Carg15035 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15035
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	WD-repeat protein
Location	Cucurbita_argyrosperma_scaffold_078 : 229838 .. 230857 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAACGCCGCCCCAAGATCCGAATTCATGGCCACCTACGATTCCCCGCACCCTCTCTATGCCATGGCCATCTCTTCCGCCCACACCCACTCTCGCACTTTCCCCAATCGCATAGCCCTTGGTAGCTTCATCGAACAGTGCACCAACCGTGTCGACATTGTGTCTTTTGATCCAGATTCCCTCTCCATTCAAACGCATCCTTCTCTCTCCTTCGACCACCCCTACCCACCCACCAAGCTCATGTTCAATCCCAATGCCCTCTCCTCTCTCCGCAACTCCTCCGACATCTTGGCCTCCTCCGGCGACTATCTCCGCCTCTGGCAAGTTGGAGATTCTTCTATCGAACCCCTCTCTGTCCTCAACAACAGCAAAACCAGTGAATTCTGCGCCCCCTTAACTTCCTTCGACTGGAATGAAGTCGAGCCCAAGAGAATTGGAACCTCCAGCATTGATACCACTTGTACTATTTGGGATATTGAGAAGAGCGTGGTTGAAACCCAGTTCATAGCTCACGACAAAGAGGTTTATGACATTGCGTGGGGGGAAGCCCGGGTTTTTGCCTCCGTTTCCGCTGATGGGTCGGTCAGGATTTTCGACTTGAGAGATAAAGAGCACTCCACCATTATATACGAAAGCCCCCAACCCGATACCCCTTTGCTTAGACTGGCTTGGAACAAGCAGGACCTGCGGTACATGGCCACAATTTTGATGGACAGCAACAAAGTTGTTATTTTGGACATTCGCTCGCCAAGTGTGCCGGTTGCTGAGCTGGAGAGGCATCATTCCAGTGTCAATGCCATTGCCTGGGCTCCACGGAGCTGCAGACATATTTGCTCCGCTGGGGATGACAAACAGGCGCTTATTTGGGAGTTGCCAATGGTTGCAGGCCCGAATGGCATTGATCCAATGTCCATGTATTCTGCTGCACATGAAATTAACCAGTTGCAGTGGTCCGCCGCCCAGCCTGATTGGATTGCTCTGGCGTTTTCTAACAAGATGCAGCTTTTGAAAGTTTGA

mRNA sequence

ATGGAAAACGCCGCCCCAAGATCCGAATTCATGGCCACCTACGATTCCCCGCACCCTCTCTATGCCATGGCCATCTCTTCCGCCCACACCCACTCTCGCACTTTCCCCAATCGCATAGCCCTTGGTAGCTTCATCGAACAGTGCACCAACCGTGTCGACATTGTGTCTTTTGATCCAGATTCCCTCTCCATTCAAACGCATCCTTCTCTCTCCTTCGACCACCCCTACCCACCCACCAAGCTCATGTTCAATCCCAATGCCCTCTCCTCTCTCCGCAACTCCTCCGACATCTTGGCCTCCTCCGGCGACTATCTCCGCCTCTGGCAAGTTGGAGATTCTTCTATCGAACCCCTCTCTGTCCTCAACAACAGCAAAACCAGTGAATTCTGCGCCCCCTTAACTTCCTTCGACTGGAATGAAGTCGAGCCCAAGAGAATTGGAACCTCCAGCATTGATACCACTTGTACTATTTGGGATATTGAGAAGAGCGTGGTTGAAACCCAGTTCATAGCTCACGACAAAGAGGTTTATGACATTGCGTGGGGGGAAGCCCGGGTTTTTGCCTCCGTTTCCGCTGATGGGTCGGTCAGGATTTTCGACTTGAGAGATAAAGAGCACTCCACCATTATATACGAAAGCCCCCAACCCGATACCCCTTTGCTTAGACTGGCTTGGAACAAGCAGGACCTGCGGTACATGGCCACAATTTTGATGGACAGCAACAAAGTTGTTATTTTGGACATTCGCTCGCCAAGTGTGCCGGTTGCTGAGCTGGAGAGGCATCATTCCAGTGTCAATGCCATTGCCTGGGCTCCACGGAGCTGCAGACATATTTGCTCCGCTGGGGATGACAAACAGGCGCTTATTTGGGAGTTGCCAATGGTTGCAGGCCCGAATGGCATTGATCCAATGTCCATGTATTCTGCTGCACATGAAATTAACCAGTTGCAGTGGTCCGCCGCCCAGCCTGATTGGATTGCTCTGGCGTTTTCTAACAAGATGCAGCTTTTGAAAGTTTGA

Coding sequence (CDS)

