CmoCh15G015010 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh15G015010
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionTransmembrane protein, putative
LocationCmo_Chr15 : 10183659 .. 10184084 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGATATGAACACCCTAGCCGCCGACTGCATTGTCATATGCTGTTGCTGCCAATGCCTGGCGTTGCATATCCTTCTCCTTCTGTTGCTCAAGCTTCCCTGTAAACTCGTTCGAAAAACGAGAGACTTCGCCAAAAGAAGGCTAAGAATGAGAGAAAAAGAGGAAAAGATGGTAATGGAAGATGAGGTTAGAGGCATTAGTAATGGAAGCTGTATGAGAAGTGAAGAAGATGGGTTGGGTTTGAGTTGTTGTATGGAAGAGATTGAGAGGGTGATGCAGGATTTGCATGAGAAGGGAGAGTTTGGTTTTGGAAGCTTTTGGGGAAGGAAGGGTAACTCAGTTTCAGGTTCCTGCAGAGATGAAGAGCCATTTGACCCCACGGATGTACAGTATCAATTAATTCAAGTAATACCTTCTACATGA

mRNA sequence

ATGGAAGATATGAACACCCTAGCCGCCGACTGCATTGTCATATGCTGTTGCTGCCAATGCCTGGCGTTGCATATCCTTCTCCTTCTGTTGCTCAAGCTTCCCTGTAAACTCGTTCGAAAAACGAGAGACTTCGCCAAAAGAAGGCTAAGAATGAGAGAAAAAGAGGAAAAGATGGTAATGGAAGATGAGGTTAGAGGCATTAGTAATGGAAGCTGTATGAGAAGTGAAGAAGATGGGTTGGGTTTGAGTTGTTGTATGGAAGAGATTGAGAGGGTGATGCAGGATTTGCATGAGAAGGGAGAGTTTGGTTTTGGAAGCTTTTGGGGAAGGAAGGGTAACTCAGTTTCAGGTTCCTGCAGAGATGAAGAGCCATTTGACCCCACGGATGTACAGTATCAATTAATTCAAGTAATACCTTCTACATGA

Coding sequence (CDS)

ATGGAAGATATGAACACCCTAGCCGCCGACTGCATTGTCATATGCTGTTGCTGCCAATGCCTGGCGTTGCATATCCTTCTCCTTCTGTTGCTCAAGCTTCCCTGTAAACTCGTTCGAAAAACGAGAGACTTCGCCAAAAGAAGGCTAAGAATGAGAGAAAAAGAGGAAAAGATGGTAATGGAAGATGAGGTTAGAGGCATTAGTAATGGAAGCTGTATGAGAAGTGAAGAAGATGGGTTGGGTTTGAGTTGTTGTATGGAAGAGATTGAGAGGGTGATGCAGGATTTGCATGAGAAGGGAGAGTTTGGTTTTGGAAGCTTTTGGGGAAGGAAGGGTAACTCAGTTTCAGGTTCCTGCAGAGATGAAGAGCCATTTGACCCCACGGATGTACAGTATCAATTAATTCAAGTAATACCTTCTACATGA
Homology
[Close]
BLAST of CmoCh15G015010 vs. TrEMBL
Match: A0A0A0LKX5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G116260 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.3e-55
Identity = 118/146 (80.82%), Postives = 129/146 (88.36%), Query Frame = 1 

Query: 1   MEDMNTLAADCIVICCCCQCLALHILLLLLLKLPCKLVRKTRDFAKRRLRMREKEEKMVM 60
           MED NTLAADCIVICCCCQCLAL I+LLL LKLP KLVRKTR+FAK+RLR+REKEEKMV 
Sbjct: 1   MEDANTLAADCIVICCCCQCLALQIILLLFLKLPWKLVRKTREFAKKRLRLREKEEKMVG 60

Query: 61  ED-----EVRGISNGSCMRSEEDGLGLSCCMEEIERVMQDLHEKGEFGFGSFWGRKGNSV 120
           ++     EVRGISNGSCMR+EE GLGLSCCMEEIE+VMQDLHEKGEFGFGSFWG  GN+ 
Sbjct: 61  KEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFWG-NGNTS 120

Query: 121 SGSCRDEEPFDPTDVQYQLIQVIPST 142
           SGSCRD + F PT+VQYQLIQVIPST
Sbjct: 121 SGSCRD-DLFSPTNVQYQLIQVIPST 144

