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
            +K+F G LR AE+E L E+SW  + E   A T+FR DFS  F+A+ T LL +K  HWLA
Sbjct: 61  MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           + RV++ME +P++  + H R++S +  L V+D LF+ ++  S+I TR ASV L F FEY 
Sbjct: 121 EDRVDFMERSPNISWVFHFRVLSLMVLLGVMDFLFVNHACHSII-TRGASVQLVFGFEYA 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           IL T  ++TF+KY  +  D+  E  W+ K VY  Y EL    + + +Y+ F  ++   + 
Sbjct: 181 ILMTMVLTTFIKYTLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHT 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEM- 300
            PL  IR +Y   R F+  + D I  R+   NMN  +PDATPE+L ++D  CIICREEM 
Sbjct: 241 FPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQATDNVCIICREEMV 300

Query: 301 TVAKKLVCGHLFHVHCLRSWLERQHTCPTCR 331
           T AKKL C H+FH  CLRSW +RQ TCPTCR
Sbjct: 301 TGAKKLPCNHIFHSSCLRSWFQRQQTCPTCR 330

[Close]
BLAST of CmoCh04G004090 vs. Swiss-Prot
Match: SYVN1_HUMAN (E3 ubiquitin-protein ligase synoviolin OS=Homo sapiens GN=SYVN1 PE=1 SV=2)

HSP 1 Score: 262.3 bits (669), Expect = 1.2e-68
Identity = 143/331 (43.20%), Postives = 200/331 (60.42%), Query Frame = 1 

Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           M +       S   T  V+ HA+  + QFYP +VYL+ S  ++ +L     VL+ +L ++
Sbjct: 1   MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
             K+F G LR AE+E L E+SW  + E   A T+FR DFS  F+A+ T LL +K  HWLA
Sbjct: 61  MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           + RV++ME +P++  L H RIVS +  L +LD LF+ ++  S++ TR ASV L F FEY 
Sbjct: 121 EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSIL-TRGASVQLVFGFEYA 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           IL T  ++ F+KY+ +  D+  E  W+ K VY  Y EL    + + +Y+ F  ++   + 
Sbjct: 181 ILMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHT 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEM- 300
            PL  IR +Y   R F+  + D I  R+   NMN  +PDATPEEL + D  CIICREEM 
Sbjct: 241 FPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMV 300

Query: 301 TVAKKLVCGHLFHVHCLRSWLERQHTCPTCR 331
           T AK+L C H+FH  CLRSW +RQ TCPTCR
Sbjct: 301 TGAKRLPCNHIFHTSCLRSWFQRQQTCPTCR 330

[Close]
BLAST of CmoCh04G004090 vs. TrEMBL
Match: A0A0A0LJG4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G013330 PE=4 SV=1)

HSP 1 Score: 917.1 bits (2369), Expect = 1.0e-263
Identity = 493/568 (86.80%), Postives = 514/568 (90.49%), Query Frame = 1 

Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           MMKLQTYAGISFIATI+VIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMKLQTYAGISFIATIMVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFL MVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLF YNSI SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIDSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANLQGTGTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSST  GH G+QSDAN QGTGTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTTGHHGVQSDANQQGTGTT 360

Query: 361 SSSAQGSGGTSAAGDSLGHHQARVQAAAAAASIYEKSYVYPFGNTLAWYSFLLQNMWSLS 420
           SSSAQG+ GT    D+L HHQARV+AAAAAASIYEKSYVYP  +TL W           S
Sbjct: 361 SSSAQGTSGTGVTNDNLSHHQARVRAAAAAASIYEKSYVYPCASTLVW-----------S 420

Query: 421 PGYAVIPQVQRPLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSFTQIPQNLFIPFQPRE 480
            GYAV+PQV+RPL DSNN E  GEQ+PN   QYF F GGP+NLSFTQ PQN+F+PFQPRE
Sbjct: 421 LGYAVVPQVERPLFDSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPRE 480

Query: 481 GTVNNTDGLGSSQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEESSI-AGEADKKG 540
           GT NN + LGSS N+SGSQLE+QE+FLQQQIE LQ+QLQLLRK KVEESS  A EADKKG
Sbjct: 481 GTGNNIEELGSSLNVSGSQLEAQEKFLQQQIEFLQNQLQLLRKPKVEESSRGASEADKKG 540

Query: 541 KSIA-SSSQSSSSSVSDSHPHGETERTV 567
           KS+A S S S+S S SDSHP GETER V
Sbjct: 541 KSLAISPSSSASLSSSDSHPPGETERAV 557

[Close]
BLAST of CmoCh04G004090 vs. TrEMBL
Match: M5X723_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003806mg PE=4 SV=1)

HSP 1 Score: 744.6 bits (1921), Expect = 9.0e-212
Identity = 407/567 (71.78%), Postives = 467/567 (82.36%), Query Frame = 1 

Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           MM+LQTYAGIS +AT+ +IYHAF+SRGQFYPA+VYLSTSKI+LVLLLNMGLV+MC +WQL
Sbjct: 1   MMRLQTYAGISLVATLAIIYHAFSSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCTMWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
           TKK+FLGSLREAEVERLNEQSW+E+MEILFAITIFRQDFSV+FLAMVTALLLIKALHWLA
Sbjct: 61  TKKLFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVSFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSVP+LSH+RIVSFLGFL V+DSLFLY+SI +LI+T+KASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPSVPMLSHVRIVSFLGFLLVVDSLFLYSSISNLIKTQKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT VSTFVKY+FYVSD+LMEGQWEKKPVYTFY+ELIRDLLHLSMYLCFFLVIFM YG
Sbjct: 181 ILATTTVSTFVKYVFYVSDMLMEGQWEKKPVYTFYVELIRDLLHLSMYLCFFLVIFMYYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYE FRNF+IR+ DYIRYRK+TSNMNDRFPDATPEELN+SDATCIICREEMT
Sbjct: 241 VPLHLIRELYETFRNFKIRLGDYIRYRKLTSNMNDRFPDATPEELNASDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTAGGHQGLQSDANLQGTGT 360
            AKKL+CGHLFHV CLRSWLERQHTCPTCRALV PPE G+ TAGGH+G +SDA+ QGTGT
Sbjct: 301 TAKKLLCGHLFHVPCLRSWLERQHTCPTCRALVEPPENGAGTAGGHRGSRSDAHQQGTGT 360

