CmoCh16G000190 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh16G000190
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	WD40 repeat protein
Location	Cmo_Chr16 : 107077 .. 108096 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAACGCCGCCCCAAGATCCGAATTCATGGCCACCTACGATTCCCCGCACCCTCTCTATGCCATGGCCATCTCTTCCGCCCACACCCACTCTCGCACTTTCCCCAATCGCATAGCCCTTGGTAGCTTCATCGAACAGTGCACCAACCGTGTCGACATTGTGTCTTTTGATCCAGATTCCCTCTCCATTCAAACGCATCCTTCTCTCTCCTTCGACCACCCCTACCCACCCACCAAGCTCATGTTCAATCCCGATGCCCTCTCCTCTCTCCGCAACTCCTCCGACATCTTGGCCTCCTCCGGCGACTATCTCCGCCTCTGGCAAGTTGGAGATTCTTCTATCGAACCCCTCTCTGTCCTCAACAACAGCAAAACCAGTGAATTCTGCGCCCCCTTAACTTCCTTCGACTGGAATGAAGTCGAGCCCAAGAGAATTGGAACCTCCAGCATTGATACCACTTGCACTATTTGGGATATTGAGAAGAGCGTGGTTGAAACCCAGTTCATAGCTCACGACAAAGAGGTTTATGACATTGCGTGGGGGGAAGCCCGAGTTTTTGCCTCCGTTTCCGCTGATGGGTCGGTCAGGATTTTCGACTTGAGAGATAAAGAGCACTCCACCATTATATACGAAAGCCCCCAACCCGATACCCCTTTGCTTAGACTGGCTTGGAACAAGCAGGACCTGCGGTACATGGCCACAATTTTGATGGACAGCAACAAAGTTGTTATTTTGGACATTCGCTCGCCAAGTGTGCCGGTTGCTGAGCTGGAGAGGCATCATTCCAGTGTCAATGCCATTGCCTGGGCTCCACGGAGCTGCAGACATATTTGCTCCGCTGGGGATGACAAACAGGCGCTTATTTGGGAGTTGCCAATGGTTGCAGGCCCGAATGGCATTGATCCAATGTCCATGTATTCTGCTGCACATGAAATTAACCAGTTGCAGTGGTCCGCCGCCCAGCCTGATTGGATTGCTCTGGCGTTTTCTAACAAGATGCAGCTTTTGAAAGTTTGA

mRNA sequence

ATGGAAAACGCCGCCCCAAGATCCGAATTCATGGCCACCTACGATTCCCCGCACCCTCTCTATGCCATGGCCATCTCTTCCGCCCACACCCACTCTCGCACTTTCCCCAATCGCATAGCCCTTGGTAGCTTCATCGAACAGTGCACCAACCGTGTCGACATTGTGTCTTTTGATCCAGATTCCCTCTCCATTCAAACGCATCCTTCTCTCTCCTTCGACCACCCCTACCCACCCACCAAGCTCATGTTCAATCCCGATGCCCTCTCCTCTCTCCGCAACTCCTCCGACATCTTGGCCTCCTCCGGCGACTATCTCCGCCTCTGGCAAGTTGGAGATTCTTCTATCGAACCCCTCTCTGTCCTCAACAACAGCAAAACCAGTGAATTCTGCGCCCCCTTAACTTCCTTCGACTGGAATGAAGTCGAGCCCAAGAGAATTGGAACCTCCAGCATTGATACCACTTGCACTATTTGGGATATTGAGAAGAGCGTGGTTGAAACCCAGTTCATAGCTCACGACAAAGAGGTTTATGACATTGCGTGGGGGGAAGCCCGAGTTTTTGCCTCCGTTTCCGCTGATGGGTCGGTCAGGATTTTCGACTTGAGAGATAAAGAGCACTCCACCATTATATACGAAAGCCCCCAACCCGATACCCCTTTGCTTAGACTGGCTTGGAACAAGCAGGACCTGCGGTACATGGCCACAATTTTGATGGACAGCAACAAAGTTGTTATTTTGGACATTCGCTCGCCAAGTGTGCCGGTTGCTGAGCTGGAGAGGCATCATTCCAGTGTCAATGCCATTGCCTGGGCTCCACGGAGCTGCAGACATATTTGCTCCGCTGGGGATGACAAACAGGCGCTTATTTGGGAGTTGCCAATGGTTGCAGGCCCGAATGGCATTGATCCAATGTCCATGTATTCTGCTGCACATGAAATTAACCAGTTGCAGTGGTCCGCCGCCCAGCCTGATTGGATTGCTCTGGCGTTTTCTAACAAGATGCAGCTTTTGAAAGTTTGA

Coding sequence (CDS)