ATGGAAAACGCCGCCCCAAGATCCGAATTCATGGCCACCTACGATTCCCCGCACCCTCTCTATGCCATGGCCATCTCTTCCGCCCACACCCACTCTCGCACTTTCCCCAATCGCATAGCCCTTGGTAGCTTCATCGAACAGTGCACCAACCGTGTCGACATTGTGTCTTTTGATCCAGATTCCCTCTCCATTCAAACGCATCCTTCTCTCTCCTTCGACCACCCCTACCCACCCACCAAGCTCATGTTCAATCCCAATGCCCTCTCCTCTCTCCGCAACTCCTCCGACATCTTGGCCTCCTCCGGCGACTATCTCCGCCTCTGGCAAGTTGGAGATTCTTCTATCGAACCCCTCTCTGTCCTCAACAACAGCAAAACCAGTGAATTCTGCGCCCCCTTAACTTCCTTCGACTGGAATGAAGTCGAGCCCAAGAGAATTGGAACCTCCAGCATTGATACCACTTGTACTATTTGGGATATTGAGAAGAGCGTGGTTGAAACCCAGTTCATAGCTCACGACAAAGAGGTTTATGACATTGCGTGGGGGGAAGCCCGGGTTTTTGCCTCCGTTTCCGCTGATGGGTCGGTCAGGATTTTCGACTTGAGAGATAAAGAGCACTCCACCATTATATACGAAAGCCCCCAACCCGATACCCCTTTGCTTAGACTGGCTTGGAACAAGCAGGACCTGCGGTACATGGCCACAATTTTGATGGACAGCAACAAAGTTGTTATTTTGGACATTCGCTCGCCAAGTGTGCCGGTTGCTGAGCTGGAGAGGCATCATTCCAGTGTCAATGCCATTGCCTGGGCTCCACGGAGCTGCAGACATATTTGCTCCGCTGGGGATGACAAACAGGCGCTTATTTGGGAGTTGCCAATGGTTGCAGGCCCGAATGGCATTGATCCAATGTCCATGTATTCTGCTGCACATGAAATTAACCAGTTGCAGTGGTCCGCCGCCCAGCCTGATTGGATTGCTCTGGCGTTTTCTAACAAGATGCAGCTTTTGAAAGTTTGA

Protein sequence

MENAAPRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV

Homology

[Close]

BLAST of Carg15035 vs. NCBI nr
Match: XP_022922603.1 (protein TRANSPARENT TESTA GLABRA 1 [Cucurbita moschata])

HSP 1 Score: 690.3 bits (1780), Expect = 3.4e-195
Identity = 338/339 (99.71%), Postives = 339/339 (100.00%), Query Frame = 0


Query: 1   MENAAPRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPD 60
           MENAAPRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPD
Sbjct: 1   MENAAPRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPD 60

Query: 61  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120
           SLSIQTHPSLSFDHPYPPTKLMFNP+ALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV
Sbjct: 61  SLSIQTHPSLSFDHPYPPTKLMFNPDALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180

Query: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS
Sbjct: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240

Query: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300

Query: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 339

[Close]

BLAST of Carg15035 vs. NCBI nr
Match: XP_023551826.1 (protein TRANSPARENT TESTA GLABRA 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 690.3 bits (1780), Expect = 3.4e-195
Identity = 338/339 (99.71%), Postives = 338/339 (99.71%), Query Frame = 0


Query: 1   MENAAPRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPD 60
           MENAAPRSEFMATYDSPHPLYAMAISSAHTHSR FPNRIALGSFIEQCTNRVDIVSFDPD
Sbjct: 1   MENAAPRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPD 60

Query: 61  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120
           SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV
Sbjct: 61  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180

Query: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS
Sbjct: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240

Query: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300

Query: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 339

[Close]

BLAST of Carg15035 vs. NCBI nr
Match: XP_022984362.1 (protein TRANSPARENT TESTA GLABRA 1 [Cucurbita maxima])

HSP 1 Score: 686.4 bits (1770), Expect = 4.9e-194
Identity = 336/339 (99.12%), Postives = 337/339 (99.41%), Query Frame = 0


Query: 1   MENAAPRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPD 60
           M NAAPRSEFMATYDSPHPLYAMAISSAHTHSR FPNRIALGSFIEQCTNRVDIVSFDPD
Sbjct: 26  MANAAPRSEFMATYDSPHPLYAMAISSAHTHSRNFPNRIALGSFIEQCTNRVDIVSFDPD 85

Query: 61  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120
           SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV
Sbjct: 86  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 145

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 146 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 205

Query: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPD+PLLRLAWNKQDLRYMATILMDS
Sbjct: 206 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDSPLLRLAWNKQDLRYMATILMDS 265

Query: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 266 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 325

Query: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 326 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 364

[Close]

BLAST of Carg15035 vs. NCBI nr
Match: XP_008455615.1 (PREDICTED: protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo])

HSP 1 Score: 623.2 bits (1606), Expect = 5.1e-175
Identity = 308/339 (90.86%), Postives = 321/339 (94.69%), Query Frame = 0


Query: 1   MENAAPRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPD 60
           MENAA RSEF+ATYDSPHPLYAMAISS H HS  F +RIALGSF+E+  NRVDIVSFDPD
Sbjct: 1   MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120
           S+SI+T+PSLSF+HPYPPTKLMFNP+ LSSL      LASSGD LRLW+VGDSSIEPLS+
Sbjct: 61  SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSL------LASSGDSLRLWKVGDSSIEPLSL 120

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 121 LNNSKTSEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180

Query: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS
Sbjct: 181 WGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240

Query: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NK+VILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 241 NKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300

Query: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           IDPMSMYSAA EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 IDPMSMYSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]

