Cp4.1LG13g00210 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGATATGAACACCCTTGCCGCCGACTGCATTGTCATATGCTGTTGCTGCCAATGCCTGGCGTTGCATATCCTTCTCCTTCTGTTACTCAAGCTTCCCTGTAAACTCGTTCGAAAAACGAGAGACTTCGCCAAAAGAAGGCTAAGAATGAGAGAAAAAGAGGAAAAGATGGTAATGGAAGATGAGGTTAGAGGCATTAGTAATGGAAGTTGTATGAGAAGTGAAGAAGATGGGTTGGGTTTGAGTTGTTGTATGGAAGAGATTGAGAGGGTGATGCAGGATTTGCATGAGAAGGGAGAGTTTGGTTTTGGAAGCTTTTGGGGAAGAAAGGGTAACTCAGTTTCAGGTTCCTGCAGAGATGAAGAGCCATTTAATCCTACACATGTACAGTATCAATTAATTCAAGTACCTTCTACATGA ATGGAAGATATGAACACCCTTGCCGCCGACTGCATTGTCATATGCTGTTGCTGCCAATGCCTGGCGTTGCATATCCTTCTCCTTCTGTTACTCAAGCTTCCCTGTAAACTCGTTCGAAAAACGAGAGACTTCGCCAAAAGAAGGCTAAGAATGAGAGAAAAAGAGGAAAAGATGGTAATGGAAGATGAGGTTAGAGGCATTAGTAATGGAAGTTGTATGAGAAGTGAAGAAGATGGGTTGGGTTTGAGTTGTTGTATGGAAGAGATTGAGAGGGTGATGCAGGATTTGCATGAGAAGGGAGAGTTTGGTTTTGGAAGCTTTTGGGGAAGAAAGGGTAACTCAGTTTCAGGTTCCTGCAGAGATGAAGAGCCATTTAATCCTACACATGTACAGTATCAATTAATTCAAGTACCTTCTACATGA ATGGAAGATATGAACACCCTTGCCGCCGACTGCATTGTCATATGCTGTTGCTGCCAATGCCTGGCGTTGCATATCCTTCTCCTTCTGTTACTCAAGCTTCCCTGTAAACTCGTTCGAAAAACGAGAGACTTCGCCAAAAGAAGGCTAAGAATGAGAGAAAAAGAGGAAAAGATGGTAATGGAAGATGAGGTTAGAGGCATTAGTAATGGAAGTTGTATGAGAAGTGAAGAAGATGGGTTGGGTTTGAGTTGTTGTATGGAAGAGATTGAGAGGGTGATGCAGGATTTGCATGAGAAGGGAGAGTTTGGTTTTGGAAGCTTTTGGGGAAGAAAGGGTAACTCAGTTTCAGGTTCCTGCAGAGATGAAGAGCCATTTAATCCTACACATGTACAGTATCAATTAATTCAAGTACCTTCTACATGA MEDMNTLAADCIVICCCCQCLALHILLLLLLKLPCKLVRKTRDFAKRRLRMREKEEKMVMEDEVRGISNGSCMRSEEDGLGLSCCMEEIERVMQDLHEKGEFGFGSFWGRKGNSVSGSCRDEEPFNPTHVQYQLIQVPST
BLAST of Cp4.1LG13g00210 vs. TrEMBL
Match: A0A0A0LKX5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G116260 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 7.2e-54 Identity = 117/146 (80.14%), Postives = 129/146 (88.36%), Query Frame = 1
BLAST of Cp4.1LG13g00210 vs. TrEMBL
Match: M5XZU9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012803mg PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 2.4e-25 Identity = 66/149 (44.30%), Postives = 98/149 (65.77%), Query Frame = 1
BLAST of Cp4.1LG13g00210 vs. TrEMBL
Match: A0A059D7L7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03072 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 2.7e-24 Identity = 70/149 (46.98%), Postives = 93/149 (62.42%), Query Frame = 1
BLAST of Cp4.1LG13g00210 vs. TrEMBL
Match: A0A151SDC0_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_025308 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 7.8e-24 Identity = 74/145 (51.03%), Postives = 93/145 (64.14%), Query Frame = 1
BLAST of Cp4.1LG13g00210 vs. TrEMBL
Match: V7CHJ1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G281600g PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.0e-23 Identity = 72/153 (47.06%), Postives = 95/153 (62.09%), Query Frame = 1
BLAST of Cp4.1LG13g00210 vs. TAIR10
Match: AT3G25597.1 (AT3G25597.1 unknown protein) HSP 1 Score: 78.6 bits (192), Expect = 3.5e-15 Identity = 57/148 (38.51%), Postives = 81/148 (54.73%), Query Frame = 1
BLAST of Cp4.1LG13g00210 vs. TAIR10
Match: AT1G26140.1 (AT1G26140.1 unknown protein) HSP 1 Score: 70.5 bits (171), Expect = 9.5e-13 Identity = 44/113 (38.94%), Postives = 63/113 (55.75%), Query Frame = 1
BLAST of Cp4.1LG13g00210 vs. NCBI nr
Match: gi|659114694|ref|XP_008457185.1| (PREDICTED: uncharacterized protein LOC103496924 [Cucumis melo]) HSP 1 Score: 221.5 bits (563), Expect = 9.4e-55 Identity = 119/147 (80.95%), Postives = 130/147 (88.44%), Query Frame = 1
BLAST of Cp4.1LG13g00210 vs. NCBI nr
Match: gi|778668222|ref|XP_011649060.1| (PREDICTED: uncharacterized protein LOC105434576 [Cucumis sativus]) HSP 1 Score: 218.0 bits (554), Expect = 1.0e-53 Identity = 117/146 (80.14%), Postives = 129/146 (88.36%), Query Frame = 1
BLAST of Cp4.1LG13g00210 vs. NCBI nr
Match: gi|694331687|ref|XP_009356509.1| (PREDICTED: uncharacterized protein LOC103947329 [Pyrus x bretschneideri]) HSP 1 Score: 125.9 bits (315), Expect = 5.4e-26 Identity = 68/145 (46.90%), Postives = 96/145 (66.21%), Query Frame = 1
BLAST of Cp4.1LG13g00210 vs. NCBI nr
Match: gi|596198527|ref|XP_007223661.1| (hypothetical protein PRUPE_ppa012803mg [Prunus persica]) HSP 1 Score: 123.2 bits (308), Expect = 3.5e-25 Identity = 66/149 (44.30%), Postives = 98/149 (65.77%), Query Frame = 1
BLAST of Cp4.1LG13g00210 vs. NCBI nr
Match: gi|645276117|ref|XP_008243135.1| (PREDICTED: uncharacterized protein LOC103341399 [Prunus mume]) HSP 1 Score: 121.3 bits (303), Expect = 1.3e-24 Identity = 65/149 (43.62%), Postives = 97/149 (65.10%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|