CmaCh16G000160 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G000160
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	WD40 repeat protein
Location	Cma_Chr16 : 92428 .. 100881 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAACGCTGCCCCAAGATCCGAATTCATGGCCACCTACGATTCCCCGCACCCTCTCTATGCCATGGCCATCTCTTCCGCCCACACCCACTCTCGCAATTTCCCCAATCGCATAGCCCTTGGTAGCTTCATCGAACAGTGCACCAACCGTGTCGACATTGTGTCTTTTGATCCAGATTCCCTCTCCATTCAAACGCATCCTTCTCTCTCCTTCGACCACCCCTACCCACCCACCAAGCTCATGTTCAATCCCAATGCCCTCTCCTCTCTCCGCAACTCCTCCGACATCTTGGCCTCCTCCGGCGACTATCTCCGCCTCTGGCAAGTTGGAGATTCTTCTATCGAACCCCTCTCTGTCCTCAACAACAGCAAAACCAGTGAATTCTGCGCCCCCTTAACTTCCTTCGACTGGAATGAAGTCGAGCCCAAGAGAATTGGAACCTCCAGCATTGATACCACTTGTACTATTTGGGATATTGAGAAGAGCGTGGTTGAAACCCAGTTCATAGCTCACGACAAAGAGGTTTATGACATTGCGTGGGGGGAAGCCCGGGTTTTTGCCTCCGTTTCCGCTGATGGGTCGGTCAGGATTTTCGACTTGAGAGATAAAGAGCACTCCACCATTATATACGAAAGCCCCCAACCCGATTCCCCTTTGCTTAGACTGGCTTGGAACAAGCAGGACCTGCGGTACATGGCCACAATTTTGATGGATAGCAACAAAGTTGTTATTTTGGACATTCGCTCGCCAAGTGTGCCGGTTGCTGAGTTGGAGAGGCATCATTCCAGTGTCAATGCCATTGCCTGGGCTCCACGGAGCTGCAGACATATTTGCTCCGCTGGGGATGACAAACAGGCGCTTATTTGGGAGTTGCCAATGGTTGCAGGCCCGAATGGCATTGATCCAATGTCCATGTATTCTGCTGCACATGAAATTAACCAGTTGCAGTGGTCCGCCGCCCAGCCTGATTGGATTGCTCTGGCATTTTCTAACAAGATGCAGCTTTTGAAAGTTTGAGGTCTGAGAACGTTTTCCACTGTACCTATTGTGTATCAACTACTGCTATATATTTTCTTACCTTCGTTTTCCCCTGTTCTATATAAGCCACATATATTGCTATAGGCGTAGTTTTAGTTTCAGTGCTAAGATGTTATTGCTACTCGGATGGTATAAATGTTGATGCTTCATCTTGCCAACAGACGGCGCAATTTAAGTTACTTCGCTTGAATTCCTTATATTTAATCAAACCTAAGCTAGCCACTTTCTTATCCCTCCAAAGTTTGATTTGTTTATTTTATTTGCATTACATTAGGCAATAGGAGCAGGCTTTGTTGTTTTGAGTTCTAATGCTATGTATCCCTCAACTCTGTTGGAAACCAAGGAAGAACAGCTACCTTCACACACTGCTGATCCTTGCTTCCAACATATACGCCAGTTTGGATCAAGGGTTGTTGACAATGGGAGAATCTACTTGTTCTCTTGCAATGTTGATTTGAATTTCCGATGGTTCGTTCTACTATAAGTTGACAAGTGGAAGTGTGTCATTTGCCTAGGTTCTGGGTTCTTGGGCTTGCCAAATGCATGTCATGACTTTTATTGAGTGTTAAGAAGATGAAGACAGAAGGCATTTCTAGTTTATAATCTCAGCTTATGAGGTGAGATATGATTGGATTGGCTAGAGTTGATACATAACCCAAGTTGCAATAATAATGTAGCTATTCATTCAGATTCTGAAGATTCAATGGCAGCCACAGCTTTTACTAAAAATCGTTCATGATGTGGGGCTGAAATTAACAACAAAAATATGTTTTTTTCTTTTAATGTTCATGATGCAGACTAGGGATCATTTTTTTTAATTGAGAACCCTTCATCATGAACAAAAGTTGTGGAGTCCAACAGAGAACCCTTCCTCCCTGCTTGCATCCATCTTTAACGCAGTCGCTTGATGCACCAAGACGTCTTTATGAGCTCATCTGATATGGGTAAAAGTTGGTACTGAATATCTATCCAGACTGTCCTGTTGCATGGCAGAGTGAGAGTACACAGATACAAAGACCCACTGCGCATTTTATGAAAGAAAATGGGACACCTAATGGAGTAATATCCAAGTGGTCCATCAGCTGAGATGGAGACCGTCAAATTATCCAAATGTTGCATTGGGAGACAGTTCCCTTGGGATTTCGGATAACGCACACAACCCACCAGATCTTTTAACTATGGTTTGGAAAATCCCATTTTGTTAAGCCTCCTCTTCTAACCTACAAAATTGAAGTTTAAATTACATTTATTTAAGAAGATTGATGCTGCAGTGGCACGGGATTCGTCCTGCGTCCACAAAAAGGCCTCGCTCTCTTTATCCATCTGTTTCCCTTCTCTCCCCATCTCTCTCCTTGTTTCTTCAGTTTTCAAATTCCTGTTTCCATTCCCATGGCCGCTCTCACCTCTTCTATGCAAACGAATCTCCTCTCCGCCCATTCCTTAACGCCTTCTTCTTCTTCTTCTTCTTCTACAGTTTCTACTTTTCCTACCTCCTTCTCGCTTCCCACCTCTACCAACTCCGCTGTTCTCAAAATTCACGCTCTCTCTTCCCATGCTTCTGCTTTCTTCAACTCCTGCAACCACTGCTTTCGGACCATTGTGATAGCACCTCGCAAACGTCATGCCACAAGATCTTTCAGTATTCGGATGTCCTGGGACGGCCCTCTCTCTTCCGTCAAATTAATTGTTCAAGGCAAAAATTTGGAGGTATTTTAGCTTCATATTCGCTCTTGTTTCTCAGGCAATGCAAGCTTCTGTTCCAATTCTTGTTTTCATTTTTTTTTTCATGTGTTTCCTACTGCGCTGAAATGTTCGAGTCTTAGGTCTGTCCAGGACTTCTTTACTAGTGAGTGTCTCGTCTAGTCGTTTTCTAATGATTCGGTTCCTTAATCACCTCGTGCTCCTTATTGGGAGTAAGATCTAGAGAGAAATCTCGTGCTCCTTATTCGTGTTCCTTAATCGACCTGCTAACTCACTACCCTTAATAATTGAAGCGTGATGCCAAAACTATCCACTGATTACAAACCTAAACCATTTCTCCCCGCGAACTGAACATTGCAAACACTAATTAGAAACCTATTCCACTGTGTTTCTCCCTTTACTCAAAGCCTAGCCTTGTATTTCTCAACTTCTCCATTACTTTTATTTTCTCCACTTACAACTGCTAATTTCTATGCGTCATTTCTCATGCGTTTTCCATATCAAAACTCATGTCCCTTCTCCATGTTTTACTCTACACAGCCTCCCTGAAATGATCGGTATCAACAATAGTAAGCATGGCATCAGGAATCCACTACCATTTTTTTTTTCTTTCTAAAAAAGGTCCTCACCCTATTTCCTAACTTCATCCAATTTGCTAGATTATTTCATTTTGGGTAACACGCAATGGCAACTTCGTATTTCCCAATTTCAATTGTTTTCTTCTTCCGGTACAACATATCTGCTTGAGGGATTCCTTTGTAAAATTGGATCACGAAATCTATAGGCCCTTGGCTTTTCACTAAACCAAGCCGCACAACTCGAGCTTTATCATCCTGCTTAGTTCTTGAGCATGATTCACACATCCAAAAGCAGTTAAGTACTCAACAGGCCAACTCCACTCCCATTTGGAGTTCTTATTTTAGTGGGTCCTACCTGGAGACATACTGAAAACTTCTTCCAAATCAAAAGAAACAAAAGAAAAAATGGGCTTGTTGGGAAGAAAGATGGTGTGTAGAACACATGTAAGGCACAGTTGGGTTACATGTAAGGCACAGTCGGTTGATCACGCAACAGATCTCTATCTCTCTCTAGATATCTAGAGATGGAGAGAAATGTGATAGTATGAAAGGTTTGGAACTCGAATTCCACTGGACGAGGGTATGGGATTGCTTGACTACATGCAAAAGCTTTTCCTTCAGCTGGATTGAATAATGATCTTTATTTTCAGACTTACACTTAATGTTTGCGAGGCCAAGGTGAAGAACTGGTTAAGCTTAAGCTTGGTTGATTTTGTTAAGGTGAAGAACTGGTTAAGCTTAAGCTTGGTTGATTTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGTGAAGAACTGGTTAAGCTTAAGCTTGGTTGATTTTGTTAAGGTGAAGAACTGGTTAAGCTTAAGCTTGGTTGATTTTGTCAAGGTGAAAGAACTGGTTAAGCTTGGTTGATTTTGTCAGAAAAGAAAGTAGGTTACACTGGTTCATTGATTAGTAAACTTCCAATGTTGGTAAAGCTTAGCTAATGCCATACCCACGAGATCCAAAGCCATACCCACCAGATCCCATAGTGACTTGGCTTTCGGGGTGGTTCTCCGTGGACAATGCCATACCCACCCCACTACGTAGTAATTATATCAATCATGTACGTGTCATCCCTCCATTCTGATTGGTATATCATGAAAAAATCAAGCCATTTGCACTGGGCGTACTGCTTTCTCTCGCCCAATGTTAGCCTTTTCCGCTCGTTTGTTAATTCAACCTGCAAGTCTATTTCTTTGAATTAGTACTGGTTTCTAGGAAAGTTGTTAATGATAATTTAGTCAGTTAGCTTAAGTTGCTATACTTGGAGATACCGGCTAGAGTTGGGTAAGTGTAGTTTGTTGCTGATTTTATGGAGTTAACTAGGCTATTTTTAGCATTTGGAATTTGTATTTATAGTGACAAGTGATTGAATATAACTGTTCACTTCCCAATTCTTCTCTATCTATTAAGAACAGCACCACTGTGAACAGCCTAATTTGCTGGTTCTGGCCAGAAGAAATTTGGGCGTTCTTTAAGCATAGTAGTAGTCATTAAGATTATGTTTTTAAAGCATGCGAATCTCCAAATTGGTGGTCATATCATTCTTGTATACAACTACATTTAGTTATGTGTTTATGCAACCGTCAGTTGTTGAATGCTATTTGAACTCAAAAATTGGTGAGCGCATGCGAAACTCTTTTCAATCAGTACATAGGGGCATATGGCCTTTCCTACTGATCAAAACAAGTTTGAAAAGTCCACACATTAGAGTGTACTCTTTGAAGCATAATGTGAAACTCTCTAGCTCCTTTCACGCCATTGATTTCCTTTGTCGATTACGAAGTAAACATTGCGTAAATTTGGAAGAGACTTAAGCTAAGCTCTAGATATGTTGAAGTTTCATTAAGCCCTTCAACTCAGCTATCCATGTCTTCAATGCTAAAGCTGCACAATATCTTCACCAGTAGATACTATAGGTTAAGGTATAACTTTGAGCATGAACTTATTCACCGCCATTATTAGACTCTTCCAAGATGGAAATACCTTGCACTTTCTTTCCTAAAATAGGGACACAAAGAATTTAAAATTTGCATTCTAAATCGATATGAAAGTAGTTTGAAGATAATATCTGTAGAGTCAAATCAAAAGGGCTAGCTTCAAATTCATTGAAGAGAAAATCAAAAGGGCTAGCTTCAAATTCATTGAAGAGAAAATCAAAAGGGCTAGCTTCAAATTCATTGAAGAGAAGGTTTAGAAACTAACCATTGACTGTAGGTCATCTTCTCCAACTTGCGTTTGTGCCATTCTGCTTTTTTTCTCTTTTTTGAATTTTTTTTTATTTGTTTTCTTAAAATTTCCGGTGCTACAATAGCACTACTCTGATCGACAAATTGTTATTCAGCCCTTTACAGCACTGCTAACACGTGTAAAAAAATTACCTTGTTGGTAGAAACTCCAATGAGAATGACAAGACCATCAACTAGCTATCGGAATTTCAATTACCCAATTTATCATATCTCAATGTTTCAAATGTCGGACCTTGAGTGGATTTATTTTTTTACTGCGCAAAATACTAGTTGACTGAGGCAGTTAAGAAGCACGTGGAAGAGAAGGTTGGCAAGGCAGTCCAGAAGCACAGTCACTTAGTGAGAGAAGTGGATGTCAGACTATCAGTTAGAGGTGGAGAGTTTGGGAAGGGCCCAAGAATTAGAAGATGCGAGGTATTGTATTGTTCCTTTATTTTAAATTTCTCCATATGAATTGAATTCTCTTTCTTTTCTAAAAACATTTGTGTTTGTGTAGGTTACTTTATTCACGAAGAAGCATGGAGTTGTACGAGCAGAGGAAGATGCCGAGACCGTGTATGCAAGCATTGATTTGGTATCTTCCATCATGCAGAGAAAGCTGAGAAAGATTAAAGAGAAAGATTCAGATCATGGCCGGCACATGAAAGGATTTGACAGATCCAAAATAAGAGAACCTGCGCCAATAGTAGTTGAAGATGAGGAAGAGGAAGTTTCTCAGGAAGATGGTGGAGAAGCTATTGATGAGGTTATTCCTTCAACCTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTACCTTGAGTTCATTTTGCTGCATATATTAATCATTTAAGGTGATATTAGCTTGTACAAACTCATGGATTCCATATTTACTATTTTCCACGTGTTGAAGCTAATATGAGTGCCAGAGTTACTAAACCACAGCTGTTATTGCTTAGTTAGAAATTGTTGTTTAGTTTCTTATAAGGAAAAACAATCATCGATTTCGTAGTTGATTTTCTTTTTCCTATCTAGTGGAAAAACAATCATCGATTGCTCAGCATTAGTTGAACCATGTGCGGAGTAAGCAATGCATTCTCAATCTTGATTCCCCTTCTGCTGTTCTTTTTTCAACTAAATTCTCCCAAGCTCCTCGTAGTTATATTAACGGTGTGATCTCACATCGATTGGGAAGAACAACGAAACATTCTTTATAAAGTTGTGGAAACCTCTCTCTAGCAGCAAATTGTTGTGTGAAGGAATCAATATCTCGACATAAGCCAAGAGGCAGATCTTGTGCCACTCCACCTGGTCGTATGAAACTGGCATGCATCCTGGCTCCCGAGACTCTTTCATAAAATTCCAATAATTTCTCCCGCTCCTCAAAAGCCCACAGAGGAACACCTGAAAGGGAAAACCCAAAGAGGACAATATCTGGGTGGACTTACATTTACATGAACATGAAAACATAGGAAATTGGATCTTGTAGCTGTAAGATAGAGGGCTTCCTTAGTTGTGTTAAACAAACACGACTCTCCACAATTGTATGATATTGTCCACTTTGAGCATAAGCTCTCGTGCACTTTGAGCATAAGCTCTCGTGCACTTTGAGCATAAGCTCTCGTGCACTTTGAGCATAAGCTCTCGTGACTTTGCTTTGGGTTTCCCCAAAAAGCCTCATACCAGTGGAGATATTATGAACCCATGATCTTCCATTAGATTAACCAATGTGGGATTCACTCCCAATAACCTCAACAATCCTCCTCTCGAACAAAATACACCTTTTGTTCGACACTTTAGTAACTTTTGACTACACCTTTGAGGCTCACAATTCGTTCGATATTTGAGGATTTTATTGACATGGTTAAGTTTAGGGCATGACTTTGATACCATGTTAAACAAACACGACTCTCTACAATGGTATGATATTGTCCACTTTGAGCATGAACTCTCGTGGCTTTGCTTTGGGCTTCTCCAAAAGGCCTCATACCAGATCTACTGCTAGCAAATATTGTCCTTTTGGCTTTCCCTTTCGGGCTTCCCTAAGCTTTACAACGCGTCTGCTAGGAGAAAGTTTGTTCTCCTCCCCAACCAACGTGGGACATCATAATGTAGAAGCCTACTATTTGTTATTTCTTGTGGAGCTAACATTATGCTTAACTGTTGTTGATTAGCTTCTAACTTTCGGACAGTCCTTCATTGTCTACAAGGGACTGTTACATTGGAATTTCCTTTCAACTTTATCCCTTTAACCTGCTAGTTACCAAGTTGGTTCATCACAACAATTGAGACATCCTTCAAAGCTTGTATAGATCCTTTGCTCTTTATGAGTGTTTTATGGCCCCTTCCAACGTACTTGATCGTTATGGCTTTTGATTCATTTGCCTATTTTGTTGACATTCAAGTCTGGCTGGAAGAAGCAGTTGCATCTATCATTTTTAGATGACTAAATCATGCATCATATATTGGAAGCTTGTGAATAATATATCGAAATGGTTAAAATGTTGTTTTTCCTTTTTCATGTTTATCTTGATTTCAGATTGTTCGGACAAAATACTTCGATATGCCGCCTTTAACAGTTGAAGAAGCAATCGAACAACTAAAGAATATTGACCATGATTTCTATGGTTTCCGGAATGAAGAAACTGGTGCGTTGATTTGATTATTAAAAAAAAACTTGCTTTGTTGGGATTCTGTGCTGTTTATATCGTGGCTTGTTTCATCTTTGGCCCAGGTGAGATTAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTAATCATCCCAAAAGAAAATGGCAATGCTGAGAAAATAGAAACTGTGACAGTTGAAGTAGCCAGAGAAGCCTCCTTGGCGGAATGA