BLAST of Carg15035 vs. NCBI nr
Match: NP_001267687.1 (protein TRANSPARENT TESTA GLABRA 1-like [Cucumis sativus] >ABY64743.1 WD-repeat protein [Cucumis sativus] >KGN53658.1 WD-repeat protein [Cucumis sativus])

HSP 1 Score: 621.7 bits (1602), Expect = 1.5e-174
Identity = 305/339 (89.97%), Postives = 321/339 (94.69%), Query Frame = 0


Query: 1   MENAAPRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPD 60
           ME+AA RSEF+ATY+SPHPLYAMAISS H HS  F +RIALGSF+E+  NRVDIVSFDPD
Sbjct: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120
           S+SI+ +PSLSF+HPYPPTKLMFNP+ LSSL      LASSGD LRLW++GDSSIEPLS+
Sbjct: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSL------LASSGDSLRLWKLGDSSIEPLSL 120

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180

Query: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS
Sbjct: 181 WGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240

Query: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NK+VILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 241 NKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300

Query: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           IDPMSMYSAA EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 IDPMSMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]

BLAST of Carg15035 vs. TAIR10
Match: AT5G24520.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 544.3 bits (1401), Expect = 5.4e-155
Identity = 266/345 (77.10%), Postives = 306/345 (88.70%), Query Frame = 0


Query: 1   MENAAP----RSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVS 60
           M+N+AP    RSE   TYDSP+PLYAMA SS  + S    +RIA+GSF+E   NR+DI+S
Sbjct: 1   MDNSAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSS---GHRIAVGSFLEDYNNRIDILS 60

Query: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGD--SS 120
           FD DS++++  P+LSF+HPYPPTKLMF+P +L    +S D+LASSGD+LRLW++ +  S+
Sbjct: 61  FDSDSMTVKPLPNLSFEHPYPPTKLMFSPPSLRR-PSSGDLLASSGDFLRLWEINEDSST 120

Query: 121 IEPLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDK 180
           +EP+SVLNNSKTSEFCAPLTSFDWN+VEPKR+GT SIDTTCTIWDIEKSVVETQ IAHDK
Sbjct: 121 VEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDK 180

Query: 181 EVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMA 240
           EV+DIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMA
Sbjct: 181 EVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMA 240

Query: 241 TILMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPM 300
           TILMDSNKVVILDIRSP++PVAELERH +SVNAIAWAP+SC+HICS GDD QALIWELP 
Sbjct: 241 TILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPT 300

Query: 301 VAGPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           VAGPNGIDPMS+YSA  EINQLQWS++QPDWI +AF+NKMQLL+V
Sbjct: 301 VAGPNGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]

BLAST of Carg15035 vs. TAIR10
Match: AT1G12910.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 411.8 bits (1057), Expect = 4.2e-115
Identity = 206/337 (61.13%), Postives = 256/337 (75.96%), Query Frame = 0


Query: 7   RSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQT 66
           RSE + TY++P  +YAM  S      R    R+A+ S +EQ  NRV+IV  D  +  I++
Sbjct: 18  RSE-IYTYEAPWHIYAMNWSV----RRDKKYRLAITSLLEQYPNRVEIVQLDESNGEIRS 77

Query: 67  HPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGD--SSIEPLSVLNNS 126
            P+LSF+HPYPPTK +F P+         D+LA+S D+LRLW++ D  S +E  S LN++
Sbjct: 78  DPNLSFEHPYPPTKTIFIPDKEC---QRPDLLATSSDFLRLWRIADDHSRVELKSCLNSN 137

Query: 127 KTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEA 186
           K SEFC PLTSFDWNE EP+RIGTSS DTTCTIWDIE+  V+TQ IAHDKEV+DIAWG  
Sbjct: 138 KNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGV 197

Query: 187 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV 246
            VFASVSADGSVR+FDLRDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+MDS KVV
Sbjct: 198 GVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVV 257

Query: 247 ILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNGID 306
           +LDIR P++PV EL+RH +SVNAIAWAP S  HIC+AGDD QALIW++  +      G+D
Sbjct: 258 VLDIRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQHVEGGLD 317

Query: 307 PMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           P+  Y+A  EI QLQWS++QPDW+A+AFS K+Q+L+V
Sbjct: 318 PILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]

BLAST of Carg15035 vs. TAIR10
Match: AT3G26640.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 406.0 bits (1042), Expect = 2.3e-113
Identity = 203/342 (59.36%), Postives = 255/342 (74.56%), Query Frame = 0


Query: 2   ENAAPRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPDS 61
           E  + RSE + TY++P  +YAM  S      R    R+A+ S IEQ  NRV+IV  D  +
Sbjct: 13  EEQSKRSE-IYTYEAPWQIYAMNWSI----RRDKKYRLAITSLIEQYPNRVEIVQLDESN 72

Query: 62  LSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGD--SSIEPLS 121
             I++ P+L F+HPYPPTK  F P+         D+LA+S D+LRLW++ D  S +E  S
Sbjct: 73  GEIRSDPNLCFEHPYPPTKTSFIPDKEC---QRPDLLATSSDFLRLWRISDDESRVELKS 132