ATGGAAAACGCCGCCCCAAGATCCGAATTCATGGCCACCTACGATTCCCCGCACCCTCTCTATGCCATGGCCATCTCTTCCGCCCACACCCACTCTCGCACTTTCCCCAATCGCATAGCCCTTGGTAGCTTCATCGAACAGTGCACCAACCGTGTCGACATTGTGTCTTTTGATCCAGATTCCCTCTCCATTCAAACGCATCCTTCTCTCTCCTTCGACCACCCCTACCCACCCACCAAGCTCATGTTCAATCCCGATGCCCTCTCCTCTCTCCGCAACTCCTCCGACATCTTGGCCTCCTCCGGCGACTATCTCCGCCTCTGGCAAGTTGGAGATTCTTCTATCGAACCCCTCTCTGTCCTCAACAACAGCAAAACCAGTGAATTCTGCGCCCCCTTAACTTCCTTCGACTGGAATGAAGTCGAGCCCAAGAGAATTGGAACCTCCAGCATTGATACCACTTGCACTATTTGGGATATTGAGAAGAGCGTGGTTGAAACCCAGTTCATAGCTCACGACAAAGAGGTTTATGACATTGCGTGGGGGGAAGCCCGAGTTTTTGCCTCCGTTTCCGCTGATGGGTCGGTCAGGATTTTCGACTTGAGAGATAAAGAGCACTCCACCATTATATACGAAAGCCCCCAACCCGATACCCCTTTGCTTAGACTGGCTTGGAACAAGCAGGACCTGCGGTACATGGCCACAATTTTGATGGACAGCAACAAAGTTGTTATTTTGGACATTCGCTCGCCAAGTGTGCCGGTTGCTGAGCTGGAGAGGCATCATTCCAGTGTCAATGCCATTGCCTGGGCTCCACGGAGCTGCAGACATATTTGCTCCGCTGGGGATGACAAACAGGCGCTTATTTGGGAGTTGCCAATGGTTGCAGGCCCGAATGGCATTGATCCAATGTCCATGTATTCTGCTGCACATGAAATTAACCAGTTGCAGTGGTCCGCCGCCCAGCCTGATTGGATTGCTCTGGCGTTTTCTAACAAGATGCAGCTTTTGAAAGTTTGA

Homology

[Close]

BLAST of CmoCh16G000190 vs. Swiss-Prot
Match: TTG1_ARATH (Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana GN=TTG1 PE=1 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 5.6e-154
Identity = 266/345 (77.10%), Postives = 306/345 (88.70%), Query Frame = 1


Query: 1   MENAAP----RSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVS 60
           M+N+AP    RSE   TYDSP+PLYAMA SS  + S    +RIA+GSF+E   NR+DI+S
Sbjct: 1   MDNSAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSSG---HRIAVGSFLEDYNNRIDILS 60

Query: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGD--SS 120
           FD DS++++  P+LSF+HPYPPTKLMF+P +L    +S D+LASSGD+LRLW++ +  S+
Sbjct: 61  FDSDSMTVKPLPNLSFEHPYPPTKLMFSPPSLRR-PSSGDLLASSGDFLRLWEINEDSST 120

Query: 121 IEPLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDK 180
           +EP+SVLNNSKTSEFCAPLTSFDWN+VEPKR+GT SIDTTCTIWDIEKSVVETQ IAHDK
Sbjct: 121 VEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDK 180

Query: 181 EVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMA 240
           EV+DIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMA
Sbjct: 181 EVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMA 240

Query: 241 TILMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPM 300
           TILMDSNKVVILDIRSP++PVAELERH +SVNAIAWAP+SC+HICS GDD QALIWELP 
Sbjct: 241 TILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPT 300

Query: 301 VAGPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           VAGPNGIDPMS+YSA  EINQLQWS++QPDWI +AF+NKMQLL+V
Sbjct: 301 VAGPNGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]

BLAST of CmoCh16G000190 vs. Swiss-Prot
Match: LWD1_ARATH (WD repeat-containing protein LWD1 OS=Arabidopsis thaliana GN=LWD1 PE=2 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 1.5e-114
Identity = 207/337 (61.42%), Postives = 255/337 (75.67%), Query Frame = 1


Query: 7   RSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQT 66
           RSE   TY++P  +YAM  S      R    R+A+ S +EQ  NRV+IV  D  +  I++
Sbjct: 18  RSEIY-TYEAPWHIYAMNWSVR----RDKKYRLAITSLLEQYPNRVEIVQLDESNGEIRS 77

Query: 67  HPSLSFDHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGD--SSIEPLSVLNNS 126
            P+LSF+HPYPPTK +F PD         D+LA+S D+LRLW++ D  S +E  S LN++
Sbjct: 78  DPNLSFEHPYPPTKTIFIPDKECQ---RPDLLATSSDFLRLWRIADDHSRVELKSCLNSN 137

Query: 127 KTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEA 186
           K SEFC PLTSFDWNE EP+RIGTSS DTTCTIWDIE+  V+TQ IAHDKEV+DIAWG  
Sbjct: 138 KNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGV 197

Query: 187 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV 246
            VFASVSADGSVR+FDLRDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+MDS KVV
Sbjct: 198 GVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVV 257

Query: 247 ILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNGID 306
           +LDIR P++PV EL+RH +SVNAIAWAP S  HIC+AGDD QALIW++  +      G+D
Sbjct: 258 VLDIRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQHVEGGLD 317

Query: 307 PMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           P+  Y+A  EI QLQWS++QPDW+A+AFS K+Q+L+V
Sbjct: 318 PILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]

BLAST of CmoCh16G000190 vs. Swiss-Prot
Match: LWD2_ARATH (WD repeat-containing protein LWD2 OS=Arabidopsis thaliana GN=LWD2 PE=2 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 8.2e-113
Identity = 204/342 (59.65%), Postives = 254/342 (74.27%), Query Frame = 1


Query: 2   ENAAPRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPDS 61
           E  + RSE   TY++P  +YAM  S      R    R+A+ S IEQ  NRV+IV  D  +
Sbjct: 13  EEQSKRSEIY-TYEAPWQIYAMNWSIR----RDKKYRLAITSLIEQYPNRVEIVQLDESN 72

Query: 62  LSIQTHPSLSFDHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGD--SSIEPLS 121
             I++ P+L F+HPYPPTK  F PD         D+LA+S D+LRLW++ D  S +E  S
Sbjct: 73  GEIRSDPNLCFEHPYPPTKTSFIPDKECQ---RPDLLATSSDFLRLWRISDDESRVELKS 132

Query: 122 VLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDI 181
            L++ K SEF  P+TSFDWNE EP+RIGTSSIDTTCTIWDIE+ VV+TQ IAHDKEVYDI
Sbjct: 133 CLSSDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDI 192