Query: 361 TSSSAQGSGGTSAAGDSLGHHQARVQAAAAAASIYEKSYVYPFGNTLAWYSFLLQNMWSL 420
           T+     +GG   AGD+L  H+AR++AAAAAASIYEKS+VYP  N L W           
Sbjct: 361 TAQGGGVAGGV--AGDNLSQHEARLRAAAAAASIYEKSHVYPSANRLVW----------- 420

Query: 421 SPGYAVIPQVQRPLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSFTQIPQNLFIPFQPR 480
           SPGY  +PQVQR + DS N E  G   P          GGP+NLS  Q P  +F+PF+  
Sbjct: 421 SPGYVALPQVQRQMADSANTESSGVLHPQ-----LATPGGPSNLSSPQFPHYMFVPFEVP 480

Query: 481 EGTVNNTDGLGSSQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEESSIAGEA---D 540
           +  V   + LG   NI+ SQLE+Q++FLQ QIEILQ+QL+ L+K K +ES   G +   D
Sbjct: 481 D--VAYEERLGGDPNITASQLEAQKKFLQHQIEILQNQLKTLQKPKPKESMDTGPSASLD 540

Query: 541 KKGKSIASSSQSSSSSVSDSHPHGETE 564
            KGK++    +SSSSSVSD   H E E
Sbjct: 541 GKGKNV----ESSSSSVSDCGRHVELE 543

[Close]
BLAST of CmoCh04G004090 vs. TrEMBL
Match: A0A061GUW0_THECC (RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_041140 PE=4 SV=1)

HSP 1 Score: 743.4 bits (1918), Expect = 2.0e-211
Identity = 413/567 (72.84%), Postives = 468/567 (82.54%), Query Frame = 1 

Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           MM+L+TYAG+S +AT+ VIYHAFNSRGQFYPA+VYLSTSKI+LVLLLNMGLV+MC LWQL
Sbjct: 1   MMRLRTYAGLSLVATLAVIYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCTLWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
           TK++FLGSLREAE+ERLNEQSW+E+MEILFAITIFRQDFSV FLAMVTALLLIKALHWLA
Sbjct: 61  TKRVFLGSLREAEIERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSV +LSH+RIVSF+GFL +LD LFLY+SI  LIQTR+ASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPSVSMLSHVRIVSFMGFLLLLDCLFLYSSIKFLIQTRQASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT VSTFVKY+FYVSD+LMEGQWEKK VYTFYLELIRDLLHLSMYLCFFLVIFM YG
Sbjct: 181 ILATTTVSTFVKYVFYVSDMLMEGQWEKKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYE FRNF+IR+ADY+RYRKITSNMNDRFPDATPEELN+SDATCIICREEMT
Sbjct: 241 VPLHLIRELYETFRNFKIRVADYMRYRKITSNMNDRFPDATPEELNASDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTAGGHQGLQSDANLQGTGT 360
            AKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE G+S+AGG  G +SDA+ QG+ +
Sbjct: 301 TAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTSSAGGQHGPRSDAHQQGS-S 360

Query: 361 TSSSAQGSGGTSAAGDSLGHHQARVQAAAAAASIYEKSYVYPFGNTLAWYSFLLQNMWSL 420
           TSS+ QG GG  A  D+L  HQAR+QAAAAAASIYEKSY+YP  NTL W           
Sbjct: 361 TSSATQGPGGDMAT-DNLTQHQARLQAAAAAASIYEKSYIYPSANTLVW----------- 420

Query: 421 SPGYAVIPQVQRPLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSFTQIPQNLFIPFQPR 480
           SPGYAV+PQ   P  DS  VE  GE+    Q Q F   GG ANLSF Q P  +F+PF+  
Sbjct: 421 SPGYAVLPQAYGPSADSTKVESSGERTFIGQ-QQFAIPGGHANLSFPQFPHCVFVPFELP 480

Query: 481 EGTVNNTDGLGSSQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEES---SIAGEAD 540
               N+ +G GS QNI  SQLE+Q + +QQ+IE    QLQLL+K K EES    + G +D
Sbjct: 481 GANGNSGEGSGSYQNIPDSQLEAQ-KIIQQKIE---HQLQLLQKPKTEESMDIGLTGSSD 540

Query: 541 KKGKSIASSSQSSSSSVSDSHPHGETE 564
           +KGK+ A      SSSVS++H +GE E
Sbjct: 541 RKGKATA------SSSVSETH-NGEAE 542

[Close]
BLAST of CmoCh04G004090 vs. TrEMBL
Match: B9S201_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_1324630 PE=4 SV=1)

HSP 1 Score: 737.6 bits (1903), Expect = 1.1e-209
Identity = 404/554 (72.92%), Postives = 457/554 (82.49%), Query Frame = 1 

Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           MM+++TYA +S IATI VIYHAFNSRGQFYPA+VYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMRMRTYASLSLIATIAVIYHAFNSRGQFYPAMVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
           TK++FLGSLREAEVERLNEQSW+E+MEILFAITIFRQDFSV FLAMVTALLLIKALHWLA
Sbjct: 61  TKRVFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTP+VP+LSHIRIVSFLGFL +LDSLFLY+SI  L++TR+ASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPTVPMLSHIRIVSFLGFLLLLDSLFLYSSIKFLLETRQASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT VSTFVKY+FYVSD+LMEGQWE+K VYTFYLELIRDLLHLSMYLCFFLVIFM YG
Sbjct: 181 ILATTTVSTFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYE FRNF+IR+ADYIRYRKITSNMNDRFPDATPEELN+SDATCIICREEMT
Sbjct: 241 VPLHLIRELYETFRNFKIRVADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPP--EGSSTAGGHQGLQSDANLQGTG 360
            AKKL+CGHLFHVHCLRSWLERQHTCPTCRALVVPP     +TAGG  G QS+A+ QGTG
Sbjct: 301 TAKKLLCGHLFHVHCLRSWLERQHTCPTCRALVVPPTQHDINTAGGQHGSQSEAHRQGTG 360