mRNA sequence

ATGGCAAACGCTGCCCCAAGATCCGAATTCATGGCCACCTACGATTCCCCGCACCCTCTCTATGCCATGGCCATCTCTTCCGCCCACACCCACTCTCGCAATTTCCCCAATCGCATAGCCCTTGGTAGCTTCATCGAACAGTGCACCAACCGTGTCGACATTGTGTCTTTTGATCCAGATTCCCTCTCCATTCAAACGCATCCTTCTCTCTCCTTCGACCACCCCTACCCACCCACCAAGCTCATGTTCAATCCCAATGCCCTCTCCTCTCTCCGCAACTCCTCCGACATCTTGGCCTCCTCCGGCGACTATCTCCGCCTCTGGCAAGTTGGAGATTCTTCTATCGAACCCCTCTCTGTCCTCAACAACAGCAAAACCAGTGAATTCTGCGCCCCCTTAACTTCCTTCGACTGGAATGAAGTCGAGCCCAAGAGAATTGGAACCTCCAGCATTGATACCACTTGTACTATTTGGGATATTGAGAAGAGCGTGGTTGAAACCCAGTTCATAGCTCACGACAAAGAGGTTTATGACATTGCGTGGGGGGAAGCCCGGGTTTTTGCCTCCGTTTCCGCTGATGGGTCGGTCAGGATTTTCGACTTGAGAGATAAAGAGCACTCCACCATTATATACGAAAGCCCCCAACCCGATTCCCCTTTGCTTAGACTGGCTTGGAACAAGCAGGACCTGCGGTACATGGCCACAATTTTGATGGATAGCAACAAAGTTGTTATTTTGGACATTCGCTCGCCAAGTGTGCCGGTTGCTGAGTTGGAGAGGCATCATTCCAGTGTCAATGCCATTGCCTGGGCTCCACGGAGCTGCAGACATATTTGCTCCGCTGGGGATGACAAACAGGCGCTTATTTGGGAGTTGCCAATGGTTGCAGGCCCGAATGGCATTGATCCAATGTCCATGTATTCTGCTGCACATGAAATTAACCAGTTGCAGTGGTCCGCCGCCCAGCCTGATTGGATTGCTCTGGCATTTTCTAACAAGATGCAGCTTTTGAAAGCAATAGGAGCAGGCTTTGTTGTTTTGAGTTCTAATGCTATGTATCCCTCAACTCTGTTGGAAACCAAGGAAGAACAGCTACCTTCACACACTGCTGATCCTTGCTTCCAACATATACGCCATTTTCAAATTCCTGTTTCCATTCCCATGGCCGCTCTCACCTCTTCTATGCAAACGAATCTCCTCTCCGCCCATTCCTTAACGCCTTCTTCTTCTTCTTCTTCTTCTACAGTTTCTACTTTTCCTACCTCCTTCTCGCTTCCCACCTCTACCAACTCCGCTGTTCTCAAAATTCACGCTCTCTCTTCCCATGCTTCTGCTTTCTTCAACTCCTGCAACCACTGCTTTCGGACCATTGTGATAGCACCTCGCAAACGTCATGCCACAAGATCTTTCAGTATTCGGATGTCCTGGGACGGCCCTCTCTCTTCCGTCAAATTAATTGTTCAAGGCAAAAATTTGGAGTTGACTGAGGCAGTTAAGAAGCACGTGGAAGAGAAGGTTGGCAAGGCAGTCCAGAAGCACAGTCACTTAGTGAGAGAAGTGGATGTCAGACTATCAGTTAGAGGTGGAGAGTTTGGGAAGGGCCCAAGAATTAGAAGATGCGAGGTTACTTTATTCACGAAGAAGCATGGAGTTGTACGAGCAGAGGAAGATGCCGAGACCGTGTATGCAAGCATTGATTTGGTATCTTCCATCATGCAGAGAAAGCTGAGAAAGATTAAAGAGAAAGATTCAGATCATGGCCGGCACATGAAAGGATTTGACAGATCCAAAATAAGAGAACCTGCGCCAATAGTAGTTGAAGATGAGGAAGAGGAAGTTTCTCAGGAAGATGGTGGAGAAGCTATTGATGAGATTGTTCGGACAAAATACTTCGATATGCCGCCTTTAACAGTTGAAGAAGCAATCGAACAACTAAAGAATATTGACCATGATTTCTATGGTTTCCGGAATGAAGAAACTGGTGAGATTAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTAATCATCCCAAAAGAAAATGGCAATGCTGAGAAAATAGAAACTGTGACAGTTGAAGTAGCCAGAGAAGCCTCCTTGGCGGAATGA

Coding sequence (CDS)

ATGGCAAACGCTGCCCCAAGATCCGAATTCATGGCCACCTACGATTCCCCGCACCCTCTCTATGCCATGGCCATCTCTTCCGCCCACACCCACTCTCGCAATTTCCCCAATCGCATAGCCCTTGGTAGCTTCATCGAACAGTGCACCAACCGTGTCGACATTGTGTCTTTTGATCCAGATTCCCTCTCCATTCAAACGCATCCTTCTCTCTCCTTCGACCACCCCTACCCACCCACCAAGCTCATGTTCAATCCCAATGCCCTCTCCTCTCTCCGCAACTCCTCCGACATCTTGGCCTCCTCCGGCGACTATCTCCGCCTCTGGCAAGTTGGAGATTCTTCTATCGAACCCCTCTCTGTCCTCAACAACAGCAAAACCAGTGAATTCTGCGCCCCCTTAACTTCCTTCGACTGGAATGAAGTCGAGCCCAAGAGAATTGGAACCTCCAGCATTGATACCACTTGTACTATTTGGGATATTGAGAAGAGCGTGGTTGAAACCCAGTTCATAGCTCACGACAAAGAGGTTTATGACATTGCGTGGGGGGAAGCCCGGGTTTTTGCCTCCGTTTCCGCTGATGGGTCGGTCAGGATTTTCGACTTGAGAGATAAAGAGCACTCCACCATTATATACGAAAGCCCCCAACCCGATTCCCCTTTGCTTAGACTGGCTTGGAACAAGCAGGACCTGCGGTACATGGCCACAATTTTGATGGATAGCAACAAAGTTGTTATTTTGGACATTCGCTCGCCAAGTGTGCCGGTTGCTGAGTTGGAGAGGCATCATTCCAGTGTCAATGCCATTGCCTGGGCTCCACGGAGCTGCAGACATATTTGCTCCGCTGGGGATGACAAACAGGCGCTTATTTGGGAGTTGCCAATGGTTGCAGGCCCGAATGGCATTGATCCAATGTCCATGTATTCTGCTGCACATGAAATTAACCAGTTGCAGTGGTCCGCCGCCCAGCCTGATTGGATTGCTCTGGCATTTTCTAACAAGATGCAGCTTTTGAAAGCAATAGGAGCAGGCTTTGTTGTTTTGAGTTCTAATGCTATGTATCCCTCAACTCTGTTGGAAACCAAGGAAGAACAGCTACCTTCACACACTGCTGATCCTTGCTTCCAACATATACGCCATTTTCAAATTCCTGTTTCCATTCCCATGGCCGCTCTCACCTCTTCTATGCAAACGAATCTCCTCTCCGCCCATTCCTTAACGCCTTCTTCTTCTTCTTCTTCTTCTACAGTTTCTACTTTTCCTACCTCCTTCTCGCTTCCCACCTCTACCAACTCCGCTGTTCTCAAAATTCACGCTCTCTCTTCCCATGCTTCTGCTTTCTTCAACTCCTGCAACCACTGCTTTCGGACCATTGTGATAGCACCTCGCAAACGTCATGCCACAAGATCTTTCAGTATTCGGATGTCCTGGGACGGCCCTCTCTCTTCCGTCAAATTAATTGTTCAAGGCAAAAATTTGGAGTTGACTGAGGCAGTTAAGAAGCACGTGGAAGAGAAGGTTGGCAAGGCAGTCCAGAAGCACAGTCACTTAGTGAGAGAAGTGGATGTCAGACTATCAGTTAGAGGTGGAGAGTTTGGGAAGGGCCCAAGAATTAGAAGATGCGAGGTTACTTTATTCACGAAGAAGCATGGAGTTGTACGAGCAGAGGAAGATGCCGAGACCGTGTATGCAAGCATTGATTTGGTATCTTCCATCATGCAGAGAAAGCTGAGAAAGATTAAAGAGAAAGATTCAGATCATGGCCGGCACATGAAAGGATTTGACAGATCCAAAATAAGAGAACCTGCGCCAATAGTAGTTGAAGATGAGGAAGAGGAAGTTTCTCAGGAAGATGGTGGAGAAGCTATTGATGAGATTGTTCGGACAAAATACTTCGATATGCCGCCTTTAACAGTTGAAGAAGCAATCGAACAACTAAAGAATATTGACCATGATTTCTATGGTTTCCGGAATGAAGAAACTGGTGAGATTAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTAATCATCCCAAAAGAAAATGGCAATGCTGAGAAAATAGAAACTGTGACAGTTGAAGTAGCCAGAGAAGCCTCCTTGGCGGAATGA

