CmoCh15G014060 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh15G014060
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRing finger protein, putative
LocationCmo_Chr15 : 9576912 .. 9577469 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGCCGACTCCTTTAGACGCCGACGACACCGTCAGCTTCCAGCCACCACCACCACCGCCACCGTGCCACGACCTCCGCGCTTGTACTTGGAGGCCGTACTCCAATTCCAGAGACTTCGAAGCCAACGCTGCTGTCGTAGTCATCATCCTTCTCTGCGGTCTCATCTGCTCTCTAGCTCTCAACACCGCCATTCGCTGCTTTCTCCGCCGCCGCGGAGACGCCGATGAAAACCCAAGTGATACCCGGCAGGAGGAGCTTCGTGATGAGACGAAGCCGACGTTAGTGGACAAATTGAAGATGGCTCCGGCGTTGGTGTTCTCGGCGGAGATCAAGCCGAAACTCGCCGGTGCGGAGGCGGAGTGTACGATTTGTTTGACGGAATTCTCGGAAGGGGAAGAGATTCGTGTATTGGCGATTTGTAAGCACGGATTTCATGTTCAATGTATTCAAACATGGCTGATTTTGCATTCTTCTTGTCCGACTTGCCGCTGTAGCTACCTCCCTCCGTCACCGTCGTCCGCCGCACACGGCGGCGACGGCGACGGCGACCCCTGA

mRNA sequence

ATGCGGCCGACTCCTTTAGACGCCGACGACACCGTCAGCTTCCAGCCACCACCACCACCGCCACCGTGCCACGACCTCCGCGCTTGTACTTGGAGGCCGTACTCCAATTCCAGAGACTTCGAAGCCAACGCTGCTGTCGTAGTCATCATCCTTCTCTGCGGTCTCATCTGCTCTCTAGCTCTCAACACCGCCATTCGCTGCTTTCTCCGCCGCCGCGGAGACGCCGATGAAAACCCAAGTGATACCCGGCAGGAGGAGCTTCGTGATGAGACGAAGCCGACGTTAGTGGACAAATTGAAGATGGCTCCGGCGTTGGTGTTCTCGGCGGAGATCAAGCCGAAACTCGCCGGTGCGGAGGCGGAGTGTACGATTTGTTTGACGGAATTCTCGGAAGGGGAAGAGATTCGTGTATTGGCGATTTGTAAGCACGGATTTCATGTTCAATGTATTCAAACATGGCTGATTTTGCATTCTTCTTGTCCGACTTGCCGCTGTAGCTACCTCCCTCCGTCACCGTCGTCCGCCGCACACGGCGGCGACGGCGACGGCGACCCCTGA

Coding sequence (CDS)

ATGCGGCCGACTCCTTTAGACGCCGACGACACCGTCAGCTTCCAGCCACCACCACCACCGCCACCGTGCCACGACCTCCGCGCTTGTACTTGGAGGCCGTACTCCAATTCCAGAGACTTCGAAGCCAACGCTGCTGTCGTAGTCATCATCCTTCTCTGCGGTCTCATCTGCTCTCTAGCTCTCAACACCGCCATTCGCTGCTTTCTCCGCCGCCGCGGAGACGCCGATGAAAACCCAAGTGATACCCGGCAGGAGGAGCTTCGTGATGAGACGAAGCCGACGTTAGTGGACAAATTGAAGATGGCTCCGGCGTTGGTGTTCTCGGCGGAGATCAAGCCGAAACTCGCCGGTGCGGAGGCGGAGTGTACGATTTGTTTGACGGAATTCTCGGAAGGGGAAGAGATTCGTGTATTGGCGATTTGTAAGCACGGATTTCATGTTCAATGTATTCAAACATGGCTGATTTTGCATTCTTCTTGTCCGACTTGCCGCTGTAGCTACCTCCCTCCGTCACCGTCGTCCGCCGCACACGGCGGCGACGGCGACGGCGACCCCTGA
Homology
[Close]
BLAST of CmoCh15G014060 vs. Swiss-Prot
Match: ATL79_ARATH (RING-H2 finger protein ATL79 OS=Arabidopsis thaliana GN=ATL79 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.3e-31
Identity = 71/146 (48.63%), Postives = 96/146 (65.75%), Query Frame = 1 