Query: 361 TTSSSAQGSGGTSAAGDSLGHHQARVQAAAAAASIYEKSYVYPFGNTLAWYSFLLQNMWS 420
             +   QGS G   A D+L  HQAR+QAAAAAAS+YEKS+VYP  NTL W          
Sbjct: 361 AANPGTQGSIG-GIADDNLSRHQARIQAAAAAASLYEKSFVYPSANTLVW---------- 420

Query: 421 LSPGYAVIPQVQRPLLDSNNVEPIGEQAPNEQAQYFP-FTGGPANLSFTQIPQNLFIPFQ 480
            SPGYA++PQ QRPL D       GEQA   Q+Q  P F  GP+NL+  Q PQ +F+PFQ
Sbjct: 421 -SPGYALLPQAQRPLADPTG----GEQAFVGQSQPQPAFHAGPSNLTLPQFPQCVFVPFQ 480

Query: 481 PREGTVNNTDGLGSSQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEES---SIAGE 540
               +    + LG   N+   +LE+Q++FLQ QIE+LQ QLQLL + K E+S     A  
Sbjct: 481 VPNDSGAQGERLG---NMPNCELEAQKKFLQYQIEVLQRQLQLLHQPKAEDSIHTDPATS 535

Query: 541 ADKKGKSIASSSQS 549
           +D KGK++ASSS S
Sbjct: 541 SDSKGKAVASSSSS 535

[Close]
BLAST of CmoCh04G004090 vs. TrEMBL
Match: A0A0D2NQS0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G119000 PE=4 SV=1)

HSP 1 Score: 733.4 bits (1892), Expect = 2.1e-208
Identity = 402/554 (72.56%), Postives = 460/554 (83.03%), Query Frame = 1 

Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           MM+L+TYAG+S + T+ VIYHAFNSRGQFYPA+VYLSTSKI+LVLLLNMGLV+MCILWQL
Sbjct: 1   MMRLRTYAGLSLVTTLAVIYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVVMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
           TK++FLGSLREAEVERLNEQSW+E+MEILFAITIFRQ+FSV FLAMVTALLLIKALHWLA
Sbjct: 61  TKRLFLGSLREAEVERLNEQSWREVMEILFAITIFRQEFSVPFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSVP L+H+RI+SFLGFL +LDSLFLY+SI  LIQTR+ASVS+FF+FEYM
Sbjct: 121 QKRVEYIETTPSVPKLAHVRIISFLGFLLLLDSLFLYSSIKFLIQTRQASVSIFFAFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT VSTFVKY+FYVSD+LMEGQWEKK VYTFYLELIRDLLHLSMYLCFFLVIFM YG
Sbjct: 181 ILATTTVSTFVKYVFYVSDMLMEGQWEKKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYE FRNF+IR+ADY+RYRKITSNMNDRFPDATPEEL++SDATCIICREEMT
Sbjct: 241 VPLHLIRELYETFRNFKIRVADYLRYRKITSNMNDRFPDATPEELSASDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTAGGHQGLQSDANLQ-GTG 360
           +AKKL+CGHLFHVHCLRSWLERQHTCPTCRALVVPPE G+S++GG  G  SDA  Q GTG
Sbjct: 301 LAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGASSSGGQHGTWSDAPRQVGTG 360

Query: 361 TTSSSAQGSGGTSAAGDSLGHHQARVQAAAAAASIYEKSYVYPFGNTLAWYSFLLQNMWS 420
           +++SSA    G   A D+L  HQAR+QAAAAAASIYEKSYVYP  NTL W          
Sbjct: 361 SSTSSATQGPGVEMATDNLTPHQARLQAAAAAASIYEKSYVYPSANTLVW---------- 420

Query: 421 LSPGYAVIPQVQRPLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSFTQIPQNLFIPFQ- 480
            SPG  V+P    PL D+  VE  GE +P+   Q F   GG +NL F Q P  +F+PFQ 
Sbjct: 421 -SPGNPVLPGSYAPLADTMKVEHSGE-SPSIGHQQFAIPGGQSNLPFPQFPNCVFVPFQL 480

Query: 481 PREGTVNNTDGLGSSQNISGSQLESQERFLQQQIEILQDQLQLLR--KLKVEESSIAG-- 540
           P     +   G GS+QNIS SQLE+Q++ ++QQIE+LQ QLQLL+  + K EESS  G  
Sbjct: 481 PGANGNSGGGGSGSNQNISDSQLEAQKKIIEQQIEVLQRQLQLLQMHEPKTEESSDIGLT 540

Query: 541 -EADKKGKSIASSS 547
             +D KGK +ASSS
Sbjct: 541 TSSDSKGKGVASSS 542

[Close]
BLAST of CmoCh04G004090 vs. TAIR10
Match: AT3G16090.1 (AT3G16090.1 RING/U-box superfamily protein)

HSP 1 Score: 595.5 bits (1534), Expect = 3.4e-170
Identity = 315/418 (75.36%), Postives = 359/418 (85.89%), Query Frame = 1 

Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           M++L+TYAG+SF+AT+ VIYHAF+SRGQFYPA VYLSTSKI+LVLLLNM LVLM  LW L
Sbjct: 1   MIRLRTYAGLSFMATLAVIYHAFSSRGQFYPATVYLSTSKISLVLLLNMCLVLMLSLWHL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFS  FL +V  LLLIKALHWLA
Sbjct: 61  VKFVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSSGFLPLVVTLLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSV  LSH RIVSF+GFL ++DSLF+Y+SI  LIQ+R+ASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPSVSKLSHFRIVSFMGFLLLVDSLFMYSSIRHLIQSRQASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT V+ FVKY+FYV+D+LM+GQWEKKPVYTFYLELIRDLLHLSMY+CFF VIFM YG
Sbjct: 181 ILATTTVAIFVKYVFYVTDMLMDGQWEKKPVYTFYLELIRDLLHLSMYICFFFVIFMNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHL+RELYE FRNF+IR++DY+RYRKITSNMNDRFPDATPEEL +SDATCIICREEMT
Sbjct: 241 VPLHLLRELYETFRNFQIRVSDYLRYRKITSNMNDRFPDATPEELTASDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGG-----HQGLQSDANLQ 360
            AKKL+CGHLFHVHCLRSWLERQ TCPTCRALVVPPE +++A       HQG Q      
Sbjct: 301 NAKKLICGHLFHVHCLRSWLERQQTCPTCRALVVPPENATSAAPGQRELHQGSQQ----- 360