Query: 182 AWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMD 241
           AWG   VFASVS DGSVR+FDLRDKEHSTIIYES +P TPL+RL+WNKQD RYMAT++M 
Sbjct: 193 AWGGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMG 252

Query: 242 SNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG-- 301
           S K+V+LDIR P++PV EL+RH +SVNAIAWAP S  HICSAGDD QALIW++  +    
Sbjct: 253 SAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHV 312

Query: 302 PNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
             G+DP+  Y+A  E+ QLQWS++QPDW+A+AFSNK+Q+L+V
Sbjct: 313 EGGLDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346

[Close]

BLAST of CmoCh16G000190 vs. Swiss-Prot
Match: DCAF7_DICDI (DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum GN=wdr68 PE=3 SV=2)

HSP 1 Score: 351.3 bits (900), Expect = 1.2e-95
Identity = 186/330 (56.36%), Postives = 235/330 (71.21%), Query Frame = 1


Query: 13  TYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQTHPSLSF 72
           TY+SP  +Y ++ SS        P R+A+GSF+E  TNRVD++  + ++   +      F
Sbjct: 8   TYNSPWVIYGLSWSSRVNR----PFRLAIGSFLEDYTNRVDVIQLNEETDQFEV--VCGF 67

Query: 73  DHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGDS--SIEPLSVLNNSKTSEFC 132
           +HPYPPTK M+ PD  S   N  D+LA++GDYLRLW+VG +  SI+  S+L N   SEFC
Sbjct: 68  EHPYPPTKCMWIPDKNS---NRPDLLATTGDYLRLWEVGSNQRSIKLKSLLTNV-ISEFC 127

Query: 133 APLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEAR-VFAS 192
           APL+SFDWNE +P  + TSSIDTTCTIW+IE    +TQ IAHDKEV+DIA+     +FAS
Sbjct: 128 APLSSFDWNETDPSLLATSSIDTTCTIWNIETGQAKTQLIAHDKEVFDIAFARGTDLFAS 187

Query: 193 VSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIR 252
           V ADGS+R+FDLR+ EHSTIIYE+P    PLLRL WNKQD  Y+ATI  DS KV+ILDIR
Sbjct: 188 VGADGSLRMFDLRNLEHSTIIYETPS-FVPLLRLCWNKQDPNYLATIQQDSPKVIILDIR 247

Query: 253 SPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMYSA 312
            PSVP AEL  H S+VN I+WAP S  HIC+  DDKQALIW+L  +  P   DP+  Y+A
Sbjct: 248 VPSVPAAELVFHKSAVNGISWAPHSSCHICTVSDDKQALIWDLSSMPKPIE-DPLLTYNA 307

Query: 313 AHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
             EINQL WS++QPDWIA+AFS+ +Q+LKV
Sbjct: 308 LAEINQLSWSSSQPDWIAIAFSSHLQILKV 325

[Close]

BLAST of CmoCh16G000190 vs. Swiss-Prot
Match: DCAF7_HUMAN (DDB1- and CUL4-associated factor 7 OS=Homo sapiens GN=DCAF7 PE=1 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 1.2e-90
Identity = 180/342 (52.63%), Postives = 229/342 (66.96%), Query Frame = 1


Query: 14  YDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQTHPSLSFD 73
           Y++P  +YAM  S      + F  R+ALGSF+E+  N+V +V  D +S       +  FD
Sbjct: 13  YEAPWTVYAMNWSVRP--DKRF--RLALGSFVEEYNNKVQLVGLDEESSEFICRNT--FD 72

Query: 74  HPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSVLNNSKTSEFCAPL 133
           HPYP TKLM+ PD         D+LA+SGDYLR+W+VG++      +LNN+K S+FCAPL
Sbjct: 73  HPYPTTKLMWIPDTKGVY---PDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPL 132

Query: 134 TSFDWNEVEPKRIGTSSIDTTCTIWDIE-----------KSVVETQFIAHDKEVYDIAWG 193
           TSFDWNEV+P  +GTSSIDTTCTIW +E              V+TQ IAHDKEVYDIA+ 
Sbjct: 133 TSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFS 192

Query: 194 EA----RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILM 253
            A     +FASV ADGSVR+FDLR  EHSTIIYE PQ   PLLRL WNKQD  Y+AT+ M
Sbjct: 193 RAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQ-HHPLLRLCWNKQDPNYLATMAM 252

Query: 254 DSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGP 313
           D  +VVILD+R P  PVA L  H + VN IAWAP S  HIC+A DD QALIW++  +  P
Sbjct: 253 DGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQM--P 312

Query: 314 NGI-DPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
             I DP+  Y+A  EIN +QW++ QPDWIA+ ++N +++L+V
Sbjct: 313 RAIEDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV 342

[Close]

BLAST of CmoCh16G000190 vs. TrEMBL
Match: B7SBL6_CUCSA (WD-repeat protein OS=Cucumis sativus GN=TTG1 PE=2 SV=1)

HSP 1 Score: 621.3 bits (1601), Expect = 6.9e-175
Identity = 305/339 (89.97%), Postives = 320/339 (94.40%), Query Frame = 1


Query: 1   MENAAPRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPD 60
           ME+AA RSEF+ATY+SPHPLYAMAISS H HS  F +RIALGSF+E+  NRVDIVSFDPD
Sbjct: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SLSIQTHPSLSFDHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120
           S+SI+ +PSLSF+HPYPPTKLMFNP  LSSL      LASSGD LRLW++GDSSIEPLS+
Sbjct: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSL------LASSGDSLRLWKLGDSSIEPLSL 120

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180

Query: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS
Sbjct: 181 WGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240