Query: 21  PPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICSLALNTAIRCFLRRRGDADENPS 80
           P C+    C W+PYSNS DF ANA+V++I+++  LIC+L+L  AIRCFLR   + +++  
Sbjct: 18  PTCNS-HTCRWKPYSNSTDFTANASVLLILVISALICALSLYAAIRCFLRPTLETEDDHK 77

Query: 81  DTRQEELRDETKPTLVDKLKMAPALVFSAEIKPKLAGAEAECTICLTEFSEGEEIRVLAI 140
                E    + PT        P LV+S+++  +LAGAEAEC ICL+EF +GE I+VL  
Sbjct: 78  P--DPEAAASSTPT-------TPTLVYSSDL--ELAGAEAECAICLSEFEQGESIQVLEK 137

Query: 141 CKHGFHVQCIQTWLILHSSCPTCRCS 167
           C+HGFHV+CI  WL   SSCPTCR S
Sbjct: 138 CQHGFHVKCIHKWLSTRSSCPTCRTS 151

[Close]
BLAST of CmoCh15G014060 vs. Swiss-Prot
Match: ATL73_ARATH (RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 8.7e-24
Identity = 63/148 (42.57%), Postives = 86/148 (58.11%), Query Frame = 1 

Query: 36  NSRDFEANAAVVVIILLCGLICSLALNTAIRCFLR--RRGDADENPSDTRQEELRDETKP 95
           N    + +  +++  LLC LIC+L +N+ +RC LR  RR   +E+P DT     +   K 
Sbjct: 33  NIASMDTHMVIILAALLCALICALGINSVLRCVLRCTRRFTPNEDPVDTNANVAKGIKKR 92

Query: 96  TLVDKLKMAPALVFSAEIKPKLAGAEAECTICLTEFSEGEEIRVLAICKHGFHVQCIQTW 155
            L    K+ P   +S E+K K      EC ICL +F EGE +RVL  C HGFHV+CI TW
Sbjct: 93  AL----KVIPVDSYSPELKMKAT----ECLICLGDFVEGETVRVLPKCNHGFHVKCIDTW 152

Query: 156 LILHSSCPTCRCSYLP-PSPSSAAHGGD 181
           L+ HSSCPTCR S L   +P++ +  GD
Sbjct: 153 LLSHSSCPTCRQSLLEHQTPANGSRRGD 172

[Close]
BLAST of CmoCh15G014060 vs. Swiss-Prot
Match: ATL72_ARATH (RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.4e-21
Identity = 63/147 (42.86%), Postives = 84/147 (57.14%), Query Frame = 1 

Query: 36  NSRDFEANAAVVVIILLCGLICSLALNTAIRCFLR--RRGDADENPSDTRQEE--LRDET 95
           N   F+ N  +++  LLC LIC+L+LN+A+RC LR  RR  +D+  S+       L    
Sbjct: 25  NDTYFDTNMVIILAALLCALICALSLNSALRCVLRITRRFTSDDQVSNASNANANLGRLA 84

Query: 96  KPTLVDK--LKMAPALVFSAEIKPKLAGAEAECTICLTEFSEGEEIRVLAICKHGFHVQC 155
             T + K  LK  P  ++ + I    A    EC ICL +F +GE++RVL  C HGFHV+C
Sbjct: 85  AATGLKKQALKQIPVGLYGSGIIDMKA---TECLICLGDFEDGEKVRVLPKCNHGFHVRC 144

Query: 156 IQTWLILHSSCPTCRCSYLPPSPSSAA 177
           I TWL+  SSCPTCR S L   PS  A
Sbjct: 145 IDTWLLSRSSCPTCRQSLLLEQPSPMA 168

[Close]
BLAST of CmoCh15G014060 vs. Swiss-Prot
Match: ATL78_ARATH (RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.6e-20
Identity = 61/152 (40.13%), Postives = 82/152 (53.95%), Query Frame = 1 

Query: 15  QPPPPPPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICSLALNTAIRCFLRRRGD 74
           Q P P P           PY    +F+AN  +V+ +LLC L+CSL LN+ IRC LR    
Sbjct: 37  QSPTPAPS----------PYVGDNNFDANVVMVLSVLLCALVCSLGLNSIIRCALRC--- 96

Query: 75  ADENPSDTRQEELRDETKPTLVDK--LKMAPALVFSAEIKPKLAGAEAECTICLTEFSEG 134
           ++  PS+   +        T V +  LK    + +S E+   L G + EC ICL+EF   
Sbjct: 97  SNLVPSEAGGDNYPVRLTNTGVKRKALKSFQTVSYSTELN--LPGLDTECAICLSEFVAE 156