Query: 361 GTGTTSSSAQGSGGTSAAG---DSLGHHQARVQAAAAAASIYEKSYVYPFGNTLAWYS 411
             GT+SS  QGS  +S+AG   +SL  H AR+QAAA+AAS+Y KS VYP  NT+AW S
Sbjct: 361 --GTSSSGNQGSEISSSAGVSNNSLSRHHARLQAAASAASVYGKSMVYPSANTVAWSS 411

[Close]
BLAST of CmoCh04G004090 vs. TAIR10
Match: AT1G65040.2 (AT1G65040.2 RING/U-box superfamily protein)

HSP 1 Score: 594.7 bits (1532), Expect = 5.8e-170
Identity = 316/442 (71.49%), Postives = 369/442 (83.48%), Query Frame = 1 

Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           M++L+ YAG+S +AT+VVIYHAF+SRGQFYPA VYLSTSKINLV+LLNMGLVLM  LW L
Sbjct: 1   MIQLKVYAGLSTLATLVVIYHAFSSRGQFYPATVYLSTSKINLVVLLNMGLVLMLSLWNL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
            K +FLGSLREAEVERLNEQ+W+ELMEILFAITIFRQDFSV F+++V  LLLIK LHW+A
Sbjct: 61  VKIVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSVGFISLVVTLLLIKGLHWMA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSV LLSH+RIVSF+ FL +LD L  Y+SI  LIQ+RKAS+S+FF+FEYM
Sbjct: 121 QKRVEYIETTPSVTLLSHVRIVSFMVFLLILDCLLTYSSIQQLIQSRKASMSVFFTFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT VS  VKY FYV+D+L EGQWE KPVYTFYLEL+RDLLHLSMYLCFFL+IFM YG
Sbjct: 181 ILATTTVSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           +PLHLIRELYE FRNF+IR+ DY+RYRKITSNMNDRFPDATPEEL+S+DATCIICREEMT
Sbjct: 241 LPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTAGGHQGLQSDANLQGTGT 360
            AKKLVCGHLFHVHCLRSWLERQ+TCPTCRALVVP E  +STA G++G   ++  QGTGT
Sbjct: 301 SAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTASGNRGPHQESLQQGTGT 360

Query: 361 TSSSAQGSGGTSAAGDSLGHHQARVQAAAAAASIYEKSYVYP-FGNTLAWYSFLLQNMWS 420
           +SS  QGS  ++AA +++  H+AR QAAA+AASIY +S VYP   NTL W          
Sbjct: 361 SSSDGQGSSVSAAASENMSRHEARFQAAASAASIYGRSIVYPSSANTLVW---------- 420

Query: 421 LSPGYAVIPQ----VQRPLLDS 437
            S G +++PQ     QR  L+S
Sbjct: 421 -SQGNSLLPQTEVEAQRRFLES 431

[Close]
BLAST of CmoCh04G004090 vs. TAIR10
Match: AT4G25230.1 (AT4G25230.1 RPM1 interacting protein 2)

HSP 1 Score: 97.4 bits (241), Expect = 2.9e-20
Identity = 98/343 (28.57%), Postives = 154/343 (44.90%), Query Frame = 1 

Query: 25  SRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQLTKKIFLGSLREAEVERLNEQSWKE 84
           S G    AL  L  S   + LL N  L +  +L    K +F G L + E ++L E+    
Sbjct: 42  SLGDSEHALELLLGSYFTIALLTNFVLNVYILLVLSLKTLFFGDLYDVETKKLVERLANY 101

Query: 85  L------MEILFAITIFRQDFSVAFLAMVTALLLIKALHWLAQKRVEYMETTPSVPLLSH 144
           +      + ++   TIF+    V +   +T L  +K    LA+ R+E +  +PS    ++
Sbjct: 102 IIYKGTFLPLVIPPTIFQ---GVLWTVWLTVLCTLKMFQALARDRLERLNASPSSTPWTY 161

Query: 145 IRIVSFLGFLFVLD------SLFLYNSIGSLIQTRKASVSLFFSFE----YMILATTAVS 204
            R+ S L  +  +D      SL  YN+IGS +           +FE     +I     + 
Sbjct: 162 FRVYSVLFLVLSVDMFWIKLSLMTYNTIGSAVYLLLLFEPCSIAFETLQALLIHGFQLLD 221

Query: 205 TFVKYIF----------YVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMT 264
            ++ ++           ++  +      E K +    L    D+  L M L  +L I+  
Sbjct: 222 MWINHLAVKNSDCQRSKFIDSMTAGSLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWL 281

Query: 265 YGVPLHLIRELYEIFRNFRI-------RIADYIRYRKITSNMNDRFPDATPEELNSSDAT 324
           +G+  HL+  +  +F N R        RI  YI+ R     ++   PDAT EEL + D  
Sbjct: 282 HGIAFHLVDAV--LFLNIRALLSAILKRIKGYIKLRIALGALHAALPDATSEELRAYDDE 341

Query: 325 CIICREEMTVAKKLVCGHLFHVHCLRSWLER----QHTCPTCR 331
           C ICRE M  AK+L C HLFH+ CLRSWL++     ++CPTCR
Sbjct: 342 CAICREPMAKAKRLHCNHLFHLGCLRSWLDQGLNEVYSCPTCR 379

[Close]
BLAST of CmoCh04G004090 vs. TAIR10
Match: AT5G51450.2 (AT5G51450.2 RPM1 interacting protein 3)

HSP 1 Score: 86.3 bits (212), Expect = 6.7e-17
Identity = 103/375 (27.47%), Postives = 160/375 (42.67%), Query Frame = 1 

Query: 25  SRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQLTKKIFLGSLREAEVERLNEQSWKE 84
           S G     L  L +S   + LL +  L +  +L    K +F G L   E  +L E+    
Sbjct: 42  SLGNSENTLELLLSSHTTIALLASFVLNIYILLVLSLKTLFFGDLYAIETRKLVERLANY 101