Query: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NK+VILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 241 NKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300

Query: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           IDPMSMYSAA EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 IDPMSMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]

BLAST of CmoCh16G000190 vs. TrEMBL
Match: M5X1V3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008187mg PE=4 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 5.7e-161
Identity = 280/343 (81.63%), Postives = 312/343 (90.96%), Query Frame = 1


Query: 1   MENAAPRS----EFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVS 60
           MEN+A  S    E   TY+SP+PLYAMA S + T +R   +RIA+GSFIE+ +NRVDI+S
Sbjct: 1   MENSAQESHLGQENSVTYESPYPLYAMAFSPSQTRNRHQHHRIAVGSFIEEYSNRVDILS 60

Query: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGDSSIE 120
           FDPD+LS++ +P+LSFDHPYPPTKLMF+P+  +SL  S+D+LASSGDYLRLW+V DSS+E
Sbjct: 61  FDPDTLSVKPNPTLSFDHPYPPTKLMFHPNP-NSLHKSNDVLASSGDYLRLWEVRDSSVE 120

Query: 121 PLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEV 180
           P+ VLNNSKTSEFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEV
Sbjct: 121 PIQVLNNSKTSEFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEV 180

Query: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 240
           YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI
Sbjct: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 240

Query: 241 LMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVA 300
           LMDSNKVVILDIRSP++PVAELERH +SVNAIAWAP+SCRHICSAGDD QALIWELP VA
Sbjct: 241 LMDSNKVVILDIRSPTMPVAELERHRASVNAIAWAPQSCRHICSAGDDTQALIWELPTVA 300

Query: 301 GPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           GPNGIDPMSMYSA  EINQLQWSAAQPDWI++AFSNKMQLLKV
Sbjct: 301 GPNGIDPMSMYSAGAEINQLQWSAAQPDWISIAFSNKMQLLKV 342

[Close]

BLAST of CmoCh16G000190 vs. TrEMBL
Match: A0A0A0R9P9_PAESU (WD40 protein OS=Paeonia suffruticosa GN=WD40-2 PE=2 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 9.6e-161
Identity = 281/343 (81.92%), Postives = 309/343 (90.09%), Query Frame = 1


Query: 1   MENAAPRS----EFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVS 60
           MEN+   S    E + TYDSPHPLYAMA SS+ + +    +RIA+GSFIE+  NRVDIVS
Sbjct: 1   MENSTQESHLGSENLVTYDSPHPLYAMAFSSSPSRTHLHHHRIAVGSFIEEFNNRVDIVS 60

Query: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGDSSIE 120
           FD ++L+I+T+P+LSF+HPYPPTKLMF P++ SSLR SSD+LASSGDYLRLW+V D+SIE
Sbjct: 61  FDDETLTIKTNPNLSFEHPYPPTKLMFQPNSASSLRKSSDLLASSGDYLRLWEVRDNSIE 120

Query: 121 PLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEV 180
           PLSVLNNSKTSEFCAPLTSFDWNEVEP+RIGTSSIDTTCTIWD+E+ VVETQ IAHDKEV
Sbjct: 121 PLSVLNNSKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDVERGVVETQLIAHDKEV 180

Query: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 240
           YDIAW EA VFASVSADGSVRIFDLRDKEHSTIIYES QPDTPLLRLAWNKQDLRYMATI
Sbjct: 181 YDIAWCEAGVFASVSADGSVRIFDLRDKEHSTIIYESSQPDTPLLRLAWNKQDLRYMATI 240

Query: 241 LMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVA 300
           LMDSNKVVILDIRSP++PVAELERH SSVNAIAWAP+SCRHICSAGDD QALIWELP VA
Sbjct: 241 LMDSNKVVILDIRSPTMPVAELERHRSSVNAIAWAPQSCRHICSAGDDTQALIWELPTVA 300

Query: 301 GPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           GPNGIDPMSMYSA  EINQLQWSA QPDWIA+AF+NKMQLLKV
Sbjct: 301 GPNGIDPMSMYSAGSEINQLQWSAVQPDWIAIAFANKMQLLKV 343

[Close]

BLAST of CmoCh16G000190 vs. TrEMBL
Match: A0A0A7W590_PRUAV (WD40 OS=Prunus avium GN=WD40 PE=2 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 1.3e-160
Identity = 281/343 (81.92%), Postives = 311/343 (90.67%), Query Frame = 1


Query: 1   MENAAPRS----EFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVS 60
           MEN+A  S    E   TY+SP+PLYAMA SS  T +R   +RIA+GSFIE+ TNRVDI+S
Sbjct: 1   MENSAQESHLGQENSVTYESPYPLYAMAFSSPQTRNRHQHHRIAVGSFIEEYTNRVDILS 60

Query: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGDSSIE 120
           FDPD+LS++ +P+LSFDHPYPPTKLMF+P+  +SL  S+D+LASSGDYLRLW+V DSS+E
Sbjct: 61  FDPDTLSVKPNPTLSFDHPYPPTKLMFHPNP-NSLHKSNDVLASSGDYLRLWEVRDSSVE 120

Query: 121 PLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEV 180
           P+ VLNNSKTSEFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEV
Sbjct: 121 PIQVLNNSKTSEFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEV 180

Query: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 240
           YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI
Sbjct: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 240

Query: 241 LMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVA 300
           LMDSNKVVILDIRSP++PVAELERH +SVNAIAWAP+S RHICSAGDD QALIWELP VA
Sbjct: 241 LMDSNKVVILDIRSPTMPVAELERHRASVNAIAWAPQSSRHICSAGDDTQALIWELPTVA 300