[Close]
BLAST of CmoCh15G015010 vs. TrEMBL
Match: M5XZU9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012803mg PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.9e-26
Identity = 68/152 (44.74%), Postives = 100/152 (65.79%), Query Frame = 1 

Query: 1   MEDMNTLAADCIVICCCCQCLALHILLLLLLKLPCKLVRKTRDFAKRRLRMREKEEKMV- 60
           MED   +AADC+VI CCCQCL L I + +L KLPCKL++KTRD+  ++L+ R+++E +V 
Sbjct: 1   MEDCGMVAADCVVISCCCQCLILQITIFILFKLPCKLIKKTRDYTMKKLQQRKRKEIVVE 60

Query: 61  ---------MEDEVRGISNGSCMRSEEDGLGLSCCMEEIERVMQDLHEKGEFGFGSFWGR 120
                     +D+   I  G  +RS E G    CCMEE+++V+Q+L ++GEFGFGSFWGR
Sbjct: 61  SQGEIVLDPFKDDFVSIL-GESIRSIEAGHSCRCCMEEVDKVLQELSQRGEFGFGSFWGR 120

Query: 121 K--GNSVSGSCRDEEPFDPTDVQYQLIQVIPS 141
           +  G S      +++ FD   VQ+QLI+++ S
Sbjct: 121 REMGCSPIHHSAEDDQFDSRFVQFQLIEMVGS 151

[Close]
BLAST of CmoCh15G015010 vs. TrEMBL
Match: A0A059D7L7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03072 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.9e-25
Identity = 72/152 (47.37%), Postives = 95/152 (62.50%), Query Frame = 1 

Query: 1   MEDMNTLAADCIVICCCCQCLALHILLLLLLKLPCKLVRKTRDFAKRRL----RMREKEE 60
           MED N LAADCIV+ CCCQCL L I + +LLK+PC+L +KT+ FAK+R     R R+  E
Sbjct: 1   MEDWNALAADCIVVSCCCQCLILQIAVFILLKIPCRLFQKTKRFAKKRFRHSRRRRKSLE 60

Query: 61  KMVMEDEVRGISNGSC-MRSEEDGLGLSC------CMEEIERVMQDLHEKGEFGFGSFWG 120
           K     E + +    C MR  EDG  L        CMEE+E+ +Q++ +KG FGFGSFWG
Sbjct: 61  KTSYLSEGQLVEGPGCSMRDGEDGFFLDVSERGGRCMEEVEKALQEMSQKGVFGFGSFWG 120

Query: 121 RK-GNSVSGSCRDEEPFDPTDVQYQLIQVIPS 141
           R+ G S SG   D + FD + VQ  LI+++ S
Sbjct: 121 RESGGSFSGCVCDHQGFDSSVVQLHLIEIVGS 152

[Close]
BLAST of CmoCh15G015010 vs. TrEMBL
Match: A0A151SDC0_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_025308 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 5.5e-25
Identity = 75/149 (50.34%), Postives = 98/149 (65.77%), Query Frame = 1 

Query: 1   MEDMNTLAADCIVICCCCQCLALHILLLLLLKLPCKLVRKTRDFAKRRLRMREKEEKMVM 60
           MED N L ADC+VI CCCQCL L IL+ +LLKLPCKLV+KTRD+AK++LR R+      M
Sbjct: 1   MEDWNMLGADCVVISCCCQCLMLQILVFVLLKLPCKLVKKTRDYAKKKLRQRKGNTHREM 60

Query: 61  ---EDEVRGISNGSCMRSEE----DGLGLSCCMEEIERVMQDLHEKGEFGFGSFWGRKGN 120
              ED +  I   S     E    DG G S CM+E+E+VM++ +EKGEF FGSFWGRKG 
Sbjct: 61  GSCEDVLVRIREQSLGIQAEVALTDGAGHS-CMDEVEKVMEEFYEKGEFAFGSFWGRKG- 120

Query: 121 SVSGSCRDEEPFDPTD-VQYQLIQVIPST 142
              G   + + +D  + VQYQ+I ++ S+
Sbjct: 121 -PWGVPTNVDHYDHVNFVQYQIIDLVGSS 146

[Close]
BLAST of CmoCh15G015010 vs. TrEMBL
Match: A0A0L9TNH6_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g155300 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 4.6e-24
Identity = 73/156 (46.79%), Postives = 99/156 (63.46%), Query Frame = 1 