Query: 85  L------MEILFAITIFRQDFSVAFLAMVTALLLIKALHWLAQKRVEYMETTPSVPLLSH 144
           +      +  +   T+F+    V +   +T L  +K    LA+ R++ +  +PS    ++
Sbjct: 102 IIYKGTFLPFVVPRTVFQ---GVLWTIWLTVLCTLKMFQALARDRLDRLNASPSSTPWTY 161

Query: 145 IRIVSFLGFLFVLD------SLFLYNSIGSLIQTRKASVSLFFSFEYMILATTAVSTFVK 204
            R+ S L  +   D      SL +YN++GS       SV L   FE   +A   +   + 
Sbjct: 162 FRVYSALFMVLSTDLCWIKLSLMIYNTVGS-------SVYLLLLFEPCGIAFETLQALLI 221

Query: 205 YIFYVSDVLME---------------------GQWEKKPVYTFYLELIRDLLHLSMYLCF 264
           + F + D+ +                         E K +    L    D+  L M L  
Sbjct: 222 HGFQLLDMWINHLAVKNSDCQRSKFYDSMTAGSLLEWKGLLNRNLGFFLDMATLVMALGH 281

Query: 265 FLVIFMTYGVPLHLIRELYEIFRNFRI-------RIADYIRYRKITSNMNDRFPDATPEE 324
           +L I+  +G+  HL+  +  +F N R        RI  YI+ R     ++    DAT EE
Sbjct: 282 YLHIWWLHGMAFHLVDAV--LFLNIRALLSSILKRIKGYIKLRVALGALHAALLDATSEE 341

Query: 325 LNSSDATCIICREEMTVAKKLVCGHLFHVHCLRSWLER----QHTCPTCRALVVPPEGSS 355
           L   D  C ICRE M  AK+L C HLFH+ CLRSWL++     ++CPTCR  +      S
Sbjct: 342 LRDYDDECAICREPMAKAKRLHCNHLFHLGCLRSWLDQGLNEVYSCPTCRKPLFVGRTES 401

[Close]
BLAST of CmoCh04G004090 vs. TAIR10
Match: AT2G44581.1 (AT2G44581.1 RING/U-box superfamily protein)

HSP 1 Score: 60.5 bits (145), Expect = 4.0e-09
Identity = 33/80 (41.25%), Postives = 43/80 (53.75%), Query Frame = 1 

Query: 265 RYRKITSNMNDRFPDATPEELNSSDATCIICREEMTVAKKL----VCGHLFHVHCLRSWL 324
           RYR  T +   R+   T EE +SS   C IC E  T  +K+     C H FHV C+  WL
Sbjct: 44  RYRTFTVHHRRRWRKTTAEEKHSSPY-CTICLENATEGEKMRRIAACSHCFHVDCIDPWL 103

Query: 325 ERQHTCPTCRALVVP-PEGS 340
           E++  CP CRA + P P G+
Sbjct: 104 EKKSMCPLCRAEIPPVPPGN 122

[Close]
BLAST of CmoCh04G004090 vs. NCBI nr
Match: gi|449442867|ref|XP_004139202.1| (PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B [Cucumis sativus])

HSP 1 Score: 917.1 bits (2369), Expect = 1.5e-263
Identity = 493/568 (86.80%), Postives = 514/568 (90.49%), Query Frame = 1 

Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           MMKLQTYAGISFIATI+VIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMKLQTYAGISFIATIMVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFL MVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLF YNSI SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIDSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANLQGTGTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSST  GH G+QSDAN QGTGTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTTGHHGVQSDANQQGTGTT 360

Query: 361 SSSAQGSGGTSAAGDSLGHHQARVQAAAAAASIYEKSYVYPFGNTLAWYSFLLQNMWSLS 420
           SSSAQG+ GT    D+L HHQARV+AAAAAASIYEKSYVYP  +TL W           S
Sbjct: 361 SSSAQGTSGTGVTNDNLSHHQARVRAAAAAASIYEKSYVYPCASTLVW-----------S 420

Query: 421 PGYAVIPQVQRPLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSFTQIPQNLFIPFQPRE 480
            GYAV+PQV+RPL DSNN E  GEQ+PN   QYF F GGP+NLSFTQ PQN+F+PFQPRE
Sbjct: 421 LGYAVVPQVERPLFDSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPRE 480

Query: 481 GTVNNTDGLGSSQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEESSI-AGEADKKG 540
           GT NN + LGSS N+SGSQLE+QE+FLQQQIE LQ+QLQLLRK KVEESS  A EADKKG
Sbjct: 481 GTGNNIEELGSSLNVSGSQLEAQEKFLQQQIEFLQNQLQLLRKPKVEESSRGASEADKKG 540

Query: 541 KSIA-SSSQSSSSSVSDSHPHGETERTV 567
           KS+A S S S+S S SDSHP GETER V
Sbjct: 541 KSLAISPSSSASLSSSDSHPPGETERAV 557

[Close]
BLAST of CmoCh04G004090 vs. NCBI nr
Match: gi|659070498|ref|XP_008455400.1| (PREDICTED: E3 ubiquitin-protein ligase synoviolin-like [Cucumis melo])

HSP 1 Score: 912.9 bits (2358), Expect = 2.7e-262
Identity = 491/568 (86.44%), Postives = 512/568 (90.14%), Query Frame = 1 

Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           MMKLQTYAGISFIATI+VIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLV+MCILWQL
Sbjct: 1   MMKLQTYAGISFIATIMVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVIMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
           TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFL MVTALLLIKALHWLA
Sbjct: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLGMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLF YNSI SLIQTRKASVSLFFSFEYM
Sbjct: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFFYNSIDSLIQTRKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATTAVSTFVKYIFYVSDVLMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTAVSTFVKYIFYVSDVLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT
Sbjct: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTAGGHQGLQSDANLQGTGTT 360
           VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSST  GH G+QSDAN QGTGTT
Sbjct: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPEGSSTTSGHHGVQSDANQQGTGTT 360

Query: 361 SSSAQGSGGTSAAGDSLGHHQARVQAAAAAASIYEKSYVYPFGNTLAWYSFLLQNMWSLS 420
           SSSAQG+ GT     +L HHQARV+AAAAAASIYEKSYVYP  +TL W           S
Sbjct: 361 SSSAQGTSGTGVTNANLSHHQARVRAAAAAASIYEKSYVYPCASTLVW-----------S 420

Query: 421 PGYAVIPQVQRPLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSFTQIPQNLFIPFQPRE 480
            GYAV+PQV+RPL DSNN E  GEQ+PN   QYF F GGP+NLSFTQ PQN+F+PFQPRE
Sbjct: 421 LGYAVVPQVERPLFDSNNTETNGEQSPNGHPQYFSFPGGPSNLSFTQFPQNIFVPFQPRE 480

Query: 481 GTVNNTDGLGSSQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEESSI-AGEADKKG 540
           GT NN + LGSS N+SGSQLE+QE+FLQQQIE LQ+QLQLLRK KVEESS  A E DKKG
Sbjct: 481 GTGNNIEELGSSLNVSGSQLEAQEKFLQQQIEFLQNQLQLLRKPKVEESSRGASETDKKG 540

Query: 541 KSIA-SSSQSSSSSVSDSHPHGETERTV 567
           KS+A S S S+S S SDSHP GETER V
Sbjct: 541 KSLAISPSPSASLSSSDSHPPGETERVV 557

[Close]
BLAST of CmoCh04G004090 vs. NCBI nr
Match: gi|1009123461|ref|XP_015878551.1| (PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Ziziphus jujuba])

HSP 1 Score: 747.7 bits (1929), Expect = 1.5e-212
Identity = 406/556 (73.02%), Postives = 464/556 (83.45%), Query Frame = 1 

Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           MM+LQTYAG+SF+ T+ VIYHAFNSRGQFYPA+VYLSTSKI+LVLLLN+GLV+MCILWQL
Sbjct: 1   MMRLQTYAGLSFLGTLAVIYHAFNSRGQFYPAMVYLSTSKISLVLLLNIGLVIMCILWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
           TK+IFLGSLREAEVERLNEQSW+E+MEILFAITIFRQDFSV+FLAMVTALLLIKALHWLA
Sbjct: 61  TKRIFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVSFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSVP+LSHIRIVSFLGFL  LDSLFLY S+  LIQ+RK SVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPSVPMLSHIRIVSFLGFLLALDSLFLYTSVNDLIQSRKPSVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT VSTFVKY+FYVSD+LMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG
Sbjct: 181 ILATTTVSTFVKYVFYVSDMLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYE FRNF+IR+ADY+RYRKITSNMNDRFP+ATPEEL++SDATCIICREEMT
Sbjct: 241 VPLHLIRELYETFRNFKIRVADYVRYRKITSNMNDRFPEATPEELDASDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTAGGHQGLQSDANLQGTGT 360
            AKKL+CGHLFHVHCLRSWLERQHTCPTCRALVVPPE G+STAGG  G +SD++ QGTG 
Sbjct: 301 TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTSTAGGQNGSRSDSH-QGTGI 360

Query: 361 TSSSAQGSGGTSAAGDSLGHHQARVQAAAAAASIYEKSYVYPFGNTLAWYSFLLQNMWSL 420
           + +S QGS G   A D++  HQAR+QAAAAAASIYEKSYVYP  NTL W           
Sbjct: 361 SGTSGQGSVG-GVASDNVSLHQARLQAAAAAASIYEKSYVYPSANTLVW----------- 420

Query: 421 SPGYAVIPQVQRPLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSFTQIPQNLFIPFQPR 480
           SPGYAV+PQ Q PL +S + E  G+     Q Q+ P  GGPANLS  Q PQ + +PFQ  
Sbjct: 421 SPGYAVLPQTQIPLANSASNESGGQ----SQRQFVP-PGGPANLSTPQFPQYILVPFQAS 480

Query: 481 EGTVNNTDGLGSSQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEES---SIAGEAD 540
           +  + + + L S   +S +Q+++Q + LQ QIE+LQ+QLQLL++ K E+S         D
Sbjct: 481 KTNLTDEEKLNSDPKVSDTQMDAQRQLLQHQIEVLQNQLQLLQRSKTEQSREIDPTKSLD 538

Query: 541 KKGKSIASSSQSSSSS 553
            K K IASSS ++S S
Sbjct: 541 NKEKGIASSSSNASDS 538

[Close]
BLAST of CmoCh04G004090 vs. NCBI nr
Match: gi|596051917|ref|XP_007220658.1| (hypothetical protein PRUPE_ppa003806mg [Prunus persica])

HSP 1 Score: 744.6 bits (1921), Expect = 1.3e-211
Identity = 407/567 (71.78%), Postives = 467/567 (82.36%), Query Frame = 1 

Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           MM+LQTYAGIS +AT+ +IYHAF+SRGQFYPA+VYLSTSKI+LVLLLNMGLV+MC +WQL
Sbjct: 1   MMRLQTYAGISLVATLAIIYHAFSSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCTMWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
           TKK+FLGSLREAEVERLNEQSW+E+MEILFAITIFRQDFSV+FLAMVTALLLIKALHWLA
Sbjct: 61  TKKLFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVSFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSVP+LSH+RIVSFLGFL V+DSLFLY+SI +LI+T+KASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPSVPMLSHVRIVSFLGFLLVVDSLFLYSSISNLIKTQKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT VSTFVKY+FYVSD+LMEGQWEKKPVYTFY+ELIRDLLHLSMYLCFFLVIFM YG
Sbjct: 181 ILATTTVSTFVKYVFYVSDMLMEGQWEKKPVYTFYVELIRDLLHLSMYLCFFLVIFMYYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYE FRNF+IR+ DYIRYRK+TSNMNDRFPDATPEELN+SDATCIICREEMT
Sbjct: 241 VPLHLIRELYETFRNFKIRLGDYIRYRKLTSNMNDRFPDATPEELNASDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTAGGHQGLQSDANLQGTGT 360
            AKKL+CGHLFHV CLRSWLERQHTCPTCRALV PPE G+ TAGGH+G +SDA+ QGTGT
Sbjct: 301 TAKKLLCGHLFHVPCLRSWLERQHTCPTCRALVEPPENGAGTAGGHRGSRSDAHQQGTGT 360