Query: 301 GPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           GPNGIDPMSMYSA  EINQLQWSAAQPDWI++AFSNKMQLLKV
Sbjct: 301 GPNGIDPMSMYSAGAEINQLQWSAAQPDWISIAFSNKMQLLKV 342

[Close]

BLAST of CmoCh16G000190 vs. TrEMBL
Match: Q9M610_MALDO (TTG1 OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 572.8 bits (1475), Expect = 2.8e-160
Identity = 277/343 (80.76%), Postives = 311/343 (90.67%), Query Frame = 1


Query: 1   MENAAPRSEFMA----TYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVS 60
           MEN+   S   A    TY+SP+PLYAMA +S  T +R   +RIA+GSFIE+ +NRVDI+S
Sbjct: 1   MENSTQESHLRAENSVTYESPYPLYAMAFASPQTRTRHQHHRIAVGSFIEEYSNRVDILS 60

Query: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGDSSIE 120
           FDPD+LSI+ +P+LSFDHPYPPTKLMF+P+  ++L  ++D+LASSGDYLRLW+VGDS++E
Sbjct: 61  FDPDTLSIKPNPTLSFDHPYPPTKLMFHPNP-NALHKTNDVLASSGDYLRLWEVGDSTVE 120

Query: 121 PLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEV 180
           P+ VLNNSKTSEFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEV
Sbjct: 121 PIQVLNNSKTSEFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEV 180

Query: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 240
           YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI
Sbjct: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 240

Query: 241 LMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVA 300
           LMDSNKVVILDIRSP++PVAELERH  SVNAIAWAP+SCRHICSAGDD QALIW+LP VA
Sbjct: 241 LMDSNKVVILDIRSPTMPVAELERHRGSVNAIAWAPQSCRHICSAGDDTQALIWDLPTVA 300

Query: 301 GPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           GPNGIDPMSMYSA  EINQLQWSAAQPDWI++AFSNKMQLLKV
Sbjct: 301 GPNGIDPMSMYSAGAEINQLQWSAAQPDWISIAFSNKMQLLKV 342

[Close]

BLAST of CmoCh16G000190 vs. TAIR10
Match: AT5G24520.1 (AT5G24520.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 545.0 bits (1403), Expect = 3.2e-155
Identity = 266/345 (77.10%), Postives = 306/345 (88.70%), Query Frame = 1


Query: 1   MENAAP----RSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVS 60
           M+N+AP    RSE   TYDSP+PLYAMA SS  + S    +RIA+GSF+E   NR+DI+S
Sbjct: 1   MDNSAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSSG---HRIAVGSFLEDYNNRIDILS 60

Query: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGD--SS 120
           FD DS++++  P+LSF+HPYPPTKLMF+P +L    +S D+LASSGD+LRLW++ +  S+
Sbjct: 61  FDSDSMTVKPLPNLSFEHPYPPTKLMFSPPSLRR-PSSGDLLASSGDFLRLWEINEDSST 120

Query: 121 IEPLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDK 180
           +EP+SVLNNSKTSEFCAPLTSFDWN+VEPKR+GT SIDTTCTIWDIEKSVVETQ IAHDK
Sbjct: 121 VEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDK 180

Query: 181 EVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMA 240
           EV+DIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMA
Sbjct: 181 EVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMA 240

Query: 241 TILMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPM 300
           TILMDSNKVVILDIRSP++PVAELERH +SVNAIAWAP+SC+HICS GDD QALIWELP 
Sbjct: 241 TILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPT 300

Query: 301 VAGPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           VAGPNGIDPMS+YSA  EINQLQWS++QPDWI +AF+NKMQLL+V
Sbjct: 301 VAGPNGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]

BLAST of CmoCh16G000190 vs. TAIR10
Match: AT1G12910.1 (AT1G12910.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 414.1 bits (1063), Expect = 8.4e-116
Identity = 207/337 (61.42%), Postives = 255/337 (75.67%), Query Frame = 1


Query: 7   RSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQT 66
           RSE   TY++P  +YAM  S      R    R+A+ S +EQ  NRV+IV  D  +  I++
Sbjct: 18  RSEIY-TYEAPWHIYAMNWSVR----RDKKYRLAITSLLEQYPNRVEIVQLDESNGEIRS 77

Query: 67  HPSLSFDHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGD--SSIEPLSVLNNS 126
            P+LSF+HPYPPTK +F PD         D+LA+S D+LRLW++ D  S +E  S LN++
Sbjct: 78  DPNLSFEHPYPPTKTIFIPDKECQ---RPDLLATSSDFLRLWRIADDHSRVELKSCLNSN 137

Query: 127 KTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEA 186
           K SEFC PLTSFDWNE EP+RIGTSS DTTCTIWDIE+  V+TQ IAHDKEV+DIAWG  
Sbjct: 138 KNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGV 197

Query: 187 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV 246
            VFASVSADGSVR+FDLRDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+MDS KVV
Sbjct: 198 GVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVV 257

Query: 247 ILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNGID 306
           +LDIR P++PV EL+RH +SVNAIAWAP S  HIC+AGDD QALIW++  +      G+D
Sbjct: 258 VLDIRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQHVEGGLD 317

Query: 307 PMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           P+  Y+A  EI QLQWS++QPDW+A+AFS K+Q+L+V
Sbjct: 318 PILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]

BLAST of CmoCh16G000190 vs. TAIR10
Match: AT3G26640.1 (AT3G26640.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 408.3 bits (1048), Expect = 4.6e-114
Identity = 204/342 (59.65%), Postives = 254/342 (74.27%), Query Frame = 1


Query: 2   ENAAPRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPDS 61
           E  + RSE   TY++P  +YAM  S      R    R+A+ S IEQ  NRV+IV  D  +
Sbjct: 13  EEQSKRSEIY-TYEAPWQIYAMNWSIR----RDKKYRLAITSLIEQYPNRVEIVQLDESN 72

Query: 62  LSIQTHPSLSFDHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGD--SSIEPLS 121
             I++ P+L F+HPYPPTK  F PD         D+LA+S D+LRLW++ D  S +E  S
Sbjct: 73  GEIRSDPNLCFEHPYPPTKTSFIPDKECQ---RPDLLATSSDFLRLWRISDDESRVELKS 132

Query: 122 VLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDI 181
            L++ K SEF  P+TSFDWNE EP+RIGTSSIDTTCTIWDIE+ VV+TQ IAHDKEVYDI
Sbjct: 133 CLSSDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDI 192

Query: 182 AWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMD 241
           AWG   VFASVS DGSVR+FDLRDKEHSTIIYES +P TPL+RL+WNKQD RYMAT++M 
Sbjct: 193 AWGGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMG 252

Query: 242 SNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG-- 301
           S K+V+LDIR P++PV EL+RH +SVNAIAWAP S  HICSAGDD QALIW++  +    
Sbjct: 253 SAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHV 312

Query: 302 PNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
             G+DP+  Y+A  E+ QLQWS++QPDW+A+AFSNK+Q+L+V
Sbjct: 313 EGGLDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346

[Close]

BLAST of CmoCh16G000190 vs. TAIR10
Match: AT1G29260.1 (AT1G29260.1 peroxin 7)

HSP 1 Score: 79.0 bits (193), Expect = 6.4e-15
Identity = 60/201 (29.85%), Postives = 91/201 (45.27%), Query Frame = 1


Query: 99  ASSGDYLRLWQVGDSSIE----PLSVLNNSKTS--EFCAPLTSFDWNEVEPKRIGTSSID 158
           + S D + +  +GD S++     L   +N   S  E    + S D+N        TSS D
Sbjct: 69  SESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSFLTSSWD 128

Query: 159 TTCTIWDIEKSVVETQFIAHDKEVYDIAWGEAR--VFASVSADGSVRIFDLRDKEHSTII 218
            T  +W +++      F  H   VY   W      VFAS S D ++RI+D+R+   + II
Sbjct: 129 DTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMII 188

Query: 219 YESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPSVPVAELERHHSSVNAIAW 278
              P  D  +L   WNK D   +AT  +D   V + D+RS  VP+A L  H  +V  + +
Sbjct: 189 ---PAHDFEILSCDWNKYDDCILATSSVDKT-VKVWDVRSYRVPLAVLNGHGYAVRKVKF 248

Query: 279 APRSCRHICSAGDDKQALIWE 292
           +P     I S   D    +W+
Sbjct: 249 SPHRRSLIASCSYDMSVCLWD 265

[Close]

BLAST of CmoCh16G000190 vs. TAIR10
Match: AT2G19540.1 (AT2G19540.1 Transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 60.1 bits (144), Expect = 3.1e-09
Identity = 41/168 (24.40%), Postives = 71/168 (42.26%), Query Frame = 1


Query: 135 SFDWNEVEPKRIGTSSIDTTCTIWDIEK---SVVETQFIAHDKEVYDIAWG--EARVFAS 194
           + DW+     R+ +    +   +W+      +V    F  H   V D+ W   E  VFAS
Sbjct: 228 AIDWSPATAGRLLSGDCKSMIHLWEPASGSWAVDPIPFAGHTASVEDLQWSPAEENVFAS 287

Query: 195 VSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIR 254
            S DGSV ++D+R  +   + +++   D  +  ++WN+     +A+   D     I D+R
Sbjct: 288 CSVDGSVAVWDIRLGKSPALSFKAHNADVNV--ISWNRLASCMLAS-GSDDGTFSIRDLR 347

Query: 255 ---SPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPM 295
                   VA  E H   + +I W+      +     D Q  IW+L +
Sbjct: 348 LIKGGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSGDNQLTIWDLSL 392

[Close]

BLAST of CmoCh16G000190 vs. NCBI nr
Match: gi|659111171|ref|XP_008455615.1| (PREDICTED: protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo])

HSP 1 Score: 622.9 bits (1605), Expect = 3.4e-175
Identity = 308/339 (90.86%), Postives = 320/339 (94.40%), Query Frame = 1


Query: 1   MENAAPRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPD 60
           MENAA RSEF+ATYDSPHPLYAMAISS H HS  F +RIALGSF+E+  NRVDIVSFDPD
Sbjct: 1   MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SLSIQTHPSLSFDHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120
           S+SI+T+PSLSF+HPYPPTKLMFNP  LSSL      LASSGD LRLW+VGDSSIEPLS+
Sbjct: 61  SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSL------LASSGDSLRLWKVGDSSIEPLSL 120

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 121 LNNSKTSEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180

Query: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS
Sbjct: 181 WGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240

Query: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NK+VILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 241 NKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300

Query: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           IDPMSMYSAA EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 IDPMSMYSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]

BLAST of CmoCh16G000190 vs. NCBI nr
Match: gi|525507294|ref|NP_001267687.1| (protein TRANSPARENT TESTA GLABRA 1-like [Cucumis sativus])

HSP 1 Score: 621.3 bits (1601), Expect = 9.9e-175
Identity = 305/339 (89.97%), Postives = 320/339 (94.40%), Query Frame = 1


Query: 1   MENAAPRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPD 60
           ME+AA RSEF+ATY+SPHPLYAMAISS H HS  F +RIALGSF+E+  NRVDIVSFDPD
Sbjct: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SLSIQTHPSLSFDHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120
           S+SI+ +PSLSF+HPYPPTKLMFNP  LSSL      LASSGD LRLW++GDSSIEPLS+
Sbjct: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSL------LASSGDSLRLWKLGDSSIEPLSL 120