Query: 135 EEIRVLAICKHGFHVQCIQTWLILHSSCPTCR 165
           E +++L  C HGFHV+CI  WL  HSSCPTCR
Sbjct: 157 ERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCR 173

[Close]
BLAST of CmoCh15G014060 vs. Swiss-Prot
Match: ATL77_ARATH (RING-H2 finger protein ATL77 OS=Arabidopsis thaliana GN=ATL77 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.6e-20
Identity = 56/134 (41.79%), Postives = 74/134 (55.22%), Query Frame = 1 

Query: 36  NSRDFEANAAVVVIILLCGLICSLALNTAIRC-FLRRRG----DADENPSDTRQEELRDE 95
           +  +   N  +++ ILLCG+ICSL L+  IRC F+R R     D    PS  R   +   
Sbjct: 44  DKNNLSGNVLMLLSILLCGIICSLGLHYIIRCAFIRSRSFMISDPISIPSTPRDSSVNKG 103

Query: 96  TKPTLVDKLKMAPALVFSAEIKPKLAGAEAECTICLTEFSEGEEIRVLAICKHGFHVQCI 155
            K      LKM P + +S EI   L G   EC ICL++F  GE++RVL  C HGFH++CI
Sbjct: 104 IKKKA---LKMLPVVNYSPEIN--LPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCI 163

Query: 156 QTWLILHSSCPTCR 165
             WL  H +CP CR
Sbjct: 164 DKWLTQHMTCPKCR 172

[Close]
BLAST of CmoCh15G014060 vs. TrEMBL
Match: A0A0A0KNJ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G146260 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 6.6e-87
Identity = 161/182 (88.46%), Postives = 173/182 (95.05%), Query Frame = 1 

Query: 1   MRPTPLDADDTVSFQPPPPPPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICSLA 60
           MRPTPLDADDTV FQPPP PP CHDLRACTWRPYS+SRDFEANAAVVVIILLCGLIC+LA
Sbjct: 1   MRPTPLDADDTVRFQPPPSPP-CHDLRACTWRPYSSSRDFEANAAVVVIILLCGLICALA 60

Query: 61  LNTAIRCFLRRRGDADENPSDTRQEELRDETKPTLVDKLKMAPALVFSAEIKPKLAGAEA 120
           LNTAIRCFLRRRG +D++ SD+RQEEL +ETKPTL+DKLKMAPALVFSAE+KPKLAGAEA
Sbjct: 61  LNTAIRCFLRRRGTSDDDSSDSRQEELPEETKPTLMDKLKMAPALVFSAEMKPKLAGAEA 120

Query: 121 ECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRCSYLPPSPSSAAHGGD 180
           ECTICLTEFSEGEEIRVL+ICKHGFHVQCIQTWLI HSSCPTCR SYLPPSPSS+A GGD
Sbjct: 121 ECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSASGGD 180

Query: 181 GD 183
           G+
Sbjct: 181 GN 181

[Close]
BLAST of CmoCh15G014060 vs. TrEMBL
Match: M5WVF0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011056mg PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 7.4e-38
Identity = 94/169 (55.62%), Postives = 109/169 (64.50%), Query Frame = 1 

Query: 16  PPPPPPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICSLALNTAIRCFLRRRGDA 75
           PPP          C W PYS S++FEANAA+V+IILL  LIC+L LN AIRCFLR  G  
Sbjct: 34  PPPTRQTTCVSHTCRWWPYSGSKEFEANAAMVIIILLSALICALGLNAAIRCFLRGGGSD 93

Query: 76  DEN-PSD---------TRQEELRDETKPTL--VDKLKMAPALVFSAEIKPKLAGAEAECT 135
           D N P D         T+QE ++ + K  +  V  L+ AP L +SAE+K  LAGAEAEC 
Sbjct: 94  DNNSPRDNDDSSHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECA 153

Query: 136 ICLTEFSEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRCSYLPPSP 173
           ICL+EF EGE IRVL  CKHGFH  CIQ WL  HSSCPTCR + LP SP
Sbjct: 154 ICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCLPQSP 202

[Close]
BLAST of CmoCh15G014060 vs. TrEMBL
Match: A0A061G1R4_THECC (RING-H2 finger protein ATL79, putative OS=Theobroma cacao GN=TCM_015567 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 7.4e-38
Identity = 100/191 (52.36%), Postives = 113/191 (59.16%), Query Frame = 1 