Query: 361 TSSSAQGSGGTSAAGDSLGHHQARVQAAAAAASIYEKSYVYPFGNTLAWYSFLLQNMWSL 420
           T+     +GG   AGD+L  H+AR++AAAAAASIYEKS+VYP  N L W           
Sbjct: 361 TAQGGGVAGGV--AGDNLSQHEARLRAAAAAASIYEKSHVYPSANRLVW----------- 420

Query: 421 SPGYAVIPQVQRPLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSFTQIPQNLFIPFQPR 480
           SPGY  +PQVQR + DS N E  G   P          GGP+NLS  Q P  +F+PF+  
Sbjct: 421 SPGYVALPQVQRQMADSANTESSGVLHPQ-----LATPGGPSNLSSPQFPHYMFVPFEVP 480

Query: 481 EGTVNNTDGLGSSQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEESSIAGEA---D 540
           +  V   + LG   NI+ SQLE+Q++FLQ QIEILQ+QL+ L+K K +ES   G +   D
Sbjct: 481 D--VAYEERLGGDPNITASQLEAQKKFLQHQIEILQNQLKTLQKPKPKESMDTGPSASLD 540

Query: 541 KKGKSIASSSQSSSSSVSDSHPHGETE 564
            KGK++    +SSSSSVSD   H E E
Sbjct: 541 GKGKNV----ESSSSSVSDCGRHVELE 543

[Close]
BLAST of CmoCh04G004090 vs. NCBI nr
Match: gi|645257794|ref|XP_008234576.1| (PREDICTED: E3 ubiquitin-protein ligase synoviolin-like [Prunus mume])

HSP 1 Score: 743.8 bits (1919), Expect = 2.2e-211
Identity = 407/567 (71.78%), Postives = 467/567 (82.36%), Query Frame = 1 

Query: 1   MMKLQTYAGISFIATIVVIYHAFNSRGQFYPALVYLSTSKINLVLLLNMGLVLMCILWQL 60
           MM+LQTYAGIS +AT+ +IYHAF+SRGQFYPA+V+LSTSKI+LVLLLNMGLV+MC +WQL
Sbjct: 1   MMRLQTYAGISLVATLAIIYHAFSSRGQFYPAMVFLSTSKISLVLLLNMGLVIMCTMWQL 60

Query: 61  TKKIFLGSLREAEVERLNEQSWKELMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA 120
           TKK+FLGSLREAEVERLNEQSW+E+MEILFAITIFRQDFSV+FLAMVTALLLIKALHWLA
Sbjct: 61  TKKLFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVSFLAMVTALLLIKALHWLA 120

Query: 121 QKRVEYMETTPSVPLLSHIRIVSFLGFLFVLDSLFLYNSIGSLIQTRKASVSLFFSFEYM 180
           QKRVEY+ETTPSVP+LSH+RIVSFLGFL V+DSLFLY+SI +LI+T+KASVSLFFSFEYM
Sbjct: 121 QKRVEYIETTPSVPMLSHVRIVSFLGFLLVVDSLFLYSSISNLIKTQKASVSLFFSFEYM 180

Query: 181 ILATTAVSTFVKYIFYVSDVLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLVIFMTYG 240
           ILATT VSTFVKY+FYVSD+LMEGQWE+KPVYTFYLELIRDLLHLSMYLCFFLVIFM YG
Sbjct: 181 ILATTTVSTFVKYVFYVSDMLMEGQWERKPVYTFYLELIRDLLHLSMYLCFFLVIFMYYG 240

Query: 241 VPLHLIRELYEIFRNFRIRIADYIRYRKITSNMNDRFPDATPEELNSSDATCIICREEMT 300
           VPLHLIRELYE FRNF+IR+ADY+RYRK+TSNMNDRFPDATPEELN+SDATCIICREEMT
Sbjct: 241 VPLHLIRELYETFRNFKIRVADYVRYRKLTSNMNDRFPDATPEELNASDATCIICREEMT 300

Query: 301 VAKKLVCGHLFHVHCLRSWLERQHTCPTCRALVVPPE-GSSTAGGHQGLQSDANLQGTGT 360
            AKKL+CGHLFHV CLRSWLERQHTCPTCRALVVPPE G+ TAGGH+G +SDA+ QGTGT
Sbjct: 301 TAKKLLCGHLFHVPCLRSWLERQHTCPTCRALVVPPENGAGTAGGHRGSRSDAHQQGTGT 360

Query: 361 TSSSAQGSGGTSAAGDSLGHHQARVQAAAAAASIYEKSYVYPFGNTLAWYSFLLQNMWSL 420
           T   AQG G    AGD+L  H+AR++AAAAAASIYEKS+VYP  N L W           
Sbjct: 361 T---AQGGG---VAGDNLSQHEARLRAAAAAASIYEKSHVYPSANRLVW----------- 420

Query: 421 SPGYAVIPQVQRPLLDSNNVEPIGEQAPNEQAQYFPFTGGPANLSFTQIPQNLFIPFQPR 480
           SPGY  +PQVQR + D+ N E  G              GGP+NLS  Q P  +F+PF+  
Sbjct: 421 SPGYVALPQVQRQMADAANTESSG-----VSHSQLATPGGPSNLSSPQFPHYMFVPFEVP 480

Query: 481 EGTVNNTDGLGSSQNISGSQLESQERFLQQQIEILQDQLQLLRKLKVEESSIAGEA---D 540
           +  V   + LG   NI+ SQLE+Q++FLQ QIEILQ+Q Q L+K K +ES   G +   D
Sbjct: 481 D--VAYEERLGGDPNITASQLEAQKKFLQHQIEILQNQFQTLQKPKPKESMDTGPSASLD 539

Query: 541 KKGKSIASSSQSSSSSVSDSHPHGETE 564
            KGK++    +SSSSSVSD   H E E
Sbjct: 541 GKGKNV----ESSSSSVSDCGRHVELE 539