Query: 1   MEDMNTLAADCIVICCCCQCLALHILLLLLLKLPCKLVRKTRDFAKRRLRMRE------K 60
           ME+ N LAADC+VI CCCQCL L IL+ L+LKLP KL+RKTR++AK++LR R+      K
Sbjct: 1   MEEWNMLAADCVVISCCCQCLLLQILVFLMLKLPWKLIRKTREYAKKKLRQRKGNDDKKK 60

Query: 61  EEKMVMEDEVRGISNGSCMRSEE----DGLGLSC--CMEEIERVMQDLHEKGEFGFGSFW 120
            E    ED +  I   S     E    DG G  C  CM+E+E++M++L++KGEFGFGSFW
Sbjct: 61  IESACYEDVLVRIHEQSFRIQGEMTVRDGEGFGCGGCMDEVEKIMEELYQKGEFGFGSFW 120

Query: 121 GRK---GNSVSGSCRDEEPFDPTDVQYQLIQVIPST 142
           GR+   G +V     +    DP  V+YQ+I ++  T
Sbjct: 121 GREEPCGFAVPTKIHN----DPNLVRYQVIDLLIKT 152

[Close]
BLAST of CmoCh15G015010 vs. TAIR10
Match: AT3G25597.1 (AT3G25597.1 unknown protein)

HSP 1 Score: 79.7 bits (195), Expect = 1.6e-15
Identity = 58/148 (39.19%), Postives = 81/148 (54.73%), Query Frame = 1 

Query: 1   MEDMNTLAADCIVICCCCQCLALHILLLLLLKLPCKLVRKTRDF-----AKRRLRMR--- 60
           MED+N  AADC+V+ CCC CL L I + + L LP KLV+ TR         RR++     
Sbjct: 1   MEDLNAFAADCVVVSCCCNCLVLQIAIFIFLGLPQKLVKNTRKCYTKWGINRRIKRMGLC 60

Query: 61  -EKEEKMVMEDEVRGISNGSCMRSEEDGLGLSCCMEEIERVMQDLHEKGEFGFGSFWG-- 120
            E  E   ++ E R       M  E +G G   C+EE+E+V+++  + GEF FGSFWG  
Sbjct: 61  FECRENTEVDSEWR--KESMMMSMEMEGFG---CIEEVEQVLEEFSKNGEFLFGSFWGQE 120

Query: 121 RKGNSVSGSCRDEEPFDPTDV-QYQLIQ 137
           R  NS S S    + FD   V +Y++I+
Sbjct: 121 RVQNSSSMSNCGNDNFDLRFVSRYEIIE 143

[Close]
BLAST of CmoCh15G015010 vs. TAIR10
Match: AT1G26140.1 (AT1G26140.1 unknown protein)

HSP 1 Score: 70.5 bits (171), Expect = 9.5e-13
Identity = 44/113 (38.94%), Postives = 63/113 (55.75%), Query Frame = 1 

Query: 2   EDMNTLAADCIVICCCCQCLALHILLLLLLKLPCKLVRKTRDFAKRRLRMREKEEKMVME 61
           ED    AADC+V+ CCCQCL L + + +  K+P KL +K + F K   R+  K  +  ME
Sbjct: 47  EDCGAFAADCVVLSCCCQCLVLQVSVFIFFKIPRKLAKKMKKFVK---RICGKTLQPTME 106

Query: 62  DEVRGISNGSCMRSEEDGLGLSCCMEEIERVMQDLHEKGEFGFGSFWGRKGNS 115
           D      +G+    EE G   S C E+I+R++Q+L     F FGSFW  + +S
Sbjct: 107 DVKEEHWSGNGFPFEE-GSSRSICFEDIDRMLQELSMNKGFLFGSFWRHEDSS 155

[Close]
BLAST of CmoCh15G015010 vs. NCBI nr
Match: gi|659114694|ref|XP_008457185.1| (PREDICTED: uncharacterized protein LOC103496924 [Cucumis melo])

HSP 1 Score: 227.3 bits (578), Expect = 1.7e-56
Identity = 120/147 (81.63%), Postives = 130/147 (88.44%), Query Frame = 1 

Query: 1   MEDMNTLAADCIVICCCCQCLALHILLLLLLKLPCKLVRKTRDFAKRRLRMREKEEKMVM 60
           MED NTLAADCIVICCCCQCLAL I+LLLLLKLPCKLVRKTR+FAK+RL MREKEEKMV 
Sbjct: 1   MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPCKLVRKTREFAKKRLGMREKEEKMVG 60