Query: 1   MRPTPLDADDTVSFQPPP-----------PPPPCHDLRACTWRPYSNSRDFEANAAVVVI 60
           MRP P +    +    PP               C+    C WRPYS+S DFEANAA+V+I
Sbjct: 1   MRPPPAETAQHLIHMSPPLSSGEPQLSSTSTSTCNP-HTCGWRPYSSSNDFEANAAMVLI 60

Query: 61  ILLCGLICSLALNTAIRCFLRRRGDADE-----NPSDTRQE-ELRDETKPTLVDKLKMAP 120
           IL C LICSLALN AIRCFLR  G         N   T+QE E R          +  AP
Sbjct: 61  ILFCALICSLALNAAIRCFLRGGGGRPRQFRHNNIPQTQQELEQRKPVPEVAAASMVAAP 120

Query: 121 ALVFSAEIKPKLAGAEAECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTC 175
            LV++  +  KLAGAEAEC ICL+EF EGE I+VLA CKHGFHVQCIQ WL  H SCPTC
Sbjct: 121 TLVYTTGL--KLAGAEAECAICLSEFVEGEGIQVLAKCKHGFHVQCIQQWLSSHFSCPTC 180

[Close]
BLAST of CmoCh15G014060 vs. TrEMBL
Match: A0A059CJF0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02538 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.3e-37
Identity = 97/204 (47.55%), Postives = 120/204 (58.82%), Query Frame = 1 

Query: 1   MRPTPLDADDTVSFQPPPPPPPCH------------DLRACTWRPYSNSRDFEANAAVVV 60
           MRP P    ++ +  PP P  P H            DL +C W PYS S DFEANAA+++
Sbjct: 1   MRPAP----ESSATSPPAPRTPRHLVPPQPLPATTCDLPSCRWHPYSASGDFEANAAMIL 60

Query: 61  IILLCGLICSLALNTAIRCFLRRRGDA----------DENPSDTRQEELRDETKPTLVDK 120
           I+LLCGLIC+LALNTAIRCFL   G             +   +  +EE   + +P L D 
Sbjct: 61  IVLLCGLICALALNTAIRCFLGGHGRGRPAAAHRRRPQQGQEEEEEEEEEQQPEPKLGDS 120

Query: 121 -LKMAPALVFSAEIKPKLAGAEAECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLILH 180
            L  APA+ ++  +  KLAG EAEC ICLTEF EG+ IRVLA C HGFHV+CI+ WL  H
Sbjct: 121 DLMAAPAVTYAPGVT-KLAGTEAECAICLTEFDEGDGIRVLATCSHGFHVECIERWLRSH 180

[Close]
BLAST of CmoCh15G014060 vs. TrEMBL
Match: B9I0N4_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0011s15100g PE=4 SV=2)

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-36
Identity = 96/183 (52.46%), Postives = 114/183 (62.30%), Query Frame = 1 

Query: 1   MRPTPLD---ADDTVSFQPPPP----PPPCH-DLRACTWRPYSNSRDFEANAAVVVIILL 60
           MRP PL+   A D     PPPP    PP C   + +C W PYSNS D  AN A +++ILL
Sbjct: 1   MRPAPLETTAAADISHLSPPPPLPSRPPSCDPQVHSCKWWPYSNSNDAGANTATILMILL 60

Query: 61  CGLICSLALNTAIRCFLRRRGDADENPSDTRQ-EELRDETKPTLVDKLKMAPALVFSAEI 120
           C LIC+LA NTAIR FLR   D D +    R+ EE R   K + +  L +A   V+ A +
Sbjct: 61  CALICALAFNTAIRWFLR--SDNDSSSDHLRELEEQRKPNKESDMALLVLATTQVYYAGM 120

Query: 121 KPKLAGAEAECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRCSYLPPS 175
             KLAGAEA+C ICL+EF EGE IRVL  C HGFHV C++ WL  HSSCPTCRCS L  S
Sbjct: 121 --KLAGAEADCAICLSEFVEGEGIRVLGRCNHGFHVHCVEKWLASHSSCPTCRCSCLASS 179

[Close]
BLAST of CmoCh15G014060 vs. TAIR10
Match: AT5G47610.1 (AT5G47610.1 RING/U-box superfamily protein)

HSP 1 Score: 136.0 bits (341), Expect = 2.4e-32
Identity = 71/146 (48.63%), Postives = 96/146 (65.75%), Query Frame = 1 