Query: 122 VLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDI 181
            L++ K SEF  P+TSFDWNE EP+RIGTSSIDTTCTIWDIE+ VV+TQ IAHDKEVYDI
Sbjct: 133 CLSSDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDI 192

Query: 182 AWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMD 241
           AWG   VFASVS DGSVR+FDLRDKEHSTIIYES +P TPL+RL+WNKQD RYMAT++M 
Sbjct: 193 AWGGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMG 252

Query: 242 SNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG-- 301
           S K+V+LDIR P++PV EL+RH +SVNAIAWAP S  HICSAGDD QALIW++  +    
Sbjct: 253 SAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHV 312

Query: 302 PNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
             G+DP+  Y+A  E+ QLQWS++QPDW+A+AFSNK+Q+L+V
Sbjct: 313 EGGLDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346

[Close]

BLAST of Carg15035 vs. TAIR10
Match: AT2G19540.1 (Transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 44.3 bits (103), Expect = 1.8e-04
Identity = 33/165 (20.00%), Postives = 52/165 (31.52%), Query Frame = 0


Query: 135 SFDWNEVEPKRIGTSSIDTTCTIWDIEK---SVVETQFIAHDKEVYDIAW--GEARVFAS 194
           + DW+     R+ +    +   +W+      +V    F  H   V D+ W   E  VFAS
Sbjct: 228 AIDWSPATAGRLLSGDCKSMIHLWEPASGSWAVDPIPFAGHTASVEDLQWSPAEENVFAS 287

Query: 195 VSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIR 254
            S DGSV ++D+R  +                                            
Sbjct: 288 CSVDGSVAVWDIRLGKSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 347

Query: 255 SPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPM 295
                VA  E H   + +I W+      +     D Q  IW+L +
Sbjct: 348 GGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSGDNQLTIWDLSL 392

[Close]

BLAST of Carg15035 vs. Swiss-Prot
Match: sp|Q9XGN1|TTG1_ARATH (Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana OX=3702 GN=TTG1 PE=1 SV=1)

HSP 1 Score: 544.3 bits (1401), Expect = 9.8e-154
Identity = 266/345 (77.10%), Postives = 306/345 (88.70%), Query Frame = 0


Query: 1   MENAAP----RSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVS 60
           M+N+AP    RSE   TYDSP+PLYAMA SS  + S    +RIA+GSF+E   NR+DI+S
Sbjct: 1   MDNSAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSS---GHRIAVGSFLEDYNNRIDILS 60

Query: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGD--SS 120
           FD DS++++  P+LSF+HPYPPTKLMF+P +L    +S D+LASSGD+LRLW++ +  S+
Sbjct: 61  FDSDSMTVKPLPNLSFEHPYPPTKLMFSPPSLRR-PSSGDLLASSGDFLRLWEINEDSST 120

Query: 121 IEPLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDK 180
           +EP+SVLNNSKTSEFCAPLTSFDWN+VEPKR+GT SIDTTCTIWDIEKSVVETQ IAHDK
Sbjct: 121 VEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDK 180

Query: 181 EVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMA 240
           EV+DIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMA
Sbjct: 181 EVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMA 240

Query: 241 TILMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPM 300
           TILMDSNKVVILDIRSP++PVAELERH +SVNAIAWAP+SC+HICS GDD QALIWELP 
Sbjct: 241 TILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPT 300

Query: 301 VAGPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           VAGPNGIDPMS+YSA  EINQLQWS++QPDWI +AF+NKMQLL+V
Sbjct: 301 VAGPNGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

[Close]

BLAST of Carg15035 vs. Swiss-Prot
Match: sp|Q9LPV9|LWD1_ARATH (WD repeat-containing protein LWD1 OS=Arabidopsis thaliana OX=3702 GN=LWD1 PE=2 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 7.6e-114
Identity = 206/337 (61.13%), Postives = 256/337 (75.96%), Query Frame = 0


Query: 7   RSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQT 66
           RSE + TY++P  +YAM  S      R    R+A+ S +EQ  NRV+IV  D  +  I++
Sbjct: 18  RSE-IYTYEAPWHIYAMNWSV----RRDKKYRLAITSLLEQYPNRVEIVQLDESNGEIRS 77

Query: 67  HPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGD--SSIEPLSVLNNS 126
            P+LSF+HPYPPTK +F P+         D+LA+S D+LRLW++ D  S +E  S LN++
Sbjct: 78  DPNLSFEHPYPPTKTIFIPDKEC---QRPDLLATSSDFLRLWRIADDHSRVELKSCLNSN 137

Query: 127 KTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEA 186
           K SEFC PLTSFDWNE EP+RIGTSS DTTCTIWDIE+  V+TQ IAHDKEV+DIAWG  
Sbjct: 138 KNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGV 197

Query: 187 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV 246
            VFASVSADGSVR+FDLRDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+MDS KVV
Sbjct: 198 GVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVV 257

Query: 247 ILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG--PNGID 306
           +LDIR P++PV EL+RH +SVNAIAWAP S  HIC+AGDD QALIW++  +      G+D
Sbjct: 258 VLDIRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQHVEGGLD 317

Query: 307 PMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           P+  Y+A  EI QLQWS++QPDW+A+AFS K+Q+L+V
Sbjct: 318 PILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