Query: 61  ED------EVRGISNGSCMRSEEDGLGLSCCMEEIERVMQDLHEKGEFGFGSFWGRKGNS 120
           ++      E+RGISNGSCMR+EE GLGLSCCMEEIE+VMQDLHEKGEFGFGSFWG  GN+
Sbjct: 61  KEKGCCGNELRGISNGSCMRNEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFWG-NGNT 120

Query: 121 VSGSCRDEEPFDPTDVQYQLIQVIPST 142
            SGSCRD E F PT+VQYQLIQVIPST
Sbjct: 121 RSGSCRD-ELFSPTNVQYQLIQVIPST 145

[Close]
BLAST of CmoCh15G015010 vs. NCBI nr
Match: gi|778668222|ref|XP_011649060.1| (PREDICTED: uncharacterized protein LOC105434576 [Cucumis sativus])

HSP 1 Score: 223.8 bits (569), Expect = 1.9e-55
Identity = 118/146 (80.82%), Postives = 129/146 (88.36%), Query Frame = 1 

Query: 1   MEDMNTLAADCIVICCCCQCLALHILLLLLLKLPCKLVRKTRDFAKRRLRMREKEEKMVM 60
           MED NTLAADCIVICCCCQCLAL I+LLL LKLP KLVRKTR+FAK+RLR+REKEEKMV 
Sbjct: 1   MEDANTLAADCIVICCCCQCLALQIILLLFLKLPWKLVRKTREFAKKRLRLREKEEKMVG 60

Query: 61  ED-----EVRGISNGSCMRSEEDGLGLSCCMEEIERVMQDLHEKGEFGFGSFWGRKGNSV 120
           ++     EVRGISNGSCMR+EE GLGLSCCMEEIE+VMQDLHEKGEFGFGSFWG  GN+ 
Sbjct: 61  KEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFWG-NGNTS 120

Query: 121 SGSCRDEEPFDPTDVQYQLIQVIPST 142
           SGSCRD + F PT+VQYQLIQVIPST
Sbjct: 121 SGSCRD-DLFSPTNVQYQLIQVIPST 144

[Close]
BLAST of CmoCh15G015010 vs. NCBI nr
Match: gi|694331687|ref|XP_009356509.1| (PREDICTED: uncharacterized protein LOC103947329 [Pyrus x bretschneideri])

HSP 1 Score: 128.3 bits (321), Expect = 1.1e-26
Identity = 69/146 (47.26%), Postives = 97/146 (66.44%), Query Frame = 1 

Query: 1   MEDMNTLAADCIVICCCCQCLALHILLLLLLKLPCKLVRKTRDFAKRRLRMREKEEKMVM 60
           MED N +AADC+VI CCCQCL L I + +L KLPCKL+RKTR++  ++L+ R ++E +V+
Sbjct: 1   MEDCNMIAADCVVISCCCQCLILQITIFILYKLPCKLIRKTREYTMKKLQQRRRKEIIVL 60

Query: 61  ED----EVRGISNGSCMRSEEDGLGLSC--CMEEIERVMQDLHEKGEFGFGSFWGR--KG 120
           +     +   +   S   S E G G SC  CMEE+E V+Q+  ++GEFGFGSFWGR   G
Sbjct: 61  DTCKDVDFASVVGESMRSSMEAGGGHSCRRCMEEVEEVLQEFSQRGEFGFGSFWGRGELG 120

Query: 121 NSVSGSCRDEEPFDPTDVQYQLIQVI 139
            S S    + +PFD + VQY LI+++
Sbjct: 121 CSPSHHSPNHDPFDTSFVQYHLIEMV 146

[Close]
BLAST of CmoCh15G015010 vs. NCBI nr
Match: gi|596198527|ref|XP_007223661.1| (hypothetical protein PRUPE_ppa012803mg [Prunus persica])

HSP 1 Score: 126.3 bits (316), Expect = 4.1e-26
Identity = 68/152 (44.74%), Postives = 100/152 (65.79%), Query Frame = 1 

Query: 1   MEDMNTLAADCIVICCCCQCLALHILLLLLLKLPCKLVRKTRDFAKRRLRMREKEEKMV- 60
           MED   +AADC+VI CCCQCL L I + +L KLPCKL++KTRD+  ++L+ R+++E +V 
Sbjct: 1   MEDCGMVAADCVVISCCCQCLILQITIFILFKLPCKLIKKTRDYTMKKLQQRKRKEIVVE 60