Query: 21  PPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICSLALNTAIRCFLRRRGDADENPS 80
           P C+    C W+PYSNS DF ANA+V++I+++  LIC+L+L  AIRCFLR   + +++  
Sbjct: 18  PTCNS-HTCRWKPYSNSTDFTANASVLLILVISALICALSLYAAIRCFLRPTLETEDDHK 77

Query: 81  DTRQEELRDETKPTLVDKLKMAPALVFSAEIKPKLAGAEAECTICLTEFSEGEEIRVLAI 140
                E    + PT        P LV+S+++  +LAGAEAEC ICL+EF +GE I+VL  
Sbjct: 78  P--DPEAAASSTPT-------TPTLVYSSDL--ELAGAEAECAICLSEFEQGESIQVLEK 137

Query: 141 CKHGFHVQCIQTWLILHSSCPTCRCS 167
           C+HGFHV+CI  WL   SSCPTCR S
Sbjct: 138 CQHGFHVKCIHKWLSTRSSCPTCRTS 151

[Close]
BLAST of CmoCh15G014060 vs. TAIR10
Match: AT4G17245.1 (AT4G17245.1 RING/U-box superfamily protein)

HSP 1 Score: 122.1 bits (305), Expect = 3.6e-28
Identity = 74/162 (45.68%), Postives = 90/162 (55.56%), Query Frame = 1 

Query: 12  VSFQPPPPPPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICSLALNTAIRCFLRR 71
           +S  P P         +C W+PYS+S DF ANA +++IIL C  IC L+L+ AIRC LR 
Sbjct: 5   LSSDPQPELTSTCTSHSCGWKPYSHSNDFAANAFLLLIILFCSFICVLSLHAAIRCCLRP 64

Query: 72  RGDADENPSDTRQEELRDETKPTLVDKLKMAPALVFSAEIKPKLAGAEAECTICLTEFSE 131
                  P D   E    +  PTLV     +P L         LAG EAEC ICL+EF +
Sbjct: 65  VLQHVPKP-DPDLEATHPDAPPTLV----YSPGL--------NLAGNEAECIICLSEFQD 124

Query: 132 GEEIRVLAICKHGFHVQCIQTWL-ILHSSCPTCRCSYLPPSP 173
           G+ +RVL  CKHGFHV CIQ WL   HSSCPTCR +     P
Sbjct: 125 GDTLRVLERCKHGFHVYCIQKWLSSSHSSCPTCRTNIFSSPP 153

[Close]
BLAST of CmoCh15G014060 vs. TAIR10
Match: AT5G05280.1 (AT5G05280.1 RING/U-box superfamily protein)

HSP 1 Score: 111.7 bits (278), Expect = 4.9e-25
Identity = 63/148 (42.57%), Postives = 86/148 (58.11%), Query Frame = 1 

Query: 36  NSRDFEANAAVVVIILLCGLICSLALNTAIRCFLR--RRGDADENPSDTRQEELRDETKP 95
           N    + +  +++  LLC LIC+L +N+ +RC LR  RR   +E+P DT     +   K 
Sbjct: 33  NIASMDTHMVIILAALLCALICALGINSVLRCVLRCTRRFTPNEDPVDTNANVAKGIKKR 92

Query: 96  TLVDKLKMAPALVFSAEIKPKLAGAEAECTICLTEFSEGEEIRVLAICKHGFHVQCIQTW 155
            L    K+ P   +S E+K K      EC ICL +F EGE +RVL  C HGFHV+CI TW
Sbjct: 93  AL----KVIPVDSYSPELKMKAT----ECLICLGDFVEGETVRVLPKCNHGFHVKCIDTW 152

Query: 156 LILHSSCPTCRCSYLP-PSPSSAAHGGD 181
           L+ HSSCPTCR S L   +P++ +  GD
Sbjct: 153 LLSHSSCPTCRQSLLEHQTPANGSRRGD 172

[Close]
BLAST of CmoCh15G014060 vs. TAIR10
Match: AT3G10910.1 (AT3G10910.1 RING/U-box superfamily protein)

HSP 1 Score: 104.4 bits (259), Expect = 7.8e-23
Identity = 63/147 (42.86%), Postives = 84/147 (57.14%), Query Frame = 1 