[Close]

BLAST of Carg15035 vs. Swiss-Prot
Match: sp|Q38960|LWD2_ARATH (WD repeat-containing protein LWD2 OS=Arabidopsis thaliana OX=3702 GN=LWD2 PE=2 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 4.1e-112
Identity = 203/342 (59.36%), Postives = 255/342 (74.56%), Query Frame = 0


Query: 2   ENAAPRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPDS 61
           E  + RSE + TY++P  +YAM  S      R    R+A+ S IEQ  NRV+IV  D  +
Sbjct: 13  EEQSKRSE-IYTYEAPWQIYAMNWSI----RRDKKYRLAITSLIEQYPNRVEIVQLDESN 72

Query: 62  LSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGD--SSIEPLS 121
             I++ P+L F+HPYPPTK  F P+         D+LA+S D+LRLW++ D  S +E  S
Sbjct: 73  GEIRSDPNLCFEHPYPPTKTSFIPDKEC---QRPDLLATSSDFLRLWRISDDESRVELKS 132

Query: 122 VLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDI 181
            L++ K SEF  P+TSFDWNE EP+RIGTSSIDTTCTIWDIE+ VV+TQ IAHDKEVYDI
Sbjct: 133 CLSSDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDI 192

Query: 182 AWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMD 241
           AWG   VFASVS DGSVR+FDLRDKEHSTIIYES +P TPL+RL+WNKQD RYMAT++M 
Sbjct: 193 AWGGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMG 252

Query: 242 SNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAG-- 301
           S K+V+LDIR P++PV EL+RH +SVNAIAWAP S  HICSAGDD QALIW++  +    
Sbjct: 253 SAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHV 312

Query: 302 PNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
             G+DP+  Y+A  E+ QLQWS++QPDW+A+AFSNK+Q+L+V
Sbjct: 313 EGGLDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346

[Close]

BLAST of Carg15035 vs. Swiss-Prot
Match: sp|Q552R1|DCAF7_DICDI (DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum OX=44689 GN=wdr68 PE=3 SV=2)

HSP 1 Score: 349.0 bits (894), Expect = 6.0e-95
Identity = 186/330 (56.36%), Postives = 235/330 (71.21%), Query Frame = 0


Query: 13  TYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQTHPSLSF 72
           TY+SP  +Y ++ SS        P R+A+GSF+E  TNRVD++  + +  + Q      F
Sbjct: 8   TYNSPWVIYGLSWSSRVNR----PFRLAIGSFLEDYTNRVDVIQLNEE--TDQFEVVCGF 67

Query: 73  DHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDS--SIEPLSVLNNSKTSEFC 132
           +HPYPPTK M+ P+  S   N  D+LA++GDYLRLW+VG +  SI+  S+L N   SEFC
Sbjct: 68  EHPYPPTKCMWIPDKNS---NRPDLLATTGDYLRLWEVGSNQRSIKLKSLLTN-VISEFC 127

Query: 133 APLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIAWGEAR-VFAS 192
           APL+SFDWNE +P  + TSSIDTTCTIW+IE    +TQ IAHDKEV+DIA+     +FAS
Sbjct: 128 APLSSFDWNETDPSLLATSSIDTTCTIWNIETGQAKTQLIAHDKEVFDIAFARGTDLFAS 187

Query: 193 VSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIR 252
           V ADGS+R+FDLR+ EHSTIIYE+P    PLLRL WNKQD  Y+ATI  DS KV+ILDIR
Sbjct: 188 VGADGSLRMFDLRNLEHSTIIYETPS-FVPLLRLCWNKQDPNYLATIQQDSPKVIILDIR 247

Query: 253 SPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNGIDPMSMYSA 312
            PSVP AEL  H S+VN I+WAP S  HIC+  DDKQALIW+L  +  P   DP+  Y+A
Sbjct: 248 VPSVPAAELVFHKSAVNGISWAPHSSCHICTVSDDKQALIWDLSSMPKPIE-DPLLTYNA 307

Query: 313 AHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
             EINQL WS++QPDWIA+AFS+ +Q+LKV
Sbjct: 308 LAEINQLSWSSSQPDWIAIAFSSHLQILKV 325

[Close]

BLAST of Carg15035 vs. Swiss-Prot
Match: sp|P61962|DCAF7_HUMAN (DDB1- and CUL4-associated factor 7 OS=Homo sapiens OX=9606 GN=DCAF7 PE=1 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 4.5e-90
Identity = 179/342 (52.34%), Postives = 229/342 (66.96%), Query Frame = 0


Query: 14  YDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPDSLSIQTHPSLSFD 73
           Y++P  +YAM  S      + F  R+ALGSF+E+  N+V +V  D +S         +FD
Sbjct: 13  YEAPWTVYAMNWSV--RPDKRF--RLALGSFVEEYNNKVQLVGLDEESSEFICRN--TFD 72

Query: 74  HPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSVLNNSKTSEFCAPL 133
           HPYP TKLM+ P+         D+LA+SGDYLR+W+VG++      +LNN+K S+FCAPL
Sbjct: 73  HPYPTTKLMWIPDTKGVY---PDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPL 132