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180

Query: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS
Sbjct: 181 WGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240

Query: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NK+VILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 241 NKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300

Query: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           IDPMSMYSAA EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 IDPMSMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]

BLAST of CmoCh16G000190 vs. NCBI nr
Match: gi|596003551|ref|XP_007218262.1| (hypothetical protein PRUPE_ppa008187mg [Prunus persica])

HSP 1 Score: 575.1 bits (1481), Expect = 8.1e-161
Identity = 280/343 (81.63%), Postives = 312/343 (90.96%), Query Frame = 1


Query: 1   MENAAPRS----EFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVS 60
           MEN+A  S    E   TY+SP+PLYAMA S + T +R   +RIA+GSFIE+ +NRVDI+S
Sbjct: 1   MENSAQESHLGQENSVTYESPYPLYAMAFSPSQTRNRHQHHRIAVGSFIEEYSNRVDILS 60

Query: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGDSSIE 120
           FDPD+LS++ +P+LSFDHPYPPTKLMF+P+  +SL  S+D+LASSGDYLRLW+V DSS+E
Sbjct: 61  FDPDTLSVKPNPTLSFDHPYPPTKLMFHPNP-NSLHKSNDVLASSGDYLRLWEVRDSSVE 120

Query: 121 PLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEV 180
           P+ VLNNSKTSEFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEV
Sbjct: 121 PIQVLNNSKTSEFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEV 180

Query: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 240
           YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI
Sbjct: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 240

Query: 241 LMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVA 300
           LMDSNKVVILDIRSP++PVAELERH +SVNAIAWAP+SCRHICSAGDD QALIWELP VA
Sbjct: 241 LMDSNKVVILDIRSPTMPVAELERHRASVNAIAWAPQSCRHICSAGDDTQALIWELPTVA 300

Query: 301 GPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           GPNGIDPMSMYSA  EINQLQWSAAQPDWI++AFSNKMQLLKV
Sbjct: 301 GPNGIDPMSMYSAGAEINQLQWSAAQPDWISIAFSNKMQLLKV 342

[Close]

BLAST of CmoCh16G000190 vs. NCBI nr
Match: gi|645257921|ref|XP_008234637.1| (PREDICTED: protein TRANSPARENT TESTA GLABRA 1 isoform X2 [Prunus mume])

HSP 1 Score: 574.3 bits (1479), Expect = 1.4e-160
Identity = 280/343 (81.63%), Postives = 311/343 (90.67%), Query Frame = 1


Query: 1   MENAAPRS----EFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVS 60
           MEN+A  S    E   TY+SP+PLYAMA S   T +R   +RIA+GSFIE+ +NRVDI+S
Sbjct: 1   MENSAQESHLGQENSVTYESPYPLYAMAFSPPQTRNRHQHHRIAVGSFIEEYSNRVDILS 60

Query: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGDSSIE 120
           FDPD+LS++ +P+LSFDHPYPPTKLMF+P+  +SL  S+D+LASSGDYLRLW+V DSS+E
Sbjct: 61  FDPDTLSVKPNPTLSFDHPYPPTKLMFHPNP-NSLHKSNDVLASSGDYLRLWEVRDSSVE 120

Query: 121 PLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEV 180
           P+ VLNNSKTSEFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEV
Sbjct: 121 PIQVLNNSKTSEFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEV 180

Query: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 240
           YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI
Sbjct: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 240

Query: 241 LMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVA 300
           LMDSNKVVILDIRSP++PVAELERH +SVNAIAWAP+SCRHICSAGDD QALIWELP VA
Sbjct: 241 LMDSNKVVILDIRSPTMPVAELERHRASVNAIAWAPQSCRHICSAGDDTQALIWELPTVA 300

Query: 301 GPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           GPNGIDPMSMYSA  EINQLQWSAAQPDWI++AFSNKMQLLKV
Sbjct: 301 GPNGIDPMSMYSAGAEINQLQWSAAQPDWISIAFSNKMQLLKV 342

[Close]

BLAST of CmoCh16G000190 vs. NCBI nr
Match: gi|700744516|gb|AIU98520.1| (WD40 protein [Paeonia suffruticosa])

HSP 1 Score: 574.3 bits (1479), Expect = 1.4e-160
Identity = 281/343 (81.92%), Postives = 309/343 (90.09%), Query Frame = 1


Query: 1   MENAAPRS----EFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVS 60
           MEN+   S    E + TYDSPHPLYAMA SS+ + +    +RIA+GSFIE+  NRVDIVS
Sbjct: 1   MENSTQESHLGSENLVTYDSPHPLYAMAFSSSPSRTHLHHHRIAVGSFIEEFNNRVDIVS 60

Query: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGDSSIE 120
           FD ++L+I+T+P+LSF+HPYPPTKLMF P++ SSLR SSD+LASSGDYLRLW+V D+SIE
Sbjct: 61  FDDETLTIKTNPNLSFEHPYPPTKLMFQPNSASSLRKSSDLLASSGDYLRLWEVRDNSIE 120

Query: 121 PLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEV 180
           PLSVLNNSKTSEFCAPLTSFDWNEVEP+RIGTSSIDTTCTIWD+E+ VVETQ IAHDKEV
Sbjct: 121 PLSVLNNSKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDVERGVVETQLIAHDKEV 180

Query: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 240
           YDIAW EA VFASVSADGSVRIFDLRDKEHSTIIYES QPDTPLLRLAWNKQDLRYMATI
Sbjct: 181 YDIAWCEAGVFASVSADGSVRIFDLRDKEHSTIIYESSQPDTPLLRLAWNKQDLRYMATI 240