Query: 36  NSRDFEANAAVVVIILLCGLICSLALNTAIRCFLR--RRGDADENPSDTRQEE--LRDET 95
           N   F+ N  +++  LLC LIC+L+LN+A+RC LR  RR  +D+  S+       L    
Sbjct: 25  NDTYFDTNMVIILAALLCALICALSLNSALRCVLRITRRFTSDDQVSNASNANANLGRLA 84

Query: 96  KPTLVDK--LKMAPALVFSAEIKPKLAGAEAECTICLTEFSEGEEIRVLAICKHGFHVQC 155
             T + K  LK  P  ++ + I    A    EC ICL +F +GE++RVL  C HGFHV+C
Sbjct: 85  AATGLKKQALKQIPVGLYGSGIIDMKA---TECLICLGDFEDGEKVRVLPKCNHGFHVRC 144

Query: 156 IQTWLILHSSCPTCRCSYLPPSPSSAA 177
           I TWL+  SSCPTCR S L   PS  A
Sbjct: 145 IDTWLLSRSSCPTCRQSLLLEQPSPMA 168

[Close]
BLAST of CmoCh15G014060 vs. TAIR10
Match: AT1G49230.1 (AT1G49230.1 RING/U-box superfamily protein)

HSP 1 Score: 100.1 bits (248), Expect = 1.5e-21
Identity = 61/152 (40.13%), Postives = 82/152 (53.95%), Query Frame = 1 

Query: 15  QPPPPPPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICSLALNTAIRCFLRRRGD 74
           Q P P P           PY    +F+AN  +V+ +LLC L+CSL LN+ IRC LR    
Sbjct: 37  QSPTPAPS----------PYVGDNNFDANVVMVLSVLLCALVCSLGLNSIIRCALRC--- 96

Query: 75  ADENPSDTRQEELRDETKPTLVDK--LKMAPALVFSAEIKPKLAGAEAECTICLTEFSEG 134
           ++  PS+   +        T V +  LK    + +S E+   L G + EC ICL+EF   
Sbjct: 97  SNLVPSEAGGDNYPVRLTNTGVKRKALKSFQTVSYSTELN--LPGLDTECAICLSEFVAE 156

Query: 135 EEIRVLAICKHGFHVQCIQTWLILHSSCPTCR 165
           E +++L  C HGFHV+CI  WL  HSSCPTCR
Sbjct: 157 ERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCR 173

[Close]
BLAST of CmoCh15G014060 vs. NCBI nr
Match: gi|449456456|ref|XP_004145965.1| (PREDICTED: RING-H2 finger protein ATL79-like [Cucumis sativus])

HSP 1 Score: 328.2 bits (840), Expect = 9.4e-87
Identity = 161/182 (88.46%), Postives = 173/182 (95.05%), Query Frame = 1 

Query: 1   MRPTPLDADDTVSFQPPPPPPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICSLA 60
           MRPTPLDADDTV FQPPP PP CHDLRACTWRPYS+SRDFEANAAVVVIILLCGLIC+LA
Sbjct: 1   MRPTPLDADDTVRFQPPPSPP-CHDLRACTWRPYSSSRDFEANAAVVVIILLCGLICALA 60

Query: 61  LNTAIRCFLRRRGDADENPSDTRQEELRDETKPTLVDKLKMAPALVFSAEIKPKLAGAEA 120
           LNTAIRCFLRRRG +D++ SD+RQEEL +ETKPTL+DKLKMAPALVFSAE+KPKLAGAEA
Sbjct: 61  LNTAIRCFLRRRGTSDDDSSDSRQEELPEETKPTLMDKLKMAPALVFSAEMKPKLAGAEA 120

Query: 121 ECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRCSYLPPSPSSAAHGGD 180
           ECTICLTEFSEGEEIRVL+ICKHGFHVQCIQTWLI HSSCPTCR SYLPPSPSS+A GGD
Sbjct: 121 ECTICLTEFSEGEEIRVLSICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSASGGD 180

Query: 181 GD 183
           G+
Sbjct: 181 GN 181

[Close]
BLAST of CmoCh15G014060 vs. NCBI nr
Match: gi|659074211|ref|XP_008437481.1| (PREDICTED: RING-H2 finger protein ATL79-like [Cucumis melo])

HSP 1 Score: 327.8 bits (839), Expect = 1.2e-86
Identity = 160/182 (87.91%), Postives = 173/182 (95.05%), Query Frame = 1 