Query: 134 TSFDWNEVEPKRIGTSSIDTTCTIWDIE-----------KSVVETQFIAHDKEVYDIAWG 193
           TSFDWNEV+P  +GTSSIDTTCTIW +E              V+TQ IAHDKEVYDIA+ 
Sbjct: 133 TSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFS 192

Query: 194 EA----RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILM 253
            A     +FASV ADGSVR+FDLR  EHSTIIYE PQ   PLLRL WNKQD  Y+AT+ M
Sbjct: 193 RAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQ-HHPLLRLCWNKQDPNYLATMAM 252

Query: 254 DSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGP 313
           D  +VVILD+R P  PVA L  H + VN IAWAP S  HIC+A DD QALIW++  +  P
Sbjct: 253 DGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQM--P 312

Query: 314 NGI-DPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
             I DP+  Y+A  EIN +QW++ QPDWIA+ ++N +++L+V
Sbjct: 313 RAIEDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV 342

[Close]

BLAST of Carg15035 vs. TrEMBL
Match: tr|A0A1S3C1G5|A0A1S3C1G5_CUCME (protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo OX=3656 GN=LOC103495746 PE=4 SV=1)

HSP 1 Score: 623.2 bits (1606), Expect = 3.3e-175
Identity = 308/339 (90.86%), Postives = 321/339 (94.69%), Query Frame = 0


Query: 1   MENAAPRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPD 60
           MENAA RSEF+ATYDSPHPLYAMAISS H HS  F +RIALGSF+E+  NRVDIVSFDPD
Sbjct: 1   MENAASRSEFLATYDSPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120
           S+SI+T+PSLSF+HPYPPTKLMFNP+ LSSL      LASSGD LRLW+VGDSSIEPLS+
Sbjct: 61  SVSIKTNPSLSFEHPYPPTKLMFNPSPLSSL------LASSGDSLRLWKVGDSSIEPLSL 120

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVE KRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 121 LNNSKTSEFCAPLTSFDWNEVELKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180

Query: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS
Sbjct: 181 WGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240

Query: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NK+VILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 241 NKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300

Query: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           IDPMSMYSAA EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 IDPMSMYSAACEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]

BLAST of Carg15035 vs. TrEMBL
Match: tr|B7SBL6|B7SBL6_CUCSA (WD-repeat protein OS=Cucumis sativus OX=3659 GN=TTG1 PE=2 SV=1)

HSP 1 Score: 621.7 bits (1602), Expect = 9.7e-175
Identity = 305/339 (89.97%), Postives = 321/339 (94.69%), Query Frame = 0


Query: 1   MENAAPRSEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVSFDPD 60
           ME+AA RSEF+ATY+SPHPLYAMAISS H HS  F +RIALGSF+E+  NRVDIVSFDPD
Sbjct: 1   MEHAASRSEFLATYESPHPLYAMAISSPHAHSLNFSSRIALGSFVEEYNNRVDIVSFDPD 60

Query: 61  SLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIEPLSV 120
           S+SI+ +PSLSF+HPYPPTKLMFNP+ LSSL      LASSGD LRLW++GDSSIEPLS+
Sbjct: 61  SISIKANPSLSFEHPYPPTKLMFNPSPLSSL------LASSGDSLRLWKLGDSSIEPLSL 120

Query: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180
           LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA
Sbjct: 121 LNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEVYDIA 180

Query: 181 WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240
           WGEARVFASVSADGSVRIFD+RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS
Sbjct: 181 WGEARVFASVSADGSVRIFDMRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 240

Query: 241 NKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300
           NK+VILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG
Sbjct: 241 NKIVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVAGPNG 300

Query: 301 IDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           IDPMSMYSAA EINQLQWSAAQPDWIALAFSNKMQLLKV
Sbjct: 301 IDPMSMYSAAFEINQLQWSAAQPDWIALAFSNKMQLLKV 333

[Close]

BLAST of Carg15035 vs. TrEMBL
Match: tr|M5X1V3|M5X1V3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G319500 PE=4 SV=1)

HSP 1 Score: 576.6 bits (1485), Expect = 3.6e-161
Identity = 281/343 (81.92%), Postives = 312/343 (90.96%), Query Frame = 0


Query: 1   MENAAPRS----EFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVS 60
           MEN+A  S    E   TY+SP+PLYAMA S + T +R   +RIA+GSFIE+ +NRVDI+S
Sbjct: 1   MENSAQESHLGQENSVTYESPYPLYAMAFSPSQTRNRHQHHRIAVGSFIEEYSNRVDILS 60

Query: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIE 120
           FDPD+LS++ +P+LSFDHPYPPTKLMF+PN  +SL  S+D+LASSGDYLRLW+V DSS+E
Sbjct: 61  FDPDTLSVKPNPTLSFDHPYPPTKLMFHPNP-NSLHKSNDVLASSGDYLRLWEVRDSSVE 120

Query: 121 PLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEV 180
           P+ VLNNSKTSEFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEV
Sbjct: 121 PIQVLNNSKTSEFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEV 180

Query: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 240
           YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI
Sbjct: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 240