Protein sequence

MANAAPRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKAIGAGFVVLSSNAMYPSTLLETKEEQLPSHTADPCFQHIRHFQIPVSIPMAALTSSMQTNLLSAHSLTPSSSSSSSTVSTFPTSFSLPTSTNSAVLKIHALSSHASAFFNSCNHCFRTIVIAPRKRHATRSFSIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIMQRKLRKIKEKDSDHGRHMKGFDRSKIREPAPIVVEDEEEEVSQEDGGEAIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGNAEKIETVTVEVAREASLAE

Homology

[Close]

BLAST of CmaCh16G000160 vs. Swiss-Prot
Match: TTG1_ARATH (Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana GN=TTG1 PE=1 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 6.4e-152
Identity = 264/344 (76.74%), Postives = 304/344 (88.37%), Query Frame = 1


Query: 1   MANAAP----RSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVS 60
           M N+AP    RSE   TYDSP+PLYAMA SS  + S +   RIA+GSF+E   NR+DI+S
Sbjct: 1   MDNSAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSSGH---RIAVGSFLEDYNNRIDILS 60

Query: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGD--SS 120
           FD DS++++  P+LSF+HPYPPTKLMF+P +L    +S D+LASSGD+LRLW++ +  S+
Sbjct: 61  FDSDSMTVKPLPNLSFEHPYPPTKLMFSPPSLRR-PSSGDLLASSGDFLRLWEINEDSST 120

Query: 121 IEPLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDK 180
           +EP+SVLNNSKTSEFCAPLTSFDWN+VEPKR+GT SIDTTCTIWDIEKSVVETQ IAHDK
Sbjct: 121 VEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDK 180

Query: 181 EVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMA 240
           EV+DIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPD+PLLRLAWNKQDLRYMA
Sbjct: 181 EVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMA 240

Query: 241 TILMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPM 300
           TILMDSNKVVILDIRSP++PVAELERH +SVNAIAWAP+SC+HICS GDD QALIWELP 
Sbjct: 241 TILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPT 300

Query: 301 VAGPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           VAGPNGIDPMS+YSA  EINQLQWS++QPDWI +AF+NKMQLL+
Sbjct: 301 VAGPNGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLR 340

[Close]

BLAST of CmaCh16G000160 vs. Swiss-Prot
Match: LWD1_ARATH (WD repeat-containing protein LWD1 OS=Arabidopsis thaliana GN=LWD1 PE=2 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 5.9e-113
Identity = 204/336 (60.71%), Postives = 255/336 (75.89%), Query Frame = 1


Query: 7   RSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQT 66
           RSE   TY++P  +YAM  S      R+   R+A+ S +EQ  NRV+IV  D  +  I++
Sbjct: 18  RSEIY-TYEAPWHIYAMNWSVR----RDKKYRLAITSLLEQYPNRVEIVQLDESNGEIRS 77

Query: 67  HPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGD--SSIEPLSVLNNS 126
            P+LSF+HPYPPTK +F P+         D+LA+S D+LRLW++ D  S +E  S LN++
Sbjct: 78  DPNLSFEHPYPPTKTIFIPDKECQ---RPDLLATSSDFLRLWRIADDHSRVELKSCLNSN 137

Query: 127 KTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEA 186
           K SEFC PLTSFDWNE EP+RIGTSS DTTCTIWDIE+  V+TQ IAHDKEV+DIAWG  
Sbjct: 138 KNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGV 197

Query: 187 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDSNKVV 246
            VFASVSADGSVR+FDLRDKEHSTIIYES +PD+PL+RL WNKQD RYMATI+MDS KVV
Sbjct: 198 GVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVV 257

Query: 247 ILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNGID 306
           +LDIR P++PV EL+RH +SVNAIAWAP S  HIC+AGDD QALIW++  +      G+D
Sbjct: 258 VLDIRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQHVEGGLD 317

Query: 307 PMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           P+  Y+A  EI QLQWS++QPDW+A+AFS K+Q+L+
Sbjct: 318 PILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 345

[Close]

BLAST of CmaCh16G000160 vs. Swiss-Prot
Match: LWD2_ARATH (WD repeat-containing protein LWD2 OS=Arabidopsis thaliana GN=LWD2 PE=2 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 9.4e-111
Identity = 200/336 (59.52%), Postives = 252/336 (75.00%), Query Frame = 1


Query: 7   RSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQT 66
           RSE   TY++P  +YAM  S      R+   R+A+ S IEQ  NRV+IV  D  +  I++
Sbjct: 18  RSEIY-TYEAPWQIYAMNWSIR----RDKKYRLAITSLIEQYPNRVEIVQLDESNGEIRS 77

Query: 67  HPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGD--SSIEPLSVLNNS 126
            P+L F+HPYPPTK  F P+         D+LA+S D+LRLW++ D  S +E  S L++ 
Sbjct: 78  DPNLCFEHPYPPTKTSFIPDKECQ---RPDLLATSSDFLRLWRISDDESRVELKSCLSSD 137

Query: 127 KTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEA 186
           K SEF  P+TSFDWNE EP+RIGTSSIDTTCTIWDIE+ VV+TQ IAHDKEVYDIAWG  
Sbjct: 138 KNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWGGV 197

Query: 187 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDSNKVV 246
            VFASVS DGSVR+FDLRDKEHSTIIYES +P +PL+RL+WNKQD RYMAT++M S K+V
Sbjct: 198 GVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAKIV 257

Query: 247 ILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNGID 306
           +LDIR P++PV EL+RH +SVNAIAWAP S  HICSAGDD QALIW++  +      G+D
Sbjct: 258 VLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHVEGGLD 317

Query: 307 PMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           P+  Y+A  E+ QLQWS++QPDW+A+AFSNK+Q+L+
Sbjct: 318 PILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILR 345

[Close]

BLAST of CmaCh16G000160 vs. Swiss-Prot
Match: DCAF7_DICDI (DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum GN=wdr68 PE=3 SV=2)

HSP 1 Score: 348.2 bits (892), Expect = 2.1e-94
Identity = 185/329 (56.23%), Postives = 235/329 (71.43%), Query Frame = 1


Query: 13  TYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQTHPSLSF 72
           TY+SP  +Y ++ SS      N P R+A+GSF+E  TNRVD++  + ++   +      F
Sbjct: 8   TYNSPWVIYGLSWSSRV----NRPFRLAIGSFLEDYTNRVDVIQLNEETDQFEV--VCGF 67

Query: 73  DHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDS--SIEPLSVLNNSKTSEFC 132
           +HPYPPTK M+ P+  S   N  D+LA++GDYLRLW+VG +  SI+  S+L N   SEFC
Sbjct: 68  EHPYPPTKCMWIPDKNS---NRPDLLATTGDYLRLWEVGSNQRSIKLKSLLTNV-ISEFC 127

Query: 133 APLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEAR-VFAS 192
           APL+SFDWNE +P  + TSSIDTTCTIW+IE    +TQ IAHDKEV+DIA+     +FAS
Sbjct: 128 APLSSFDWNETDPSLLATSSIDTTCTIWNIETGQAKTQLIAHDKEVFDIAFARGTDLFAS 187