Query: 1   MRPTPLDADDTVSFQPPPPPPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICSLA 60
           MRPTPLDAD+TV FQPPP PP CHDLRACTWRPYSNSRDFEANAAVVVIILLCGLIC+LA
Sbjct: 1   MRPTPLDADETVRFQPPPSPP-CHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICALA 60

Query: 61  LNTAIRCFLRRRGDADENPSDTRQEELRDETKPTLVDKLKMAPALVFSAEIKPKLAGAEA 120
           LNTAIRCFLRRRG +D++ +D+RQEEL++ETKPTLV+KLKMAPALVFSAE+KPKLAGAEA
Sbjct: 61  LNTAIRCFLRRRGTSDDDSNDSRQEELQEETKPTLVEKLKMAPALVFSAEMKPKLAGAEA 120

Query: 121 ECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRCSYLPPSPSSAAHGGD 180
           ECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLI HSSCPTCR SYLPPSPSS+  GGD
Sbjct: 121 ECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLISHSSCPTCRRSYLPPSPSSSVSGGD 180

Query: 181 GD 183
           G+
Sbjct: 181 GN 181

[Close]
BLAST of CmoCh15G014060 vs. NCBI nr
Match: gi|694360849|ref|XP_009360247.1| (PREDICTED: RING-H2 finger protein ATL79-like [Pyrus x bretschneideri])

HSP 1 Score: 180.3 bits (456), Expect = 3.2e-42
Identity = 93/166 (56.02%), Postives = 114/166 (68.67%), Query Frame = 1 

Query: 17  PPPPPPCHDLRACTWRPYSNSRDFEANAAVVVIILLCGLICSLALNTAIRCFLR----RR 76
           PP  P   D  AC W PYS S++FEANAA+++I+LLC LIC+L LN AIRCFLR      
Sbjct: 29  PPAGPTTCDSHACRWWPYSGSKEFEANAAMIIIVLLCALICALGLNAAIRCFLRGGSTNP 88

Query: 77  GDADENPSDTRQEELRDETKPTLVDK---LKMAPALVFSAEIKPKLAGAEAECTICLTEF 136
            D   N +  RQ+EL D  + + V     L+ APA++++AE+K KLAG EAEC ICL+EF
Sbjct: 89  SDRQNNSAPQRQQELVDVQQKSNVAAAKCLEAAPAVIYTAEMKAKLAGVEAECAICLSEF 148

Query: 137 SEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRCSYLPPSPSSA 176
            EGE IRV+  CKHGFH QCIQ WL  HSSCPTCR + LP SPS +
Sbjct: 149 EEGEGIRVIGRCKHGFHAQCIQEWLSSHSSCPTCRRTCLPQSPSQS 194

[Close]
BLAST of CmoCh15G014060 vs. NCBI nr
Match: gi|658023180|ref|XP_008346994.1| (PREDICTED: RING-H2 finger protein ATL79-like [Malus domestica])

HSP 1 Score: 175.3 bits (443), Expect = 1.0e-40
Identity = 92/175 (52.57%), Postives = 115/175 (65.71%), Query Frame = 1 

Query: 12  VSFQPPPPPPPCHDL----RACTWRPYSNSRDFEANAAVVVIILLCGLICSLALNTAIRC 71
           +   PP P PP         AC W PYS S++FEANAA+++I+LLC LIC+L LN AIRC
Sbjct: 20  IHLSPPLPSPPAGPTTCGSHACRWWPYSGSKEFEANAAMIIIVLLCALICALGLNAAIRC 79

Query: 72  FLR----RRGDADENPSDTRQEELRDETKPTLVDK---LKMAPALVFSAEIKPKLAGAEA 131
           F+R       D   N +  RQ+ L D  + + V     L+ APA++++AE+K KLAG EA
Sbjct: 80  FVRGGSTNPSDRQNNSAPQRQQALVDVQQKSNVAAAKCLEAAPAVIYTAEMKAKLAGVEA 139

Query: 132 ECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLILHSSCPTCRCSYLPPSPSSA 176
           EC ICL+EF EGE IRV+  CKHGFH QCIQ WL  HSSCPTCR + LP SPS +
Sbjct: 140 ECAICLSEFVEGEGIRVIGRCKHGFHAQCIQEWLSSHSSCPTCRRTCLPQSPSQS 194

[Close]
BLAST of CmoCh15G014060 vs. NCBI nr
Match: gi|694396836|ref|XP_009373686.1| (PREDICTED: RING-H2 finger protein ATL79-like [Pyrus x bretschneideri])