Query: 61  ---------MEDEVRGISNGSCMRSEEDGLGLSCCMEEIERVMQDLHEKGEFGFGSFWGR 120
                     +D+   I  G  +RS E G    CCMEE+++V+Q+L ++GEFGFGSFWGR
Sbjct: 61  SQGEIVLDPFKDDFVSIL-GESIRSIEAGHSCRCCMEEVDKVLQELSQRGEFGFGSFWGR 120

Query: 121 K--GNSVSGSCRDEEPFDPTDVQYQLIQVIPS 141
           +  G S      +++ FD   VQ+QLI+++ S
Sbjct: 121 REMGCSPIHHSAEDDQFDSRFVQFQLIEMVGS 151

[Close]
BLAST of CmoCh15G015010 vs. NCBI nr
Match: gi|645276117|ref|XP_008243135.1| (PREDICTED: uncharacterized protein LOC103341399 [Prunus mume])

HSP 1 Score: 124.4 bits (311), Expect = 1.6e-25
Identity = 67/152 (44.08%), Postives = 99/152 (65.13%), Query Frame = 1 

Query: 1   MEDMNTLAADCIVICCCCQCLALHILLLLLLKLPCKLVRKTRDFAKRRLRMREKEEKMV- 60
           MED   +AADC+VI CCCQCL L I + +L KLPCKL++KTRD+  ++L+ R+++E +V 
Sbjct: 1   MEDCGMVAADCVVISCCCQCLILQITIFILFKLPCKLIKKTRDYTMKKLQQRKRKEIVVE 60

Query: 61  ---------MEDEVRGISNGSCMRSEEDGLGLSCCMEEIERVMQDLHEKGEFGFGSFWGR 120
                     +D+   I  G  +R  E G    CCMEE+++V+Q+L ++GEFGFGSFWGR
Sbjct: 61  SQGEIVLDPFKDDFVSIL-GESIRPIEAGHSCRCCMEEVDKVLQELSQRGEFGFGSFWGR 120

Query: 121 K--GNSVSGSCRDEEPFDPTDVQYQLIQVIPS 141
           +  G S      +++ FD   VQ+QLI+++ S
Sbjct: 121 REMGCSPIHHSAEDDQFDSRFVQFQLIEMVGS 151

The following BLAST results are available for this feature:
BLAST of CmoCh15G015010 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh15G015010 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKX5_CUCSA1.3e-5580.82Uncharacterized protein OS=Cucumis sativus GN=Csa_2G116260 PE=4 SV=1[more]
M5XZU9_PRUPE2.9e-2644.74Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012803mg PE=4 SV=1[more]
A0A059D7L7_EUCGR1.9e-2547.37Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03072 PE=4 SV=1[more]
A0A151SDC0_CAJCA5.5e-2550.34Uncharacterized protein OS=Cajanus cajan GN=KK1_025308 PE=4 SV=1[more]
A0A0L9TNH6_PHAAN4.6e-2446.79Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g155300 PE=4 SV=1[more]
BLAST of CmoCh15G015010 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G25597.11.6e-1539.19 unknown protein[more]
AT1G26140.19.5e-1338.94 unknown protein[more]
BLAST of CmoCh15G015010 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659114694|ref|XP_008457185.1|1.7e-5681.63PREDICTED: uncharacterized protein LOC103496924 [Cucumis melo][more]
gi|778668222|ref|XP_011649060.1|1.9e-5580.82PREDICTED: uncharacterized protein LOC105434576 [Cucumis sativus][more]
gi|694331687|ref|XP_009356509.1|1.1e-2647.26PREDICTED: uncharacterized protein LOC103947329 [Pyrus x bretschneideri][more]
gi|596198527|ref|XP_007223661.1|4.1e-2644.74hypothetical protein PRUPE_ppa012803mg [Prunus persica][more]
gi|645276117|ref|XP_008243135.1|1.6e-2544.08PREDICTED: uncharacterized protein LOC103341399 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G015010.1CmoCh15G015010.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33264FAMILY NOT NAMEDcoord: 1..134
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh15G015010CmaCh15G014230Cucurbita maxima (Rimu)cmacmoB287
CmoCh15G015010CmaCh04G009680Cucurbita maxima (Rimu)cmacmoB699
CmoCh15G015010Cp4.1LG13g00210Cucurbita pepo (Zucchini)cmocpeB269
CmoCh15G015010Carg00084Silver-seed gourdcarcmoB0919
CmoCh15G015010Carg20757Silver-seed gourdcarcmoB1004
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh15G015010Melon (DHL92) v3.6.1cmomedB303
CmoCh15G015010Wax gourdcmowgoB0372