The following BLAST results are available for this feature:
BLAST of CmoCh04G004090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HRD1A_ARATH6.1e-16975.36ERAD-associated E3 ubiquitin-protein ligase HRD1A OS=Arabidopsis thaliana GN=HRD... [more]
HRD1B_ARATH1.0e-16871.49ERAD-associated E3 ubiquitin-protein ligase HRD1B OS=Arabidopsis thaliana GN=HRD... [more]
HRD1_ORYSJ2.6e-15959.51ERAD-associated E3 ubiquitin-protein ligase HRD1 OS=Oryza sativa subsp. japonica... [more]
SYVN1_DANRE2.5e-6943.20E3 ubiquitin-protein ligase synoviolin OS=Danio rerio GN=syvn1 PE=2 SV=2[more]
SYVN1_HUMAN1.2e-6843.20E3 ubiquitin-protein ligase synoviolin OS=Homo sapiens GN=SYVN1 PE=1 SV=2[more]
BLAST of CmoCh04G004090 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJG4_CUCSA1.0e-26386.80Uncharacterized protein OS=Cucumis sativus GN=Csa_2G013330 PE=4 SV=1[more]
M5X723_PRUPE9.0e-21271.78Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003806mg PE=4 SV=1[more]
A0A061GUW0_THECC2.0e-21172.84RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_041140 PE=4 SV=1[more]
B9S201_RICCO1.1e-20972.92Protein binding protein, putative OS=Ricinus communis GN=RCOM_1324630 PE=4 SV=1[more]
A0A0D2NQS0_GOSRA2.1e-20872.56Uncharacterized protein OS=Gossypium raimondii GN=B456_006G119000 PE=4 SV=1[more]
BLAST of CmoCh04G004090 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G16090.13.4e-17075.36 RING/U-box superfamily protein[more]
AT1G65040.25.8e-17071.49 RING/U-box superfamily protein[more]
AT4G25230.12.9e-2028.57 RPM1 interacting protein 2[more]
AT5G51450.26.7e-1727.47 RPM1 interacting protein 3[more]
AT2G44581.14.0e-0941.25 RING/U-box superfamily protein[more]
BLAST of CmoCh04G004090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449442867|ref|XP_004139202.1|1.5e-26386.80PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B [Cucumis sativus][more]
gi|659070498|ref|XP_008455400.1|2.7e-26286.44PREDICTED: E3 ubiquitin-protein ligase synoviolin-like [Cucumis melo][more]
gi|1009123461|ref|XP_015878551.1|1.5e-21273.02PREDICTED: ERAD-associated E3 ubiquitin-protein ligase HRD1B-like [Ziziphus juju... [more]
gi|596051917|ref|XP_007220658.1|1.3e-21171.78hypothetical protein PRUPE_ppa003806mg [Prunus persica][more]
gi|645257794|ref|XP_008234576.1|2.2e-21171.78PREDICTED: E3 ubiquitin-protein ligase synoviolin-like [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Cellular Component
TermDefinition
GO:0000836Hrd1p ubiquitin ligase complex
Vocabulary: Biological Process
TermDefinition
GO:0016567protein ubiquitination
GO:0030433ER-associated ubiquitin-dependent protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0061630ubiquitin protein ligase activity
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030433 ER-associated ubiquitin-dependent protein catabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0008150 biological_process
biological_process GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway
biological_process GO:0016567 protein ubiquitination
biological_process GO:0018108 peptidyl-tyrosine phosphorylation
biological_process GO:0009069 serine family amino acid metabolic process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0000836 Hrd1p ubiquitin ligase complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0061630 ubiquitin protein ligase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0032440 2-alkenal reductase [NAD(P)] activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0004714 transmembrane receptor protein tyrosine kinase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G004090.1CmoCh04G004090.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 291..330
score: 7.5
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 292..329
score: 2.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 292..330
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 280..333
score: 3.3
NoneNo IPR availableunknownCoilCoilcoord: 497..524
scor
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 507..556
score: 6.1E-165coord: 1..368
score: 6.1E
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 272..336
score: 4.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G004090CmaCh16G002450Cucurbita maxima (Rimu)cmacmoB338
CmoCh04G004090CmaCh04G003860Cucurbita maxima (Rimu)cmacmoB728
CmoCh04G004090Cla001113Watermelon (97103) v1cmowmB654
CmoCh04G004090ClCG10G009140Watermelon (Charleston Gray)cmowcgB610
CmoCh04G004090Lsi03G009370Bottle gourd (USVL1VR-Ls)cmolsiB646
CmoCh04G004090Cp4.1LG01g03290Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G004090Cp4.1LG14g05000Cucurbita pepo (Zucchini)cmocpeB671
CmoCh04G004090Cla97C10G192310Watermelon (97103) v2cmowmbB684
CmoCh04G004090Carg19739Silver-seed gourdcarcmoB0403
CmoCh04G004090Carg08060Silver-seed gourdcarcmoB0514
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh04G004090CmoCh16G002830Cucurbita moschata (Rifu)cmocmoB289
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G004090Wild cucumber (PI 183967)cmocpiB708
CmoCh04G004090Wild cucumber (PI 183967)cmocpiB710
CmoCh04G004090Wild cucumber (PI 183967)cmocpiB720
CmoCh04G004090Cucumber (Chinese Long) v2cmocuB700
CmoCh04G004090Cucumber (Chinese Long) v2cmocuB702
CmoCh04G004090Cucumber (Chinese Long) v2cmocuB710
CmoCh04G004090Melon (DHL92) v3.5.1cmomeB694
CmoCh04G004090Melon (DHL92) v3.5.1cmomeB696
CmoCh04G004090Cucurbita pepo (Zucchini)cmocpeB668
CmoCh04G004090Cucumber (Gy14) v2cgybcmoB516
CmoCh04G004090Cucumber (Gy14) v2cgybcmoB518
CmoCh04G004090Cucumber (Gy14) v2cgybcmoB528
CmoCh04G004090Melon (DHL92) v3.6.1cmomedB788
CmoCh04G004090Melon (DHL92) v3.6.1cmomedB790
CmoCh04G004090Silver-seed gourdcarcmoB1177
CmoCh04G004090Cucumber (Chinese Long) v3cmocucB0830
CmoCh04G004090Cucumber (Chinese Long) v3cmocucB0841
CmoCh04G004090Watermelon (97103) v2cmowmbB749
CmoCh04G004090Wax gourdcmowgoB0810
CmoCh04G004090Cucurbita moschata (Rifu)cmocmoB286
CmoCh04G004090Cucumber (Gy14) v1cgycmoB0197
CmoCh04G004090Cucumber (Gy14) v1cgycmoB1101