Query: 241 LMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVA 300
           LMDSNKVVILDIRSP++PVAELERH +SVNAIAWAP+SCRHICSAGDD QALIWELP VA
Sbjct: 241 LMDSNKVVILDIRSPTMPVAELERHRASVNAIAWAPQSCRHICSAGDDTQALIWELPTVA 300

Query: 301 GPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           GPNGIDPMSMYSA  EINQLQWSAAQPDWI++AFSNKMQLLKV
Sbjct: 301 GPNGIDPMSMYSAGAEINQLQWSAAQPDWISIAFSNKMQLLKV 342

[Close]

BLAST of Carg15035 vs. TrEMBL
Match: tr|A0A0A0R9P9|A0A0A0R9P9_PAESU (WD40 protein OS=Paeonia suffruticosa OX=45171 GN=WD40-2 PE=2 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 6.1e-161
Identity = 282/343 (82.22%), Postives = 309/343 (90.09%), Query Frame = 0


Query: 1   MENAAPR----SEFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVS 60
           MEN+       SE + TYDSPHPLYAMA SS+ + +    +RIA+GSFIE+  NRVDIVS
Sbjct: 1   MENSTQESHLGSENLVTYDSPHPLYAMAFSSSPSRTHLHHHRIAVGSFIEEFNNRVDIVS 60

Query: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIE 120
           FD ++L+I+T+P+LSF+HPYPPTKLMF PN+ SSLR SSD+LASSGDYLRLW+V D+SIE
Sbjct: 61  FDDETLTIKTNPNLSFEHPYPPTKLMFQPNSASSLRKSSDLLASSGDYLRLWEVRDNSIE 120

Query: 121 PLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEV 180
           PLSVLNNSKTSEFCAPLTSFDWNEVEP+RIGTSSIDTTCTIWD+E+ VVETQ IAHDKEV
Sbjct: 121 PLSVLNNSKTSEFCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDVERGVVETQLIAHDKEV 180

Query: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 240
           YDIAW EA VFASVSADGSVRIFDLRDKEHSTIIYES QPDTPLLRLAWNKQDLRYMATI
Sbjct: 181 YDIAWCEAGVFASVSADGSVRIFDLRDKEHSTIIYESSQPDTPLLRLAWNKQDLRYMATI 240

Query: 241 LMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVA 300
           LMDSNKVVILDIRSP++PVAELERH SSVNAIAWAP+SCRHICSAGDD QALIWELP VA
Sbjct: 241 LMDSNKVVILDIRSPTMPVAELERHRSSVNAIAWAPQSCRHICSAGDDTQALIWELPTVA 300

Query: 301 GPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           GPNGIDPMSMYSA  EINQLQWSA QPDWIA+AF+NKMQLLKV
Sbjct: 301 GPNGIDPMSMYSAGSEINQLQWSAVQPDWIAIAFANKMQLLKV 343

[Close]

BLAST of Carg15035 vs. TrEMBL
Match: tr|A0A0A7W590|A0A0A7W590_PRUAV (WD40 transcription factor OS=Prunus avium OX=42229 GN=WD40 PE=2 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 8.0e-161
Identity = 282/343 (82.22%), Postives = 311/343 (90.67%), Query Frame = 0


Query: 1   MENAAPRS----EFMATYDSPHPLYAMAISSAHTHSRTFPNRIALGSFIEQCTNRVDIVS 60
           MEN+A  S    E   TY+SP+PLYAMA SS  T +R   +RIA+GSFIE+ TNRVDI+S
Sbjct: 1   MENSAQESHLGQENSVTYESPYPLYAMAFSSPQTRNRHQHHRIAVGSFIEEYTNRVDILS 60

Query: 61  FDPDSLSIQTHPSLSFDHPYPPTKLMFNPNALSSLRNSSDILASSGDYLRLWQVGDSSIE 120
           FDPD+LS++ +P+LSFDHPYPPTKLMF+PN  +SL  S+D+LASSGDYLRLW+V DSS+E
Sbjct: 61  FDPDTLSVKPNPTLSFDHPYPPTKLMFHPNP-NSLHKSNDVLASSGDYLRLWEVRDSSVE 120

Query: 121 PLSVLNNSKTSEFCAPLTSFDWNEVEPKRIGTSSIDTTCTIWDIEKSVVETQFIAHDKEV 180
           P+ VLNNSKTSEFCAPLTSFDWN++EP+RIGTSSIDTTCTIWDIEK VVETQ IAHDKEV
Sbjct: 121 PIQVLNNSKTSEFCAPLTSFDWNDIEPRRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEV 180

Query: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 240
           YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI
Sbjct: 181 YDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 240

Query: 241 LMDSNKVVILDIRSPSVPVAELERHHSSVNAIAWAPRSCRHICSAGDDKQALIWELPMVA 300
           LMDSNKVVILDIRSP++PVAELERH +SVNAIAWAP+S RHICSAGDD QALIWELP VA
Sbjct: 241 LMDSNKVVILDIRSPTMPVAELERHRASVNAIAWAPQSSRHICSAGDDTQALIWELPTVA 300

Query: 301 GPNGIDPMSMYSAAHEINQLQWSAAQPDWIALAFSNKMQLLKV 340
           GPNGIDPMSMYSA  EINQLQWSAAQPDWI++AFSNKMQLLKV
Sbjct: 301 GPNGIDPMSMYSAGAEINQLQWSAAQPDWISIAFSNKMQLLKV 342