Query: 193 VSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDSNKVVILDIR 252
           V ADGS+R+FDLR+ EHSTIIYE+P    PLLRL WNKQD  Y+ATI  DS KV+ILDIR
Sbjct: 188 VGADGSLRMFDLRNLEHSTIIYETPS-FVPLLRLCWNKQDPNYLATIQQDSPKVIILDIR 247

Query: 253 SPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMYSA 312
            PSVP AEL  H S+VN I+WAP S  HIC+  DDKQALIW+L  +  P   DP+  Y+A
Sbjct: 248 VPSVPAAELVFHKSAVNGISWAPHSSCHICTVSDDKQALIWDLSSMPKPIE-DPLLTYNA 307

Query: 313 AHEINQLQWSAAQPDWIALAFSNKMQLLK 339
             EINQL WS++QPDWIA+AFS+ +Q+LK
Sbjct: 308 LAEINQLSWSSSQPDWIAIAFSSHLQILK 324

[Close]

BLAST of CmaCh16G000160 vs. Swiss-Prot
Match: DCAF7_HUMAN (DDB1- and CUL4-associated factor 7 OS=Homo sapiens GN=DCAF7 PE=1 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.6e-89
Identity = 178/341 (52.20%), Postives = 228/341 (66.86%), Query Frame = 1


Query: 14  YDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQTHPSLSFD 73
           Y++P  +YAM  S      + F  R+ALGSF+E+  N+V +V  D +S       +  FD
Sbjct: 13  YEAPWTVYAMNWSVRP--DKRF--RLALGSFVEEYNNKVQLVGLDEESSEFICRNT--FD 72

Query: 74  HPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSVLNNSKTSEFCAPL 133
           HPYP TKLM+ P+         D+LA+SGDYLR+W+VG++      +LNN+K S+FCAPL
Sbjct: 73  HPYPTTKLMWIPDTKGVY---PDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPL 132

Query: 134 TSFDWNEVEPKRIGTSSIDTTCTIWDIE-----------KSVVETQFIAHDKEVYDIAWG 193
           TSFDWNEV+P  +GTSSIDTTCTIW +E              V+TQ IAHDKEVYDIA+ 
Sbjct: 133 TSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFS 192

Query: 194 EA----RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILM 253
            A     +FASV ADGSVR+FDLR  EHSTIIYE PQ   PLLRL WNKQD  Y+AT+ M
Sbjct: 193 RAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQ-HHPLLRLCWNKQDPNYLATMAM 252

Query: 254 DSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGP 313
           D  +VVILD+R P  PVA L  H + VN IAWAP S  HIC+A DD QALIW++  +  P
Sbjct: 253 DGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQM--P 312

Query: 314 NGI-DPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
             I DP+  Y+A  EIN +QW++ QPDWIA+ ++N +++L+
Sbjct: 313 RAIEDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILR 341

[Close]

BLAST of CmaCh16G000160 vs. TrEMBL
Match: B7SBL6_CUCSA (WD-repeat protein OS=Cucumis sativus GN=TTG1 PE=2 SV=1)

HSP 1 Score: 618.2 bits (1593), Expect = 1.2e-173
Identity = 303/338 (89.64%), Postives = 320/338 (94.67%), Query Frame = 1


Query: 1   MANAAPRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPD 60
           M +AA RSEF+ATY+SPHPLYAMAISS H HS NF +RIALGSF+E+  NRVDIVSFDPD
Sbjct: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120
           S+SI+ +PSLSF+HPYPPTKLMFNP+ LSSL      LASSGD LRLW++GDSSIEPLS+
Sbjct: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSL------LASSGDSLRLWKLGDSSIEPLSL 120

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180

Query: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPD+PLLRLAWNKQDLRYMATILMDS
Sbjct: 181 WGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240

Query: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NK+VILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 241 NKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300

Query: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           IDPMSMYSAA EINQLQWSAAQPDWIALAFSNKMQLLK
Sbjct: 301 IDPMSMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLK 332

[Close]

BLAST of CmaCh16G000160 vs. TrEMBL
Match: Q9M610_MALDO (TTG1 OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 9.9e-160
Identity = 273/332 (82.23%), Postives = 308/332 (92.77%), Query Frame = 1


Query: 7   RSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQT 66
           R+E   TY+SP+PLYAMA +S  T +R+  +RIA+GSFIE+ +NRVDI+SFDPD+LSI+ 
Sbjct: 11  RAENSVTYESPYPLYAMAFASPQTRTRHQHHRIAVGSFIEEYSNRVDILSFDPDTLSIKP 70

Query: 67  HPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSVLNNSKT 126
           +P+LSFDHPYPPTKLMF+PN  ++L  ++D+LASSGDYLRLW+VGDS++EP+ VLNNSKT
Sbjct: 71  NPTLSFDHPYPPTKLMFHPNP-NALHKTNDVLASSGDYLRLWEVGDSTVEPIQVLNNSKT 130

Query: 127 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 186
           SEFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEVYDIAWGEARV
Sbjct: 131 SEFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVYDIAWGEARV 190

Query: 187 FASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDSNKVVIL 246
           FASVSADGSVRIFDLRDKEHSTIIYESPQPD+PLLRLAWNKQDLRYMATILMDSNKVVIL
Sbjct: 191 FASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVIL 250

Query: 247 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 306
           DIRSP++PVAELERH  SVNAIAWAP+SCRHICSAGDD QALIW+LP VAGPNGIDPMSM
Sbjct: 251 DIRSPTMPVAELERHRGSVNAIAWAPQSCRHICSAGDDTQALIWDLPTVAGPNGIDPMSM 310

Query: 307 YSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           YSA  EINQLQWSAAQPDWI++AFSNKMQLLK
Sbjct: 311 YSAGAEINQLQWSAAQPDWISIAFSNKMQLLK 341

[Close]

BLAST of CmaCh16G000160 vs. TrEMBL
Match: M5X1V3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008187mg PE=4 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 9.9e-160
Identity = 278/342 (81.29%), Postives = 311/342 (90.94%), Query Frame = 1


Query: 1   MANAAPRS----EFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVS 60
           M N+A  S    E   TY+SP+PLYAMA S + T +R+  +RIA+GSFIE+ +NRVDI+S
Sbjct: 1   MENSAQESHLGQENSVTYESPYPLYAMAFSPSQTRNRHQHHRIAVGSFIEEYSNRVDILS 60

Query: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIE 120
           FDPD+LS++ +P+LSFDHPYPPTKLMF+PN  +SL  S+D+LASSGDYLRLW+V DSS+E
Sbjct: 61  FDPDTLSVKPNPTLSFDHPYPPTKLMFHPNP-NSLHKSNDVLASSGDYLRLWEVRDSSVE 120

Query: 121 PLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEV 180
           P+ VLNNSKTSEFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEV
Sbjct: 121 PIQVLNNSKTSEFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEV 180

Query: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATI 240
           YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPD+PLLRLAWNKQDLRYMATI
Sbjct: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 240

Query: 241 LMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVA 300
           LMDSNKVVILDIRSP++PVAELERH +SVNAIAWAP+SCRHICSAGDD QALIWELP VA
Sbjct: 241 LMDSNKVVILDIRSPTMPVAELERHRASVNAIAWAPQSCRHICSAGDDTQALIWELPTVA 300

Query: 301 GPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           GPNGIDPMSMYSA  EINQLQWSAAQPDWI++AFSNKMQLLK
Sbjct: 301 GPNGIDPMSMYSAGAEINQLQWSAAQPDWISIAFSNKMQLLK 341

[Close]

BLAST of CmaCh16G000160 vs. TrEMBL
Match: A0A0A0R9P9_PAESU (WD40 protein OS=Paeonia suffruticosa GN=WD40-2 PE=2 SV=1)

HSP 1 Score: 571.6 bits (1472), Expect = 1.3e-159
Identity = 277/331 (83.69%), Postives = 304/331 (91.84%), Query Frame = 1


Query: 8   SEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQTH 67
           SE + TYDSPHPLYAMA SS+ + +    +RIA+GSFIE+  NRVDIVSFD ++L+I+T+
Sbjct: 12  SENLVTYDSPHPLYAMAFSSSPSRTHLHHHRIAVGSFIEEFNNRVDIVSFDDETLTIKTN 71

Query: 68  PSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSVLNNSKTS 127
           P+LSF+HPYPPTKLMF PN+ SSLR SSD+LASSGDYLRLW+V D+SIEPLSVLNNSKTS
Sbjct: 72  PNLSFEHPYPPTKLMFQPNSASSLRKSSDLLASSGDYLRLWEVRDNSIEPLSVLNNSKTS 131