HSP 1 Score: 166.8 bits (421), Expect = 3.6e-38
Identity = 100/198 (50.51%), Postives = 123/198 (62.12%), Query Frame = 1 

Query: 1   MRPTP---LDADDTVSF-----QPPPPPPPCHDL----RACTWRPYSNSRDFEANAAVVV 60
           MRP P   L A + V F      PP P PP          C W PYS S++FEANAA+++
Sbjct: 1   MRPQPTVRLSAGEVVEFGLIHFSPPLPSPPTGPTTCVSHTCRWWPYSGSKEFEANAAMII 60

Query: 61  IILLCGLICSLALNTAIRCFLRR-RGDADENPSD--------TRQE--ELRDETKPTLVD 120
           I+LL  LI +L LN AIRCFLR  RG    NPSD        +RQE  +++ ++      
Sbjct: 61  IVLLSALISALGLNAAIRCFLRGGRG----NPSDRENNSVPQSRQELVDVQHKSNVATAS 120

Query: 121 KLKMAPALVFSAEIKPKLAGAEAECTICLTEFSEGEEIRVLAICKHGFHVQCIQTWLILH 176
            L+ AP ++++AE+K KLAG EAEC ICL+EF EGE IRVL  CKHGFH QCIQ WL  H
Sbjct: 121 CLEAAPTVIYTAEMKAKLAGVEAECAICLSEFVEGEGIRVLRRCKHGFHAQCIQKWLSSH 180

The following BLAST results are available for this feature:
BLAST of CmoCh15G014060 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATL79_ARATH4.3e-3148.63RING-H2 finger protein ATL79 OS=Arabidopsis thaliana GN=ATL79 PE=2 SV=1[more]
ATL73_ARATH8.7e-2442.57RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2 SV=1[more]
ATL72_ARATH1.4e-2142.86RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2 SV=1[more]
ATL78_ARATH2.6e-2040.13RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2 SV=1[more]
ATL77_ARATH7.6e-2041.79RING-H2 finger protein ATL77 OS=Arabidopsis thaliana GN=ATL77 PE=2 SV=1[more]
BLAST of CmoCh15G014060 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNJ7_CUCSA6.6e-8788.46Uncharacterized protein OS=Cucumis sativus GN=Csa_5G146260 PE=4 SV=1[more]
M5WVF0_PRUPE7.4e-3855.62Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011056mg PE=4 SV=1[more]
A0A061G1R4_THECC7.4e-3852.36RING-H2 finger protein ATL79, putative OS=Theobroma cacao GN=TCM_015567 PE=4 SV=... [more]
A0A059CJF0_EUCGR1.3e-3747.55Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02538 PE=4 SV=1[more]
B9I0N4_POPTR1.1e-3652.46Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0011s15100g P... [more]
BLAST of CmoCh15G014060 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G47610.12.4e-3248.63 RING/U-box superfamily protein[more]
AT4G17245.13.6e-2845.68 RING/U-box superfamily protein[more]
AT5G05280.14.9e-2542.57 RING/U-box superfamily protein[more]
AT3G10910.17.8e-2342.86 RING/U-box superfamily protein[more]
AT1G49230.11.5e-2140.13 RING/U-box superfamily protein[more]
BLAST of CmoCh15G014060 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449456456|ref|XP_004145965.1|9.4e-8788.46PREDICTED: RING-H2 finger protein ATL79-like [Cucumis sativus][more]
gi|659074211|ref|XP_008437481.1|1.2e-8687.91PREDICTED: RING-H2 finger protein ATL79-like [Cucumis melo][more]
gi|694360849|ref|XP_009360247.1|3.2e-4256.02PREDICTED: RING-H2 finger protein ATL79-like [Pyrus x bretschneideri][more]
gi|658023180|ref|XP_008346994.1|1.0e-4052.57PREDICTED: RING-H2 finger protein ATL79-like [Malus domestica][more]
gi|694396836|ref|XP_009373686.1|3.6e-3850.51PREDICTED: RING-H2 finger protein ATL79-like [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G014060.1CmoCh15G014060.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 121..164
score: 1.3
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 122..163
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 122..164
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 119..165
score: 3.7
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 32..164
score: 4.4
NoneNo IPR availablePANTHERPTHR14155:SF74RING-H2 FINGER PROTEIN ATL45-RELATEDcoord: 32..164
score: 4.4
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 121..170
score: 7.61