The following BLAST results are available for this feature:

BLAST of Carg15035 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922603.1	3.4e-195	99.71	protein TRANSPARENT TESTA GLABRA 1 [Cucurbita moschata]	[more]
XP_023551826.1	3.4e-195	99.71	protein TRANSPARENT TESTA GLABRA 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022984362.1	4.9e-194	99.12	protein TRANSPARENT TESTA GLABRA 1 [Cucurbita maxima]	[more]
XP_008455615.1	5.1e-175	90.86	PREDICTED: protein TRANSPARENT TESTA GLABRA 1 [Cucumis melo]	[more]
NP_001267687.1	1.5e-174	89.97	protein TRANSPARENT TESTA GLABRA 1-like [Cucumis sativus] >ABY64743.1 WD-repeat ...	[more]

BLAST of Carg15035 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G24520.1	5.4e-155	77.10	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G12910.1	4.2e-115	61.13	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G26640.1	2.3e-113	59.36	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G19540.1	1.8e-04	20.00	Transducin family protein / WD-40 repeat family protein	[more]

BLAST of Carg15035 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9XGN1\|TTG1_ARATH	9.8e-154	77.10	Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana OX=3702 GN=TTG1 PE=1 ...	[more]
sp\|Q9LPV9\|LWD1_ARATH	7.6e-114	61.13	WD repeat-containing protein LWD1 OS=Arabidopsis thaliana OX=3702 GN=LWD1 PE=2 S...	[more]
sp\|Q38960\|LWD2_ARATH	4.1e-112	59.36	WD repeat-containing protein LWD2 OS=Arabidopsis thaliana OX=3702 GN=LWD2 PE=2 S...	[more]
sp\|Q552R1\|DCAF7_DICDI	6.0e-95	56.36	DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum OX=44689 ...	[more]
sp\|P61962\|DCAF7_HUMAN	4.5e-90	52.34	DDB1- and CUL4-associated factor 7 OS=Homo sapiens OX=9606 GN=DCAF7 PE=1 SV=1	[more]

BLAST of Carg15035 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C1G5\|A0A1S3C1G5_CUCME	3.3e-175	90.86	protein TRANSPARENT TESTA GLABRA 1 OS=Cucumis melo OX=3656 GN=LOC103495746 PE=4 ...	[more]
tr\|B7SBL6\|B7SBL6_CUCSA	9.7e-175	89.97	WD-repeat protein OS=Cucumis sativus OX=3659 GN=TTG1 PE=2 SV=1	[more]
tr\|M5X1V3\|M5X1V3_PRUPE	3.6e-161	81.92	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G319500 PE=4 SV=1	[more]
tr\|A0A0A0R9P9\|A0A0A0R9P9_PAESU	6.1e-161	82.22	WD40 protein OS=Paeonia suffruticosa OX=45171 GN=WD40-2 PE=2 SV=1	[more]
tr\|A0A0A7W590\|A0A0A7W590_PRUAV	8.0e-161	82.22	WD40 transcription factor OS=Prunus avium OX=42229 GN=WD40 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036322	WD40_repeat_dom_sf
IPR017986	WD40_repeat_dom
IPR019775	WD40_repeat_CS
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR001680	WD40_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15035-RA	Carg15035-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 114..159 e-value: 0.79 score: 17.7 coord: 251..291 e-value: 1.2E-5 score: 34.8 coord: 162..200 e-value: 1.4E-4 score: 31.3 coord: 65..109 e-value: 20.0 score: 8.7
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 255..290 e-value: 0.024 score: 15.4 coord: 169..200 e-value: 0.09 score: 13.6
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 258..292 score: 9.74
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 169..209 score: 9.439
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	G3DSA:2.130.10.10		coord: 58..339 e-value: 2.9E-38 score: 133.9
None	No IPR available	PANTHER	PTHR19919	WD REPEAT CONTAINING PROTEIN	coord: 3..339
None	No IPR available	PANTHER	PTHR19919:SF2	PROTEIN TRANSPARENT TESTA GLABRA 1	coord: 3..339
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 146..160
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 278..292
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 126..300 score: 13.079
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	SSF50978	WD40 repeat-like	coord: 37..293

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15035	CmaCh16G000160	Cucurbita maxima (Rimu)	carcmaB1366
Carg15035	CmoCh16G000190	Cucurbita moschata (Rifu)	carcmoB1326
Carg15035	Cp4.1LG14g07030	Cucurbita pepo (Zucchini)	carcpeB1376

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg15035	Silver-seed gourd	carcarB503
Carg15035	Cucumber (Gy14) v1	carcgyB1108
Carg15035	Cucurbita maxima (Rimu)	carcmaB1368
Carg15035	Cucurbita moschata (Rifu)	carcmoB1328
Carg15035	Cucurbita pepo (Zucchini)	carcpeB1373
Carg15035	Wild cucumber (PI 183967)	carcpiB1028
Carg15035	Cucumber (Chinese Long) v3	carcucB1034
Carg15035	Bottle gourd (USVL1VR-Ls)	carlsiB905