Query: 128 EFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVF 187
           EFCAPLTSFDWNEVEP+RIGTSSIDTTCTIWD+E+ VVETQ IAHDKEVYDIAW EA VF
Sbjct: 132 EFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDVERGVVETQLIAHDKEVYDIAWCEAGVF 191

Query: 188 ASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDSNKVVILD 247
           ASVSADGSVRIFDLRDKEHSTIIYES QPD+PLLRLAWNKQDLRYMATILMDSNKVVILD
Sbjct: 192 ASVSADGSVRIFDLRDKEHSTIIYESSQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD 251

Query: 248 IRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMY 307
           IRSP++PVAELERH SSVNAIAWAP+SCRHICSAGDD QALIWELP VAGPNGIDPMSMY
Sbjct: 252 IRSPTMPVAELERHRSSVNAIAWAPQSCRHICSAGDDTQALIWELPTVAGPNGIDPMSMY 311

Query: 308 SAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           SA  EINQLQWSA QPDWIA+AF+NKMQLLK
Sbjct: 312 SAGSEINQLQWSAVQPDWIAIAFANKMQLLK 342

[Close]

BLAST of CmaCh16G000160 vs. TrEMBL
Match: X2EXM4_9ROSA (TTG1 protein OS=Malus hybrid cultivar GN=TTG1 PE=2 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 1.7e-159
Identity = 272/332 (81.93%), Postives = 308/332 (92.77%), Query Frame = 1


Query: 7   RSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQT 66
           R+E   TY+SP+PLYAMA++S  T +R+  +RIA+GSFIE+ +NRVDI+SFDPD+LSI+ 
Sbjct: 11  RAENSVTYESPYPLYAMALASPQTRTRHQHHRIAVGSFIEEYSNRVDILSFDPDTLSIKP 70

Query: 67  HPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSVLNNSKT 126
           +P+LSFDHPYPPTKLMF+PN  ++L  ++D+LASSGDYLRLW+VGDS++EP+ VLNNSKT
Sbjct: 71  NPTLSFDHPYPPTKLMFHPNP-NALHKTNDVLASSGDYLRLWEVGDSTVEPIQVLNNSKT 130

Query: 127 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 186
           SEFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEVYDIAWGEARV
Sbjct: 131 SEFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVYDIAWGEARV 190

Query: 187 FASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDSNKVVIL 246
           FASVSADGSVRIFDLRDKEHSTIIYESPQPD+PLLRLAWNKQDLRYMATILMDSNKVVIL
Sbjct: 191 FASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVIL 250

Query: 247 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 306
           DIRSP++PVAELERH  SVNAIAWAP+SCRHICS GDD QALIW+LP VAGPNGIDPMSM
Sbjct: 251 DIRSPTMPVAELERHRGSVNAIAWAPQSCRHICSGGDDTQALIWDLPTVAGPNGIDPMSM 310

Query: 307 YSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           YSA  EINQLQWSAAQPDWI++AFSNKMQLLK
Sbjct: 311 YSAGAEINQLQWSAAQPDWISIAFSNKMQLLK 341

[Close]

BLAST of CmaCh16G000160 vs. TAIR10
Match: AT5G24520.1 (AT5G24520.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 539.3 bits (1388), Expect = 3.6e-153
Identity = 264/344 (76.74%), Postives = 304/344 (88.37%), Query Frame = 1


Query: 1   MANAAP----RSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVS 60
           M N+AP    RSE   TYDSP+PLYAMA SS  + S +   RIA+GSF+E   NR+DI+S
Sbjct: 1   MDNSAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSSGH---RIAVGSFLEDYNNRIDILS 60

Query: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGD--SS 120
           FD DS++++  P+LSF+HPYPPTKLMF+P +L    +S D+LASSGD+LRLW++ +  S+
Sbjct: 61  FDSDSMTVKPLPNLSFEHPYPPTKLMFSPPSLRR-PSSGDLLASSGDFLRLWEINEDSST 120

Query: 121 IEPLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDK 180
           +EP+SVLNNSKTSEFCAPLTSFDWN+VEPKR+GT SIDTTCTIWDIEKSVVETQ IAHDK
Sbjct: 121 VEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDK 180

Query: 181 EVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMA 240
           EV+DIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPD+PLLRLAWNKQDLRYMA
Sbjct: 181 EVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMA 240

Query: 241 TILMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPM 300
           TILMDSNKVVILDIRSP++PVAELERH +SVNAIAWAP+SC+HICS GDD QALIWELP 
Sbjct: 241 TILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPT 300

Query: 301 VAGPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           VAGPNGIDPMS+YSA  EINQLQWS++QPDWI +AF+NKMQLL+
Sbjct: 301 VAGPNGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLR 340

[Close]

BLAST of CmaCh16G000160 vs. TAIR10
Match: AT1G12910.1 (AT1G12910.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 409.8 bits (1052), Expect = 3.3e-114
Identity = 204/336 (60.71%), Postives = 255/336 (75.89%), Query Frame = 1


Query: 7   RSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQT 66
           RSE   TY++P  +YAM  S      R+   R+A+ S +EQ  NRV+IV  D  +  I++
Sbjct: 18  RSEIY-TYEAPWHIYAMNWSVR----RDKKYRLAITSLLEQYPNRVEIVQLDESNGEIRS 77

Query: 67  HPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGD--SSIEPLSVLNNS 126
            P+LSF+HPYPPTK +F P+         D+LA+S D+LRLW++ D  S +E  S LN++
Sbjct: 78  DPNLSFEHPYPPTKTIFIPDKECQ---RPDLLATSSDFLRLWRIADDHSRVELKSCLNSN 137

Query: 127 KTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEA 186
           K SEFC PLTSFDWNE EP+RIGTSS DTTCTIWDIE+  V+TQ IAHDKEV+DIAWG  
Sbjct: 138 KNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGV 197

Query: 187 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDSNKVV 246
            VFASVSADGSVR+FDLRDKEHSTIIYES +PD+PL+RL WNKQD RYMATI+MDS KVV
Sbjct: 198 GVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVV 257

Query: 247 ILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNGID 306
           +LDIR P++PV EL+RH +SVNAIAWAP S  HIC+AGDD QALIW++  +      G+D
Sbjct: 258 VLDIRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQHVEGGLD 317

Query: 307 PMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           P+  Y+A  EI QLQWS++QPDW+A+AFS K+Q+L+
Sbjct: 318 PILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 345

[Close]

BLAST of CmaCh16G000160 vs. TAIR10
Match: AT3G26640.1 (AT3G26640.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 402.5 bits (1033), Expect = 5.3e-112
Identity = 200/336 (59.52%), Postives = 252/336 (75.00%), Query Frame = 1


Query: 7   RSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQT 66
           RSE   TY++P  +YAM  S      R+   R+A+ S IEQ  NRV+IV  D  +  I++
Sbjct: 18  RSEIY-TYEAPWQIYAMNWSIR----RDKKYRLAITSLIEQYPNRVEIVQLDESNGEIRS 77

Query: 67  HPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGD--SSIEPLSVLNNS 126
            P+L F+HPYPPTK  F P+         D+LA+S D+LRLW++ D  S +E  S L++ 
Sbjct: 78  DPNLCFEHPYPPTKTSFIPDKECQ---RPDLLATSSDFLRLWRISDDESRVELKSCLSSD 137

Query: 127 KTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEA 186
           K SEF  P+TSFDWNE EP+RIGTSSIDTTCTIWDIE+ VV+TQ IAHDKEVYDIAWG  
Sbjct: 138 KNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWGGV 197

Query: 187 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDSNKVV 246
            VFASVS DGSVR+FDLRDKEHSTIIYES +P +PL+RL+WNKQD RYMAT++M S K+V
Sbjct: 198 GVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAKIV 257

Query: 247 ILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNGID 306
           +LDIR P++PV EL+RH +SVNAIAWAP S  HICSAGDD QALIW++  +      G+D
Sbjct: 258 VLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHVEGGLD 317

Query: 307 PMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           P+  Y+A  E+ QLQWS++QPDW+A+AFSNK+Q+L+
Sbjct: 318 PILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILR 345

[Close]

BLAST of CmaCh16G000160 vs. TAIR10
Match: AT5G24490.1 (AT5G24490.1 30S ribosomal protein, putative)

HSP 1 Score: 345.1 bits (884), Expect = 1.0e-94
Identity = 195/304 (64.14%), Postives = 229/304 (75.33%), Query Frame = 1