Query: 241 LMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVA 300
           LMDSNKVVILDIRSP++PVAELERH SSVNAIAWAP+SCRHICSAGDD QALIWELP VA
Sbjct: 241 LMDSNKVVILDIRSPTMPVAELERHRSSVNAIAWAPQSCRHICSAGDDTQALIWELPTVA 300

Query: 301 GPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           GPNGIDPMSMYSA  EINQLQWSA QPDWIA+AF+NKMQLLKV
Sbjct: 301 GPNGIDPMSMYSAGSEINQLQWSAVQPDWIAIAFANKMQLLKV 343

The following BLAST results are available for this feature:

BLAST of CmoCh16G000190 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TTG1_ARATH	5.6e-154	77.10	Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana GN=TTG1 PE=1 SV=1	[more]
LWD1_ARATH	1.5e-114	61.42	WD repeat-containing protein LWD1 OS=Arabidopsis thaliana GN=LWD1 PE=2 SV=1	[more]
LWD2_ARATH	8.2e-113	59.65	WD repeat-containing protein LWD2 OS=Arabidopsis thaliana GN=LWD2 PE=2 SV=1	[more]
DCAF7_DICDI	1.2e-95	56.36	DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum GN=wdr68 ...	[more]
DCAF7_HUMAN	1.2e-90	52.63	DDB1- and CUL4-associated factor 7 OS=Homo sapiens GN=DCAF7 PE=1 SV=1	[more]

BLAST of CmoCh16G000190 vs. TrEMBL


Match Name	E-value	Identity	Description
B7SBL6_CUCSA	6.9e-175	89.97	WD-repeat protein OS=Cucumis sativus GN=TTG1 PE=2 SV=1	[more]
M5X1V3_PRUPE	5.7e-161	81.63	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008187mg PE=4 SV=1	[more]
A0A0A0R9P9_PAESU	9.6e-161	81.92	WD40 protein OS=Paeonia suffruticosa GN=WD40-2 PE=2 SV=1	[more]
A0A0A7W590_PRUAV	1.3e-160	81.92	WD40 OS=Prunus avium GN=WD40 PE=2 SV=1	[more]
Q9M610_MALDO	2.8e-160	80.76	TTG1 OS=Malus domestica PE=2 SV=1	[more]

BLAST of CmoCh16G000190 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G24520.1	3.2e-155	77.10	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G12910.1	8.4e-116	61.42	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G26640.1	4.6e-114	59.65	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G29260.1	6.4e-15	29.85	peroxin 7	[more]
AT2G19540.1	3.1e-09	24.40	Transducin family protein / WD-40 repeat family protein	[more]

BLAST of CmoCh16G000190 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659111171\|ref\|XP_008455615.1\|	3.4e-175	90.86	PREDICTED: protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo]	[more]
gi\|525507294\|ref\|NP_001267687.1\|	9.9e-175	89.97	protein TRANSPARENT TESTA GLABRA 1-like [Cucumis sativus]	[more]
gi\|596003551\|ref\|XP_007218262.1\|	8.1e-161	81.63	hypothetical protein PRUPE_ppa008187mg [Prunus persica]	[more]
gi\|645257921\|ref\|XP_008234637.1\|	1.4e-160	81.63	PREDICTED: protein TRANSPARENT TESTA GLABRA 1 isoform X2 [Prunus mume]	[more]
gi\|700744516\|gb\|AIU98520.1\|	1.4e-160	81.92	WD40 protein [Paeonia suffruticosa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR017986	WD40_repeat_dom
IPR019775	WD40_repeat_CS

Vocabulary: **Biological Process**
Term	Definition
GO:0007275	multicellular organism development

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009957	epidermal cell fate specification
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0032880	regulation of protein localization
biological_process	GO:0010026	trichome differentiation
biological_process	GO:0044238	primary metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G000190.1	CmoCh16G000190.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 255..290 score: 0.027coord: 169..200 score:
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 114..159 score: 0.79coord: 65..109 score: 15.0coord: 251..291 score: 1.2E-5coord: 162..200 score: 1.
IPR001680	WD40 repeat	PROFILE	PS50082	WD_REPEATS_2	coord: 258..292 score: 9.74coord: 169..209 score: 9
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	G3DSA:2.130.10.10		coord: 65..331 score: 1.7
IPR017986	WD40-repeat-containing domain	PROFILE	PS50294	WD_REPEATS_REGION	coord: 126..300 score: 13
IPR017986	WD40-repeat-containing domain	unknown	SSF50978	WD40 repeat-like	coord: 37..293 score: 1.4
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 146..160 score: -coord: 278..292 scor
None	No IPR available	PANTHER	PTHR19919	WD REPEAT CONTAINING PROTEIN	coord: 7..339 score: 2.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh16G000190	CmaCh16G000160	Cucurbita maxima (Rimu)	cmacmoB322
CmoCh16G000190	Cp4.1LG14g07030	Cucurbita pepo (Zucchini)	cmocpeB307
CmoCh16G000190	Carg15035	Silver-seed gourd	carcmoB1326

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh16G000190	Cucurbita pepo (Zucchini)	cmocpeB303
CmoCh16G000190	Bottle gourd (USVL1VR-Ls)	cmolsiB319
CmoCh16G000190	Silver-seed gourd	carcmoB0730
CmoCh16G000190	Cucumber (Chinese Long) v3	cmocucB0392
CmoCh16G000190	Cucurbita moschata (Rifu)	cmocmoB275
CmoCh16G000190	Cucumber (Gy14) v1	cgycmoB0751
CmoCh16G000190	Cucurbita maxima (Rimu)	cmacmoB405
CmoCh16G000190	Wild cucumber (PI 183967)	cmocpiB335