Query: 406 TPSSSSSSSTVSTFPTSFSLPTSTNSAVLKIHALSSHASAFFNSCNHCFRTIVIAPRKRH 465
           TP  SSSS+ VS    +      T+S  L+        S F     +  R  V   R  +
Sbjct: 21  TPPCSSSSTVVSMVGLN-----RTDSKKLR--------SDFLGQIGYEDRRQV---RHSY 80

Query: 466 ATRSFSIRMSWDGPLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLS 525
              S +++MSWDGPL+SVKLI+QGKNLEL+E +K+HVEEKVGK+VQKHSHLVREVDVRLS
Sbjct: 81  CRSSLAVKMSWDGPLASVKLIIQGKNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLS 140

Query: 526 VRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIMQRKLRKIKEKDSD 585
           VRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYA IDLVS+I+QRKLRKIKEKDSD
Sbjct: 141 VRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSD 200

Query: 586 HGRHMKGFDRSKIREPA-PIVVEDEEEEV-----SQEDGGEAIDEIVRTKYFDMPPLTVE 645
           HGRHMKGF+R K+REP    VVED E+        +E+  + I EIVRTK F+MPPLTV 
Sbjct: 201 HGRHMKGFNRLKVREPVIEPVVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVA 260

Query: 646 EAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGNAEKIETVTVEVAREA 704
           EA+EQL+ + HDFYGF+NEETGEINI+YKRK+GGYGLIIPK++G AEK+E +  E   E 
Sbjct: 261 EAVEQLELVSHDFYGFQNEETGEINIVYKRKEGGYGLIIPKKDGKAEKVEPLPTEQLNEH 308

[Close]

BLAST of CmaCh16G000160 vs. TAIR10
Match: AT1G29260.1 (AT1G29260.1 peroxin 7)

HSP 1 Score: 79.0 bits (193), Expect = 1.3e-14
Identity = 60/201 (29.85%), Postives = 91/201 (45.27%), Query Frame = 1


Query: 99  ASSGDYLRLWQVGDSSIE----PLSVLNNSKTS--EFCAPLTSFDWNEVEPKRIGTSSID 158
           + S D + +  +GD S++     L   +N   S  E    + S D+N        TSS D
Sbjct: 69  SESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSFLTSSWD 128

Query: 159 TTCTIWDIEKSVVETQFIAHDKEVYDIAWGEAR--VFASVSADGSVRIFDLRDKEHSTII 218
            T  +W +++      F  H   VY   W      VFAS S D ++RI+D+R+   + II
Sbjct: 129 DTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMII 188

Query: 219 YESPQPDSPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPSVPVAELERHHSSVNAIAW 278
              P  D  +L   WNK D   +AT  +D   V + D+RS  VP+A L  H  +V  + +
Sbjct: 189 ---PAHDFEILSCDWNKYDDCILATSSVDKT-VKVWDVRSYRVPLAVLNGHGYAVRKVKF 248

Query: 279 APRSCRHICSAGDDKQALIWE 292
           +P     I S   D    +W+
Sbjct: 249 SPHRRSLIASCSYDMSVCLWD 265

[Close]

BLAST of CmaCh16G000160 vs. NCBI nr
Match: gi|659111171|ref|XP_008455615.1| (PREDICTED: protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo])

HSP 1 Score: 619.8 bits (1597), Expect = 6.0e-174
Identity = 306/338 (90.53%), Postives = 320/338 (94.67%), Query Frame = 1


Query: 1   MANAAPRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPD 60
           M NAA RSEF+ATYDSPHPLYAMAISS H HS NF +RIALGSF+E+  NRVDIVSFDPD
Sbjct: 1   MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120
           S+SI+T+PSLSF+HPYPPTKLMFNP+ LSSL      LASSGD LRLW+VGDSSIEPLS+
Sbjct: 61  SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSL------LASSGDSLRLWKVGDSSIEPLSL 120

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 121 LNNSKTSEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180

Query: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPD+PLLRLAWNKQDLRYMATILMDS
Sbjct: 181 WGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240

Query: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NK+VILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 241 NKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300

Query: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           IDPMSMYSAA EINQLQWSAAQPDWIALAFSNKMQLLK
Sbjct: 301 IDPMSMYSAACEINQLQWSAAQPDWIALAFSNKMQLLK 332

[Close]

BLAST of CmaCh16G000160 vs. NCBI nr
Match: gi|525507294|ref|NP_001267687.1| (protein TRANSPARENT TESTA GLABRA 1-like [Cucumis sativus])

HSP 1 Score: 618.2 bits (1593), Expect = 1.7e-173
Identity = 303/338 (89.64%), Postives = 320/338 (94.67%), Query Frame = 1


Query: 1   MANAAPRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPD 60
           M +AA RSEF+ATY+SPHPLYAMAISS H HS NF +RIALGSF+E+  NRVDIVSFDPD
Sbjct: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120
           S+SI+ +PSLSF+HPYPPTKLMFNP+ LSSL      LASSGD LRLW++GDSSIEPLS+
Sbjct: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSL------LASSGDSLRLWKLGDSSIEPLSL 120

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180

Query: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPD+PLLRLAWNKQDLRYMATILMDS
Sbjct: 181 WGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240

Query: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NK+VILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 241 NKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300

Query: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           IDPMSMYSAA EINQLQWSAAQPDWIALAFSNKMQLLK
Sbjct: 301 IDPMSMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLK 332

[Close]

BLAST of CmaCh16G000160 vs. NCBI nr
Match: gi|645257918|ref|XP_008234636.1| (PREDICTED: protein TRANSPARENT TESTA GLABRA 1 isoform X1 [Prunus mume])

HSP 1 Score: 572.8 bits (1475), Expect = 8.4e-160
Identity = 279/343 (81.34%), Postives = 311/343 (90.67%), Query Frame = 1


Query: 1   MANAAPRS----EFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVS 60
           M N+A  S    E   TY+SP+PLYAMA S   T +R+  +RIA+GSFIE+ +NRVDI+S
Sbjct: 1   MENSAQESHLGQENSVTYESPYPLYAMAFSPPQTRNRHQHHRIAVGSFIEEYSNRVDILS 60

Query: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIE 120
           FDPD+LS++ +P+LSFDHPYPPTKLMF+PN  +SL  S+D+LASSGDYLRLW+V DSS+E
Sbjct: 61  FDPDTLSVKPNPTLSFDHPYPPTKLMFHPNP-NSLHKSNDVLASSGDYLRLWEVRDSSVE 120

Query: 121 PLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEV 180
           P+ VLNNSKTSEFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEV
Sbjct: 121 PIQVLNNSKTSEFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEV 180

Query: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATI 240
           YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPD+PLLRLAWNKQDLRYMATI
Sbjct: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 240

Query: 241 LMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVA 300
           LMDSNKVVILDIRSP++PVAELERH +SVNAIAWAP+SCRHICSAGDD QALIWELP VA
Sbjct: 241 LMDSNKVVILDIRSPTMPVAELERHRASVNAIAWAPQSCRHICSAGDDTQALIWELPTVA 300

Query: 301 GPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKA 340
           GPNGIDPMSMYSA  EINQLQWSAAQPDWI++AFSNKMQLLKA
Sbjct: 301 GPNGIDPMSMYSAGAEINQLQWSAAQPDWISIAFSNKMQLLKA 342

[Close]

BLAST of CmaCh16G000160 vs. NCBI nr
Match: gi|658016927|ref|XP_008343816.1| (PREDICTED: protein TRANSPARENT TESTA GLABRA 1-like [Malus domestica])

HSP 1 Score: 572.0 bits (1473), Expect = 1.4e-159
Identity = 273/332 (82.23%), Postives = 308/332 (92.77%), Query Frame = 1


Query: 7   RSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQT 66
           R+E   TY+SP+PLYAMA +S  T +R+  +RIA+GSFIE+ +NRVDI+SFDPD+LSI+ 
Sbjct: 11  RAENSVTYESPYPLYAMAFASPQTRTRHQHHRIAVGSFIEEYSNRVDILSFDPDTLSIKP 70

Query: 67  HPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSVLNNSKT 126
           +P+LSFDHPYPPTKLMF+PN  ++L  ++D+LASSGDYLRLW+VGDS++EP+ VLNNSKT
Sbjct: 71  NPTLSFDHPYPPTKLMFHPNP-NALHKTNDVLASSGDYLRLWEVGDSTVEPIQVLNNSKT 130

Query: 127 SEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARV 186
           SEFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEVYDIAWGEARV
Sbjct: 131 SEFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVYDIAWGEARV 190

Query: 187 FASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDSNKVVIL 246
           FASVSADGSVRIFDLRDKEHSTIIYESPQPD+PLLRLAWNKQDLRYMATILMDSNKVVIL
Sbjct: 191 FASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVIL 250

Query: 247 DIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSM 306
           DIRSP++PVAELERH  SVNAIAWAP+SCRHICSAGDD QALIW+LP VAGPNGIDPMSM
Sbjct: 251 DIRSPTMPVAELERHRGSVNAIAWAPQSCRHICSAGDDTQALIWDLPTVAGPNGIDPMSM 310

Query: 307 YSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           YSA  EINQLQWSAAQPDWI++AFSNKMQLLK
Sbjct: 311 YSAGAEINQLQWSAAQPDWISIAFSNKMQLLK 341

[Close]

BLAST of CmaCh16G000160 vs. NCBI nr
Match: gi|596003551|ref|XP_007218262.1| (hypothetical protein PRUPE_ppa008187mg [Prunus persica])

HSP 1 Score: 572.0 bits (1473), Expect = 1.4e-159
Identity = 278/342 (81.29%), Postives = 311/342 (90.94%), Query Frame = 1


Query: 1   MANAAPRS----EFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVS 60
           M N+A  S    E   TY+SP+PLYAMA S + T +R+  +RIA+GSFIE+ +NRVDI+S
Sbjct: 1   MENSAQESHLGQENSVTYESPYPLYAMAFSPSQTRNRHQHHRIAVGSFIEEYSNRVDILS 60

Query: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIE 120
           FDPD+LS++ +P+LSFDHPYPPTKLMF+PN  +SL  S+D+LASSGDYLRLW+V DSS+E
Sbjct: 61  FDPDTLSVKPNPTLSFDHPYPPTKLMFHPNP-NSLHKSNDVLASSGDYLRLWEVRDSSVE 120

Query: 121 PLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEV 180
           P+ VLNNSKTSEFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEV
Sbjct: 121 PIQVLNNSKTSEFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEV 180

Query: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATI 240
           YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPD+PLLRLAWNKQDLRYMATI
Sbjct: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 240

Query: 241 LMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVA 300
           LMDSNKVVILDIRSP++PVAELERH +SVNAIAWAP+SCRHICSAGDD QALIWELP VA
Sbjct: 241 LMDSNKVVILDIRSPTMPVAELERHRASVNAIAWAPQSCRHICSAGDDTQALIWELPTVA 300

Query: 301 GPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLK 339
           GPNGIDPMSMYSA  EINQLQWSAAQPDWI++AFSNKMQLLK
Sbjct: 301 GPNGIDPMSMYSAGAEINQLQWSAAQPDWISIAFSNKMQLLK 341

The following BLAST results are available for this feature:

BLAST of CmaCh16G000160 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TTG1_ARATH	6.4e-152	76.74	Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana GN=TTG1 PE=1 SV=1	[more]
LWD1_ARATH	5.9e-113	60.71	WD repeat-containing protein LWD1 OS=Arabidopsis thaliana GN=LWD1 PE=2 SV=1	[more]
LWD2_ARATH	9.4e-111	59.52	WD repeat-containing protein LWD2 OS=Arabidopsis thaliana GN=LWD2 PE=2 SV=1	[more]
DCAF7_DICDI	2.1e-94	56.23	DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum GN=wdr68 ...	[more]
DCAF7_HUMAN	1.6e-89	52.20	DDB1- and CUL4-associated factor 7 OS=Homo sapiens GN=DCAF7 PE=1 SV=1	[more]

BLAST of CmaCh16G000160 vs. TrEMBL


Match Name	E-value	Identity	Description
B7SBL6_CUCSA	1.2e-173	89.64	WD-repeat protein OS=Cucumis sativus GN=TTG1 PE=2 SV=1	[more]
Q9M610_MALDO	9.9e-160	82.23	TTG1 OS=Malus domestica PE=2 SV=1	[more]
M5X1V3_PRUPE	9.9e-160	81.29	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008187mg PE=4 SV=1	[more]
A0A0A0R9P9_PAESU	1.3e-159	83.69	WD40 protein OS=Paeonia suffruticosa GN=WD40-2 PE=2 SV=1	[more]
X2EXM4_9ROSA	1.7e-159	81.93	TTG1 protein OS=Malus hybrid cultivar GN=TTG1 PE=2 SV=1	[more]

BLAST of CmaCh16G000160 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G24520.1	3.6e-153	76.74	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G12910.1	3.3e-114	60.71	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G26640.1	5.3e-112	59.52	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G24490.1	1.0e-94	64.14	30S ribosomal protein, putative	[more]
AT1G29260.1	1.3e-14	29.85	peroxin 7	[more]

BLAST of CmaCh16G000160 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659111171\|ref\|XP_008455615.1\|	6.0e-174	90.53	PREDICTED: protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo]	[more]
gi\|525507294\|ref\|NP_001267687.1\|	1.7e-173	89.64	protein TRANSPARENT TESTA GLABRA 1-like [Cucumis sativus]	[more]
gi\|645257918\|ref\|XP_008234636.1\|	8.4e-160	81.34	PREDICTED: protein TRANSPARENT TESTA GLABRA 1 isoform X1 [Prunus mume]	[more]
gi\|658016927\|ref\|XP_008343816.1\|	1.4e-159	82.23	PREDICTED: protein TRANSPARENT TESTA GLABRA 1-like [Malus domestica]	[more]
gi\|596003551\|ref\|XP_007218262.1\|	1.4e-159	81.29	hypothetical protein PRUPE_ppa008187mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_repeat
IPR003489	RHF/RaiA
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR017986	WD40_repeat_dom
IPR019775	WD40_repeat_CS

Vocabulary: **Biological Process**
Term	Definition
GO:0007275	multicellular organism development
GO:0044238	primary metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009957	epidermal cell fate specification
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0044238	primary metabolic process
biological_process	GO:0032880	regulation of protein localization
biological_process	GO:0010026	trichome differentiation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G000160.1	CmaCh16G000160.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 255..290 score:
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 114..159 score: 0.79coord: 251..291 score: 1.2E-5coord: 65..109 score: 20.0coord: 162..200 score: 1.
IPR001680	WD40 repeat	PROFILE	PS50082	WD_REPEATS_2	coord: 169..209 score: 9.439coord: 258..292 score:
IPR003489	Ribosomal protein S30Ae/sigma 54 modulation protein	GENE3D	G3DSA:3.30.160.100		coord: 484..582 score: 2.7
IPR003489	Ribosomal protein S30Ae/sigma 54 modulation protein	PFAM	PF02482	Ribosomal_S30AE	coord: 486..582 score: 1.1
IPR003489	Ribosomal protein S30Ae/sigma 54 modulation protein	TIGRFAMs	TIGR00741	TIGR00741	coord: 484..587 score: 2.9
IPR003489	Ribosomal protein S30Ae/sigma 54 modulation protein	unknown	SSF69754	Ribosome binding protein Y (YfiA homologue)	coord: 484..589 score: 3.14
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	G3DSA:2.130.10.10		coord: 67..332 score: 2.8
IPR017986	WD40-repeat-containing domain	PROFILE	PS50294	WD_REPEATS_REGION	coord: 126..300 score: 13
IPR017986	WD40-repeat-containing domain	unknown	SSF50978	WD40 repeat-like	coord: 38..298 score: 3.66
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 146..160 score: -coord: 278..292 scor
None	No IPR available	PANTHER	PTHR19919	WD REPEAT CONTAINING PROTEIN	coord: 2..339 score: 2.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh16G000160	CmoCh16G000190	Cucurbita moschata (Rifu)	cmacmoB322
CmaCh16G000160	Cp4.1LG14g07030	Cucurbita pepo (Zucchini)	cmacpeB344
CmaCh16G000160	Carg15035	Silver-seed gourd	carcmaB1366

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh16G000160	Cucurbita pepo (Zucchini)	cmacpeB339
CmaCh16G000160	Bottle gourd (USVL1VR-Ls)	cmalsiB330
CmaCh16G000160	Cucumber (Gy14) v2	cgybcmaB501
CmaCh16G000160	Silver-seed gourd	carcmaB0752
CmaCh16G000160	Cucumber (Chinese Long) v3	cmacucB0395
CmaCh16G000160	Cucurbita maxima (Rimu)	cmacmaB338
CmaCh16G000160	Cucumber (Gy14) v1	cgycmaB0760
CmaCh16G000160	Cucurbita moschata (Rifu)	cmacmoB327
CmaCh16G000160	Wild cucumber (PI 183967)	cmacpiB344
CmaCh16G000160	Cucumber (Chinese Long) v2	cmacuB339